H2bw2l (H2B.W histone 2 like) - Rat Genome Database

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Gene: H2bw2l (H2B.W histone 2 like) Rattus norvegicus
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Symbol: H2bw2l
Name: H2B.W histone 2 like
RGD ID: 9462175
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: histone H2B type 1-B-like; histone H2B-like; late histone H2B.L4-like; LOC103690887; LOC679105; similar to histone 1, H2ba
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X105,062,527 - 105,063,153 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.2X100,270,252 - 100,271,157 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X107,584,573 - 107,585,146 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X107,463,615 - 107,464,186 (+)NCBIRnor_5.0Rnor_5.0rn5
CeleraX101,103,832 - 101,104,405 (+)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse:




References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in H2bw2l
1 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X97528096142528096Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X80434318125434318Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX92979612117740458Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX45182909117740458Rat
2302047Pia34Pristane induced arthritis QTL 345.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)1996916163141916163Rat


Expression

RNA-SEQ Expression

ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
sensory system
visual system
1 3 3 3 5 1 1

Sequence


RefSeq Acc Id: XM_039100159   ⟹   XP_038956087
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X105,062,527 - 105,063,153 (+)NCBI
mRatBN7.2X100,270,252 - 100,271,157 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038956087 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038956087   ⟸   XM_039100159


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1603 BioCyc
NCBI Gene LOC103690887 ENTREZGENE
PhenoGen H2bw2l PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 H2bw2l  H2B.W histone 2 like  LOC103690887  late histone H2B.L4-like  Symbol and Name Changed 1299863 APPROVED
2015-07-29 LOC103690887  late histone H2B.L4-like  LOC679105  similar to histone 1, H2ba  Data merged from RGD:1591887 737654 PROVISIONAL
2014-08-25 LOC103690887  late histone H2B.L4-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC679105  similar to histone 1, H2ba      Symbol and Name status set to provisional 70820 PROVISIONAL