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Gene: Tmem132d (transmembrane protein 132D) Rattus norvegicus

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Symbol:

Tmem132d

Name:

transmembrane protein 132D

RGD ID:

735062

Description:

Predicted to be located in membrane. Orthologous to human TMEM132D (transmembrane protein 132D); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein; LOC288750; mature OL transmembrane protein; mature oligodendrocyte transmembrane protein; mature oligodendrocytes transmembrane protein; MOLT

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM132D (transmembrane protein 132D)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther
Mus musculus (house mouse):	Tmem132d (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem132d (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM132D (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM132D (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem132d (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM132D (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM132D (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem132d (transmembrane protein 132D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	TMEM132C (transmembrane protein 132C)	HGNC	OrthoDB
Homo sapiens (human):	TMEM132E (transmembrane protein 132E)	HGNC	OrthoDB
Homo sapiens (human):	TMEM132B (transmembrane protein 132B)	HGNC	OrthoDB
Alliance orthologs ³
Homo sapiens (human):	TMEM132D (transmembrane protein 132D)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem132d (transmembrane protein 132D)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkeyp-14d3.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-1d7.3	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	si:dkey-112m2.1	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y71H2AM.10	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y71H2AM.10	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	dtn	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	tmem132d	Alliance	DIOPT (OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	tmem132d	Alliance	DIOPT (OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	33,905,971 - 34,553,267 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	33,906,644 - 34,551,317 (+)	Ensembl				GRCr8
mRatBN7.2	12	28,270,039 - 28,917,324 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	28,270,712 - 28,915,374 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	29,413,968 - 30,052,336 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	30,025,411 - 30,663,783 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	29,083,725 - 29,722,960 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	31,934,343 - 32,607,768 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	31,934,343 - 32,607,370 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	33,851,101 - 34,516,557 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	29,495,711 - 29,964,532 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	29,961,960 - 30,603,084 (+)	NCBI		Celera
RGSC_v3.1	12	29,359,093 - 29,827,920 (+)	NCBI
Cytogenetic Map	12	q13-q14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Liver Neoplasms (ISO)

lung small cell carcinoma (ISO)

pre-malignant neoplasm (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthylamine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

4,4'-sulfonyldiphenol (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

Butylbenzyl phthalate (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

dichloroacetic acid (ISO)

dimethylarsinic acid (EXP)

dorsomorphin (ISO)

ethanol (ISO)

fonofos (ISO)

fulvestrant (ISO)

genistein (EXP)

mercury dibromide (ISO)

methapyrilene (ISO)

methoxychlor (EXP)

methylmercury chloride (ISO)

N,N-diethyl-m-toluamide (EXP)

ozone (ISO)

p-chloromercuribenzoic acid (ISO)

parathion (ISO)

permethrin (EXP)

phenobarbital (ISO)

potassium dichromate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

serpentine asbestos (ISO)

temozolomide (ISO)

terbufos (ISO)

titanium dioxide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

Cellular Component

membrane (IBA,IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Molecular cloning of a novel transmembrane protein MOLT expressed by mature oligodendrocytes.	Nomoto H, etal., J Biochem (Tokyo) 2003 Aug;134(2):231-8.
2.	GOA pipeline	RGD automated data pipeline
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:19389623

Genomics

Comparative Map Data

Tmem132d
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	33,905,971 - 34,553,267 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	12	33,906,644 - 34,551,317 (+)	Ensembl				GRCr8
mRatBN7.2	12	28,270,039 - 28,917,324 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	28,270,712 - 28,915,374 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	12	29,413,968 - 30,052,336 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	30,025,411 - 30,663,783 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	29,083,725 - 29,722,960 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	31,934,343 - 32,607,768 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	31,934,343 - 32,607,370 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	12	33,851,101 - 34,516,557 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	12	29,495,711 - 29,964,532 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	12	29,961,960 - 30,603,084 (+)	NCBI		Celera
RGSC_v3.1	12	29,359,093 - 29,827,920 (+)	NCBI
Cytogenetic Map	12	q13-q14	NCBI

TMEM132D
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	129,071,726 - 129,904,025 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	129,071,725 - 129,904,025 (-)	Ensembl			hg38	GRCh38
GRCh37	12	129,556,271 - 130,388,570 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	128,122,224 - 128,954,166 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	12	129,169,510 - 129,999,521 (-)	NCBI		Celera
Cytogenetic Map	12	q24.33	NCBI
HuRef	12	126,540,674 - 127,373,755 (-)	NCBI		HuRef
CHM1_1	12	129,377,103 - 130,206,983 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	129,103,059 - 129,940,259 (-)	NCBI		T2T-CHM13v2.0

Tmem132d
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	127,860,555 - 128,510,141 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	127,858,694 - 128,510,141 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	127,783,491 - 128,433,077 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	127,781,630 - 128,433,077 (-)	Ensembl			mm10	GRCm38
MGSCv37	5	128,263,861 - 128,938,937 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	128,072,694 - 128,747,770 (-)	NCBI		MGSCv36	mm8
Celera	5	124,820,557 - 125,462,636 (-)	NCBI		Celera
Cytogenetic Map	5	G1.3	NCBI
cM Map	5	66.32	NCBI

Tmem132d
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955482	1,672,267 - 2,165,302 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM132D
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	137,143,723 - 137,964,704 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	137,141,843 - 137,961,720 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	126,695,759 - 127,517,557 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	130,916,623 - 131,537,582 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

TMEM132D
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	2,152,137 - 2,664,517 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	2,074,424 - 2,662,470 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	2,349,285 - 2,873,779 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	2,394,914 - 2,922,529 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	2,316,723 - 2,914,971 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	2,329,743 - 2,855,051 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	2,426,973 - 2,952,018 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	2,337,698 - 2,862,992 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tmem132d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	123,595,722 - 124,090,049 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936660	631,033 - 1,125,358 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM132D
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	25,144,430 - 25,913,052 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	25,144,440 - 25,919,018 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	26,796,369 - 27,458,347 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM132D
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	124,425,472 - 125,256,613 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	119,851,305 - 120,683,599 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem132d
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624747	26,402,346 - 26,886,135 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Variants

Variants in Tmem132d
4622 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	70
Count of miRNA genes:	65
Interacting mature miRNAs:	67
Transcripts:	ENSRNOT00000011181
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	24805022	52308831	Rat
70213	Niddm27	Non-insulin dependent diabetes mellitus QTL 27	3.72		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	11200494	52308831	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
8693635	Alc28	Alcohol consumption QTL 28	2.7	0.439	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	50386405	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	25989355	52308831	Rat
5684888	Pia42	Pristane induced arthritis QTL 42			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	3489416	48489416	Rat
1331739	Hrtrt14	Heart rate QTL 14	3.56232		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	12	1	38687564	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	18473041	52308831	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200497	52308831	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	15264248	52308831	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	11743528	52308831	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	11200494	52308831	Rat
2293684	Bmd26	Bone mineral density QTL 26	4.4	0.0002	femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	12	1	38635130	Rat
70169	Eae13	Experimental allergic encephalomyelitis QTL 13		0.032	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	12	29775522	42298555	Rat
1600386	Calcic2	Intracellular calcium level QTL 2		0.001	platelet physiology trait (VT:0005464)	platelet intracellular calcium level (CMO:0000922)	12	33700432	46784661	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	17464979	46784661	Rat
1556747	Calcic1	Intracellular calcium level QTL 1		3.6	platelet calcium amount (VT:0010500)	platelet intracellular calcium level (CMO:0000922)	12	33700432	46784661	Rat
1300175	Cm5	Cardiac mass QTL 5	3.78		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	12	33700432	51558799	Rat
631829	Alc6	Alcohol consumption QTL 6	4.7		consumption behavior trait (VT:0002069)	ethanol drink intake rate (CMO:0001407)	12	34243475	43352593	Rat
1331786	Kidm11	Kidney mass QTL 11	3.571		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	12	16187438	52308831	Rat
8693658	Alc33	Alcohol consumption QTL 33	2.1	0.68	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	12	28717718	49212240	Rat
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	16135029	52308831	Rat
1331761	Bp218	Blood pressure QTL 218	2.973		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	12	16187438	51213550	Rat
1331763	Wbc2	White blood cell count QTL 2	3.162		leukocyte quantity (VT:0000217)	total white blood cell count (CMO:0000365)	12	11200494	52308831	Rat
61416	Pia4	Pristane induced arthritis QTL 4	8.4		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	12	18749469	36488809	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	11200494	52308831	Rat
7387292	Kidm42	Kidney mass QTL 42	3.03	0.0004	kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	12	1	41361854	Rat
61421	Cia12	Collagen induced arthritis QTL 12	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	18749469	34312613	Rat
1300157	Rf21	Renal function QTL 21	4.4		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	12	29636637	37764351	Rat
1298081	Cia25	Collagen induced arthritis QTL 25	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	12	2747694	47747694	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	18473041	52308831	Rat
2303575	Insul14	Insulin level QTL 14	4		blood insulin amount (VT:0001560)	blood insulin level (CMO:0000349)	12	3087180	48087180	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat
7243862	Mcs30	Mammary carcinoma susceptibility QTL 30	8.62		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	12	5633306	50633306	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	16135029	52308831	Rat
2293086	Iddm30	Insulin dependent diabetes mellitus QTL 30	3.82		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	7901625	33938215	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	11200494	52308831	Rat

Markers in Region

D12Rat15

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	33,938,048 - 33,938,215 (+)	Marker Load Pipeline
mRatBN7.2	12	28,302,123 - 28,302,290 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	31,975,424 - 31,975,590	NCBI	Rnor6.0
Rnor_5.0	12	33,889,635 - 33,889,801	UniSTS	Rnor5.0
RGSC_v3.4	12	29,369,536 - 29,369,703	RGD	RGSC3.4
RGSC_v3.4	12	29,369,537 - 29,369,703	UniSTS	RGSC3.4
RGSC_v3.1	12	29,232,924 - 29,233,091	RGD
SHRSP x BN Map	12	33.01	UniSTS
SHRSP x BN Map	12	33.01	RGD
Cytogenetic Map	12	q14	UniSTS

D12Rat14

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	34,258,618 - 34,258,781 (+)	Marker Load Pipeline
mRatBN7.2	12	28,622,665 - 28,622,828 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,305,020 - 32,305,182	NCBI	Rnor6.0
Rnor_5.0	12	34,217,211 - 34,217,373	UniSTS	Rnor5.0
RGSC_v3.4	12	29,691,240 - 29,691,403	RGD	RGSC3.4
RGSC_v3.4	12	29,691,241 - 29,691,403	UniSTS	RGSC3.4
Celera	12	30,315,420 - 30,315,582	UniSTS
RGSC_v3.1	12	29,554,629 - 29,554,791	RGD
RH 3.4 Map	12	478.4	UniSTS
RH 3.4 Map	12	478.4	RGD
RH 2.0 Map	12	388.6	RGD
SHRSP x BN Map	12	33.03	RGD
Cytogenetic Map	12	q14	UniSTS

D12Rat76

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	33,942,434 - 33,942,526 (+)	Marker Load Pipeline
mRatBN7.2	12	28,306,509 - 28,306,601 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	31,979,810 - 31,979,901	NCBI	Rnor6.0
Rnor_5.0	12	33,894,021 - 33,894,112	UniSTS	Rnor5.0
RGSC_v3.4	12	29,373,811 - 29,374,160	RGD	RGSC3.4
RGSC_v3.4	12	29,373,923 - 29,374,014	UniSTS	RGSC3.4
Celera	12	29,999,392 - 29,999,483	UniSTS
RGSC_v3.1	12	29,237,311 - 29,237,402	RGD
RH 3.4 Map	12	472.0	UniSTS
RH 3.4 Map	12	472.0	RGD
RH 2.0 Map	12	350.6	RGD
SHRSP x BN Map	12	33.01	RGD
Cytogenetic Map	12	q14	UniSTS

D12Rat93

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	12	34,243,475 - 34,243,581 (+)	Marker Load Pipeline
mRatBN7.2	12	28,607,526 - 28,607,632 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,289,782 - 32,289,887	NCBI	Rnor6.0
Rnor_5.0	12	34,202,298 - 34,202,403	UniSTS	Rnor5.0
RGSC_v3.4	12	29,675,889 - 29,675,994	UniSTS	RGSC3.4
RGSC_v3.4	12	29,675,888 - 29,675,994	RGD	RGSC3.4
Celera	12	30,300,214 - 30,300,319	UniSTS
RGSC_v3.1	12	29,539,264 - 29,539,445	RGD
SHRSP x BN Map	12	33.01	UniSTS
SHRSP x BN Map	12	33.01	RGD
Cytogenetic Map	12	q14	UniSTS

D12Got74

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,588,507 - 28,588,641 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,270,747 - 32,270,880	NCBI	Rnor6.0
Rnor_5.0	12	34,183,660 - 34,183,793	UniSTS	Rnor5.0
RGSC_v3.4	12	29,655,671 - 29,655,805	RGD	RGSC3.4
RGSC_v3.4	12	29,655,672 - 29,655,805	UniSTS	RGSC3.4
Celera	12	30,281,050 - 30,281,183	UniSTS
RGSC_v3.1	12	29,519,060 - 29,519,193	RGD
RH 3.4 Map	12	511.0	UniSTS
RH 3.4 Map	12	511.0	RGD
RH 2.0 Map	12	379.5	RGD
Cytogenetic Map	12	q14	UniSTS

BE120393

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,328,824 - 28,328,994 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,002,125 - 32,002,294	NCBI	Rnor6.0
Rnor_5.0	12	33,916,336 - 33,916,505	UniSTS	Rnor5.0
RGSC_v3.4	12	29,396,238 - 29,396,407	UniSTS	RGSC3.4
Celera	12	30,021,675 - 30,021,844	UniSTS
RH 3.4 Map	12	473.2	UniSTS
Cytogenetic Map	12	q14	UniSTS

AU049323

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,588,492 - 28,588,675 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,270,732 - 32,270,914	NCBI	Rnor6.0
Rnor_5.0	12	34,183,645 - 34,183,827	UniSTS	Rnor5.0
RGSC_v3.4	12	29,655,657 - 29,655,839	UniSTS	RGSC3.4
Celera	12	30,281,035 - 30,281,217	UniSTS
Cytogenetic Map	12	q14	UniSTS

BG376800

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,762,538 - 28,762,632 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,462,160 - 32,462,253	NCBI	Rnor6.0
Rnor_5.0	12	34,370,003 - 34,370,096	UniSTS	Rnor5.0
RGSC_v3.4	12	29,835,354 - 29,835,447	UniSTS	RGSC3.4
Celera	12	30,448,082 - 30,448,175	UniSTS
RH 3.4 Map	12	539.7	UniSTS
Cytogenetic Map	12	q14	UniSTS

BF393753

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,284,190 - 28,284,305 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	31,947,821 - 31,947,935	NCBI	Rnor6.0
Rnor_5.0	12	33,864,373 - 33,864,487	UniSTS	Rnor5.0
RGSC_v3.4	12	29,352,975 - 29,353,089	UniSTS	RGSC3.4
Celera	12	29,975,279 - 29,975,393	UniSTS
RH 3.4 Map	12	473.9	UniSTS
Cytogenetic Map	12	q14	UniSTS

BF406235

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,837,291 - 28,837,448 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,533,922 - 32,534,078	NCBI	Rnor6.0
Rnor_5.0	12	34,442,195 - 34,442,351	UniSTS	Rnor5.0
RGSC_v3.4	12	29,890,369 - 29,890,525	UniSTS	RGSC3.4
Celera	12	30,524,141 - 30,524,297	UniSTS
RH 3.4 Map	12	505.1	UniSTS
Cytogenetic Map	12	q14	UniSTS

AU047820

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,294,064 - 28,294,266 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	31,958,824 - 31,959,025	NCBI	Rnor6.0
Rnor_5.0	12	33,875,046 - 33,875,247	UniSTS	Rnor5.0
RGSC_v3.4	12	29,361,423 - 29,361,624	UniSTS	RGSC3.4
Celera	12	29,986,913 - 29,987,114	UniSTS
Cytogenetic Map	12	q14	UniSTS

BG375003

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,272,914 - 28,273,035 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	31,936,546 - 31,936,666	NCBI	Rnor6.0
Rnor_5.0	12	33,853,098 - 33,853,218	UniSTS	Rnor5.0
RGSC_v3.4	12	29,341,700 - 29,341,820	UniSTS	RGSC3.4
Celera	12	29,964,004 - 29,964,124	UniSTS
RH 3.4 Map	12	473.9	UniSTS
Cytogenetic Map	12	q14	UniSTS

STS-Z41378

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	28,340,945 - 28,341,480 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	32,014,434 - 32,014,968	NCBI	Rnor6.0
Rnor_5.0	12	33,928,645 - 33,929,179	UniSTS	Rnor5.0
RGSC_v3.4	13	94,179,328 - 94,179,984	UniSTS	RGSC3.4
RGSC_v3.4	12	29,407,439 - 29,407,973	UniSTS	RGSC3.4
Celera	13	89,835,024 - 89,835,680	UniSTS
Celera	12	30,033,153 - 30,033,687	UniSTS
Cytogenetic Map	12	q14	UniSTS

fj36f03.x1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	15	45,144,029 - 45,145,335 (+)	MAPPER	mRatBN7.2
mRatBN7.2	12	28,818,222 - 28,819,087 (+)	MAPPER	mRatBN7.2
Rnor_6.0	15	51,750,128 - 51,751,433	NCBI	Rnor6.0
Rnor_6.0	12	32,514,855 - 32,515,719	NCBI	Rnor6.0
Rnor_5.0	15	55,475,975 - 55,477,278	UniSTS	Rnor5.0
Rnor_5.0	12	34,423,128 - 34,423,992	UniSTS	Rnor5.0
Cytogenetic Map	12	q14	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
14	2	60	129	56	62	38	10	38	6	207	83	1	117	70	77	24	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_198727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB100356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000011181 ⟹ ENSRNOP00000011181

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	33,906,644 - 34,551,317 (+)	Ensembl
mRatBN7.2 Ensembl	12	28,270,712 - 28,915,374 (+)	Ensembl
Rnor_6.0 Ensembl	12	31,934,343 - 32,607,370 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085464 ⟹ ENSRNOP00000070666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	32,103,198 - 32,607,281 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000162269 ⟹ ENSRNOP00000101845

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	12	33,906,644 - 34,551,317 (+)	Ensembl

RefSeq Acc Id:

NM_198727 ⟹ NP_942022

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	33,906,644 - 34,551,317 (+)	NCBI
mRatBN7.2	12	28,270,712 - 28,915,374 (+)	NCBI
Rnor_6.0	12	31,934,343 - 32,607,370 (+)	NCBI
Rnor_5.0	12	33,851,101 - 34,516,557 (+)	NCBI
RGSC_v3.4	12	29,495,711 - 29,964,532 (+)	RGD
Celera	12	29,961,960 - 30,603,084 (+)	RGD

Sequence:

show sequence

TCCACGGAGGAGCAGAGAACCCGCGCTCCGCGTCTCCAGGATGTGCCCATCTGAGATGGGGACG
CTGTGGTACCTCTGGTCTCCGGTACTCATCAGCCTAGCTGCCCTGTTCTCCAAAGTGACGGAAG
GCCGAGGGATCCTGGAGAGCATTCAGCGGTTCTCACTGCTGCCTACCTACCTCCCGGTGACCTA
CCACATCAACAATGCTGATGTCTCCTTCTTCCTAAAGGAGGCCAACCAGGACATCATGCGCAAT
TCCAGCCTGCAGTCGCGGGTCGAGTCCTTCCTGATCTACAAATCCAGGCGACTGCCAGTGCTCA
ACGCCAGCTACGGGCCCTTCTCACTTGAGCAGGTAGTGCCCCAGGACTTGATGCTGCCTTCCAA
CCCATTCGGATTCACTAACACTTTCTCTCTTAACTGGAGGCTGAAGGCCTACATCTTGCAGGAG
AAAGTCTACCTGAGCCATCCCAAAGTGCAGGTGCTCTTCCACATCGTGGGCCGAGACTGGGATG
ACCACAGGGACGAGAACTTGCCTTGCCTGCGGGTTTTTGCTTTCCGAGAGACCCAAGAGGTTCG
AGGTAGCTGCCGGCTGGGTGGGGCCCTGGGGCTGTGCGTGGCCCAGCTGGAAATGCTGCCGGGC
TGGTTCAGTCCCCCATCAGTGGTGTCTGGGCGCAGGAGGCCCACAGAGCAGCCAGAAGGGAGTC
CTGTGGAACTGTATTACGCTGTACAGCCAGGGGATGAGCGAGGTGACTGTGCCAAGGAGGACTC
GAGGAAGAGCCGTGGGCCTCCAGCAGGCCACAATGATGTTGATGAATCCAGTCCCCCTTTGCAT
AGAATTGGGAGCGTCTTCCTTCGGGAGACCCCCAGCAGTCCACCTTTGAGGGAGCTGCGTTTGG
ATAGCAACGTGGCCGTTCACTATATCCCCAAGACTGTGCGACAAGGAGATGTCCTCACCTTCCC
TATCTCTGTCTCTAGGAACTGCACGGAGGATCGCTTCACACTGAGGGCCAAGGTTAAGAAAGGA
GTGAGCATTGTTGGGGTGAGAGCCAGCACTTCTTCTCTCTGGGACGTCAAGCAGAGCACGGAGT
ACACTGGGAAGTACGCACCAGCGGTTATCATCTGTCAAAAGAAATCTGCTGGCTCAGGAAAGAG
TGTGGATGATGCCTCCTACGAAGTCATGAAGATTGACATCGAGGTCGAAGCACCCAGTGACCCG
CCCACCACACAGCTCGTGACATGGCAGGTTGAATACCCAGGAGAGATCACGTCTGACCTGGGGG
TGTCCAAGATCTACGTGAGCCAGAAGGACTTGATTGGAGTCATACCACTAGCCATGGAGGCAGA
GATCCTGAACACGGCCATCCTCACTGGGAAAACAGTGGCTGTCCCTGTGAAGGTGATCTCAGTA
GAGGAAGATGGCACAGTACAAGGGCTGTCGGACTCGGTGGAGTGCAGGTCATCCGATGAAGATG
TGGTTAAGGTTTCTGACAGATGTGACTATGTCTTCGTCAATGGGAAGGAAATGAAGGGCAAGGT
GAACGTGGTTGTCACCATCACCTACCAGCACCTGAGCAGCCCCCTGGAGATGACAGTGTGGGTG
CCACGGCTACCCCTGCAGATCGAGGTCTCAGACATGGAGCTAAACCAGATCAAGGGCTGGCGGG
TCCCCGTTGTCTCCAACAAAAGGCCAGCTCGGGACAGTGAGGAGGAAGATGATGACGAGAAGAG
GGGCCGAGGCTGCACCCTTCAGTACCAACACGCCATGGTGCGAGTCTTGACCCAATTCGTGGCT
GAGGCACCTGATCCCGGGGGACACCTGGCCCACCTGCTGGGCTCTGACTGGCAGGTGGACATCA
CGGAGCTGATCACTGACTTCATGCAGGTGGAGGAGCCCAGGATCGCTAAGCTGCAAGGAGGGCA
GATCCTGACTGGCCAGGAGCTGGGCATGACCACTATTCAGATCCTGTCCCCTCTGTCGGATGCC
ATCCTTGCCGAGAAGACCATCACCGTGCTGGATGAGAAGGTGACCATCACAGACCTCGGGGTCC
AGCTGGTAACGGGACTGTCACTATCCCTGCAGCTCAGCCCTGGGAGCAACAGAGCCATTTTTGC
CACTGCAGTGGCTCAGGAACTTCTGCAGAGGCCCAAACAGGAAGCGGCCATCAGTTGTTGGGTG
CAGTTCAGCGATGGCTCTGTCACACCCTTGGACATTTATGATGAGAAGGACTTCTCCCTGATGG
CTACGTCCTTGGACGAGAAGGTTGTCTCCATCCTCCAGGACCCCAAATTCAAGTGGCCTATCAT
TGCTGCGGAAAACGAAGGACAGGGGGCCCTGGTGAAGGTAGAGATGCTGATCAGCGAGTCTTGT
CAGAAGTCAAAGCGGAAGAGCGTGTTGGCTGTGGGAACAGCCAGCATCAAGGTTAAATTTGGAC
AGAACGATGCGAACCCCAATGGTAGTGAGAGCGGACATCTTGGGGCTGGGCTTCATGTGGAGAA
TATCAATGACAGGAGGTCCAAAAAGCCTTTTCAGGAATGGGGGAGCCCTGAGGGACCATACTAC
AGCAGCTCATCCATGGGACTCATGGAAGGATGGGGCAGTACAACTAAGAGGCCAACCTTCCCGA
AGAAGGAAGGCCAGGAAAACCTGTTAGATGACATCATCCTCTCGCAGACCATGGCCACAGATCT
CACCAGCTTCCCAGACCAGGTGGACCTCCCTGGGAGCAACGTGGGCACTGAGGAACATGACCCT
GATCAAGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCATGTATGCTCTGCTGGGTGTCTTCT
GCCTGGCTATCTTGGTGTTCTTAATTAACTGTGTGACCTTTGCCCTGAAGTACAGGCACAAACA
GGTTCCCTTTGAGGAGCAAGAAGGTCTGAGTCACTCTCACGACTGGGTTGGGCTGAGCAACCGG
ACAGAGCTCTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGAGGAGCAGATCACTGCCATTG
ACAGGGGTCTGGACTTTGAGGAGAGCAAACTCCTTCTCAGCTCAAACTCTCAGAACAGCATCAA
CGGACAGCTGTTCAGGTCCACAGGAGCCATGCTCACAGATGACAAAGAACAGAAGAGCGAACCC
CCTACGTCCCCTACCTCCAAAAGGAAAAGAGTGACATTTTCCACATTCTCCGCCATCTCCTCAG
ACGACGGGTGTCCTTCTGGGAACACCATGGTGTTGAGTAACGAGGATGATATTAAGTGGGTCTG
CCAGGCCCTGGATCCTGGCGAGTGCCCAGAACCTCACAGTTGCATGGAGCGGCTACATGAGCAC
GTGTAACAGAGACACCCAAGTTTGTCTTCCTTTCAGCCTTTAACCCACTTGGGTATGGGGAGGA
GACACTCACCCAGGGGAGAAATGAGACAAG

hide sequence

RefSeq Acc Id:

XM_017598307 ⟹ XP_017453796

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	33,905,971 - 34,553,267 (+)	NCBI
mRatBN7.2	12	28,270,039 - 28,917,324 (+)	NCBI
Rnor_6.0	12	31,934,396 - 32,607,768 (+)	NCBI

Sequence:

show sequence

GATGGGGACGCTGTGGTACCTCTGGTCTCCGGTACTCATCAGCCTAGCTGCCCTGTTCTCCAAA
GGGCCAAGGTTAAGAAAGGAGTGAGCATTGTTGGGGTGAGAGCCAGCACTTCTTCTCTCTGGGA
CGTCAAGCAGAGCACGGAGTACACTGGGAAGTACGCACCAGCGGTTATCATCTGTCAAAAGAAA
TCTGCTGGCTCAGGAAAGAGTGTGGATGATGCCTCCTACGAAGTCATGAAGATTGACATCGAGG
TCGAAGCACCCAGTGACCCGCCCACCACACAGCTCGTGACATGGCAGGTTGAATACCCAGGAGA
GATCACGTCTGACCTGGGGGTGTCCAAGATCTACGTGAGCCAGAAGGACTTGATTGGAGTCATA
CCACTAGCCATGGAGGCAGAGATCCTGAACACGGCCATCCTCACTGGGAAAACAGTGGCTGTCC
CTGTGAAGGTGATCTCAGTAGAGGAAGATGGCACAGTACAAGGGCTGTCGGACTCGGTGGAGTG
CAGGTCATCCGATGAAGATGTGGTTAAGGTTTCTGACAGATGTGACTACGTCTTCGTCAATGGG
AAGGAAATGAAGGGCAAGGTGAACGTGGTGGTCACCGTCACCTACCAGCACCTGAGCAGCCCCC
TGGAGATGACAGTGTGGGTGCCACGGCTACCCCTGCAGATCGAGGTCTCAGACATGGAGCTAAA
CCAGATCAAGGGTTGGCGGGTCCCCGTTGTCTCCAACAAAAGGCCAGCTCGGGACAGTGAGGAG
GAAGATGATGACGAGAAGAGGGGCCGAGGCTGCACCCTTCAGTACCAACACGCCATGGTGCGAG
TCTTGACCCAATTCGTGGCTGAGGCACCTGATCCCGGGGGACACCTGGCCCACCTGCTGGGCTC
TGACTGGCAGGTGGACATCACGGAGCTGATCACTGACTTCATGCAGGTGGAGGAGCCCAGGATC
GCTAAGCTGCAAGGAGGGCAGATCCTGACTGGCCAGGAGCTGGGCATGACCACTATCCAGATCC
TGTCCCCTCTGTCGGATGCCATCCTTGCCGAGAAGACCATCACCGTGCTGGATGAGAAGGTGAC
CATCACAGACCTCGGGGTCCAGCTGGTAACGGGACTGTCACTATCCCTGCAGCTCAGCCCTGGG
AGCAACAGAGCCATTTTTGCCACTGCAGTGGCTCAGGAACTTCTGCAGAGGCCCAAACAGGAAG
CGGCCATCAGTTGTTGGGTGCAGTTCAGCGATGGCTCTGTCACACCCTTGGACATTTATGATGA
GAAGGACTTCTCCCTGATGGCTACGTCCTTGGACGAGAAGGTTGTCTCCATCCTCCAGGACCCC
AAATTCAAGTGGCCTATCATTGCTGCGGAAAACGAAGGACAGGGGGCCCTGGTGAAGGTAGAGA
TGCTGATCAGCGAGTCTTGTCAGAAGTCAAAGCGGAAGAGCGTGTTGGCTGTGGGAACAGCCAG
CATCAAGGTTAAATTTGGACAGAACGATGCGAACCCCAATGGTAGTGAGAGCGGACATCTTGGG
GCTGGGCTTCATGTGGAGAATATCAATGACAGGAGGTCCAAAAAGCCTTTTCAGGAATGGGGGA
GCCCTGAGGGACCATACTACAGCAGCTCATCCATGGGACTCATGGAAGGATGGGGCAGTACAAC
TAAGAGGCCAACCTTCCCGAAGAAGGAAGGCCAGGAAAACCTGTTAGATGACATCATCCTCTCG
CAGACCATGGCCACAGATCTCACCAGCTTCCCAGACCAGGTGGACCTCCCTGGGAGCAACGTGG
GCACTGAGGAACATGACCCTGATCAAGCAGCCAAGGGGCTGAGTGACCTCGAAATTGGCATGTA
TGCTCTGCTGGGTGTCTTCTGCCTGGCTATCTTGGTGTTCTTAATTAACTGTGTGACCTTTGCC
CTGAAGTACAGGCACAAACAGGTTCCCTTTGAGGAGCAAGAAGGTCTGAGTCACTCTCACGACT
GGGTTGGGCTGAGCAACCGGACAGAGCTCTTGGGGAACCATATGAACTTCGCCTCCTCCCAAGA
GGAGCAGATCACTGCCATTGACAGGGGTCTGGACTTTGAGGAGAGCAAACTCCTTCTCAGCTCA
AACTCTCAGAACAGCATCAACGGACAGCTGTTCAGGTCCACAGGAGCCATGCTCACAGATGACA
AAGAACAGAAAAGCGAACCCCCTACGTCCCCTACCTCCAAAAGGAAAAGAGTGACATTTTCCAC
ATTCTCCGCCATCTCCTCAGACGACGGGTGTCCTTCTGGGAACACCATGGTGTTGAGTAACGAG
GATGATATTAAGTGGGTCTGCCAGGCCCTGGATCCTGGCGAGTGCCCAGAACCTCACAGTTGCA
TGGAGCGGCTACATGAGCACGTGTAACAGAGACACCAATGTTGTTCTTACCTTTCAGCCTTTAA
CCCACTTGGGTATGGGGAGGAGACACTCACCCAGGGGAGAAATGAGACAAGAGGACACCACAAG
GGCAGCACTGTTCATAGAACCCTGGGAAATGGTCGCCTCTTAGCTGGGGAGACCCGGGATCGGT
ACCCACACACAGGCCATAGTGCACGATGATTCTTAAGAGGTTTACTGTGCATGGCAAGATGTTG
TCAAATCTGAACAAAGAGGCGTGTTTAAGGGTTTGCAGGGAAGTACTCCCTCAATTTGGTTTTT
TTCAGATCCATGCCGCTCCGATAATCACTATTTAGACCATGAAAAAGAGGGGGGAAAACGGGCA
AGGTTCAGGTTGAGCGTGCATGGATCGGAGGGAAGAGACACGGCATCTGAGTGGATCAGCAGGG
CTGACTCTAAGTGTACTCACAGGCAGACTGTAGAACTGAAGCTGGCTGCCGAAAGCAGGGTATT
G

hide sequence

Protein Sequences


Protein RefSeqs	NP_942022	(Get FASTA)	NCBI Sequence Viewer
	XP_017453796	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAC97816	(Get FASTA)	NCBI Sequence Viewer
	EDM13530	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011181
	ENSRNOP00000011181.4
GenBank Protein	Q76HP2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_942022 ⟸ NM_198727
- Peptide Label:	precursor
- UniProtKB:	Q76HP2 (UniProtKB/Swiss-Prot), F1M5W0 (UniProtKB/TrEMBL), A6J0U1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MCPSEMGTLWYLWSPVLISLAALFSKVTEGRGILESIQRFSLLPTYLPVTYHINNADVSFFLKE ANQDIMRNSSLQSRVESFLIYKSRRLPVLNASYGPFSLEQVVPQDLMLPSNPFGFTNTFSLNWR LKAYILQEKVYLSHPKVQVLFHIVGRDWDDHRDENLPCLRVFAFRETQEVRGSCRLGGALGLCV AQLEMLPGWFSPPSVVSGRRRPTEQPEGSPVELYYAVQPGDERGDCAKEDSRKSRGPPAGHNDV DESSPPLHRIGSVFLRETPSSPPLRELRLDSNVAVHYIPKTVRQGDVLTFPISVSRNCTEDRFT LRAKVKKGVSIVGVRASTSSLWDVKQSTEYTGKYAPAVIICQKKSAGSGKSVDDASYEVMKIDI EVEAPSDPPTTQLVTWQVEYPGEITSDLGVSKIYVSQKDLIGVIPLAMEAEILNTAILTGKTVA VPVKVISVEEDGTVQGLSDSVECRSSDEDVVKVSDRCDYVFVNGKEMKGKVNVVVTITYQHLSS PLEMTVWVPRLPLQIEVSDMELNQIKGWRVPVVSNKRPARDSEEEDDDEKRGRGCTLQYQHAMV RVLTQFVAEAPDPGGHLAHLLGSDWQVDITELITDFMQVEEPRIAKLQGGQILTGQELGMTTIQ ILSPLSDAILAEKTITVLDEKVTITDLGVQLVTGLSLSLQLSPGSNRAIFATAVAQELLQRPKQ EAAISCWVQFSDGSVTPLDIYDEKDFSLMATSLDEKVVSILQDPKFKWPIIAAENEGQGALVKV EMLISESCQKSKRKSVLAVGTASIKVKFGQNDANPNGSESGHLGAGLHVENINDRRSKKPFQEW GSPEGPYYSSSSMGLMEGWGSTTKRPTFPKKEGQENLLDDIILSQTMATDLTSFPDQVDLPGSN VGTEEHDPDQAAKGLSDLEIGMYALLGVFCLAILVFLINCVTFALKYRHKQVPFEEQEGLSHSH DWVGLSNRTELLGNHMNFASSQEEQITAIDRGLDFEESKLLLSSNSQNSINGQLFRSTGAMLTD DKEQKSEPPTSPTSKRKRVTFSTFSAISSDDGCPSGNTMVLSNEDDIKWVCQALDPGECPEPHS CMERLHEHV hide sequence

RefSeq Acc Id:

XP_017453796 ⟸ XM_017598307

- Peptide Label:

isoform X1

- Sequence:

show sequence

MKIDIEVEAPSDPPTTQLVTWQVEYPGEITSDLGVSKIYVSQKDLIGVIPLAMEAEILNTAILT
GKTVAVPVKVISVEEDGTVQGLSDSVECRSSDEDVVKVSDRCDYVFVNGKEMKGKVNVVVTVTY
QHLSSPLEMTVWVPRLPLQIEVSDMELNQIKGWRVPVVSNKRPARDSEEEDDDEKRGRGCTLQY
QHAMVRVLTQFVAEAPDPGGHLAHLLGSDWQVDITELITDFMQVEEPRIAKLQGGQILTGQELG
MTTIQILSPLSDAILAEKTITVLDEKVTITDLGVQLVTGLSLSLQLSPGSNRAIFATAVAQELL
QRPKQEAAISCWVQFSDGSVTPLDIYDEKDFSLMATSLDEKVVSILQDPKFKWPIIAAENEGQG
ALVKVEMLISESCQKSKRKSVLAVGTASIKVKFGQNDANPNGSESGHLGAGLHVENINDRRSKK
PFQEWGSPEGPYYSSSSMGLMEGWGSTTKRPTFPKKEGQENLLDDIILSQTMATDLTSFPDQVD
LPGSNVGTEEHDPDQAAKGLSDLEIGMYALLGVFCLAILVFLINCVTFALKYRHKQVPFEEQEG
LSHSHDWVGLSNRTELLGNHMNFASSQEEQITAIDRGLDFEESKLLLSSNSQNSINGQLFRSTG
AMLTDDKEQKSEPPTSPTSKRKRVTFSTFSAISSDDGCPSGNTMVLSNEDDIKWVCQALDPGEC
PEPHSCMERLHEHV

hide sequence

Ensembl Acc Id:

ENSRNOP00000070666 ⟸ ENSRNOT00000085464

Ensembl Acc Id:

ENSRNOP00000011181 ⟸ ENSRNOT00000011181

Ensembl Acc Id:

ENSRNOP00000101845 ⟸ ENSRNOT00000162269

Protein Domains

Transmembrane protein family 132 middle Transmembrane protein TMEM132 C-terminal Transmembrane protein TMEM132 cohesin-like Transmembrane protein TMEM132 fifth Transmembrane protein TMEM132 N-terminal Transmembrane protein TMEM132 second Ig-like Transmembrane protein TMEM132 sixth

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q76HP2-F1-model_v2	AlphaFold	Q76HP2	1-1097	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:735062	AgrOrtholog
BioCyc Gene	G2FUF-19452	BioCyc
Ensembl Genes	ENSRNOG00000008447	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000011181	ENTREZGENE
	ENSRNOT00000011181.7	UniProtKB/Swiss-Prot
InterPro	Ig_TMEM132_2nd	UniProtKB/Swiss-Prot
	Ig_TMEM132_5th	UniProtKB/Swiss-Prot
	Ig_TMEM132_6th	UniProtKB/Swiss-Prot
	TMEM132	UniProtKB/Swiss-Prot
	TMEM132_3rd	UniProtKB/Swiss-Prot
	TMEM132_C	UniProtKB/Swiss-Prot
	TMEM132_M	UniProtKB/Swiss-Prot
	TMEM132_N	UniProtKB/Swiss-Prot
KEGG Report	rno:288750	UniProtKB/Swiss-Prot
NCBI Gene	288750	ENTREZGENE
PANTHER	PTHR13388	UniProtKB/Swiss-Prot
	TRANSMEMBRANE PROTEIN 132D	UniProtKB/Swiss-Prot
Pfam	Ig_TMEM132_2nd	UniProtKB/Swiss-Prot
	Ig_TMEM132_5th	UniProtKB/Swiss-Prot
	Ig_TMEM132_6th	UniProtKB/Swiss-Prot
	TMEM132	UniProtKB/Swiss-Prot
	TMEM132_3rd	UniProtKB/Swiss-Prot
	TMEM132D_C	UniProtKB/Swiss-Prot
	TMEM132D_N	UniProtKB/Swiss-Prot
PhenoGen	Tmem132d	PhenoGen
RatGTEx	ENSRNOG00000008447	RatGTEx
UniProt	A0ABK0LLJ3_RAT	UniProtKB/TrEMBL
	A6J0U1	ENTREZGENE, UniProtKB/TrEMBL
	F1M5W0	ENTREZGENE
	Q76HP2	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	F1M5W0	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-04	Tmem132d	transmembrane protein 132D	LOC288750	hypothetical protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-09-30	LOC288750				Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in brain, lung, pancreas, and testis	1302821

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD