Mepe (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 5,725,308 - 5,736,858 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 5,420,634 - 5,432,186 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 5,420,635 - 5,432,183 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 5,383,076 - 5,394,785 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 6,683,285 - 6,694,994 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 5,372,824 - 5,384,370 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 6,782,011 - 6,793,561 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 6,782,012 - 6,793,558 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 6,770,080 - 6,781,630 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 6,529,356 - 6,540,902 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 6,529,355 - 6,540,902 (-) | NCBI | | | | | Celera | 14 | 5,559,406 - 5,571,012 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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MEPE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 87,821,398 - 87,846,792 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 87,821,398 - 87,846,814 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 88,742,550 - 88,767,944 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 88,973,164 - 88,986,968 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 89,111,317 - 89,125,121 | NCBI | | | | | Celera | 4 | 86,030,825 - 86,056,232 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22.1 | NCBI | | | | | HuRef | 4 | 84,488,173 - 84,513,583 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 88,719,352 - 88,744,756 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 91,147,835 - 91,173,227 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Mepe (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 104,473,195 - 104,486,477 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 104,473,195 - 104,486,477 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 104,325,329 - 104,338,611 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 104,325,329 - 104,338,611 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 104,754,348 - 104,767,630 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 101,920,930 - 101,938,649 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 5 | 104,565,678 - 104,578,858 (+) | NCBI | | MGSCv36 | mm8 | | Cytogenetic Map | 5 | E5 | NCBI | | | | | cM Map | 5 | 50.68 | NCBI | | | | |
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Mepe (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955474 | 2,048,883 - 2,064,515 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MEPE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 85,839,530 - 85,853,444 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 86,101,962 - 86,115,875 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 80,125,612 - 80,139,539 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 90,838,938 - 90,864,338 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 90,838,938 - 90,864,332 (+) | Ensembl | panpan1.1 | | panPan2 | |
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MEPE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 32 | 11,212,531 - 11,222,805 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 11,212,531 - 11,222,805 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 30,731,431 - 30,741,705 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 11,266,584 - 11,276,866 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 11,264,740 - 11,276,866 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 11,349,245 - 11,359,519 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 11,174,915 - 11,185,203 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 28,767,808 - 28,778,081 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mepe (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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MEPE (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 131,186,888 - 131,200,330 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 131,186,563 - 131,198,418 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 140,416,700 - 140,430,560 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MEPE (Chlorocebus sabaeus - green monkey) |
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Mepe (Heterocephalus glaber - naked mole-rat) |
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