Ggact (gamma-glutamylamine cyclotransferase) - Rat Genome Database

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Gene: Ggact (gamma-glutamylamine cyclotransferase) Rattus norvegicus
Analyze
Symbol: Ggact
Name: gamma-glutamylamine cyclotransferase
RGD ID: 1304748
Description: Predicted to enable gamma-glutamylaminecyclotransferase activity. Predicted to be involved in modified amino acid catabolic process. Predicted to be active in cytosol. Orthologous to human GGACT (gamma-glutamylamine cyclotransferase); INTERACTS WITH 1,2-dimethylhydrazine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: A2ld1; AIG2-like domain 1; AIG2-like domain-containing protein 1; gamma-glutamylaminecyclotransferase; LOC290500; MGC112665; RGD1304748; similar to cDNA sequence BC006662
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr815106,375,924 - 106,406,649 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl15106,366,120 - 106,404,004 (-)EnsemblGRCr8
mRatBN7.21599,969,246 - 99,998,343 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1599,968,282 - 99,993,455 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx15103,902,683 - 103,926,264 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.015105,001,305 - 105,024,861 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.015101,928,558 - 101,952,113 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.015109,307,683 - 109,336,779 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15109,307,904 - 109,316,953 (-)Ensemblrn6Rnor6.0
Rnor_5.015112,688,790 - 112,716,622 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.415108,029,945 - 108,053,498 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1598,739,747 - 98,763,312 (-)NCBICelera
RGSC_v3.115108,045,724 - 108,069,278 (-)NCBI
Cytogenetic Map15q25NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:20110353   PMID:23376485   PMID:23533145  


Genomics

Comparative Map Data
Ggact
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr815106,375,924 - 106,406,649 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl15106,366,120 - 106,404,004 (-)EnsemblGRCr8
mRatBN7.21599,969,246 - 99,998,343 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1599,968,282 - 99,993,455 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx15103,902,683 - 103,926,264 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.015105,001,305 - 105,024,861 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.015101,928,558 - 101,952,113 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.015109,307,683 - 109,336,779 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15109,307,904 - 109,316,953 (-)Ensemblrn6Rnor6.0
Rnor_5.015112,688,790 - 112,716,622 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.415108,029,945 - 108,053,498 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1598,739,747 - 98,763,312 (-)NCBICelera
RGSC_v3.115108,045,724 - 108,069,278 (-)NCBI
Cytogenetic Map15q25NCBI
GGACT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813100,530,180 - 100,588,789 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13100,528,034 - 100,589,528 (-)Ensemblhg38GRCh38
GRCh3713101,182,434 - 101,241,043 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361399,980,002 - 99,987,974 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1382,026,987 - 82,085,620 (-)NCBICelera
Cytogenetic Map13q32.3NCBI
HuRef1381,778,487 - 81,837,097 (-)NCBIHuRef
CHM1_113101,152,717 - 101,211,314 (-)NCBICHM1_1
T2T-CHM13v2.01399,745,466 - 99,804,072 (-)NCBIT2T-CHM13v2.0
Ggact
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914123,128,272 - 123,151,173 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14123,053,635 - 123,151,169 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm3814122,890,860 - 122,913,413 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14122,816,223 - 122,913,757 (-)Ensemblmm10GRCm38
MGSCv3714123,290,082 - 123,312,387 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv3614122,026,054 - 122,048,315 (-)NCBIMGSCv36mm8
Celera14121,449,204 - 121,471,425 (-)NCBICelera
Cytogenetic Map14E5NCBI
cM Map1466.04NCBI
Ggact
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540410,280,013 - 10,316,531 (+)NCBIChiLan1.0ChiLan1.0
GGACT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214102,039,592 - 102,113,988 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113100,689,407 - 100,781,473 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01381,678,715 - 81,757,024 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113100,837,605 - 100,895,588 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13100,839,483 - 100,839,944 (-)EnsemblpanPan2panpan1.1
GGACT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12250,429,066 - 50,471,624 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2250,429,190 - 50,470,657 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2250,209,180 - 50,251,705 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02250,871,064 - 50,913,818 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2250,871,200 - 50,914,106 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12250,517,921 - 50,560,440 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02250,554,164 - 50,596,796 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02250,591,542 - 50,634,058 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ggact
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945185,782,552 - 185,824,920 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647210,127,470 - 10,166,552 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647210,127,305 - 10,167,543 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GGACT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11169,287,685 - 69,349,540 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21176,548,815 - 76,611,833 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GGACT
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1379,139,506 - 79,213,496 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl379,157,780 - 79,158,241 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604635,643,631 - 35,720,457 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ggact
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479310,677,662 - 10,690,034 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462479310,655,447 - 10,691,334 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Ggact
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1122,004,355 - 2,005,323 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:112
Count of miRNA genes:90
Interacting mature miRNAs:102
Transcripts:ENSRNOT00000019158
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1582194914108192169Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1574735564106469153Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)1561710951106710951Rat
1358354Srcrt5Stress Responsive Cort QTL 53.38blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1582503470108192169Rat
1641889Colcr6Colorectal carcinoma resistance QTL 62.90.0126intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)1583700787108192169Rat
70155Gcs1Gastric cancer susceptibility QTL13.8stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)1582714037106778197Rat
2313080Bss65Bone structure and strength QTL 653.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1567399137108192169Rat
2317055Aia10Adjuvant induced arthritis QTL 103.41joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1582194914108192169Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1564571127108192169Rat
7411646Foco21Food consumption QTL 2123.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)1584278281108192169Rat

Markers in Region
RH141187  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21599,969,819 - 99,970,031 (+)MAPPERmRatBN7.2
Rnor_6.015109,308,430 - 109,308,641NCBIRnor6.0
Rnor_5.015112,689,340 - 112,689,551UniSTSRnor5.0
RGSC_v3.415108,030,480 - 108,030,691UniSTSRGSC3.4
Celera1598,740,282 - 98,740,493UniSTS
RH 3.4 Map15716.8UniSTS
Cytogenetic Map15q25UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001025634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001310058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006252522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008770972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017599640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039093205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063274178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC098699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000019158   ⟹   ENSRNOP00000000118
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl15106,375,924 - 106,404,004 (-)Ensembl
mRatBN7.2 Ensembl1599,969,285 - 99,993,455 (-)Ensembl
Rnor_6.0 Ensembl15109,307,904 - 109,316,953 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000119176   ⟹   ENSRNOP00000092826
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl15106,371,111 - 106,399,814 (-)Ensembl
mRatBN7.2 Ensembl1599,968,282 - 99,993,455 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000136704   ⟹   ENSRNOP00000102594
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl15106,376,209 - 106,399,522 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000160057   ⟹   ENSRNOP00000108380
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl15106,366,120 - 106,398,705 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000162853   ⟹   ENSRNOP00000106064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl15106,375,912 - 106,399,515 (-)Ensembl
RefSeq Acc Id: NM_001025634   ⟹   NP_001020805
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,477 (-)NCBI
mRatBN7.21599,969,285 - 99,992,839 (-)NCBI
Rnor_6.015109,307,895 - 109,331,447 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
RGSC_v3.415108,029,945 - 108,053,498 (-)RGD
Celera1598,739,747 - 98,763,312 (-)RGD
Sequence:
RefSeq Acc Id: NM_001310058   ⟹   NP_001296987
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,477 (-)NCBI
mRatBN7.21599,969,285 - 99,992,839 (-)NCBI
Rnor_6.015109,307,895 - 109,331,447 (-)NCBI
Celera1598,739,747 - 98,763,312 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006252512   ⟹   XP_006252574
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,999 (-)NCBI
mRatBN7.21599,969,246 - 99,992,923 (-)NCBI
Rnor_6.015109,307,683 - 109,332,796 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006252513   ⟹   XP_006252575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,371 (-)NCBI
mRatBN7.21599,969,246 - 99,992,664 (-)NCBI
Rnor_6.015109,307,683 - 109,331,391 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006252520   ⟹   XP_006252582
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,406,649 (-)NCBI
mRatBN7.21599,969,246 - 99,998,343 (-)NCBI
Rnor_6.015109,307,683 - 109,336,779 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006252521   ⟹   XP_006252583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,372 (-)NCBI
mRatBN7.21599,969,246 - 99,992,674 (-)NCBI
Rnor_6.015109,307,683 - 109,331,391 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006252522   ⟹   XP_006252584
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,372 (-)NCBI
mRatBN7.21599,969,246 - 99,992,503 (-)NCBI
Rnor_6.015109,307,683 - 109,331,125 (-)NCBI
Rnor_5.015112,688,790 - 112,716,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039093202   ⟹   XP_038949130
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,510 (-)NCBI
mRatBN7.21599,969,246 - 99,992,872 (-)NCBI
RefSeq Acc Id: XM_039093203   ⟹   XP_038949131
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,371 (-)NCBI
mRatBN7.21599,969,246 - 99,992,541 (-)NCBI
RefSeq Acc Id: XM_039093205   ⟹   XP_038949133
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,371 (-)NCBI
mRatBN7.21599,969,246 - 99,992,502 (-)NCBI
RefSeq Acc Id: XM_063274176   ⟹   XP_063130246
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,406,649 (-)NCBI
RefSeq Acc Id: XM_063274177   ⟹   XP_063130247
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,399,371 (-)NCBI
RefSeq Acc Id: XM_063274178   ⟹   XP_063130248
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr815106,375,924 - 106,406,649 (-)NCBI
RefSeq Acc Id: NP_001020805   ⟸   NM_001025634
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252582   ⟸   XM_006252520
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252574   ⟸   XM_006252512
- Peptide Label: isoform X1
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A0A8L2PXS0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252575   ⟸   XM_006252513
- Peptide Label: isoform X1
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A0A8L2PXS0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252583   ⟸   XM_006252521
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252584   ⟸   XM_006252522
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001296987   ⟸   NM_001310058
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000000118   ⟸   ENSRNOT00000019158
RefSeq Acc Id: XP_038949130   ⟸   XM_039093202
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949131   ⟸   XM_039093203
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949133   ⟸   XM_039093205
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000092826   ⟸   ENSRNOT00000119176
RefSeq Acc Id: XP_063130248   ⟸   XM_063274178
- Peptide Label: isoform X2
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A6HUM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130246   ⟸   XM_063274176
- Peptide Label: isoform X1
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A0A8L2PXS0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130247   ⟸   XM_063274177
- Peptide Label: isoform X1
- UniProtKB: Q4KM86 (UniProtKB/Swiss-Prot),   A0A8L2PXS0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000108380   ⟸   ENSRNOT00000160057
Ensembl Acc Id: ENSRNOP00000106064   ⟸   ENSRNOT00000162853
Ensembl Acc Id: ENSRNOP00000102594   ⟸   ENSRNOT00000136704
Protein Domains
Gamma-glutamylcyclotransferase AIG2-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4KM86-F1-model_v2 AlphaFold Q4KM86 1-149 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304748 AgrOrtholog
BioCyc Gene G2FUF-12335 BioCyc
Ensembl Genes ENSRNOG00000027040 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000019158 ENTREZGENE
  ENSRNOT00000119176.1 UniProtKB/Swiss-Prot
Gene3D-CATH Gamma-glutamyl cyclotransferase-like UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7386922 IMAGE-MGC_LOAD
InterPro AIG2-like UniProtKB/Swiss-Prot
  GGACT UniProtKB/Swiss-Prot
  GGCT-like UniProtKB/Swiss-Prot
  GGCT-like_sf UniProtKB/Swiss-Prot
MGC_CLONE MGC:112665 IMAGE-MGC_LOAD
NCBI Gene 290500 ENTREZGENE
PANTHER GAMMA-GLUTAMYLAMINECYCLOTRANSFERASE UniProtKB/Swiss-Prot
  PTHR12510 UniProtKB/Swiss-Prot
Pfam GGACT UniProtKB/Swiss-Prot
PhenoGen Ggact PhenoGen
RatGTEx ENSRNOG00000027040 RatGTEx
Superfamily-SCOP SSF110857 UniProtKB/Swiss-Prot
UniProt A0A8L2PXS0 ENTREZGENE, UniProtKB/TrEMBL
  A6HUM7 ENTREZGENE, UniProtKB/TrEMBL
  GGACT_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-09-09 A2ld1  AIG2-like domain 1  RGD1304748  similar to cDNA sequence BC006662  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1304748  similar to cDNA sequence BC006662  RGD1304748_predicted  similar to cDNA sequence BC006662 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1304748_predicted  similar to cDNA sequence BC006662 (predicted)  LOC290500_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC290500_predicted  similar to cDNA sequence BC006662 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL