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Gene: Phf20 (PHD finger protein 20) Rattus norvegicus

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Symbol:

Phf20

Name:

PHD finger protein 20

RGD ID:

1305020

Description:

Predicted to enable DNA binding activity and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in cytosol; nuclear membrane; and nucleoplasm. Predicted to be part of MLL1 complex and NSL complex. Orthologous to human PHF20 (PHD finger protein 20); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC311575; LOC311575; RGD1305020; similar to Hepatocellular carcinoma-associated antigen 58 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PHF20 (PHD finger protein 20)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Phf20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Phf20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PHF20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PHF20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Phf20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PHF20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PHF20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Phf20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Phf20 (PHD finger protein 20)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	PHF20 (PHD finger protein 20)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Phf20 (PHD finger protein 20)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phf20a (PHD finger protein 20, a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	phf20a (PHD finger protein 20, a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	phf20b (PHD finger protein 20, b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	CTI6	Alliance	DIOPT (OrthoFinder\|OrthoInspector)
Drosophila melanogaster (fruit fly):	MBD-R2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	phf20	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	165,170,337 - 165,279,276 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,170,405 - 165,274,526 (+)	Ensembl				GRCr8
mRatBN7.2	3	144,710,253 - 144,816,696 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,710,353 - 144,814,439 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	148,576,033 - 148,681,300 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,193,304 - 157,298,602 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,932,822 - 155,038,021 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	152,273,269 - 152,379,742 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	152,294,656 - 152,377,170 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	159,311,039 - 159,417,512 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,601,763 - 146,707,185 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	143,432,023 - 143,537,366 (+)	NCBI		Celera
RGSC_v3.1	3	146,529,026 - 146,611,653 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Dwarfism (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

3,4-methylenedioxymethamphetamine (EXP)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

cobalt dichloride (ISO)

copper(II) sulfate (ISO)

ethanol (ISO)

fipronil (EXP)

flutamide (EXP)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

lead(0) (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

oxaliplatin (EXP)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (EXP)

tungsten (ISO)

valproic acid (ISO)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin organization (IEA)

DNA-templated transcription (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

histone acetyltransferase complex (IEA,ISO)

MLL1 complex (IBA,IEA,ISO)

NSL complex (IBA)

nuclear membrane (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IEA)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:15960975	PMID:20018852

Genomics

Comparative Map Data

Phf20
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	165,170,337 - 165,279,276 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	165,170,405 - 165,274,526 (+)	Ensembl				GRCr8
mRatBN7.2	3	144,710,253 - 144,816,696 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	144,710,353 - 144,814,439 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	148,576,033 - 148,681,300 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	157,193,304 - 157,298,602 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	154,932,822 - 155,038,021 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	152,273,269 - 152,379,742 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	152,294,656 - 152,377,170 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	159,311,039 - 159,417,512 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	146,601,763 - 146,707,185 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	143,432,023 - 143,537,366 (+)	NCBI		Celera
RGSC_v3.1	3	146,529,026 - 146,611,653 (+)	NCBI
Cytogenetic Map	3	q42	NCBI

PHF20
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	35,772,015 - 35,950,370 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	35,771,968 - 35,950,385 (+)	Ensembl			hg38	GRCh38
GRCh37	20	34,359,937 - 34,538,292 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	33,823,337 - 34,001,702 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	20	31,108,215 - 31,286,573 (+)	NCBI		Celera
Cytogenetic Map	20	q11.22-q11.23	NCBI
HuRef	20	31,137,752 - 31,316,089 (+)	NCBI		HuRef
CHM1_1	20	34,261,851 - 34,440,268 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	37,493,003 - 37,671,367 (+)	NCBI		T2T-CHM13v2.0

Phf20
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	156,038,567 - 156,151,873 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	156,038,386 - 156,151,872 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	156,196,647 - 156,309,953 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	156,196,466 - 156,309,952 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	156,022,383 - 156,135,689 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	155,887,907 - 156,001,394 (+)	NCBI		MGSCv36	mm8
Celera	2	162,132,013 - 162,246,266 (+)	NCBI		Celera
Cytogenetic Map	2	H1	NCBI
cM Map	2	77.38	NCBI

Phf20
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	25,563,511 - 25,688,546 (-)	Ensembl
ChiLan1.0	NW_004955422	25,563,511 - 25,688,546 (-)	NCBI	ChiLan1.0	ChiLan1.0

PHF20
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	41,504,156 - 41,688,368 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	41,530,988 - 41,681,468 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	32,099,066 - 32,283,298 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	33,252,044 - 33,404,375 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	33,253,482 - 33,401,629 (+)	Ensembl			panPan2	panpan1.1

PHF20
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	24,674,706 - 24,821,286 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	24,674,797 - 24,821,269 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	24,319,249 - 24,467,770 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	25,366,727 - 25,513,543 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	25,366,769 - 25,513,532 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	24,653,196 - 24,799,231 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	24,748,573 - 24,893,567 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	25,187,513 - 25,383,254 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Phf20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	173,651,345 - 173,793,997 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936561	4,953,426 - 5,082,223 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936561	4,955,548 - 5,082,154 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PHF20
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	39,092,839 - 39,242,563 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	39,092,796 - 39,242,573 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	44,564,949 - 44,618,256 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PHF20
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	56,710,310 - 56,810,249 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	56,710,316 - 56,807,497 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666087	3,107,613 - 3,294,555 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Phf20
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624842	3,520,994 - 3,669,584 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Phf20
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	135,553,830 - 135,658,973 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Phf20
856 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	630
Count of miRNA genes:	274
Interacting mature miRNAs:	336
Transcripts:	ENSRNOT00000027067
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	141508991	166376254	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	122395989	167395989	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	98651826	167012663	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	160357340	167835660	Rat

Markers in Region

BI301404

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,747,875 - 144,748,057 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,310,885 - 152,311,066	NCBI	Rnor6.0
Rnor_5.0	3	159,379,715 - 159,379,896	UniSTS	Rnor5.0
RGSC_v3.4	3	146,639,380 - 146,639,561	UniSTS	RGSC3.4
Celera	3	143,469,640 - 143,469,821	UniSTS
RH 3.4 Map	3	1326.0	UniSTS
Cytogenetic Map	3	q42	UniSTS

RH128579

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	144,815,623 - 144,815,841 (+)	MAPPER	mRatBN7.2
mRatBN7.2	8	52,254,440 - 52,254,658 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	152,378,674 - 152,378,891	NCBI	Rnor6.0
Rnor_6.0	8	56,359,521 - 56,359,738	NCBI	Rnor6.0
Rnor_5.0	3	159,311,890 - 159,312,107	UniSTS	Rnor5.0
Rnor_5.0	8	54,944,107 - 54,944,324	UniSTS	Rnor5.0
RGSC_v3.4	3	146,707,162 - 146,707,379	UniSTS	RGSC3.4
RGSC_v3.4	8	55,277,285 - 55,277,502	UniSTS	RGSC3.4
Celera	3	143,537,343 - 143,537,560	UniSTS
Cytogenetic Map	3	q42	UniSTS

BG377325

Rat Assembly	Chr	Position (strand)	Source	JBrowse
RH 3.4 Map	10	859.3	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105086	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063283850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ228046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ231010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ232914	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000027067 ⟹ ENSRNOP00000027067

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	165,170,405 - 165,274,526 (+)	Ensembl
mRatBN7.2 Ensembl	3	144,710,353 - 144,814,439 (+)	Ensembl
Rnor_6.0 Ensembl	3	152,294,656 - 152,377,170 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095858 ⟹ ENSRNOP00000090317

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	144,770,728 - 144,814,439 (+)	Ensembl

RefSeq Acc Id:

NM_001107795 ⟹ NP_001101265

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,170,337 - 165,275,755 (+)	NCBI
mRatBN7.2	3	144,710,253 - 144,815,647 (+)	NCBI
Rnor_6.0	3	152,273,269 - 152,378,697 (+)	NCBI
Rnor_5.0	3	159,311,039 - 159,417,512 (-)	NCBI
RGSC_v3.4	3	146,601,763 - 146,707,185 (+)	RGD
Celera	3	143,432,023 - 143,537,366 (+)	RGD

Sequence:

show sequence

GGCTGTGGAGCGGCTGCGTCACTCGGTGGTGGAGATGGTGCGTGTGTGTGGGGGGCGGGGGATA
CGCTGGGCGCGTCCCCGGGGTCACGTGGTGCGCAGCGCGCACAGTCCTTCTGTCGGTTGGTCTG
GAGCGGCGCAGCAGGAGCGGGGCCGTGAGGAGAATAAAAGCAGCCCCGTTGATGACTGAAAATG
ACCAAGCACCCACCTAACAGACGAGGAATCAGCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGG
ACCGTTTAAAAAACTGGTATCCGGCTCATATTGAAGACATTGACTACGAAGAAGGGAGAGTCCT
CATCCATTTCAAGCGGTGGAACCATCGTTACGATGAGTGGTTTTGTTGGGACAGTCCTTATCTG
CGTCCTTTAGAGAAGATACAGCTGAGGAAAGAGGGTTTGCATGAAGAGGATGGATCTTCTGAAT
TTCAAATAAACCAGCAAGTGCTTGCTTGCTGGTCTGACTGTCGATTTTATCCAGCCAGAGTCAC
TGCTGTGAACAAGGATGGTACTTACACTGTGAAATTTTATGATGGAGTAGTTCAAACTGTCAAA
CATATTCATGTCAAAGCTTTTTCCAAAGATCAGAATATTGTGGGTAATGCTAGGCCTAAAGAAA
CAGATCACAAAAGTCTTTCATCGTCTCCTGAGAAACGAGAGAAGTTTAAAGAACAGAGAAAAGC
CACGGTCAATGTGAAGAAAAACCAAGTGGAAAAAGCCTTAAAGACAGAAAAGCGGCCCAAACCG
CCCGACAAAGAGGGAAAGCTGACCTGCCCAGAAAAGGGCAGAGTGTCAGAGAAAAGCCTTCCCA
AGAACGAGAAGGAAGATAAGGAAAACATTTCTGAGAACGAGCGGGAGTATTCTGGGGATGCCCA
GGTGGACAAGAAGCCCGAGAAAGACCTTGTGAAGAGTCCACAAGAGACCCTGAAGGAGCCAAAA
AGAAAACGAGGCAGACCCCCTTCCATAACTCCTACTGCTGTGGATTCAAATTCTCAAACTTTGC
AACCAATAACATTGGAATTGAGAAGACGGAAAATATCAAAACGAAGTGATACCCCATTAAAGCG
CCCCCGACTTGACAAAAATTCATCCCAGGAACAGTCAAAAAAACGCTCTGAAAACAGTGACAAA
GACTTATCCAGAAGACGGTCCTCCAGGCTGTCCACTAATGGGACCCGTGAGACCCTAGATCCCG
ACCTGATTGTACCTGATCTGGTTCATACGGTTGATACGAACCCTCTACAGGACAAGTCACCCAG
TGCCAAGGAATCTGCTGAAGGTCAGTTGGAGTCTCCATTGGAAGCTGGCCAGGTGTCTTCTGCA
TTAACTTGCCACCCCATCGGGGATGGCCTGGGGGCTGCAGACTTGGAGTTGAACTGCAAGTCAA
TGGGAGAGAACACGATGAAAACAGAACCGGTGTCTCCGCCTGCCGAGGTGCAGGAAGATTCCGC
TGCTGAAGTTCCAAACACTTTGAAGAAAGCGGGTGACTTTGTGAAGTTGCATGCGCCAGCTGTG
GACCTGGACCACAAGTTTCGATGCAAGGTTGTGGACTGTTTGAAGTTCTTCCGCAAGGCTAAAC
TGCTGCACTATCACATGAAGTACTTCCATGGAATGGAGAAGTCACCAGAGCCAGAGGACGGGTC
AGGGAGGACGCATGTACAGACTCGGGGCTCTACAGTGCCTGATAAGGCCAGCCAGGAGAGCCTG
CCCCGGAAGCGGATCTCGGCCAGCTCCCCAACTGCCAAAGAGAAGGAAAAGAATAAAGAGAAGA
AATTCAAAGAACTTGTGAGAGTGAAGCCAAAGAAGAAAAAGAAAAAGAAAAAGAAAACCAAGCC
TGAATGTCCCTGCAGTGAGGACATCAGTGATACCTCCCAGGAACCTTCTCCACCCAAAACGTTT
GCTGTCACCAGGTGCGGGTCCTCACACAAGCCTGCGGTCCATATGAGCCCGCAGCTCCATGGTT
CAGATACTGGAAACCACAAAGGGAAATTGAAAGCATGTGAGGAGGATAATTTGAGCGAGTCCTC
TTCCGAGAGCTTTCTTTGGAGTGATGAGGAATACGGTCAAGATGTTGATGTGACCACCAACCCA
GATGAGGAGCTTGAAGGCGACGACCGCTATGACTTTGAGGTGGTCCGATGCATCTGTGGAGTGC
AGGAGGAAAATGACTTTATGATTCAGTGTGAAGAATGCCAGTGCTGGCAGCACGGGGTCTGCAT
GGGATTACTGGAAGAAAATGTGCCCGAGAAATACACCTGCTACGTTTGCCAAGACCCTCCAGGT
CAGAGGCCTGGCTTCAAGTACTGGTATGACAAGGAGTGGCTGAGCCGGGGACATATGCATGGTC
TGGCATTTCTAGAAGAGAACTACTCCCATCAGAATGCCAAGAAGATTGTGGCCACCCATCAGCT
TCTCGGGGATGTTCAGAGAGTGATTGAAGTTCTGCACGGCTTGCAGCTCAAGATGAGCATCCTG
CAAAGCAGGGAGCATCCTGATCTGCAGCTATGGTGCCAGCCCTGGAAACAGCACTCAGGGGAAG
GGAGAGCACATTCCAGACACATCCACATCACAGACGCCAGGAGCGAGGAGTCCCCAAGCTATAG
AACTTTGAATGGGGCGGTGGAGAAGCCATCGCCCCTGCCCCGGTCTGTAGAGGAGTCTTACATC
ACCAGTGAGCATTGCTACCAGAAACCCCGCGCCTATTACCCCGCTGTGGAGCAGAAGCTGGTAG
TGGAGACAAGAGGCTCTGCCCTTGATGATGCAGTCAGCCCCCTCTGTGAGAATGGTGACGACCC
CCTCTCCCCTCGCCTAGGCTGGCCCATCGACCAAGATAGGAGCAGAGGGGACATCGATCCCAAA
CCCAGCTCCCCAAAGGTGAGGGAATGCATTCCCAAGAAGGTCTTGCTAGAAGAAACCCCTGCTC
GGAAGCTGCTGGACAGAGGTGGAGAAGGGCTGGTGAGCTCTCAGCACCAGTGGCAGTTTAACCT
GCTGACACATGTGGAGTCTCTTCAGGATGAAGTAACACATCGGATGGACTCCATTGAGAAGGAG
CTGGACGTGCTGGAGAGCTGGCTGGACTACACTGGGGAACTGGAGCCCCCAGAGCCACTGGCCA
GGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACTGACCTGGGCAAGGTGCAGCAGAT
TGCCCTCTGCTGCTCAACATGAAGCTGGGCACCCAAGACATTGGAGCACAATCCTGGCATGTCT
GCCAGGGGGCTTCGCATATTTAAGTAAATAAACTAAGCATGCTGAATGCACGTGACACTGACTG
ACTTCAGGGATTTAGCCAGGAGTGTGATGGACATTGGGACAAAGAGACCATTTTGGCTGCTGGA
GGACGGGGCACTCTTGATCTGGAAGCCGACTGCAAAGGCAGCCCATAGTCTTAGAATCCCCTTC
TGTGCACATTGTTGAACGAAGCAAGTCTTTGCACATCTTCAATTGGAATCGTGCCACTGATGAT
AAACAAAATGAGAGCCAAAAAAAAAAAATCTAGTAGAAAACAGTTGTAAATTCAATTTGCAGTT
TATTTAATTGACTTTTGAGTCAGGTAGAGGCATGTGCCAACCCCTCTGGTTTCTCTGCCTGGTG
TGGCGTGTGTGCAGCAGGCAGCGACTGCTCTCATCCCTCAGCCTCACTGGAACGTTGGGACTTC
ACTGTGCCATGCAGTTTTCCAAGGCTGGGGCCCGACTGCTCTGCTTCCTCAAGACTTCATTTTC
TCACCTCGACTCTTGCATGGTTTCACGGTACCAGGGACAAGTTTTTATGTTTTTACTCCAGAGT
CTGCTGGGCTGTGGTTTTGACAGCCAAGTGAAACTGCTGAAGGAGGAGCTAGAATCTTGATGGA
ATGAGAATCTACAAGGAATTCCAGAAGGAAGCAGTCAGGGTCTGGAACCCAAAGGACAGCATTT
TCTACCCACTTATTAAATTCAATAGCTTCCCAGTTCTATTTAAAGTTATGAAGAAAACGTTTCT
CAAAATTTTTGAACTCTTTTACTGTAAAGATTTGTTACAAAGAACTTGGGAGTTATTTTACGTC
GTCATCATCAGCAAACTTGCAATTCTATATGTAGTCTCCCTCCTCCCTGGAGGCTGGGGTAGCA
GTTGCCGCTACACTGTAACACTTTAAGTCCCCGTCTGTATTACTTTGTGAGATGAAGGTAATTA
TGCTGCTTACAGTCCAGGTACAGTCTGTTTGTACCTTCAGAGAGATTTGTGTTGTCGCAGGCTC
TGGTTCCATGTGTCATTGCTGTGTCTTTTGGTTGGTTTTATCATACTAGGCAAAAGGTAAGAGG
TTCCGTGCTGTGAGGACTTCATTTTTTGCATCACTAACGGTAAACTTTGTTTGATTTATCCATC
AACACCCACCGGTTCATTATCAGTTTTGGAATCTGTAATGTTCTAGGCTGCAAATATTTACTAT
GTAACCATCAAGGAGCCGAGGTCAGTAGTTCCCAACAGCAGCACCTCTAGCTGCCTTGGGAGTG
GTTTCGTTTCAGGCTCAACAGGCCATTGTGGCCATAAATTCAGGCTTATGTACAGAGAAGTTTC
AGGGAATGGATGCCTTGTCTAAAGATCTGTCTACCATTTGATATAAAGTGAGCTGTGGGGCAAG
CATATAGGGACTGTGTGACATGCAGTGACGCCAACACAGTCCCTTACAAGAGGCTGCTTCCCAC
TTCTCACATTGAT

hide sequence

RefSeq Acc Id:

XM_006235404 ⟹ XP_006235466

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,170,346 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,710,270 - 144,816,696 (+)	NCBI
Rnor_6.0	3	152,273,298 - 152,379,742 (+)	NCBI
Rnor_5.0	3	159,311,039 - 159,417,512 (-)	NCBI

Sequence:

show sequence

TGGAGATGGTGCGTGTGTGTGGGGGGCGGGGGATACGCTGGGCGCGTCCCCGGGGTCACGTGGT
GCGCAGCGCGCACAGTCCTTCTGTCGGTTGGTCTGGAGCGGCGCAGCAGGAGCGGGGCCGTGAG
TTAAAAGAGAGAGGAACAAAGGACTTCCATTTTGTGTTGCGTCACATGCTTGCCCGATGCCCAC
AGAGCTCACAAGAGGGGGTTGGATTCCTTGGAACTGAAGTTGCAGTTCATCGAGAATAAAAGCA
GCCCCGTTGATGACTGAAAATGACCAAGCACCCACCTAACAGACGAGGAATCAGCTTTGAAGTG
GGAGCCCAGTTGGAAGCCCGGGACCGTTTAAAAAACTGGTATCCGGCTCATATTGAAGACATTG
ACTACGAAGAAGGGAGAGTCCTCATCCATTTCAAGCGGTGGAACCATCGTTACGATGAGTGGTT
TTGTTGGGACAGTCCTTATCTGCGTCCTTTAGAGAAGATACAGCTGAGGAAAGAGGGTTTGCAT
GAAGAGGATGGATCTTCTGAATTTCAAATAAACCAGCAAGTGCTTGCTTGCTGGTCTGACTGTC
GATTTTATCCAGCCAGAGTCACTGCTGTGAACAAGGATGGTACTTACACTGTGAAATTTTATGA
TGGAGTAGTTCAAACTGTCAAACATATTCATGTCAAAGCTTTTTCCAAAGATCAGAATATTGTG
GGTAATGCTAGGCCTAAAGAAACAGATCACAAAAGTCTTTCATCGTCTCCTGAGAAACGAGAGA
AGTTTAAAGAACAGAGAAAAGCCACGGTCAATGTGAAGAAAAACCAAGTGGAAAAAGCCTTAAA
GACAGAAAAGCGGCCCAAACCGCCCGACAAAGAGGGAAAGCTGACCTGCCCAGAAAAGGGCAGA
GTGTCAGAGAAAAGCCTTCCCAAGAACGAGAAGGAAGATAAGGAAAACATTTCTGAGAACGAGC
GGGAGTATTCTGGGGATGCCCAGGTGGACAAGAAGCCCGAGAAAGACCTTGTGAAGAGTCCACA
AGAGACCCTGAAGGAGCCAAAAAGAAAACGAGGCAGACCCCCTTCCATAACTCCTACTGCTGTG
GATTCAAATTCTCAAACTTTGCAACCAATAACATTGGAATTGAGAAGACGGAAAATATCAAAAC
GAAGTGATACCCCATTAAAGCGCCCCCGACTTGACAAAAATTCATCCCAGGAACAGTCAAAAAA
ACGCTCTGAAAACAGTGACAAAGACTTATCCAGAAGACGGTCCTCCAGGCTGTCCACTAATGGG
ACCCGTGAGACCCTAGATCCCGACCTGATTGTACCTGATCTGGTTCATACGGTTGATACGAACC
CTCTACAGGACAAGTCACCCAGTGCCAAGGAATCTGCTGAAGGTCAGTTGGAGTCTCCATTGGA
AGCTGGCCAGGTGTCTTCTGCATTAACTTGCCACCCCATCGGGGATGGCCTGGGGGCTGCAGAC
TTGGAGTTGAACTGCAAGTCAATGGGAGAGAACACGATGAAAACAGAACCGGTGTCTCCGCCTG
CCGAGGTGCAGGAAGATTCCGCTGCTGAAGTTCCAAACACTTTGAAGAAAGCGGGTGACTTTGT
GAAGTTGCATGCGCCAGCTGTGGACCTGGACCACAAGTTTCGATGCAAGGTTGTGGACTGTTTG
AAGTTCTTCCGCAAGGCTAAACTGCTGCACTATCACATGAAGTACTTCCATGGAATGGAGAAGT
CACCAGAGCCAGAGGACGGGTCAGGGAGGACGCATGTACAGACTCGGGGCTCTACAGTGCCTGA
TAAGGCCAGCCAGGAGAGCCTGCCCCGGAAGCGGATCTCGGCCAGCTCCCCAACTGCCAAAGAG
AAGGAAAAGAATAAAGAGAAGAAATTCAAAGAACTTGTGAGAGTGAAGCCAAAGAAGAAAAAGA
AAAAGAAAAAGAAAACCAAGCCTGAATGTCCCTGCAGTGAGGACATCAGTGATACCTCCCAGGA
ACCTTCTCCACCCAAAACGTTTGCTGTCACCAGGTGCGGGTCCTCACACAAGCCTGCGGTCCAT
ATGAGCCCGCAGCTCCATGGTTCAGATACTGGAAACCACAAAGGGAAATTGAAAGCATGTGAGG
AGGATAATTTGAGCGAGTCCTCTTCCGAGAGCTTTCTTTGGAGTGATGAGGAATACGGTCAAGA
TGTTGATGTGACCACCAACCCAGATGAGGAGCTTGAAGGCGACGACCGCTATGACTTTGAGGTG
GTCCGATGCATCTGTGGAGTGCAGGAGGAAAATGACTTTATGATTCAGTGTGAAGAATGCCAGT
GCTGGCAGCACGGGGTCTGCATGGGATTACTGGAAGAAAATGTGCCCGAGAAATACACCTGCTA
CGTTTGCCAAGACCCTCCAGGTCAGAGGCCTGGCTTCAAGTACTGGTATGACAAGGAGTGGCTG
AGCCGGGGACATATGCATGGTCTGGCATTTCTAGAAGAGAACTACTCCCATCAGAATGCCAAGA
AGATTGTGGCCACCCATCAGCTTCTCGGGGATGTTCAGAGAGTGATTGAAGTTCTGCACGGCTT
GCAGCTCAAGATGAGCATCCTGCAAAGCAGGGAGCATCCTGATCTGCAGCTATGGTGCCAGCCC
TGGAAACAGCACTCAGGGGAAGGGAGAGCACATTCCAGACACATCCACATCACAGACGCCAGGA
GCGAGGAGTCCCCAAGCTATAGAACTTTGAATGGGGCGGTGGAGAAGCCATCGCCCCTGCCCCG
GTCTGTAGAGGAGTCTTACATCACCAGTGAGCATTGCTACCAGAAACCCCGCGCCTATTACCCC
GCTGTGGAGCAGAAGCTGGTAGTGGAGACAAGAGGCTCTGCCCTTGATGATGCAGTCAGCCCCC
TCTGTGAGAATGGTGACGACCCCCTCTCCCCTCGCCTAGGCTGGCCCATCGACCAAGATAGGAG
CAGAGGGGACATCGATCCCAAACCCAGCTCCCCAAAGGTGAGGGAATGCATTCCCAAGAAGGTC
TTGCTAGAAGAAACCCCTGCTCGGAAGCTGCTGGACAGAGGTGGAGAAGGGCTGGTGAGCTCTC
AGCACCAGTGGCAGTTTAACCTGCTGACACATGTGGAGTCTCTTCAGGATGAAGTAACACATCG
GATGGACTCCATTGAGAAGGAGCTGGACGTGCTGGAGAGCTGGCTGGACTACACTGGGGAACTG
GAGCCCCCAGAGCCACTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACTG
ACCTGGGCAAGGTGCAGCAGATTGCCCTCTGCTGCTCAACATGAAGCTGGGCACCCAAGACATT
GGAGCACAATCCTGGCATGTCTGCCAGGGGGCTTCGCATATTTAAGTAAATAAACTAAGCATGC
TGAATGCACGTGACACTGACTGACTTCAGGGATTTAGCCAGGAGTGTGATGGACATTGGGACAA
AGAGACCATTTTGGCTGCTGGAGGACGGGGCACTCTTGATCTGGAAGCCGACTGCAAAGGCAGC
CCATAGTCTTAGAATCCCCTTCTGTGCACATTGTTGAACGAAGCAAGTCTTTGCACATCTTCAA
TTGGAATCGTGCCACTGATGATAAACAAAATGAGAGCCAAAAAAAAAAAATCTAGTAGAAAACA
GTTGTAAATTCAATTTGCAGTTTATTTAATTGACTTTTGAGTCAGGTAGAGGCATGTGCCAACC
CCTCTGGTTTCTCTGCCTGGTGTGGCGTGTGTGCAGCAGGCAGCGACTGCTCTCATCCCTCAGC
CTCACTGGAACGTTGGGACTTCACTGTGCCATGCAGTTTTCCAAGGCTGGGGCCCGACTGCTCT
GCTTCCTCAAGACTTCATTTTCTCACCTCGACTCTTGCATGGTTTCACGGTACCAGGGACAAGT
TTTTATGTTTTTACTCCAGAGTCTGCTGGGCTGTGGTTTTGACAGCCAAGTGAAACTGCTGAAG
GAGGAGCTAGAATCTTGATGGAATGAGAATCTACAAGGAATTCCAGAAGGAAGCAGTCAGGGTC
TGGAACCCAAAGGACAGCATTTTCTACCCACTTATTAAATTCAATAGCTTCCCAGTTCTATTTA
AAGTTATGAAGAAAACGTTTCTCAAAATTTTTGAACTCTTTTACTGTAAAGATTTGTTACAAAG
AACTTGGGAGTTATTTTACGTCGTCATCATCAGCAAACTTGCAATTCTATATGTAGTCTCCCTC
CTCCCTGGAGGCTGGGGTAGCAGTTGCCGCTACACTGTAACACTTTAAGTCCCCGTCTGTATTA
CTTTGTGAGATGAAGGTAATTATGCTGCTTACAGTCCAGGTACAGTCTGTTTGTACCTTCAGAG
AGATTTGTGTTGTCGCAGGCTCTGGTTCCATGTGTCATTGCTGTGTCTTTTGGTTGGTTTTATC
ATACTAGGCAAAAGGTAAGAGGTTCCGTGCTGTGAGGACTTCATTTTTTGCATCACTAACGGTA
AACTTTGTTTGATTTATCCATCAACACCCACCGGTTCATTATCAGTTTTGGAATCTGTAATGTT
CTAGGCTGCAAATATTTACTATGTAACCATCAAGGAGCCGAGGTCAGTAGTTCCCAACAGCAGC
ACCTCTAGCTGCCTTGGGAGTGGTTTCGTTTCAGGCTCAACAGGCCATTGTGGCCATAAATTCA
GGCTTATGTACAGAGAAGTTTCAGGGAATGGATGCCTTGTCTAAAGATCTGTCTACCATTTGAT
ATAAAGTGAGCTGTGGGGCAAGCATATAGGGACTGTGTGACATGCAGTGACGCCAACACAGTCC
CTTACAAGAGGCTGCTTCCCACTTCTCACATTGATGTTTTCTTGTGGGAAGAAGTGCCCCAAGC
GTATACATGCCATCAGAGTCCTGGGTAGTTTAACATATAGCTACATTTTGAGACTTGTATGATG
GTTGTCTGAAAGGGGAAGGAACAAGATAATTATCTATAGCTACAACCGTGTGCGCTATGATGAT
TGGGGGCCATCGAAGTGGTTCAGTTGGTAGTGGTGCTTGCCGCCAAGCCTGCTGACCTGAGTTG
GATCCCCAGGACCCAATAGAGAGAATCGACACCTTCAAATTGTCCCATGACACACATACATACA
CACAAATGTAATAAAGGGTTTTAAATTAAGGTTTCTCTTTTATGTAACTACTCTTGATGTAGTG
TCACATCTGGGAAGCTGTGGCCTGGAAGGCGGTCATTTTGTGTCTTGTTCAGAGATGGAAGCAG
AAACTGACGATCCTAATTTTGCCATGTGGTTATTACTGGGTTTATCATTTAGGTTTTGTGAAGG
ACATCATCTGGTTTCATTGTGACTTTTGTTTTTAGGGAAGCAAAGCAAACTCCCCATATTCTGA
TAACCTCAATTCTTCCCTAACTTAAAGCCATGTTGAGGGGCTCCACTCCCAGTTTGGGTCAGAG
TGAATTCACCCCTATGTTGGAGCACTGGAATCTGTTATTTGCAAACAATGTTATCATTTAGAAA
GATGTGCACTACCTACGTTCTGTCTGTTAAAGAACTCTCCACCTATAGAAAGTCGCCTTTGATA
AAACAGTTCTGGTTCAGGGGCTGGGGATTTAGCTTAGTGGTAGAGTGCTTACCTAGGAAGCGCA
AGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAGAACAAAAAAAAAAAAAAAGTTCTGGTT
CGATCAGTCGTTCTTCGGTATATATGCAAGGTGGATCCTGGCTGAGCCAACATTGCACTGTGGA
TACGTATTTGTGTTTACGCGATGCTAGACAGAAGGCACTGTACATATGAGTGTTGCTCTCAAGC
AATATTTGCAAAACATGCAAACTTCTGTATCTGGAAAAATAAAACAGGTTCTTGTT

hide sequence

RefSeq Acc Id:

XM_008762342 ⟹ XP_008760564

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,170,360 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,710,270 - 144,816,696 (+)	NCBI
Rnor_6.0	3	152,273,298 - 152,379,742 (+)	NCBI

Sequence:

show sequence

TGGAGATGGTGCGTGTGTGTGGGGGGCGGGGGATACGCTGGGCGCGTCCCCGGGGTCACGTGGT
GCGCAGCGCGCACAGTCCTTCTGTCGGTTGGTCTGGAGCGGCGCAGCAGGAGCGGGGCCGTGAG
TTAAAAGAGAGAGGAACAAAGGACTTCCATTTTGTGTTGCGTCACATGCTTGCCCGATGCCCAC
AGAGCTCACAAGAGGGGGTTGGATTCCTTGGAACTGAAGTTGCAGTTCATCGTGAGTTGCTTGA
GAATAAAAGCAGCCCCGTTGATGACTGAAAATGACCAAGCACCCACCTAACAGACGAGGAATCA
GCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGGACCGTTTAAAAAACTGGTATCCGGCTCATAT
TGAAGACATTGACTACGAAGAAGGGAGAGTCCTCATCCATTTCAAGCGGTGGAACCATCGTTAC
GATGAGTGGTTTTGTTGGGACAGTCCTTATCTGCGTCCTTTAGAGAAGATACAGCTGAGGAAAG
AGGGTTTGCATGAAGAGGATGGATCTTCTGAATTTCAAATAAACCAGCAAGTGCTTGCTTGCTG
GTCTGACTGTCGATTTTATCCAGCCAGAGTCACTGCTGTGAACAAGGATGGTACTTACACTGTG
AAATTTTATGATGGAGTAGTTCAAACTGTCAAACATATTCATGTCAAAGCTTTTTCCAAAGATC
AGAATATTGTGGGTAATGCTAGGCCTAAAGAAACAGATCACAAAAGTCTTTCATCGTCTCCTGA
GAAACGAGAGAAGTTTAAAGAACAGAGAAAAGCCACGGTCAATGTGAAGAAAAACCAAGTGGAA
AAAGCCTTAAAGACAGAAAAGCGGCCCAAACCGCCCGACAAAGAGGGAAAGCTGACCTGCCCAG
AAAAGGGCAGAGTGTCAGAGAAAAGCCTTCCCAAGAACGAGAAGGAAGATAAGGAAAACATTTC
TGAGAACGAGCGGGAGTATTCTGGGGATGCCCAGGTGGACAAGAAGCCCGAGAAAGACCTTGTG
AAGAGTCCACAAGAGACCCTGAAGGAGCCAAAAAGAAAACGAGGCAGACCCCCTTCCATAACTC
CTACTGCTGTGGATTCAAATTCTCAAACTTTGCAACCAATAACATTGGAATTGAGAAGACGGAA
AATATCAAAACGAAGTGATACCCCATTAAAGCGCCCCCGACTTGACAAAAATTCATCCCAGGAA
CAGTCAAAAAAACGCTCTGAAAACAGTGACAAAGACTTATCCAGAAGACGGTCCTCCAGGCTGT
CCACTAATGGGACCCGTGAGACCCTAGATCCCGACCTGATTGTACCTGATCTGGTTCATACGGT
TGATACGAACCCTCTACAGGACAAGTCACCCAGTGCCAAGGAATCTGCTGAAGGTCAGTTGGAG
TCTCCATTGGAAGCTGGCCAGGTGTCTTCTGCATTAACTTGCCACCCCATCGGGGATGGCCTGG
GGGCTGCAGACTTGGAGTTGAACTGCAAGTCAATGGGAGAGAACACGATGAAAACAGAACCGGT
GTCTCCGCCTGCCGAGGTGCAGGAAGATTCCGCTGCTGAAGTTCCAAACACTTTGAAGAAAGCG
GGTGACTTTGTGAAGTTGCATGCGCCAGCTGTGGACCTGGACCACAAGTTTCGATGCAAGGTTG
TGGACTGTTTGAAGTTCTTCCGCAAGGCTAAACTGCTGCACTATCACATGAAGTACTTCCATGG
AATGGAGAAGTCACCAGAGCCAGAGGACGGGTCAGGGAGGACGCATGTACAGACTCGGGGCTCT
ACAGTGCCTGATAAGGCCAGCCAGGAGAGCCTGCCCCGGAAGCGGATCTCGGCCAGCTCCCCAA
CTGCCAAAGAGAAGGAAAAGAATAAAGAGAAGAAATTCAAAGAACTTGTGAGAGTGAAGCCAAA
GAAGAAAAAGAAAAAGAAAAAGAAAACCAAGCCTGAATGTCCCTGCAGTGAGGACATCAGTGAT
ACCTCCCAGGAACCTTCTCCACCCAAAACGTTTGCTGTCACCAGGTGCGGGTCCTCACACAAGC
CTGCGGTCCATATGAGCCCGCAGCTCCATGGTTCAGATACTGGAAACCACAAAGGGAAATTGAA
AGCATGTGAGGAGGATAATTTGAGCGAGTCCTCTTCCGAGAGCTTTCTTTGGAGTGATGAGGAA
TACGGTCAAGATGTTGATGTGACCACCAACCCAGATGAGGAGCTTGAAGGCGACGACCGCTATG
ACTTTGAGGTGGTCCGATGCATCTGTGGAGTGCAGGAGGAAAATGACTTTATGATTCAGTGTGA
AGAATGCCAGTGCTGGCAGCACGGGGTCTGCATGGGATTACTGGAAGAAAATGTGCCCGAGAAA
TACACCTGCTACGTTTGCCAAGACCCTCCAGGTCAGAGGCCTGGCTTCAAGTACTGGTATGACA
AGGAGTGGCTGAGCCGGGGACATATGCATGGTCTGGCATTTCTAGAAGAGAACTACTCCCATCA
GAATGCCAAGAAGATTGTGGCCACCCATCAGCTTCTCGGGGATGTTCAGAGAGTGATTGAAGTT
CTGCACGGCTTGCAGCTCAAGATGAGCATCCTGCAAAGCAGGGAGCATCCTGATCTGCAGCTAT
GGTGCCAGCCCTGGAAACAGCACTCAGGGGAAGGGAGAGCACATTCCAGACACATCCACATCAC
AGACGCCAGGAGCGAGGAGTCCCCAAGCTATAGAACTTTGAATGGGGCGGTGGAGAAGCCATCG
CCCCTGCCCCGGTCTGTAGAGGAGTCTTACATCACCAGTGAGCATTGCTACCAGAAACCCCGCG
CCTATTACCCCGCTGTGGAGCAGAAGCTGGTAGTGGAGACAAGAGGCTCTGCCCTTGATGATGC
AGTCAGCCCCCTCTGTGAGAATGGTGACGACCCCCTCTCCCCTCGCCTAGGCTGGCCCATCGAC
CAAGATAGGAGCAGAGGGGACATCGATCCCAAACCCAGCTCCCCAAAGGTGAGGGAATGCATTC
CCAAGAAGGTCTTGCTAGAAGAAACCCCTGCTCGGAAGCTGCTGGACAGAGGTGGAGAAGGGCT
GGTGAGCTCTCAGCACCAGTGGCAGTTTAACCTGCTGACACATGTGGAGTCTCTTCAGGATGAA
GTAACACATCGGATGGACTCCATTGAGAAGGAGCTGGACGTGCTGGAGAGCTGGCTGGACTACA
CTGGGGAACTGGAGCCCCCAGAGCCACTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCA
GCTGCTGACTGACCTGGGCAAGGTGCAGCAGATTGCCCTCTGCTGCTCAACATGAAGCTGGGCA
CCCAAGACATTGGAGCACAATCCTGGCATGTCTGCCAGGGGGCTTCGCATATTTAAGTAAATAA
ACTAAGCATGCTGAATGCACGTGACACTGACTGACTTCAGGGATTTAGCCAGGAGTGTGATGGA
CATTGGGACAAAGAGACCATTTTGGCTGCTGGAGGACGGGGCACTCTTGATCTGGAAGCCGACT
GCAAAGGCAGCCCATAGTCTTAGAATCCCCTTCTGTGCACATTGTTGAACGAAGCAAGTCTTTG
CACATCTTCAATTGGAATCGTGCCACTGATGATAAACAAAATGAGAGCCAAAAAAAAAAAATCT
AGTAGAAAACAGTTGTAAATTCAATTTGCAGTTTATTTAATTGACTTTTGAGTCAGGTAGAGGC
ATGTGCCAACCCCTCTGGTTTCTCTGCCTGGTGTGGCGTGTGTGCAGCAGGCAGCGACTGCTCT
CATCCCTCAGCCTCACTGGAACGTTGGGACTTCACTGTGCCATGCAGTTTTCCAAGGCTGGGGC
CCGACTGCTCTGCTTCCTCAAGACTTCATTTTCTCACCTCGACTCTTGCATGGTTTCACGGTAC
CAGGGACAAGTTTTTATGTTTTTACTCCAGAGTCTGCTGGGCTGTGGTTTTGACAGCCAAGTGA
AACTGCTGAAGGAGGAGCTAGAATCTTGATGGAATGAGAATCTACAAGGAATTCCAGAAGGAAG
CAGTCAGGGTCTGGAACCCAAAGGACAGCATTTTCTACCCACTTATTAAATTCAATAGCTTCCC
AGTTCTATTTAAAGTTATGAAGAAAACGTTTCTCAAAATTTTTGAACTCTTTTACTGTAAAGAT
TTGTTACAAAGAACTTGGGAGTTATTTTACGTCGTCATCATCAGCAAACTTGCAATTCTATATG
TAGTCTCCCTCCTCCCTGGAGGCTGGGGTAGCAGTTGCCGCTACACTGTAACACTTTAAGTCCC
CGTCTGTATTACTTTGTGAGATGAAGGTAATTATGCTGCTTACAGTCCAGGTACAGTCTGTTTG
TACCTTCAGAGAGATTTGTGTTGTCGCAGGCTCTGGTTCCATGTGTCATTGCTGTGTCTTTTGG
TTGGTTTTATCATACTAGGCAAAAGGTAAGAGGTTCCGTGCTGTGAGGACTTCATTTTTTGCAT
CACTAACGGTAAACTTTGTTTGATTTATCCATCAACACCCACCGGTTCATTATCAGTTTTGGAA
TCTGTAATGTTCTAGGCTGCAAATATTTACTATGTAACCATCAAGGAGCCGAGGTCAGTAGTTC
CCAACAGCAGCACCTCTAGCTGCCTTGGGAGTGGTTTCGTTTCAGGCTCAACAGGCCATTGTGG
CCATAAATTCAGGCTTATGTACAGAGAAGTTTCAGGGAATGGATGCCTTGTCTAAAGATCTGTC
TACCATTTGATATAAAGTGAGCTGTGGGGCAAGCATATAGGGACTGTGTGACATGCAGTGACGC
CAACACAGTCCCTTACAAGAGGCTGCTTCCCACTTCTCACATTGATGTTTTCTTGTGGGAAGAA
GTGCCCCAAGCGTATACATGCCATCAGAGTCCTGGGTAGTTTAACATATAGCTACATTTTGAGA
CTTGTATGATGGTTGTCTGAAAGGGGAAGGAACAAGATAATTATCTATAGCTACAACCGTGTGC
GCTATGATGATTGGGGGCCATCGAAGTGGTTCAGTTGGTAGTGGTGCTTGCCGCCAAGCCTGCT
GACCTGAGTTGGATCCCCAGGACCCAATAGAGAGAATCGACACCTTCAAATTGTCCCATGACAC
ACATACATACACACAAATGTAATAAAGGGTTTTAAATTAAGGTTTCTCTTTTATGTAACTACTC
TTGATGTAGTGTCACATCTGGGAAGCTGTGGCCTGGAAGGCGGTCATTTTGTGTCTTGTTCAGA
GATGGAAGCAGAAACTGACGATCCTAATTTTGCCATGTGGTTATTACTGGGTTTATCATTTAGG
TTTTGTGAAGGACATCATCTGGTTTCATTGTGACTTTTGTTTTTAGGGAAGCAAAGCAAACTCC
CCATATTCTGATAACCTCAATTCTTCCCTAACTTAAAGCCATGTTGAGGGGCTCCACTCCCAGT
TTGGGTCAGAGTGAATTCACCCCTATGTTGGAGCACTGGAATCTGTTATTTGCAAACAATGTTA
TCATTTAGAAAGATGTGCACTACCTACGTTCTGTCTGTTAAAGAACTCTCCACCTATAGAAAGT
CGCCTTTGATAAAACAGTTCTGGTTCAGGGGCTGGGGATTTAGCTTAGTGGTAGAGTGCTTACC
TAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAGAACAAAAAAAAAAAAA
AAGTTCTGGTTCGATCAGTCGTTCTTCGGTATATATGCAAGGTGGATCCTGGCTGAGCCAACAT
TGCACTGTGGATACGTATTTGTGTTTACGCGATGCTAGACAGAAGGCACTGTACATATGAGTGT
TGCTCTCAAGCAATATTTGCAAAACATGCAAACTTCTGTATCTGGAAAAATAAAACAGGTTCTT
GTT

hide sequence

RefSeq Acc Id:

XM_017591785 ⟹ XP_017447274

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,170,342 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,710,263 - 144,816,696 (+)	NCBI
Rnor_6.0	3	152,273,297 - 152,379,742 (+)	NCBI

Sequence:

show sequence

GTGGAGATGGTGCGTGTGTGTGGGGGGCGGGGGATACGCTGGGCGCGTCCCCGGGGTCACGTGG
TGCGCAGCGCGCACAGTCCTTCTGTCGGTTGGTCTGGAGCGGCGCAGCAGGAGCGGGGCCGTGA
GGAGAATAAAAGCAGCCCCGTTGATGACTGAAAATGACCAAGCACCCACCTAACAGACGAGGAA
TCAGCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGGACCGTTTAAAAAACTGGTATCCGGCTCA
TATTGAAGACATTGACTACGAAGAAGGGAGAGTCCTCATCCATTTCAAGCGGTGGAACCATCGT
TACGATGAGTGGTTTTGTTGGGACAGTCCTTATCTGCGTCCTTTAGAGAAGATACAGCTGAGGA
AAGAGGGTTTGCATGAAGAGGATGGATCTTCTGAATTTCAAATAAACCAGCAAGTGCTTGCTTG
CTGGTCTGACTGTCGATTTTATCCAGCCAGAGTCACTGCTGTGAACAAGGATGCTGTGGATTCA
AATTCTCAAACTTTGCAACCAATAACATTGGAATTGAGAAGACGGAAAATATCAAAACGAAGTG
ATACCCCATTAAAGCGCCCCCGACTTGACAAAAATTCATCCCAGGAACAGTCAAAAAAACGCTC
TGAAAACAGTGACAAAGACTTATCCAGAAGACGGTCCTCCAGGCTGTCCACTAATGGGACCCGT
GAGACCCTAGATCCCGACCTGATTGTACCTGATCTGGTTCATACGGTTGATACGAACCCTCTAC
AGGACAAGTCACCCAGTGCCAAGGAATCTGCTGAAGGTCAGTTGGAGTCTCCATTGGAAGCTGG
CCAGGTGTCTTCTGCATTAACTTGCCACCCCATCGGGGATGGCCTGGGGGCTGCAGACTTGGAG
TTGAACTGCAAGTCAATGGGAGAGAACACGATGAAAACAGAACCGGTGTCTCCGCCTGCCGAGG
TGCAGGAAGATTCCGCTGCTGAAGTTCCAAACACTTTGAAGAAAGCGGGTGACTTTGTGAAGTT
GCATGCGCCAGCTGTGGACCTGGACCACAAGTTTCGATGCAAGGTTGTGGACTGTTTGAAGTTC
TTCCGCAAGGCTAAACTGCTGCACTATCACATGAAGTACTTCCATGGAATGGAGAAGTCACCAG
AGCCAGAGGACGGGTCAGGGAGGACGCATGTACAGACTCGGGGCTCTACAGTGCCTGATAAGGC
CAGCCAGGAGAGCCTGCCCCGGAAGCGGATCTCGGCCAGCTCCCCAACTGCCAAAGAGAAGGAA
AAGAATAAAGAGAAGAAATTCAAAGAACTTGTGAGAGTGAAGCCAAAGAAGAAAAAGAAAAAGA
AAAAGAAAACCAAGCCTGAATGTCCCTGCAGTGAGGACATCAGTGATACCTCCCAGGAACCTTC
TCCACCCAAAACGTTTGCTGTCACCAGGTGCGGGTCCTCACACAAGCCTGCGGTCCATATGAGC
CCGCAGCTCCATGGTTCAGATACTGGAAACCACAAAGGGAAATTGAAAGCATGTGAGGAGGATA
ATTTGAGCGAGTCCTCTTCCGAGAGCTTTCTTTGGAGTGATGAGGAATACGGTCAAGATGTTGA
TGTGACCACCAACCCAGATGAGGAGCTTGAAGGCGACGACCGCTATGACTTTGAGGTGGTCCGA
TGCATCTGTGGAGTGCAGGAGGAAAATGACTTTATGATTCAGTGTGAAGAATGCCAGTGCTGGC
AGCACGGGGTCTGCATGGGATTACTGGAAGAAAATGTGCCCGAGAAATACACCTGCTACGTTTG
CCAAGACCCTCCAGGTCAGAGGCCTGGCTTCAAGTACTGGTATGACAAGGAGTGGCTGAGCCGG
GGACATATGCATGGTCTGGCATTTCTAGAAGAGAACTACTCCCATCAGAATGCCAAGAAGATTG
TGGCCACCCATCAGCTTCTCGGGGATGTTCAGAGAGTGATTGAAGTTCTGCACGGCTTGCAGCT
CAAGATGAGCATCCTGCAAAGCAGGGAGCATCCTGATCTGCAGCTATGGTGCCAGCCCTGGAAA
CAGCACTCAGGGGAAGGGAGAGCACATTCCAGACACATCCACATCACAGACGCCAGGAGCGAGG
AGTCCCCAAGCTATAGAACTTTGAATGGGGCGGTGGAGAAGCCATCGCCCCTGCCCCGGTCTGT
AGAGGAGTCTTACATCACCAGTGAGCATTGCTACCAGAAACCCCGCGCCTATTACCCCGCTGTG
GAGCAGAAGCTGGTAGTGGAGACAAGAGGCTCTGCCCTTGATGATGCAGTCAGCCCCCTCTGTG
AGAATGGTGACGACCCCCTCTCCCCTCGCCTAGGCTGGCCCATCGACCAAGATAGGAGCAGAGG
GGACATCGATCCCAAACCCAGCTCCCCAAAGGTGAGGGAATGCATTCCCAAGAAGGTCTTGCTA
GAAGAAACCCCTGCTCGGAAGCTGCTGGACAGAGGTGGAGAAGGGCTGGTGAGCTCTCAGCACC
AGTGGCAGTTTAACCTGCTGACACATGTGGAGTCTCTTCAGGATGAAGTAACACATCGGATGGA
CTCCATTGAGAAGGAGCTGGACGTGCTGGAGAGCTGGCTGGACTACACTGGGGAACTGGAGCCC
CCAGAGCCACTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACTGACCTGG
GCAAGGTGCAGCAGATTGCCCTCTGCTGCTCAACATGAAGCTGGGCACCCAAGACATTGGAGCA
CAATCCTGGCATGTCTGCCAGGGGGCTTCGCATATTTAAGTAAATAAACTAAGCATGCTGAATG
CACGTGACACTGACTGACTTCAGGGATTTAGCCAGGAGTGTGATGGACATTGGGACAAAGAGAC
CATTTTGGCTGCTGGAGGACGGGGCACTCTTGATCTGGAAGCCGACTGCAAAGGCAGCCCATAG
TCTTAGAATCCCCTTCTGTGCACATTGTTGAACGAAGCAAGTCTTTGCACATCTTCAATTGGAA
TCGTGCCACTGATGATAAACAAAATGAGAGCCAAAAAAAAAAAATCTAGTAGAAAACAGTTGTA
AATTCAATTTGCAGTTTATTTAATTGACTTTTGAGTCAGGTAGAGGCATGTGCCAACCCCTCTG
GTTTCTCTGCCTGGTGTGGCGTGTGTGCAGCAGGCAGCGACTGCTCTCATCCCTCAGCCTCACT
GGAACGTTGGGACTTCACTGTGCCATGCAGTTTTCCAAGGCTGGGGCCCGACTGCTCTGCTTCC
TCAAGACTTCATTTTCTCACCTCGACTCTTGCATGGTTTCACGGTACCAGGGACAAGTTTTTAT
GTTTTTACTCCAGAGTCTGCTGGGCTGTGGTTTTGACAGCCAAGTGAAACTGCTGAAGGAGGAG
CTAGAATCTTGATGGAATGAGAATCTACAAGGAATTCCAGAAGGAAGCAGTCAGGGTCTGGAAC
CCAAAGGACAGCATTTTCTACCCACTTATTAAATTCAATAGCTTCCCAGTTCTATTTAAAGTTA
TGAAGAAAACGTTTCTCAAAATTTTTGAACTCTTTTACTGTAAAGATTTGTTACAAAGAACTTG
GGAGTTATTTTACGTCGTCATCATCAGCAAACTTGCAATTCTATATGTAGTCTCCCTCCTCCCT
GGAGGCTGGGGTAGCAGTTGCCGCTACACTGTAACACTTTAAGTCCCCGTCTGTATTACTTTGT
GAGATGAAGGTAATTATGCTGCTTACAGTCCAGGTACAGTCTGTTTGTACCTTCAGAGAGATTT
GTGTTGTCGCAGGCTCTGGTTCCATGTGTCATTGCTGTGTCTTTTGGTTGGTTTTATCATACTA
GGCAAAAGGTAAGAGGTTCCGTGCTGTGAGGACTTCATTTTTTGCATCACTAACGGTAAACTTT
GTTTGATTTATCCATCAACACCCACCGGTTCATTATCAGTTTTGGAATCTGTAATGTTCTAGGC
TGCAAATATTTACTATGTAACCATCAAGGAGCCGAGGTCAGTAGTTCCCAACAGCAGCACCTCT
AGCTGCCTTGGGAGTGGTTTCGTTTCAGGCTCAACAGGCCATTGTGGCCATAAATTCAGGCTTA
TGTACAGAGAAGTTTCAGGGAATGGATGCCTTGTCTAAAGATCTGTCTACCATTTGATATAAAG
TGAGCTGTGGGGCAAGCATATAGGGACTGTGTGACATGCAGTGACGCCAACACAGTCCCTTACA
AGAGGCTGCTTCCCACTTCTCACATTGATGTTTTCTTGTGGGAAGAAGTGCCCCAAGCGTATAC
ATGCCATCAGAGTCCTGGGTAGTTTAACATATAGCTACATTTTGAGACTTGTATGATGGTTGTC
TGAAAGGGGAAGGAACAAGATAATTATCTATAGCTACAACCGTGTGCGCTATGATGATTGGGGG
CCATCGAAGTGGTTCAGTTGGTAGTGGTGCTTGCCGCCAAGCCTGCTGACCTGAGTTGGATCCC
CAGGACCCAATAGAGAGAATCGACACCTTCAAATTGTCCCATGACACACATACATACACACAAA
TGTAATAAAGGGTTTTAAATTAAGGTTTCTCTTTTATGTAACTACTCTTGATGTAGTGTCACAT
CTGGGAAGCTGTGGCCTGGAAGGCGGTCATTTTGTGTCTTGTTCAGAGATGGAAGCAGAAACTG
ACGATCCTAATTTTGCCATGTGGTTATTACTGGGTTTATCATTTAGGTTTTGTGAAGGACATCA
TCTGGTTTCATTGTGACTTTTGTTTTTAGGGAAGCAAAGCAAACTCCCCATATTCTGATAACCT
CAATTCTTCCCTAACTTAAAGCCATGTTGAGGGGCTCCACTCCCAGTTTGGGTCAGAGTGAATT
CACCCCTATGTTGGAGCACTGGAATCTGTTATTTGCAAACAATGTTATCATTTAGAAAGATGTG
CACTACCTACGTTCTGTCTGTTAAAGAACTCTCCACCTATAGAAAGTCGCCTTTGATAAAACAG
TTCTGGTTCAGGGGCTGGGGATTTAGCTTAGTGGTAGAGTGCTTACCTAGGAAGCGCAAGGCCC
TGGGTTCGGTCCCCAGCTCCGAAAAAAAAAGAACAAAAAAAAAAAAAAAGTTCTGGTTCGATCA
GTCGTTCTTCGGTATATATGCAAGGTGGATCCTGGCTGAGCCAACATTGCACTGTGGATACGTA
TTTGTGTTTACGCGATGCTAGACAGAAGGCACTGTACATATGAGTGTTGCTCTCAAGCAATATT
TGCAAAACATGCAAACTTCTGTATCTGGAAAAATAAAACAGGTTCTTGTT

hide sequence

RefSeq Acc Id:

XM_039105081 ⟹ XP_038961009

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,189,890 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,729,977 - 144,816,696 (+)	NCBI

RefSeq Acc Id:

XM_039105082 ⟹ XP_038961010

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,170,457 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,710,425 - 144,816,696 (+)	NCBI

RefSeq Acc Id:

XM_039105083 ⟹ XP_038961011

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,221,946 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,761,871 - 144,816,696 (+)	NCBI

RefSeq Acc Id:

XM_039105084 ⟹ XP_038961012

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,219,461 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,759,388 - 144,816,696 (+)	NCBI

RefSeq Acc Id:

XM_039105086 ⟹ XP_038961014

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,232,665 - 165,279,276 (+)	NCBI
mRatBN7.2	3	144,772,567 - 144,816,696 (+)	NCBI

RefSeq Acc Id:

XM_063283850 ⟹ XP_063139920

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	165,219,490 - 165,279,276 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101265	(Get FASTA)	NCBI Sequence Viewer
	XP_006235466	(Get FASTA)	NCBI Sequence Viewer
	XP_008760564	(Get FASTA)	NCBI Sequence Viewer
	XP_017447274	(Get FASTA)	NCBI Sequence Viewer
	XP_038961009	(Get FASTA)	NCBI Sequence Viewer
	XP_038961010	(Get FASTA)	NCBI Sequence Viewer
	XP_038961011	(Get FASTA)	NCBI Sequence Viewer
	XP_038961012	(Get FASTA)	NCBI Sequence Viewer
	XP_038961014	(Get FASTA)	NCBI Sequence Viewer
	XP_063139920	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL85852	(Get FASTA)	NCBI Sequence Viewer
	EDL85853	(Get FASTA)	NCBI Sequence Viewer
	EDL85854	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000027067
	ENSRNOP00000027067.4

RefSeq Acc Id:

NP_001101265 ⟸ NM_001107795

- UniProtKB:

D3ZQB7 (UniProtKB/TrEMBL), A6KIA1 (UniProtKB/TrEMBL), A0A8I6AMU6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVLIHFKRWNHRYDEWFCWDSPY
LRPLEKIQLRKEGLHEEDGSSEFQINQQVLACWSDCRFYPARVTAVNKDGTYTVKFYDGVVQTV
KHIHVKAFSKDQNIVGNARPKETDHKSLSSSPEKREKFKEQRKATVNVKKNQVEKALKTEKRPK
PPDKEGKLTCPEKGRVSEKSLPKNEKEDKENISENEREYSGDAQVDKKPEKDLVKSPQETLKEP
KRKRGRPPSITPTAVDSNSQTLQPITLELRRRKISKRSDTPLKRPRLDKNSSQEQSKKRSENSD
KDLSRRRSSRLSTNGTRETLDPDLIVPDLVHTVDTNPLQDKSPSAKESAEGQLESPLEAGQVSS
ALTCHPIGDGLGAADLELNCKSMGENTMKTEPVSPPAEVQEDSAAEVPNTLKKAGDFVKLHAPA
VDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEDGSGRTHVQTRGSTVPDKASQES
LPRKRISASSPTAKEKEKNKEKKFKELVRVKPKKKKKKKKKTKPECPCSEDISDTSQEPSPPKT
FAVTRCGSSHKPAVHMSPQLHGSDTGNHKGKLKACEEDNLSESSSESFLWSDEEYGQDVDVTTN
PDEELEGDDRYDFEVVRCICGVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPP
GQRPGFKYWYDKEWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSI
LQSREHPDLQLWCQPWKQHSGEGRAHSRHIHITDARSEESPSYRTLNGAVEKPSPLPRSVEESY
ITSEHCYQKPRAYYPAVEQKLVVETRGSALDDAVSPLCENGDDPLSPRLGWPIDQDRSRGDIDP
KPSSPKVRECIPKKVLLEETPARKLLDRGGEGLVSSQHQWQFNLLTHVESLQDEVTHRMDSIEK
ELDVLESWLDYTGELEPPEPLARLPQLKHCIKQLLTDLGKVQQIALCCST

hide sequence

RefSeq Acc Id:	XP_006235466 ⟸ XM_006235404
- Peptide Label:	isoform X1
- UniProtKB:	D3ZQB7 (UniProtKB/TrEMBL), A6KIA1 (UniProtKB/TrEMBL), A0A8I6AMU6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVLIHFKRWNHRYDEWFCWDSPY LRPLEKIQLRKEGLHEEDGSSEFQINQQVLACWSDCRFYPARVTAVNKDGTYTVKFYDGVVQTV KHIHVKAFSKDQNIVGNARPKETDHKSLSSSPEKREKFKEQRKATVNVKKNQVEKALKTEKRPK PPDKEGKLTCPEKGRVSEKSLPKNEKEDKENISENEREYSGDAQVDKKPEKDLVKSPQETLKEP KRKRGRPPSITPTAVDSNSQTLQPITLELRRRKISKRSDTPLKRPRLDKNSSQEQSKKRSENSD KDLSRRRSSRLSTNGTRETLDPDLIVPDLVHTVDTNPLQDKSPSAKESAEGQLESPLEAGQVSS ALTCHPIGDGLGAADLELNCKSMGENTMKTEPVSPPAEVQEDSAAEVPNTLKKAGDFVKLHAPA VDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEDGSGRTHVQTRGSTVPDKASQES LPRKRISASSPTAKEKEKNKEKKFKELVRVKPKKKKKKKKKTKPECPCSEDISDTSQEPSPPKT FAVTRCGSSHKPAVHMSPQLHGSDTGNHKGKLKACEEDNLSESSSESFLWSDEEYGQDVDVTTN PDEELEGDDRYDFEVVRCICGVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPP GQRPGFKYWYDKEWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSI LQSREHPDLQLWCQPWKQHSGEGRAHSRHIHITDARSEESPSYRTLNGAVEKPSPLPRSVEESY ITSEHCYQKPRAYYPAVEQKLVVETRGSALDDAVSPLCENGDDPLSPRLGWPIDQDRSRGDIDP KPSSPKVRECIPKKVLLEETPARKLLDRGGEGLVSSQHQWQFNLLTHVESLQDEVTHRMDSIEK ELDVLESWLDYTGELEPPEPLARLPQLKHCIKQLLTDLGKVQQIALCCST hide sequence

RefSeq Acc Id:	XP_008760564 ⟸ XM_008762342
- Peptide Label:	isoform X1
- UniProtKB:	D3ZQB7 (UniProtKB/TrEMBL), A6KIA1 (UniProtKB/TrEMBL), A0A8I6AMU6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVLIHFKRWNHRYDEWFCWDSPY LRPLEKIQLRKEGLHEEDGSSEFQINQQVLACWSDCRFYPARVTAVNKDGTYTVKFYDGVVQTV KHIHVKAFSKDQNIVGNARPKETDHKSLSSSPEKREKFKEQRKATVNVKKNQVEKALKTEKRPK PPDKEGKLTCPEKGRVSEKSLPKNEKEDKENISENEREYSGDAQVDKKPEKDLVKSPQETLKEP KRKRGRPPSITPTAVDSNSQTLQPITLELRRRKISKRSDTPLKRPRLDKNSSQEQSKKRSENSD KDLSRRRSSRLSTNGTRETLDPDLIVPDLVHTVDTNPLQDKSPSAKESAEGQLESPLEAGQVSS ALTCHPIGDGLGAADLELNCKSMGENTMKTEPVSPPAEVQEDSAAEVPNTLKKAGDFVKLHAPA VDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEDGSGRTHVQTRGSTVPDKASQES LPRKRISASSPTAKEKEKNKEKKFKELVRVKPKKKKKKKKKTKPECPCSEDISDTSQEPSPPKT FAVTRCGSSHKPAVHMSPQLHGSDTGNHKGKLKACEEDNLSESSSESFLWSDEEYGQDVDVTTN PDEELEGDDRYDFEVVRCICGVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPP GQRPGFKYWYDKEWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSI LQSREHPDLQLWCQPWKQHSGEGRAHSRHIHITDARSEESPSYRTLNGAVEKPSPLPRSVEESY ITSEHCYQKPRAYYPAVEQKLVVETRGSALDDAVSPLCENGDDPLSPRLGWPIDQDRSRGDIDP KPSSPKVRECIPKKVLLEETPARKLLDRGGEGLVSSQHQWQFNLLTHVESLQDEVTHRMDSIEK ELDVLESWLDYTGELEPPEPLARLPQLKHCIKQLLTDLGKVQQIALCCST hide sequence

RefSeq Acc Id:

XP_017447274 ⟸ XM_017591785

- Peptide Label:

isoform X3

- Sequence:

show sequence

MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGRVLIHFKRWNHRYDEWFCWDSPY
LRPLEKIQLRKEGLHEEDGSSEFQINQQVLACWSDCRFYPARVTAVNKDAVDSNSQTLQPITLE
LRRRKISKRSDTPLKRPRLDKNSSQEQSKKRSENSDKDLSRRRSSRLSTNGTRETLDPDLIVPD
LVHTVDTNPLQDKSPSAKESAEGQLESPLEAGQVSSALTCHPIGDGLGAADLELNCKSMGENTM
KTEPVSPPAEVQEDSAAEVPNTLKKAGDFVKLHAPAVDLDHKFRCKVVDCLKFFRKAKLLHYHM
KYFHGMEKSPEPEDGSGRTHVQTRGSTVPDKASQESLPRKRISASSPTAKEKEKNKEKKFKELV
RVKPKKKKKKKKKTKPECPCSEDISDTSQEPSPPKTFAVTRCGSSHKPAVHMSPQLHGSDTGNH
KGKLKACEEDNLSESSSESFLWSDEEYGQDVDVTTNPDEELEGDDRYDFEVVRCICGVQEENDF
MIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPGFKYWYDKEWLSRGHMHGLAFLEE
NYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPDLQLWCQPWKQHSGEGRAHSR
HIHITDARSEESPSYRTLNGAVEKPSPLPRSVEESYITSEHCYQKPRAYYPAVEQKLVVETRGS
ALDDAVSPLCENGDDPLSPRLGWPIDQDRSRGDIDPKPSSPKVRECIPKKVLLEETPARKLLDR
GGEGLVSSQHQWQFNLLTHVESLQDEVTHRMDSIEKELDVLESWLDYTGELEPPEPLARLPQLK
HCIKQLLTDLGKVQQIALCCST

hide sequence

Ensembl Acc Id:

ENSRNOP00000027067 ⟸ ENSRNOT00000027067

RefSeq Acc Id:	XP_038961010 ⟸ XM_039105082
- Peptide Label:	isoform X1
- UniProtKB:	D3ZQB7 (UniProtKB/TrEMBL), A6KIA1 (UniProtKB/TrEMBL), A0A8I6AMU6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961009 ⟸ XM_039105081
- Peptide Label:	isoform X1
- UniProtKB:	D3ZQB7 (UniProtKB/TrEMBL), A6KIA1 (UniProtKB/TrEMBL), A0A8I6AMU6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961012 ⟸ XM_039105084
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AMU6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961011 ⟸ XM_039105083
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AMU6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961014 ⟸ XM_039105086
- Peptide Label:	isoform X4

Ensembl Acc Id:

ENSRNOP00000090317 ⟸ ENSRNOT00000095858

RefSeq Acc Id:	XP_063139920 ⟸ XM_063283850
- Peptide Label:	isoform X4

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZQB7-F1-model_v2	AlphaFold	D3ZQB7	1-1010	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305020	AgrOrtholog
BioCyc Gene	G2FUF-47101	BioCyc
Ensembl Genes	ENSRNOG00000019948	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000027067	ENTREZGENE
	ENSRNOT00000027067.8	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.140	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
InterPro	Crb2_Tudor	UniProtKB/TrEMBL
	DUF3776	UniProtKB/TrEMBL
	Mbt	UniProtKB/TrEMBL
	PHF20-like	UniProtKB/TrEMBL
	Tudor	UniProtKB/TrEMBL
	Zinc_finger_PHD-type_CS	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
	Znf_FYVE_PHD	UniProtKB/TrEMBL
	Znf_PHD	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:311575	UniProtKB/TrEMBL
NCBI Gene	311575	ENTREZGENE
PANTHER	PTHR15856	UniProtKB/TrEMBL
	PTHR15856:SF27	UniProtKB/TrEMBL
Pfam	DUF3776	UniProtKB/TrEMBL
	MBT	UniProtKB/TrEMBL
	PHD_5	UniProtKB/TrEMBL
	Tudor_3	UniProtKB/TrEMBL
PhenoGen	Phf20	PhenoGen
PROSITE	ZF_PHD_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000019948	RatGTEx
SMART	PHD	UniProtKB/TrEMBL
	TUDOR	UniProtKB/TrEMBL
Superfamily-SCOP	FYVE_PHD_ZnF	UniProtKB/TrEMBL
	Tudor/PWWP/MBT	UniProtKB/TrEMBL
UniProt	A0A8I6AMU6	ENTREZGENE
	A6KIA1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZQB7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-04-23	Phf20	PHD finger protein 20	RGD1305020	similar to Hepatocellular carcinoma-associated antigen 58 homolog	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1305020	similar to Hepatocellular carcinoma-associated antigen 58 homolog	RGD1305020_predicted	similar to Hepatocellular carcinoma-associated antigen 58 homolog (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1305020_predicted	similar to Hepatocellular carcinoma-associated antigen 58 homolog (predicted)	LOC311575_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311575_predicted	similar to Hepatocellular carcinoma-associated antigen 58 homolog (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar