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Gene: Gpr85 (G protein-coupled receptor 85) Rattus norvegicus

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Symbol:

Gpr85

Name:

G protein-coupled receptor 85

RGD ID:

71011

Description:

Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in endoplasmic reticulum. Predicted to be active in plasma membrane. Orthologous to human GPR85 (G protein-coupled receptor 85); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

MGC105281; PKrCx1; probable G-protein coupled receptor 85; SREB2; Srep2; Super Conserved Receptor Expressed in Brain 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GPR85 (G protein-coupled receptor 85)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB
Mus musculus (house mouse):	Gpr85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gpr85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GPR85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GPR85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gpr85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GPR85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GPR85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gpr85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Gpr85 (G protein-coupled receptor 85)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CMC2 (C-X9-C motif containing 2)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Gpr85 (G protein-coupled receptor 85)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Gpr85 (G protein-coupled receptor 85)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GPR85 (G protein-coupled receptor 85)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	GPR85 (G protein-coupled receptor 85)	Alliance	DIOPT (HGNC\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	gpr85 (G protein-coupled receptor 85)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gpr85	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gpr85	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	43,070,194 - 43,075,662 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	43,060,777 - 43,075,794 (-)	Ensembl				GRCr8
mRatBN7.2	4	42,100,138 - 42,109,584 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	42,102,941 - 42,109,566 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	47,081,230 - 47,085,944 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	43,002,235 - 43,006,953 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	41,410,918 - 41,415,636 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	4	44,810,527 - 44,815,243 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	4	42,240,267 - 42,244,984 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	4	42,803,703 - 42,808,421 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	4	42,625,460 - 42,630,176 (-)	NCBI		F344_StmMcwi
Rnor_6.0	4	40,377,705 - 40,387,147 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	40,381,685 - 40,385,349 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	43,715,383 - 43,721,575 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	39,296,054 - 39,299,722 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	37,448,155 - 37,451,823 (-)	NCBI		Celera
RGSC_v3.1	4	39,414,594 - 39,418,262 (-)	NCBI
Cytogenetic Map	4	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(2,4,5-trichlorophenoxy)acetic acid (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-diaminodiphenylmethane (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

aldehydo-D-glucose (ISO)

ammonium chloride (EXP)

amphetamine (EXP)

antirheumatic drug (ISO)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

bisphenol F (ISO)

cadmium dichloride (EXP)

casticin (ISO)

chloroethene (ISO)

chlorpyrifos (EXP)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

D-glucose (ISO)

decabromodiphenyl ether (EXP)

dextran sulfate (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

fenvalerate (EXP)

fructose (ISO)

glucose (ISO)

ketamine (EXP)

methylmercury chloride (ISO)

mono(2-ethylhexyl) phthalate (ISO)

monosodium L-glutamate (ISO)

ozone (ISO)

paracetamol (ISO)

pravastatin (EXP,ISO)

SB 431542 (ISO)

serpentine asbestos (ISO)

silver atom (ISO)

silver(0) (ISO)

succimer (ISO)

sulforaphane (ISO)

sunitinib (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triclosan (ISO)

tunicamycin (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

G protein-coupled receptor signaling pathway (IEA)

signal transduction (IEA)

Cellular Component

endoplasmic reticulum (IEA,ISO,ISS)

membrane (IEA)

plasma membrane (IBA,IEA,ISO)

Molecular Function

G protein-coupled receptor activity (IBA,IEA)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	An evolutionarily conserved G-protein coupled receptor family, SREB, expressed in the central nervous system.	Matsumoto M, etal., Biochem Biophys Res Commun 2000 Jun 7;272(2):576-82.
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	GOA pipeline	RGD automated data pipeline
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:15893849	PMID:25780553

Genomics

Comparative Map Data

Gpr85
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	43,070,194 - 43,075,662 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	4	43,060,777 - 43,075,794 (-)	Ensembl				GRCr8
mRatBN7.2	4	42,100,138 - 42,109,584 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	42,102,941 - 42,109,566 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	4	47,081,230 - 47,085,944 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	43,002,235 - 43,006,953 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	41,410,918 - 41,415,636 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	4	44,810,527 - 44,815,243 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	4	42,240,267 - 42,244,984 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	4	42,803,703 - 42,808,421 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	4	42,625,460 - 42,630,176 (-)	NCBI		F344_StmMcwi
Rnor_6.0	4	40,377,705 - 40,387,147 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	40,381,685 - 40,385,349 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	4	43,715,383 - 43,721,575 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	4	39,296,054 - 39,299,722 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	4	37,448,155 - 37,451,823 (-)	NCBI		Celera
RGSC_v3.1	4	39,414,594 - 39,418,262 (-)	NCBI
Cytogenetic Map	4	q22	NCBI

GPR85
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	113,082,285 - 113,087,724 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	113,078,331 - 113,087,778 (-)	Ensembl			hg38	GRCh38
GRCh37	7	112,722,340 - 112,727,779 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	112,507,704 - 112,515,069 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	7	112,314,418 - 112,321,730	NCBI
Celera	7	107,533,050 - 107,540,415 (-)	NCBI		Celera
Cytogenetic Map	7	q31.1	NCBI
HuRef	7	107,088,502 - 107,095,858 (-)	NCBI		HuRef
CHM1_1	7	112,654,245 - 112,661,602 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	114,401,309 - 114,406,733 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	112,088,951 - 112,096,319 (-)	NCBI

Gpr85
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	13,834,405 - 13,839,951 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	13,834,457 - 13,839,941 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	6	13,834,406 - 13,839,942 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	13,834,458 - 13,839,942 (-)	Ensembl			mm10	GRCm38
MGSCv37	6	13,785,071 - 13,789,848 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	6	13,785,071 - 13,789,848 (-)	NCBI		MGSCv36	mm8
Celera	6	13,926,839 - 13,931,658 (-)	NCBI		Celera
Cytogenetic Map	6	A1	NCBI
cM Map	6	5.76	NCBI

Gpr85
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955432	19,260,909 - 19,265,744 (-)	Ensembl
ChiLan1.0	NW_004955432	19,260,909 - 19,265,744 (-)	NCBI	ChiLan1.0	ChiLan1.0

GPR85
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	149,912,338 - 149,917,817 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	1,922,598 - 1,928,073 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	105,044,520 - 105,053,488 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	117,747,502 - 117,754,533 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

GPR85
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	52,567,685 - 52,572,600 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	52,569,632 - 52,570,744 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	52,026,661 - 52,031,352 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	52,606,058 - 52,610,777 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	52,605,911 - 52,612,061 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	52,636,327 - 52,641,022 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	52,315,866 - 52,320,549 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	52,693,708 - 52,698,411 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gpr85
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	41,238,757 - 41,242,872 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936589	5,445,687 - 5,452,975 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936589	5,445,721 - 5,456,015 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPR85
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	32,667,488 - 32,672,740 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	18	32,667,331 - 32,675,592 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	35,222,477 - 35,230,734 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPR85
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	81,871,857 - 81,878,117 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	81,873,983 - 81,875,092 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666042	21,915,950 - 21,924,193 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gpr85
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624827	6,280,273 - 6,284,302 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624827	6,279,094 - 6,288,243 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Gpr85
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	6	124,728,134 - 124,734,376 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gpr85
22 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	373
Count of miRNA genes:	219
Interacting mature miRNAs:	267
Transcripts:	ENSRNOT00000039005
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2302371	Stl22	Serum triglyceride level QTL 22	5.15		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	13080146	58080146	Rat
2303585	Bw86	Body weight QTL 86	4		body mass (VT:0001259)	body weight (CMO:0000012)	4	15644309	60644309	Rat
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	35113290	80113290	Rat
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	39431983	123203361	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	41400577	86400577	Rat
8552906	Pigfal3	Plasma insulin-like growth factor 1 level QTL 3			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	4	11038706	56038706	Rat
8655949	Rf62	Renal function QTL 62	22		blood urea nitrogen amount (VT:0005265)	plasma urea nitrogen level (CMO:0000586)	4	35396600	45429897	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	27730518	170099664	Rat
1331807	Rf31	Renal function QTL 31	2.988		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	4	40490442	75726188	Rat
6478766	Anxrr47	Anxiety related response QTL 47		0.09637	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	4	11038706	56038706	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		0.0003	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	4	26234499	134199155	Rat
631642	Stl2	Serum triglyceride level QTL 2	3.3		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	5894575	57613242	Rat
6478769	Anxrr48	Anxiety related response QTL 48		0.02514	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	4	11038706	56038706	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	11706604	92690519	Rat
2313401	Anxrr27	Anxiety related response QTL 27			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	4	18900697	63900697	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	37269577	82269577	Rat
631209	Bw2	Body weight QTL2	4.2		retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	1	45429897	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	27862204	126119996	Rat
8694374	Bw155	Body weight QTL 155	3.39	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	4	11038706	56038706	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5889999	148002343	Rat
61475	Aia2	Adjuvant induced arthritis QTL 2	5.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	40471453	75939996	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	41400603	86400603	Rat
2290374	Gluco32	Glucose level QTL 32	6.27		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	4	38144194	45429897	Rat
61412	Pia2	Pristane induced arthritis QTL 2	3.9		joint integrity trait (VT:0010548)	post-insult time to onset of experimental arthritis (CMO:0001450)	4	22288453	63245191	Rat
8552807	Vie4	Viral induced encephalitis QTL 4	7.3		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	18900697	63900697	Rat
6478724	Anxrr35	Anxiety related response QTL 35		0.00449	defecation behavior trait (VT:0010462)	defecation measurement (CMO:0000997)	4	11038706	56038706	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	30448961	82336920	Rat
619616	Bp79	Blood pressure QTL 79		0.0292	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	5889999	50889999	Rat
7387227	Uae40	Urinary albumin excretion QTL 40	2.9	0.0052	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	4	18913151	63913151	Rat
6909122	Insul22	Insulin level QTL 22	4.63		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	4	27862204	62997402	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	41400577	86400577	Rat
1358203	Stl19	Serum triglyceride level QTL 19	2.8	0.002	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	21925151	66925151	Rat
70192	BpQTLcluster5	Blood pressure QTL cluster 5	4.183		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	4	1	63900697	Rat
9590304	Scort17	Serum corticosterone level QTL 17	4.96	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	11038706	56038706	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	40490442	117737312	Rat
11530004	Niddm71	Non-insulin dependent diabetes mellitus QTL 71		0.001	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	4	33538816	53719714	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	33538597	116185060	Rat
1354665	Stl10	Serum triglyceride level QTL 10	3.57		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	4	22288453	45429897	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	12212457	182430611	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	9	64	157	80	79	48	43	48	6	276	137	10	137	68	88	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB040803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF203907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC087727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000039005 ⟹ ENSRNOP00000031780

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,065,452 - 43,075,794 (-)	Ensembl
mRatBN7.2 Ensembl	4	42,102,941 - 42,108,840 (-)	Ensembl
Rnor_6.0 Ensembl	4	40,381,685 - 40,385,349 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100667 ⟹ ENSRNOP00000084618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,063,598 - 43,075,717 (-)	Ensembl
mRatBN7.2 Ensembl	4	42,102,941 - 42,109,566 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000123242 ⟹ ENSRNOP00000102995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,060,777 - 43,075,686 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000142999 ⟹ ENSRNOP00000098842

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,066,024 - 43,075,371 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000149013 ⟹ ENSRNOP00000111229

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,064,329 - 43,075,682 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167546 ⟹ ENSRNOP00000112202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	4	43,064,422 - 43,075,686 (-)	Ensembl

RefSeq Acc Id:

NM_022254 ⟹ NP_071590

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	43,070,194 - 43,074,906 (-)	NCBI
mRatBN7.2	4	42,104,114 - 42,108,826 (-)	NCBI
Dahl_SR_JrHsd	4	44,810,527 - 44,815,243 (-)	NCBI
Lyon_Normotensive	4	42,240,267 - 42,244,984 (-)	NCBI
Lyon_Hypertensive	4	42,803,703 - 42,808,421 (-)	NCBI
F344_StmMcwi	4	42,625,460 - 42,630,176 (-)	NCBI
Rnor_6.0	4	40,381,681 - 40,385,349 (-)	NCBI
Rnor_5.0	4	43,715,383 - 43,721,575 (-)	NCBI
RGSC_v3.4	4	39,296,054 - 39,299,722 (-)	RGD
Celera	4	37,448,155 - 37,451,823 (-)	RGD

Sequence:

show sequence

TGATGCGATCGGTATTTACCCGGGGATGTACCGGTTGGGAAATTAACATCATCGGATGCAGTTC
TGCCTGGGCTTCCATCAGCATATTCCAGATATTCTGATGGCAAATCAAATGGAAGGCAAGAGGA
AGCATGACCACAGATTGGATCTGAACTCTTTGTGGATTACATTTTCAGTAAAATGTATGGATCT
ATCTTTTCCTTGTTCTTATATCTAGATCATGAGACTTGACTGAGGCTGTTTCCTTATCCTCCAT
CCATCTATGGCGAACTATAGCCATGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCTAACAG
CCTTTCTGAAACTGACTTCCTTGGGTTTCATAATAGGAGTCAGTGTGGTGGGCAACCTTCTGAT
CTCCATTTTGCTAGTGAAAGATAAGACCTTGCATAGAGCTCCTTACTACTTCCTGCTGGATCTG
TGCTGCTCAGACATCCTCAGATCTGCAATTTGTTTTCCATTTGTATTCAACTCTGTCAAAAATG
GCTCTACCTGGACTTACGGGACTCTGACTTGCAAAGTGATTGCCTTTCTGGGGGTTTTGTCCTG
TTTCCACACTGCCTTCATGCTCTTCTGCATCAGCGTCACCAGATACTTAGCCATCGCCCATCAC
CGCTTCTATACAAAGAGGCTGACCTTTTGGACGTGTTTGGCTGTGATCTGCATGGTGTGGACTC
TGTCTGTGGCCATGGCATTTCCCCCAGTTTTAGATGTAGGCACCTACTCATTCATTAGGGAGGA
GGATCAGTGTACCTTCCAACACCGCTCCTTCAGGGCTAACGATTCCCTAGGATTTATGCTGCTC
CTTGCTCTCATCCTCCTAGCCACACAGCTTGTCTACCTCAAGCTGATATTTTTTGTCCACGATC
GAAGGAAAATGAAGCCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAACTGGACCTTTCATGGCCC
TGGAGCTAGTGGCCAGGCAGCTGCCAATTGGCTAGCAGGATTTGGAAGGGGTCCCACACCACCC
ACCTTGCTGGGCATCAGGCAAAATGCGAATACCACAGGCAGAAGACGGCTCTTGGTTTTGGATG
AGTTCAAAATGGAGAAAAGAATCAGCAGAATGTTCTATATAATGACTTTCCTCTTCCTAACCTT
GTGGGGTCCCTACCTGGTGGCCTGCTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTACCAGGG
GGATTTCTAACAGCCGCTGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCA
TTTTCTCCAACAGGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTTACTGCAGAAAATCCAG
GTTACCAAGGGAACCTTACTGTGTTATATGAGGGAGCATCTGTAAATCTTTAGCCTTGTGAGAT
ACTAACCCTCTCTGCTAAGCAATTGTGGCCTGTAGCCATGTCTTGAGAAGAAAAAAAAAAGAAA
ACAAGGATGGAATCAGCAGTTGTAAGGATTTGGTCAACGTTCTGCAGTCTTTGCAATAGTTCAC
CTATAATCCTGTTTTAAATCTCAGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGA
AAGGACAGAACCACTGCCCTAAGTTTCTTTCTGTGGGTGAACACTAGATAATGAACGTAGCAGG
TGCTAAGTATCAGTGCTAAATGCTGTGTATATCATCACATATGAAAAAAAACTTAAAAAAACAA
TTAGCATTGGACATTTTAATAAATTAAGTTGACATGAGGTAAATGTGTTGATAAAAGCTAATTT
TAGAAGTTTGAAGACTTTAAAACATTTCATACTATTTTTGTTTTGCAAAGACTACACTACTGGG
GGACTTAACAGTACTGTAATTCTTAAAAAGATGTGCCATGAATTATTGGGGTACAACACTTTAA
ACACGCCTTGTGAGTTTGGGGGAAGCATTCCAAAGCAGTATATTGGTTCCAATTAGAGTTTACC
TTTTTTGTATTAATATATTGCTATTTCTAAATCCCACTTTCCTTCCCTACCAGTGAAATTGCTA
GCATTGAACTGTATTATGTGTTTTTTGTTAATTCAGTAAAAAAAAAAAAAAGTTTCCAGTTTGT
TTCTATTTTACAAATGCTAGATATCTGTCCGGGAGGCAACATGAATGGAATCAACTGACCACAG
ATGAGCAGTTCTAAAAATGCAGAATAAACACGTGTTGCCTTAAAGGGTTATCTAGTATCCTTCA
TCTTCTTTAGCAATGGAGCAAGTAGTCAAGAGGCATTGAACCAGTAACTGGCCATGGCTGTTCA
TTGGGAATTCATGGAAGAGCATTCAATGCTTTCCCCTCTTCCCTCACGTGCTTTGAAAGTTCAA
GTACACACCATTAAGATAATGAGATTTTCTTCTGAGGTGTGCTACCCATTCTAGTGTGTTCTAA
GAAGCAGACAGTTGATATGTGTTTATATTGTAAGTCAGCTGTCAGGGGAGCCCACAGCCTTAGT
GTGACATCTGGCACAATTTGTGAAGCATTTATTGTATGGAAGGCACAGTCTTCTTTATACTTTC
TGCACATTCAGTGTATTGGTCCTTTCGATTATTTCAGTTCTAACTTGTGAAAGCTTATAATATG
ATTTCTGGTATTTTAGAAATACATTAGATTCTGTGAGTCTCATTCTTTAAGATACAGATGTGTG
AACTTCAATATAAAGTTGCATTTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGG

hide sequence

RefSeq Acc Id:

XM_006236124 ⟹ XP_006236186

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	43,070,194 - 43,075,662 (-)	NCBI
mRatBN7.2	4	42,101,160 - 42,109,584 (-)	NCBI
Rnor_6.0	4	40,377,705 - 40,387,147 (-)	NCBI
Rnor_5.0	4	43,715,383 - 43,721,575 (-)	NCBI

Sequence:

show sequence

TTTTACTGCTGTCTCGAGATCAAATTATTACTGTAGAGAGATTTTTTTTTCTATTTCATTAACA
GATTATTATAAAGCAATAAGCTTGCAGGAAGACAAGCAGACGTTTTACCTTGAGATTTAATGAA
AGCGTGCCTGCTAGCTTTTAAAGGGTGAAGAGTGGGTAGTTGTTTAAAATCTTACCCCACCCTC
GCAAAAACTCTTTGGAAATGGGAGAATCGAGAGGAGGATGATTCTTGAGGCGTTCCTAATCACC
AGGTGTCAGACTATGTGGTGTTTGTGGACTGGTCTAACGTGCCAAATCAAAGATCAGCAGGGAA
AAATCATTTGAGAAGAAATCTACAAGGCGCATCCAATGCTTAGCAGGACCACCCTGACAGAGAA
AGGAAGACGATGTTTCGGGAAGGCAAGGGTTCGGGGCAGCTGGGGTGGAGGCGGCGGTCCGCGG
CACGGTGGCTTCGTGCGCTGCCCTAGGGGAAGAGGATGGGCCTGAGGTCCGGGAAGAGCCTTCC
CGAGCCCACCACTGCCAATGCGGGGAGGGAAAAGTTCCGAAGCTGCCTCGAGGGAACAAAAGCC
TGATTTGGGGCCGGCTGAACTGGACTGGACATTGAAGCAAGCCAGCCTGCTCCGGAGACAGGCA
GGGGGCTCCTGCTGGCTCGGCGGAGGCCGGAGCAACCCTCGCCGCCGCCCTCGCCACCGCGCCG
CCGCCGCCGCGGCCCCTGCGTTACTGGGGGAGACGGTGCCGCTGCGACAGGGGAGGACGCGGCT
GGAGCTGAAGGAGGCTCCAACGCGCAGGCGCCGCCGAGCCCTGCCTGGATGCTCAGTCAAGGCA
CTCAGGAAAAAAAAAATCAGCAATTTATAGAAAGAAGAAGCTATAGTCTGTCGGGATATCCAAC
ACCAACAGGGGTGGTGGATTTCAGGTTTCGTAATGTTGCATGATGCGATCGGTATTTACCCGGG
GATGTACCGGTTGGGAAATTAACATCATCGGATGCAGTTCTGCCTGGGCTTCCATCAGCATATT
CCAGATATTCTGATGGCAAATCAAATGGAAGGCAAGAGGAAGCATGACCACAGATTGGATCTGA
ACTCTTTGTGGATTACATTTTCAGTAAAATGTATGGATCTATCTTTTCCTTGTTCTTATATCTA
GATCATGAGACTTGACTGAGGCTGTTTCCTTATCCTCCATCCATCTATGGCGAACTATAGCCAT
GCAGCTGACAACATTTTGCAAAATCTCTCGCCTCTAACAGCCTTTCTGAAACTGACTTCCTTGG
GTTTCATAATAGGAGTCAGTGTGGTGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAGATAA
GACCTTGCATAGAGCTCCTTACTACTTCCTGCTGGATCTGTGCTGCTCAGACATCCTCAGATCT
GCAATTTGTTTTCCATTTGTATTCAACTCTGTCAAAAATGGCTCTACCTGGACTTACGGGACTC
TGACTTGCAAAGTGATTGCCTTTCTGGGGGTTTTGTCCTGTTTCCACACTGCCTTCATGCTCTT
CTGCATCAGCGTCACCAGATACTTAGCCATCGCCCATCACCGCTTCTATACAAAGAGGCTGACC
TTTTGGACGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGTCTGTGGCCATGGCATTTCCCC
CAGTTTTAGATGTAGGCACCTACTCATTCATTAGGGAGGAGGATCAGTGTACCTTCCAACACCG
CTCCTTCAGGGCTAACGATTCCCTAGGATTTATGCTGCTCCTTGCTCTCATCCTCCTAGCCACA
CAGCTTGTCTACCTCAAGCTGATATTTTTTGTCCACGATCGAAGGAAAATGAAGCCAGTCCAGT
TTGTAGCAGCAGTGAGTCAGAACTGGACCTTTCATGGCCCTGGAGCTAGTGGCCAGGCAGCTGC
CAATTGGCTAGCAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAAT
GCGAATACCACAGGCAGAAGACGGCTCTTGGTTTTGGATGAGTTCAAAATGGAGAAAAGAATCA
GCAGAATGTTCTATATAATGACTTTCCTCTTCCTAACCTTGTGGGGTCCCTACCTGGTGGCCTG
CTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTACCAGGGGGATTTCTAACAGCCGCTGTCTGG
ATGAGTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGC
GCTGTTTCAGCACAACCCTTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTGT
TATATGAGGGAGCATCTGTAAATCTTTAGCCTTGTGAGATACTAACCCTCTCTGCTAAGCAATT
GTGGCCTGTAGCCATGTCTTGAGAAGAAAAAAAAAAGAAAACAAGGATGGAATCAGCAGTTGTA
AGGATTTGGTCAACGTTCTGCAGTCTTTGCAATAGTTCACCTATAATCCTGTTTTAAATCTCAG
AGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGT
TTCTTTCTGTGGGTGAACACTAGATAATGAACGTAGCAGGTGCTAAGTATCAGTGCTAAATGCT
GTGTATATCATCACATATGAAAAAAAACTTAAAAAAACAATTAGCATTGGACATTTTAATAAAT
TAAGTTGACATGAGGTAAATGTGTTGATAAAAGCTAATTTTAGAAGTTTGAAGACTTTAAAACA
TTTCATACTATTTTTGTTTTGCAAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTT
AAAAAGATGTGCCATGAATTATTGGGGTACAACACTTTAAACACGCCTTGTGAGTTTGGGGGAA
GCATTCCAAAGCAGTATATTGGTTCCAATTAGAGTTTACCTTTTTTGTATTAATATATTGCTAT
TTCTAAATCCCACTTTCCTTCCCTACCAGTGAAATTGCTAGCATTGAACTGTATTATGTGTTTT
TTGTTAATTCAGTAAAAAAAAAAAAAAGTTTCCAGTTTGTTTCTATTTTACAAATGCTAGATAT
CTGTCCGGGAGGCAACATGAATGGAATCAACTGACCACAGATGAGCAGTTCTAAAAATGCAGAA
TAAACACGTGTTGCCTTAAAGGGTTATCTAGTATCCTTCATCTTCTTTAGCAATGGAGCAAGTA
GTCAAGAGGCATTGAACCAGTAACTGGCCATGGCTGTTCATTGGGAATTCATGGAAGAGCATTC
AATGCTTTCCCCTCTTCCCTCACGTGCTTTGAAAGTTCAAGTACACACCATTAAGATAATGAGA
TTTTCTTCTGAGGTGTGCTACCCATTCTAGTGTGTTCTAAGAAGCAGACAGTTGATATGTGTTT
ATATTGTAAGTCAGCTGTCAGGGGAGCCCACAGCCTTAGTGTGACATCTGGCACAATTTGTGAA
GCATTTATTGTATGGAAGGCACAGTCTTCTTTATACTTTCTGCACATTCAGTGTATTGGTCCTT
TCGATTATTTCAGTTCTAACTTGTGAAAGCTTATAATATGATTTCTGGTATTTTAGAAATACAT
TAGATTCTGTGAGTCTCATTCTTTAAGATACAGATGTGTGAACTTCAATATAAAGTTGCATTTG
CCAAAATTTATCTGTGTAGCCTGTTAATTTTCGTGGAGTAAATTTTACACTTTTGGCATATAAT
TTTCTTTAATCTAGCAGACAAGCACAAACTAGAAAAACTTGCTTTATAATTATTTTTACTTTTG
TAGTTACTATATTCTGAAGCTGGAAATATGTGAATGACAGCATAAAGCTGACAATATTTAAAAG
CATTATTGAGTAGCTCTACAAATCCATCCCTTTATTTATTATTATATGCCAGTAGTATTTACAA
GTGAATACATGTCTAATGGTTTGGTATTTTAATATACTTATTGCATTTTACTGTACAGTAGAAA
TTTTGAGTTCTAAACCTATGACTTGTAAGAAAGGTTTGGAGGATCAGTATTGCAAAGTCAGAGA
AAGTTGCTATTACTTCTGTTGGCTTCCCATAGTTTTGTTTGTTTCTGAAGGGACGTTTGTTTGC
TTTGCTTTTGTATATGAGAAATAAGGAAAAGAACCTAGCAAAACAGGATTTCTCACTGATGCAG
TACTTCTACAAACAGAATTTTAATATGAGTAGGAAAAACAAACAACTGAAAATTTCAATGTCTA
TGCAACTATGAAGTTTTTGCTCAAGCCATTATTAGTGAGCACTCTAACCTCATTTCTACACCAA
AGCTGATTTGATCTGGGACAAAATTTAATGCACAGCAGTGAGGTGGATCTAGCAATAAAAGCTC
ATTGTTGGTACTAAAACCATTACCAAAAACACAATAAAAACAATATTACCAAAACATGGTCTGC
TAACATGTTTCCATCTCAAAATTTGCAGGAAACACATATGACATTGATTATTTTCATGAAGAAC
TTTGCTTAAAGTTTCGACTATCAATCAGAAATTTCAGCTATGATCTTGAGGCCAGGAAACATGG
GCTTCACCAATCCATAATTCCATTATTTAGAGAAGAGAAGAGATGTGGATCTAGGGGTTTGGGG
ATAGGACAGAAGAGAAAGGGAAGCAATTTTGCCTGACTCCACCTCTCTACTTGGACTACAACTC
AATTTGTATAAGTGACTGTTGGGGGTGGAGGGATTAGTGAACACAGCTAACTCTAGTGACTGTC
TCTCTTGAACAATTTAGAGTTTTCAGGTAAAGCCTGAATCAGTGGATCAGACACAGCCTCAGCT
ACAAGTTTTTAAGTCAGTAAATAATCGTAGTAATCATAAAAAAAAATAAGTCTTCCCCAGTGTC
TTTATGACAAAAACACGTTAGCTATTTTGGCAACCATTTCGATAGTCAATAGAAACAGCTGGCA
ATTAATTCAACTTGAAAAGGTTACTAATCTTCAGTCCACAAAAATACATTCTCATTGGGGAGTC
CAACTTCCCATTGAGAGAGACTCCTCATCAATAAATAATGGGTTCTTCTTAGACTAATTACACT
ACAGAGCTTAACGGTCTTCACATTGTTTTTCCATCAGAGTGGTAATGTTTTTCAGTGGATATGC
CTGTGCTCTGCCATCTGGTTCACTTTGTACACAGTAGATTTTTATGCTCGTGGCTGTGGAATCC
CATGCAGATATTAACTAAGGCAGATGGAGGTGAGTAACTTGTCTGGTTTTCTACATAGGCTTGA
ATTAAATAACAAAAATTGATTGTAATTGAAAAACATTCACTGTAAATAGAAAAGTCAATTGACT
GTCTTTCTTACATGCTACCTAACTCAATTTCCATATCATCATTCTCTATAGAATTGATCAATTG
TTAATACTTGGAGATAGACATGTTTCCAATCATCCACATATTTACGGATGCTTATCTGAGTAGG
CTCCTTGTTTACTCATTTGTTCAGTAAATCTGTCCGAGGCTCTGGGCTTCATGCTGTGACTACT
GTGAAAAACATGACAGCCAGAACGAGCTCTCTTTGAGAAAGAATCAACAGACATGGAGTAACAG
TGAGTGGTGGGTGCTAAAACAATAAATCCTCCTAGAGTAGCATCAGAATTGATGAGCACAAATT
CAGTGTTTCCACCTTCTCTCTAATGCCTTATCTCCTGGTTTGCCTTGGAATCTTTTATGTGTCA
TACTTCCTCAACTCTGGGAAATCATTTGCTACTGACTAAGGAAAGTGTCAGGACCCTGCCACTC
AAGCTTAAATGGATCACTGACGCTGTGTTTTGGAAATAGCTCCTATGTTGTTCACGGCTTGTGT
AGAGTCACAGAGAAACATAAATGTGAAGTCGCTCCCCACCCCACTGTGCCCTAGCTGTTTACTT
CCAAAGGACATAATTCCATTCCTTCAGGAGACTTGGAGATGAGTCCTTTCTGCTAAAGTCACCA
TGACAATGTCTCAAGGGACAAAACTTATCCCTGTGCATCATAGTGATTAGCATCAGGGGGCTTT
TCCCCAGTGCCAACCAAAGACAGAAATATGTGAAATGAGGTATATTTCTGTTATTCAAACATTC
TACCCCTGTTTAGATTACTGTTCTTTATTGGAGGTGAAAATATAACTCCTGAGTGCCCTATAGC
TAGACAGTTGCTTTGGACTCCAGCAGTTATTCCCATTGCAAGCACAATGAAATGCATGTGTGCT
TAGGGGGACATGTACCTTCCACGTAGGTCATTTAACTACTTAACTGGGCTGCATCTGTGGAGAC
TACTGGGAAGTGGTACACTGAGCCCAAACTCTTCACTTTTCTGTATTCACCATTAGGCAAATTT
GGGTTTTTATTCTGTCTTATTCCATGAGTAGCCCAGACAATAACTTGTTTACACACACATTTCA
CCTTGTATCAATTTCGTACTGAAAAGGAAAAAGAAAGAGCTAAAATAATAACTGGTGCTTTCAA
ACACCAGCTGACAACACTAAAATCAAAATGTGTAAGTTTTTTATAGTTTTGAAGTCTTGTGAGT
TTGTTTTTCCATGATTAAAAGAAACAAATATATTATGTTTGTATTTGACAATAGACATTTATGA
ATATTTTGAATGGAAATTACAAGTTTTATTATCTGTTCATTAAGGAAAAATTTGTCCTCTTCAA
TTATGGACATGCCATTAATTCTGTGACTTTCTTATACCTTCAAAACTTTTACTTATCTCATGTT
AAAATGATAGAGTTGCTCAAAGCTGAGCAATGACTCCAAAGCCCTCGCGGCGCTTAAAATTAAG
GGAGCCATTTGTAAATGGCCAGTTTAATTTTGCCATAAGTCAAAATAGTCAAGTAAATTAAGAA
TATTCTTTCTTTTAAAGGAGATGCAACATAAGGAGATAGGAAGATTTGGGGTAAACCAGATTGA
CAAAACTTTTGCCTTATGATGCAATGTAACGGATTCCAAAAAAGAATAGTAAAGCCAAAAGCCT
TTAACTTAAAAATAAGTTACATAAATAAAGCCTTGTTTTTAAACAAAGTAAGGAGCTTTTTGCA
TCATCTCCTTTTGCCAATAGGATGTTGTCCATTAGCTGCTAAACCCTTTCAGTTAATAAACTTT
TAAAGTCACTTTCCTCTCCCCAAGTCAGGAAGTTGATAAAGCACCAGATCCTCTAAAGCTCAGA
GAGGAAACCCAGGAGCATGTGTTTCCCTAGAAGAAGCTGTACAAACCGACCTGCAGGAAGCCAC
AGGTCAGTTGGAGGTTCACACCTGACCTCTAGAGCGAGGTCCCACCTCCTTTTGGTGCCTCCGG
ACACATTACCCTCTCAGTGTAGAAGATAATAAATTCTTGACACAAACAGTAATGCTGATATTGT
AATTCAGGGCAAGTTTTATGAGGCTTTGATAGATAGTAAGGTACTGAATCATTTAACTTATGTG
GGCACCCACTATTGATCCCAGGCTGTAGAAGCAAGGTATCTGTTATGCCACAGGCAAGGGATTG
TAATACTAAAGAATGTTATAATTGGAATGAGAACTGAGCTTGAAGTACGCAAAGCTAATCAGTT
GCTTCCTTTTATAGACATAGGGAAATGAAAAAAATTAATAAATGAAGCAGAATTTGTTCTTTTG
TCTTTCATCAAAAA

hide sequence

RefSeq Acc Id:

XM_006236126 ⟹ XP_006236188

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	43,070,194 - 43,075,662 (-)	NCBI
mRatBN7.2	4	42,100,138 - 42,109,584 (-)	NCBI
Rnor_6.0	4	40,377,705 - 40,387,147 (-)	NCBI
Rnor_5.0	4	43,715,383 - 43,721,575 (-)	NCBI

Sequence:

show sequence

TTTTACTGCTGTCTCGAGATCAAATTATTACTGTAGAGAGATTTTTTTTTCTATTTCATTAACA
GATTATTATAAAGCAATAAGCTTGCAGGAAGACAAGCAGACGTTTTACCTTGAGATTTAATGAA
AGCGTGCCTGCTAGCTTTTAAAGGGTGAAGAGTGGGTAGTTGTTTAAAATCTTACCCCACCCTC
GCAAAAACTCTTTGGAAATGGGAGAATCGAGAGGAGGATGATTCTTGAGGCGTTCCTAATCACC
AGGTGTCAGACTATGTGGTGTTTGTGGACTGGTCTAACGTGCCAAATCAAAGATCAGCAGGGAA
AAATCATTTGAGAAGAAATCTACAAGGCGCATCCAATGCTTAGCAGGACCACCCTGACAGAGAA
AGGAAGACGATGTTTCGGGAAGGCAAGGGTTCGGGGCAGCTGGGGTGGAGGCGGCGGTCCGCGG
CACGGTGGCTTCGTGCGCTGCCCTAGGGGAAGAGGATGGGCCTGAGGTCCGGGAAGAGCCTTCC
CGAGCCCACCACTGCCAATGCGGGGAGGGAAAAGTTCCGAAGCTGCCTCGAGGGAACAAAAGCC
TGATTTGGGGCCGGCTGAACTGGACTGGACATTGAAGCAAGCCAGCCTGCTCCGGAGACAGGCA
GGGGGCTCCTGCTGGCTCGGCGGAGGCCGGAGCAACCCTCGCCGCCGCCCTCGCCACCGCGCCG
CCGCCGCCGCGGCCCCTGCGTTACTGGGGGAGACGGTGCCGCTGCGACAGGGGAGGACGCGGCT
GGAGCTGAAGGAGGCTCCAACGCGCAGGCGCCGCCGAGCCCTGCCTGGATGCTCAGTCAAGGCA
CTCAGGAAAAAAAAAATCAGCAATTTATAGAAAGAAGAAGCTATAGTCTGTCGGGATATCCAAC
ACCAACAGATATTCTGATGGCAAATCAAATGGAAGGCAAGAGGAAGCATGACCACAGATTGGAT
CTGAACTCTTTGTGGATTACATTTTCAGTAAAATGTATGGATCTATCTTTTCCTTGTTCTTATA
TCTAGATCATGAGACTTGACTGAGGCTGTTTCCTTATCCTCCATCCATCTATGGCGAACTATAG
CCATGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCTAACAGCCTTTCTGAAACTGACTTCC
TTGGGTTTCATAATAGGAGTCAGTGTGGTGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAG
ATAAGACCTTGCATAGAGCTCCTTACTACTTCCTGCTGGATCTGTGCTGCTCAGACATCCTCAG
ATCTGCAATTTGTTTTCCATTTGTATTCAACTCTGTCAAAAATGGCTCTACCTGGACTTACGGG
ACTCTGACTTGCAAAGTGATTGCCTTTCTGGGGGTTTTGTCCTGTTTCCACACTGCCTTCATGC
TCTTCTGCATCAGCGTCACCAGATACTTAGCCATCGCCCATCACCGCTTCTATACAAAGAGGCT
GACCTTTTGGACGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGTCTGTGGCCATGGCATTT
CCCCCAGTTTTAGATGTAGGCACCTACTCATTCATTAGGGAGGAGGATCAGTGTACCTTCCAAC
ACCGCTCCTTCAGGGCTAACGATTCCCTAGGATTTATGCTGCTCCTTGCTCTCATCCTCCTAGC
CACACAGCTTGTCTACCTCAAGCTGATATTTTTTGTCCACGATCGAAGGAAAATGAAGCCAGTC
CAGTTTGTAGCAGCAGTGAGTCAGAACTGGACCTTTCATGGCCCTGGAGCTAGTGGCCAGGCAG
CTGCCAATTGGCTAGCAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCA
AAATGCGAATACCACAGGCAGAAGACGGCTCTTGGTTTTGGATGAGTTCAAAATGGAGAAAAGA
ATCAGCAGAATGTTCTATATAATGACTTTCCTCTTCCTAACCTTGTGGGGTCCCTACCTGGTGG
CCTGCTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTACCAGGGGGATTTCTAACAGCCGCTGT
CTGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCATTTTCTCCAACAGGGAGCTG
AGGCGCTGTTTCAGCACAACCCTTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAACCTTACT
GTGTTATATGAGGGAGCATCTGTAAATCTTTAGCCTTGTGAGATACTAACCCTCTCTGCTAAGC
AATTGTGGCCTGTAGCCATGTCTTGAGAAGAAAAAAAAAAGAAAACAAGGATGGAATCAGCAGT
TGTAAGGATTTGGTCAACGTTCTGCAGTCTTTGCAATAGTTCACCTATAATCCTGTTTTAAATC
TCAGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCT
AAGTTTCTTTCTGTGGGTGAACACTAGATAATGAACGTAGCAGGTGCTAAGTATCAGTGCTAAA
TGCTGTGTATATCATCACATATGAAAAAAAACTTAAAAAAACAATTAGCATTGGACATTTTAAT
AAATTAAGTTGACATGAGGTAAATGTGTTGATAAAAGCTAATTTTAGAAGTTTGAAGACTTTAA
AACATTTCATACTATTTTTGTTTTGCAAAGACTACACTACTGGGGGACTTAACAGTACTGTAAT
TCTTAAAAAGATGTGCCATGAATTATTGGGGTACAACACTTTAAACACGCCTTGTGAGTTTGGG
GGAAGCATTCCAAAGCAGTATATTGGTTCCAATTAGAGTTTACCTTTTTTGTATTAATATATTG
CTATTTCTAAATCCCACTTTCCTTCCCTACCAGTGAAATTGCTAGCATTGAACTGTATTATGTG
TTTTTTGTTAATTCAGTAAAAAAAAAAAAAAGTTTCCAGTTTGTTTCTATTTTACAAATGCTAG
ATATCTGTCCGGGAGGCAACATGAATGGAATCAACTGACCACAGATGAGCAGTTCTAAAAATGC
AGAATAAACACGTGTTGCCTTAAAGGGTTATCTAGTATCCTTCATCTTCTTTAGCAATGGAGCA
AGTAGTCAAGAGGCATTGAACCAGTAACTGGCCATGGCTGTTCATTGGGAATTCATGGAAGAGC
ATTCAATGCTTTCCCCTCTTCCCTCACGTGCTTTGAAAGTTCAAGTACACACCATTAAGATAAT
GAGATTTTCTTCTGAGGTGTGCTACCCATTCTAGTGTGTTCTAAGAAGCAGACAGTTGATATGT
GTTTATATTGTAAGTCAGCTGTCAGGGGAGCCCACAGCCTTAGTGTGACATCTGGCACAATTTG
TGAAGCATTTATTGTATGGAAGGCACAGTCTTCTTTATACTTTCTGCACATTCAGTGTATTGGT
CCTTTCGATTATTTCAGTTCTAACTTGTGAAAGCTTATAATATGATTTCTGGTATTTTAGAAAT
ACATTAGATTCTGTGAGTCTCATTCTTTAAGATACAGATGTGTGAACTTCAATATAAAGTTGCA
TTTGCCAAAATTTATCTGTGTAGCCTGTTAATTTTCGTGGAGTAAATTTTACACTTTTGGCATA
TAATTTTCTTTAATCTAGCAGACAAGCACAAACTAGAAAAACTTGCTTTATAATTATTTTTACT
TTTGTAGTTACTATATTCTGAAGCTGGAAATATGTGAATGACAGCATAAAGCTGACAATATTTA
AAAGCATTATTGAGTAGCTCTACAAATCCATCCCTTTATTTATTATTATATGCCAGTAGTATTT
ACAAGTGAATACATGTCTAATGGTTTGGTATTTTAATATACTTATTGCATTTTACTGTACAGTA
GAAATTTTGAGTTCTAAACCTATGACTTGTAAGAAAGGTTTGGAGGATCAGTATTGCAAAGTCA
GAGAAAGTTGCTATTACTTCTGTTGGCTTCCCATAGTTTTGTTTGTTTCTGAAGGGACGTTTGT
TTGCTTTGCTTTTGTATATGAGAAATAAGGAAAAGAACCTAGCAAAACAGGATTTCTCACTGAT
GCAGTACTTCTACAAACAGAATTTTAATATGAGTAGGAAAAACAAACAACTGAAAATTTCAATG
TCTATGCAACTATGAAGTTTTTGCTCAAGCCATTATTAGTGAGCACTCTAACCTCATTTCTACA
CCAAAGCTGATTTGATCTGGGACAAAATTTAATGCACAGCAGTGAGGTGGATCTAGCAATAAAA
GCTCATTGTTGGTACTAAAACCATTACCAAAAACACAATAAAAACAATATTACCAAAACATGGT
CTGCTAACATGTTTCCATCTCAAAATTTGCAGGAAACACATATGACATTGATTATTTTCATGAA
GAACTTTGCTTAAAGTTTCGACTATCAATCAGAAATTTCAGCTATGATCTTGAGGCCAGGAAAC
ATGGGCTTCACCAATCCATAATTCCATTATTTAGAGAAGAGAAGAGATGTGGATCTAGGGGTTT
GGGGATAGGACAGAAGAGAAAGGGAAGCAATTTTGCCTGACTCCACCTCTCTACTTGGACTACA
ACTCAATTTGTATAAGTGACTGTTGGGGGTGGAGGGATTAGTGAACACAGCTAACTCTAGTGAC
TGTCTCTCTTGAACAATTTAGAGTTTTCAGGTAAAGCCTGAATCAGTGGATCAGACACAGCCTC
AGCTACAAGTTTTTAAGTCAGTAAATAATCGTAGTAATCATAAAAAAAAATAAGTCTTCCCCAG
TGTCTTTATGACAAAAACACGTTAGCTATTTTGGCAACCATTTCGATAGTCAATAGAAACAGCT
GGCAATTAATTCAACTTGAAAAGGTTACTAATCTTCAGTCCACAAAAATACATTCTCATTGGGG
AGTCCAACTTCCCATTGAGAGAGACTCCTCATCAATAAATAATGGGTTCTTCTTAGACTAATTA
CACTACAGAGCTTAACGGTCTTCACATTGTTTTTCCATCAGAGTGGTAATGTTTTTCAGTGGAT
ATGCCTGTGCTCTGCCATCTGGTTCACTTTGTACACAGTAGATTTTTATGCTCGTGGCTGTGGA
ATCCCATGCAGATATTAACTAAGGCAGATGGAGGTGAGTAACTTGTCTGGTTTTCTACATAGGC
TTGAATTAAATAACAAAAATTGATTGTAATTGAAAAACATTCACTGTAAATAGAAAAGTCAATT
GACTGTCTTTCTTACATGCTACCTAACTCAATTTCCATATCATCATTCTCTATAGAATTGATCA
ATTGTTAATACTTGGAGATAGACATGTTTCCAATCATCCACATATTTACGGATGCTTATCTGAG
TAGGCTCCTTGTTTACTCATTTGTTCAGTAAATCTGTCCGAGGCTCTGGGCTTCATGCTGTGAC
TACTGTGAAAAACATGACAGCCAGAACGAGCTCTCTTTGAGAAAGAATCAACAGACATGGAGTA
ACAGTGAGTGGTGGGTGCTAAAACAATAAATCCTCCTAGAGTAGCATCAGAATTGATGAGCACA
AATTCAGTGTTTCCACCTTCTCTCTAATGCCTTATCTCCTGGTTTGCCTTGGAATCTTTTATGT
GTCATACTTCCTCAACTCTGGGAAATCATTTGCTACTGACTAAGGAAAGTGTCAGGACCCTGCC
ACTCAAGCTTAAATGGATCACTGACGCTGTGTTTTGGAAATAGCTCCTATGTTGTTCACGGCTT
GTGTAGAGTCACAGAGAAACATAAATGTGAAGTCGCTCCCCACCCCACTGTGCCCTAGCTGTTT
ACTTCCAAAGGACATAATTCCATTCCTTCAGGAGACTTGGAGATGAGTCCTTTCTGCTAAAGTC
ACCATGACAATGTCTCAAGGGACAAAACTTATCCCTGTGCATCATAGTGATTAGCATCAGGGGG
CTTTTCCCCAGTGCCAACCAAAGACAGAAATATGTGAAATGAGGTATATTTCTGTTATTCAAAC
ATTCTACCCCTGTTTAGATTACTGTTCTTTATTGGAGGTGAAAATATAACTCCTGAGTGCCCTA
TAGCTAGACAGTTGCTTTGGACTCCAGCAGTTATTCCCATTGCAAGCACAATGAAATGCATGTG
TGCTTAGGGGGACATGTACCTTCCACGTAGGTCATTTAACTACTTAACTGGGCTGCATCTGTGG
AGACTACTGGGAAGTGGTACACTGAGCCCAAACTCTTCACTTTTCTGTATTCACCATTAGGCAA
ATTTGGGTTTTTATTCTGTCTTATTCCATGAGTAGCCCAGACAATAACTTGTTTACACACACAT
TTCACCTTGTATCAATTTCGTACTGAAAAGGAAAAAGAAAGAGCTAAAATAATAACTGGTGCTT
TCAAACACCAGCTGACAACACTAAAATCAAAATGTGTAAGTTTTTTATAGTTTTGAAGTCTTGT
GAGTTTGTTTTTCCATGATTAAAAGAAACAAATATATTATGTTTGTATTTGACAATAGACATTT
ATGAATATTTTGAATGGAAATTACAAGTTTTATTATCTGTTCATTAAGGAAAAATTTGTCCTCT
TCAATTATGGACATGCCATTAATTCTGTGACTTTCTTATACCTTCAAAACTTTTACTTATCTCA
TGTTAAAATGATAGAGTTGCTCAAAGCTGAGCAATGACTCCAAAGCCCTCGCGGCGCTTAAAAT
TAAGGGAGCCATTTGTAAATGGCCAGTTTAATTTTGCCATAAGTCAAAATAGTCAAGTAAATTA
AGAATATTCTTTCTTTTAAAGGAGATGCAACATAAGGAGATAGGAAGATTTGGGGTAAACCAGA
TTGACAAAACTTTTGCCTTATGATGCAATGTAACGGATTCCAAAAAAGAATAGTAAAGCCAAAA
GCCTTTAACTTAAAAATAAGTTACATAAATAAAGCCTTGTTTTTAAACAAAGTAAGGAGCTTTT
TGCATCATCTCCTTTTGCCAATAGGATGTTGTCCATTAGCTGCTAAACCCTTTCAGTTAATAAA
CTTTTAAAGTCACTTTCCTCTCCCCAAGTCAGGAAGTTGATAAAGCACCAGATCCTCTAAAGCT
CAGAGAGGAAACCCAGGAGCATGTGTTTCCCTAGAAGAAGCTGTACAAACCGACCTGCAGGAAG
CCACAGGTCAGTTGGAGGTTCACACCTGACCTCTAGAGCGAGGTCCCACCTCCTTTTGGTGCCT
CCGGACACATTACCCTCTCAGTGTAGAAGATAATAAATTCTTGACACAAACAGTAATGCTGATA
TTGTAATTCAGGGCAAGTTTTATGAGGCTTTGATAGATAGTAAGGTACTGAATCATTTAACTTA
TGTGGGCACCCACTATTGATCCCAGGCTGTAGAAGCAAGGTATCTGTTATGCCACAGGCAAGGG
ATTGTAATACTAAAGAATGTTATAATTGGAATGAGAACTGAGCTTGAAGTACGCAAAGCTAATC
AGTTGCTTCCTTTTATAGACATAGGGAAATGAAAAAAATTAATAAATGAAGCAGAATTTGTTCT
TTTGTCTTTCATCAAAAA

hide sequence

RefSeq Acc Id:

XM_017592860 ⟹ XP_017448349

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	43,070,194 - 43,075,292 (-)	NCBI
mRatBN7.2	4	42,101,160 - 42,109,213 (-)	NCBI
Rnor_6.0	4	40,377,705 - 40,386,811 (-)	NCBI

Sequence:

show sequence

ATAACAAAGGAAGGAAAGGGGGGAACTCATCATACACACCACCGCTTTGACATCAGCAACCTAT
TGGTCATCCCAGCTTGGAAGAGAAAGGAGAGTCTTGTTGCTTTGGGGTGGGATGTGAGGAACAG
CCATGTAAAATCCCTGTACTCCTGATCCGCTAGTCACGTTCGAGAAGCTAACGTGCCAAATCAA
AGATCAGCAGGGAAAAATCATTTGAGAAGAAATCTACAAGGCGCATCCAATGCTTAGCAGGACC
ACCCTGACAGAGAAAGGAAGACGATGTTTCGGGAAGGCAAGGGTTCGGGGCAGCTGGGGTGGAG
GCGGCGGTCCGCGGCACGGTGGCTTCGTGCGCTGCCCTAGGGGAAGAGGATGGGCCTGAGGTCC
GGGAAGAGCCTTCCCGAGCCCACCACTGCCAATGCGGGGAGGGAAAAGTTCCGAAGCTGCCTCG
AGGGAACAAAAGCCTGATTTGGGGCCGGCTGAACTGGACTGGACATTGAAGCAAGCCAGCCTGC
TCCGGAGACAGGCAGGGGGCTCCTGCTGGCTCGGCGGAGGCCGGAGCAACCCTCGCCGCCGCCC
TCGCCACCGCGCCGCCGCCGCCGCGGCCCCTGCGTTACTGGGGGAGACGGTGCCGCTGCGACAG
GGGAGGACGCGGCTGGAGCTGAAGGAGGCTCCAACGCGCAGGCGCCGCCGAGCCCTGCCTGGAT
GCTCAGTCAAGGCACTCAGGAAAAAAAAAATCAGCAATTTATAGAAAGAAGAAGCTATAGTCTG
TCGGGATATCCAACACCAACAGGGGTGGTGGATTTCAGGTTTCGTAATGTTGCATGATGCGATC
GGTATTTACCCGGGGATGTACCGGTTGGGAAATTAACATCATCGGATGCAGTTCTGCCTGGGCT
TCCATCAGCATATTCCAGATATTCTGATGGCAAATCAAATGGAAGGCAAGAGGAAGCATGACCA
CAGATTGGATCTGAACTCTTTGTGGATTACATTTTCAGTAAAATGTATGGATCTATCTTTTCCT
TGTTCTTATATCTAGATCATGAGACTTGACTGAGGCTGTTTCCTTATCCTCCATCCATCTATGG
CGAACTATAGCCATGCAGCTGACAACATTTTGCAAAATCTCTCGCCTCTAACAGCCTTTCTGAA
ACTGACTTCCTTGGGTTTCATAATAGGAGTCAGTGTGGTGGGCAACCTTCTGATCTCCATTTTG
CTAGTGAAAGATAAGACCTTGCATAGAGCTCCTTACTACTTCCTGCTGGATCTGTGCTGCTCAG
ACATCCTCAGATCTGCAATTTGTTTTCCATTTGTATTCAACTCTGTCAAAAATGGCTCTACCTG
GACTTACGGGACTCTGACTTGCAAAGTGATTGCCTTTCTGGGGGTTTTGTCCTGTTTCCACACT
GCCTTCATGCTCTTCTGCATCAGCGTCACCAGATACTTAGCCATCGCCCATCACCGCTTCTATA
CAAAGAGGCTGACCTTTTGGACGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGTCTGTGGC
CATGGCATTTCCCCCAGTTTTAGATGTAGGCACCTACTCATTCATTAGGGAGGAGGATCAGTGT
ACCTTCCAACACCGCTCCTTCAGGGCTAACGATTCCCTAGGATTTATGCTGCTCCTTGCTCTCA
TCCTCCTAGCCACACAGCTTGTCTACCTCAAGCTGATATTTTTTGTCCACGATCGAAGGAAAAT
GAAGCCAGTCCAGTTTGTAGCAGCAGTGAGTCAGAACTGGACCTTTCATGGCCCTGGAGCTAGT
GGCCAGGCAGCTGCCAATTGGCTAGCAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGG
GCATCAGGCAAAATGCGAATACCACAGGCAGAAGACGGCTCTTGGTTTTGGATGAGTTCAAAAT
GGAGAAAAGAATCAGCAGAATGTTCTATATAATGACTTTCCTCTTCCTAACCTTGTGGGGTCCC
TACCTGGTGGCCTGCTATTGGAGAGTTTTTGCAAGAGGGCCTGTAGTACCAGGGGGATTTCTAA
CAGCCGCTGTCTGGATGAGTTTCGCCCAAGCAGGAATCAATCCCTTTGTCTGCATTTTCTCCAA
CAGGGAGCTGAGGCGCTGTTTCAGCACAACCCTTCTTTACTGCAGAAAATCCAGGTTACCAAGG
GAACCTTACTGTGTTATATGAGGGAGCATCTGTAAATCTTTAGCCTTGTGAGATACTAACCCTC
TCTGCTAAGCAATTGTGGCCTGTAGCCATGTCTTGAGAAGAAAAAAAAAAGAAAACAAGGATGG
AATCAGCAGTTGTAAGGATTTGGTCAACGTTCTGCAGTCTTTGCAATAGTTCACCTATAATCCT
GTTTTAAATCTCAGAGTGATCCTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAA
CCACTGCCCTAAGTTTCTTTCTGTGGGTGAACACTAGATAATGAACGTAGCAGGTGCTAAGTAT
CAGTGCTAAATGCTGTGTATATCATCACATATGAAAAAAAACTTAAAAAAACAATTAGCATTGG
ACATTTTAATAAATTAAGTTGACATGAGGTAAATGTGTTGATAAAAGCTAATTTTAGAAGTTTG
AAGACTTTAAAACATTTCATACTATTTTTGTTTTGCAAAGACTACACTACTGGGGGACTTAACA
GTACTGTAATTCTTAAAAAGATGTGCCATGAATTATTGGGGTACAACACTTTAAACACGCCTTG
TGAGTTTGGGGGAAGCATTCCAAAGCAGTATATTGGTTCCAATTAGAGTTTACCTTTTTTGTAT
TAATATATTGCTATTTCTAAATCCCACTTTCCTTCCCTACCAGTGAAATTGCTAGCATTGAACT
GTATTATGTGTTTTTTGTTAATTCAGTAAAAAAAAAAAAAAGTTTCCAGTTTGTTTCTATTTTA
CAAATGCTAGATATCTGTCCGGGAGGCAACATGAATGGAATCAACTGACCACAGATGAGCAGTT
CTAAAAATGCAGAATAAACACGTGTTGCCTTAAAGGGTTATCTAGTATCCTTCATCTTCTTTAG
CAATGGAGCAAGTAGTCAAGAGGCATTGAACCAGTAACTGGCCATGGCTGTTCATTGGGAATTC
ATGGAAGAGCATTCAATGCTTTCCCCTCTTCCCTCACGTGCTTTGAAAGTTCAAGTACACACCA
TTAAGATAATGAGATTTTCTTCTGAGGTGTGCTACCCATTCTAGTGTGTTCTAAGAAGCAGACA
GTTGATATGTGTTTATATTGTAAGTCAGCTGTCAGGGGAGCCCACAGCCTTAGTGTGACATCTG
GCACAATTTGTGAAGCATTTATTGTATGGAAGGCACAGTCTTCTTTATACTTTCTGCACATTCA
GTGTATTGGTCCTTTCGATTATTTCAGTTCTAACTTGTGAAAGCTTATAATATGATTTCTGGTA
TTTTAGAAATACATTAGATTCTGTGAGTCTCATTCTTTAAGATACAGATGTGTGAACTTCAATA
TAAAGTTGCATTTGCCAAAATTTATCTGTGTAGCCTGTTAATTTTCGTGGAGTAAATTTTACAC
TTTTGGCATATAATTTTCTTTAATCTAGCAGACAAGCACAAACTAGAAAAACTTGCTTTATAAT
TATTTTTACTTTTGTAGTTACTATATTCTGAAGCTGGAAATATGTGAATGACAGCATAAAGCTG
ACAATATTTAAAAGCATTATTGAGTAGCTCTACAAATCCATCCCTTTATTTATTATTATATGCC
AGTAGTATTTACAAGTGAATACATGTCTAATGGTTTGGTATTTTAATATACTTATTGCATTTTA
CTGTACAGTAGAAATTTTGAGTTCTAAACCTATGACTTGTAAGAAAGGTTTGGAGGATCAGTAT
TGCAAAGTCAGAGAAAGTTGCTATTACTTCTGTTGGCTTCCCATAGTTTTGTTTGTTTCTGAAG
GGACGTTTGTTTGCTTTGCTTTTGTATATGAGAAATAAGGAAAAGAACCTAGCAAAACAGGATT
TCTCACTGATGCAGTACTTCTACAAACAGAATTTTAATATGAGTAGGAAAAACAAACAACTGAA
AATTTCAATGTCTATGCAACTATGAAGTTTTTGCTCAAGCCATTATTAGTGAGCACTCTAACCT
CATTTCTACACCAAAGCTGATTTGATCTGGGACAAAATTTAATGCACAGCAGTGAGGTGGATCT
AGCAATAAAAGCTCATTGTTGGTACTAAAACCATTACCAAAAACACAATAAAAACAATATTACC
AAAACATGGTCTGCTAACATGTTTCCATCTCAAAATTTGCAGGAAACACATATGACATTGATTA
TTTTCATGAAGAACTTTGCTTAAAGTTTCGACTATCAATCAGAAATTTCAGCTATGATCTTGAG
GCCAGGAAACATGGGCTTCACCAATCCATAATTCCATTATTTAGAGAAGAGAAGAGATGTGGAT
CTAGGGGTTTGGGGATAGGACAGAAGAGAAAGGGAAGCAATTTTGCCTGACTCCACCTCTCTAC
TTGGACTACAACTCAATTTGTATAAGTGACTGTTGGGGGTGGAGGGATTAGTGAACACAGCTAA
CTCTAGTGACTGTCTCTCTTGAACAATTTAGAGTTTTCAGGTAAAGCCTGAATCAGTGGATCAG
ACACAGCCTCAGCTACAAGTTTTTAAGTCAGTAAATAATCGTAGTAATCATAAAAAAAAATAAG
TCTTCCCCAGTGTCTTTATGACAAAAACACGTTAGCTATTTTGGCAACCATTTCGATAGTCAAT
AGAAACAGCTGGCAATTAATTCAACTTGAAAAGGTTACTAATCTTCAGTCCACAAAAATACATT
CTCATTGGGGAGTCCAACTTCCCATTGAGAGAGACTCCTCATCAATAAATAATGGGTTCTTCTT
AGACTAATTACACTACAGAGCTTAACGGTCTTCACATTGTTTTTCCATCAGAGTGGTAATGTTT
TTCAGTGGATATGCCTGTGCTCTGCCATCTGGTTCACTTTGTACACAGTAGATTTTTATGCTCG
TGGCTGTGGAATCCCATGCAGATATTAACTAAGGCAGATGGAGGTGAGTAACTTGTCTGGTTTT
CTACATAGGCTTGAATTAAATAACAAAAATTGATTGTAATTGAAAAACATTCACTGTAAATAGA
AAAGTCAATTGACTGTCTTTCTTACATGCTACCTAACTCAATTTCCATATCATCATTCTCTATA
GAATTGATCAATTGTTAATACTTGGAGATAGACATGTTTCCAATCATCCACATATTTACGGATG
CTTATCTGAGTAGGCTCCTTGTTTACTCATTTGTTCAGTAAATCTGTCCGAGGCTCTGGGCTTC
ATGCTGTGACTACTGTGAAAAACATGACAGCCAGAACGAGCTCTCTTTGAGAAAGAATCAACAG
ACATGGAGTAACAGTGAGTGGTGGGTGCTAAAACAATAAATCCTCCTAGAGTAGCATCAGAATT
GATGAGCACAAATTCAGTGTTTCCACCTTCTCTCTAATGCCTTATCTCCTGGTTTGCCTTGGAA
TCTTTTATGTGTCATACTTCCTCAACTCTGGGAAATCATTTGCTACTGACTAAGGAAAGTGTCA
GGACCCTGCCACTCAAGCTTAAATGGATCACTGACGCTGTGTTTTGGAAATAGCTCCTATGTTG
TTCACGGCTTGTGTAGAGTCACAGAGAAACATAAATGTGAAGTCGCTCCCCACCCCACTGTGCC
CTAGCTGTTTACTTCCAAAGGACATAATTCCATTCCTTCAGGAGACTTGGAGATGAGTCCTTTC
TGCTAAAGTCACCATGACAATGTCTCAAGGGACAAAACTTATCCCTGTGCATCATAGTGATTAG
CATCAGGGGGCTTTTCCCCAGTGCCAACCAAAGACAGAAATATGTGAAATGAGGTATATTTCTG
TTATTCAAACATTCTACCCCTGTTTAGATTACTGTTCTTTATTGGAGGTGAAAATATAACTCCT
GAGTGCCCTATAGCTAGACAGTTGCTTTGGACTCCAGCAGTTATTCCCATTGCAAGCACAATGA
AATGCATGTGTGCTTAGGGGGACATGTACCTTCCACGTAGGTCATTTAACTACTTAACTGGGCT
GCATCTGTGGAGACTACTGGGAAGTGGTACACTGAGCCCAAACTCTTCACTTTTCTGTATTCAC
CATTAGGCAAATTTGGGTTTTTATTCTGTCTTATTCCATGAGTAGCCCAGACAATAACTTGTTT
ACACACACATTTCACCTTGTATCAATTTCGTACTGAAAAGGAAAAAGAAAGAGCTAAAATAATA
ACTGGTGCTTTCAAACACCAGCTGACAACACTAAAATCAAAATGTGTAAGTTTTTTATAGTTTT
GAAGTCTTGTGAGTTTGTTTTTCCATGATTAAAAGAAACAAATATATTATGTTTGTATTTGACA
ATAGACATTTATGAATATTTTGAATGGAAATTACAAGTTTTATTATCTGTTCATTAAGGAAAAA
TTTGTCCTCTTCAATTATGGACATGCCATTAATTCTGTGACTTTCTTATACCTTCAAAACTTTT
ACTTATCTCATGTTAAAATGATAGAGTTGCTCAAAGCTGAGCAATGACTCCAAAGCCCTCGCGG
CGCTTAAAATTAAGGGAGCCATTTGTAAATGGCCAGTTTAATTTTGCCATAAGTCAAAATAGTC
AAGTAAATTAAGAATATTCTTTCTTTTAAAGGAGATGCAACATAAGGAGATAGGAAGATTTGGG
GTAAACCAGATTGACAAAACTTTTGCCTTATGATGCAATGTAACGGATTCCAAAAAAGAATAGT
AAAGCCAAAAGCCTTTAACTTAAAAATAAGTTACATAAATAAAGCCTTGTTTTTAAACAAAGTA
AGGAGCTTTTTGCATCATCTCCTTTTGCCAATAGGATGTTGTCCATTAGCTGCTAAACCCTTTC
AGTTAATAAACTTTTAAAGTCACTTTCCTCTCCCCAAGTCAGGAAGTTGATAAAGCACCAGATC
CTCTAAAGCTCAGAGAGGAAACCCAGGAGCATGTGTTTCCCTAGAAGAAGCTGTACAAACCGAC
CTGCAGGAAGCCACAGGTCAGTTGGAGGTTCACACCTGACCTCTAGAGCGAGGTCCCACCTCCT
TTTGGTGCCTCCGGACACATTACCCTCTCAGTGTAGAAGATAATAAATTCTTGACACAAACAGT
AATGCTGATATTGTAATTCAGGGCAAGTTTTATGAGGCTTTGATAGATAGTAAGGTACTGAATC
ATTTAACTTATGTGGGCACCCACTATTGATCCCAGGCTGTAGAAGCAAGGTATCTGTTATGCCA
CAGGCAAGGGATTGTAATACTAAAGAATGTTATAATTGGAATGAGAACTGAGCTTGAAGTACGC
AAAGCTAATCAGTTGCTTCCTTTTATAGACATAGGGAAATGAAAAAAATTAATAAATGAAGCAG
AATTTGTTCTTTTGTCTTTCATCAAAAA

hide sequence

RefSeq Acc Id:

XM_017592861 ⟹ XP_017448350

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	43,070,194 - 43,075,662 (-)	NCBI
mRatBN7.2	4	42,100,138 - 42,108,157 (-)	NCBI
Rnor_6.0	4	40,377,705 - 40,385,774 (-)	NCBI

Sequence:

show sequence

GGTTAAGTTTGGGGGAGGGGGGTGCACCGTGCTAATGAAACTGCAGGTTCATCAGGATACAGCC
CTCCCTGAGGGTTTTTTTTTTTTTTTGACAATAAACTGCATAATGGAAGTACATTCAGACAATG
CATCTTCTGTAAAGCTTATTGAGAATTCGGTTTCTGGAAACGTTTGCAAATCTGAGGAATATGA
GGCTGCGAATCAAGGAGAACCCTTCCCTTGCAGCACAGAAGCAATCTCTTCCCATCTTCGAATA
TTCTGATGGCAAATCAAATGGAAGGCAAGAGGAAGCATGACCACAGATTGGATCTGAACTCTTT
GTGGATTACATTTTCAGTAAAATGTATGGATCTATCTTTTCCTTGTTCTTATATCTAGATCATG
AGACTTGACTGAGGCTGTTTCCTTATCCTCCATCCATCTATGGCGAACTATAGCCATGCAGCTG
ACAACATTTTGCAAAATCTCTCGCCTCTAACAGCCTTTCTGAAACTGACTTCCTTGGGTTTCAT
AATAGGAGTCAGTGTGGTGGGCAACCTTCTGATCTCCATTTTGCTAGTGAAAGATAAGACCTTG
CATAGAGCTCCTTACTACTTCCTGCTGGATCTGTGCTGCTCAGACATCCTCAGATCTGCAATTT
GTTTTCCATTTGTATTCAACTCTGTCAAAAATGGCTCTACCTGGACTTACGGGACTCTGACTTG
CAAAGTGATTGCCTTTCTGGGGGTTTTGTCCTGTTTCCACACTGCCTTCATGCTCTTCTGCATC
AGCGTCACCAGATACTTAGCCATCGCCCATCACCGCTTCTATACAAAGAGGCTGACCTTTTGGA
CGTGTTTGGCTGTGATCTGCATGGTGTGGACTCTGTCTGTGGCCATGGCATTTCCCCCAGTTTT
AGATGTAGGCACCTACTCATTCATTAGGGAGGAGGATCAGTGTACCTTCCAACACCGCTCCTTC
AGGGCTAACGATTCCCTAGGATTTATGCTGCTCCTTGCTCTCATCCTCCTAGCCACACAGCTTG
TCTACCTCAAGCTGATATTTTTTGTCCACGATCGAAGGAAAATGAAGCCAGTCCAGTTTGTAGC
AGCAGTGAGTCAGAACTGGACCTTTCATGGCCCTGGAGCTAGTGGCCAGGCAGCTGCCAATTGG
CTAGCAGGATTTGGAAGGGGTCCCACACCACCCACCTTGCTGGGCATCAGGCAAAATGCGAATA
CCACAGGCAGAAGACGGCTCTTGGTTTTGGATGAGTTCAAAATGGAGAAAAGAATCAGCAGAAT
GTTCTATATAATGACTTTCCTCTTCCTAACCTTGTGGGGTCCCTACCTGGTGGCCTGCTATTGG
AGAGTTTTTGCAAGAGGGCCTGTAGTACCAGGGGGATTTCTAACAGCCGCTGTCTGGATGAGTT
TCGCCCAAGCAGGAATCAATCCCTTTGTCTGCATTTTCTCCAACAGGGAGCTGAGGCGCTGTTT
CAGCACAACCCTTCTTTACTGCAGAAAATCCAGGTTACCAAGGGAACCTTACTGTGTTATATGA
GGGAGCATCTGTAAATCTTTAGCCTTGTGAGATACTAACCCTCTCTGCTAAGCAATTGTGGCCT
GTAGCCATGTCTTGAGAAGAAAAAAAAAAGAAAACAAGGATGGAATCAGCAGTTGTAAGGATTT
GGTCAACGTTCTGCAGTCTTTGCAATAGTTCACCTATAATCCTGTTTTAAATCTCAGAGTGATC
CTGCTGACTGCTGGCGAAGGTTTGTAATTAAGAAAGGACAGAACCACTGCCCTAAGTTTCTTTC
TGTGGGTGAACACTAGATAATGAACGTAGCAGGTGCTAAGTATCAGTGCTAAATGCTGTGTATA
TCATCACATATGAAAAAAAACTTAAAAAAACAATTAGCATTGGACATTTTAATAAATTAAGTTG
ACATGAGGTAAATGTGTTGATAAAAGCTAATTTTAGAAGTTTGAAGACTTTAAAACATTTCATA
CTATTTTTGTTTTGCAAAGACTACACTACTGGGGGACTTAACAGTACTGTAATTCTTAAAAAGA
TGTGCCATGAATTATTGGGGTACAACACTTTAAACACGCCTTGTGAGTTTGGGGGAAGCATTCC
AAAGCAGTATATTGGTTCCAATTAGAGTTTACCTTTTTTGTATTAATATATTGCTATTTCTAAA
TCCCACTTTCCTTCCCTACCAGTGAAATTGCTAGCATTGAACTGTATTATGTGTTTTTTGTTAA
TTCAGTAAAAAAAAAAAAAAGTTTCCAGTTTGTTTCTATTTTACAAATGCTAGATATCTGTCCG
GGAGGCAACATGAATGGAATCAACTGACCACAGATGAGCAGTTCTAAAAATGCAGAATAAACAC
GTGTTGCCTTAAAGGGTTATCTAGTATCCTTCATCTTCTTTAGCAATGGAGCAAGTAGTCAAGA
GGCATTGAACCAGTAACTGGCCATGGCTGTTCATTGGGAATTCATGGAAGAGCATTCAATGCTT
TCCCCTCTTCCCTCACGTGCTTTGAAAGTTCAAGTACACACCATTAAGATAATGAGATTTTCTT
CTGAGGTGTGCTACCCATTCTAGTGTGTTCTAAGAAGCAGACAGTTGATATGTGTTTATATTGT
AAGTCAGCTGTCAGGGGAGCCCACAGCCTTAGTGTGACATCTGGCACAATTTGTGAAGCATTTA
TTGTATGGAAGGCACAGTCTTCTTTATACTTTCTGCACATTCAGTGTATTGGTCCTTTCGATTA
TTTCAGTTCTAACTTGTGAAAGCTTATAATATGATTTCTGGTATTTTAGAAATACATTAGATTC
TGTGAGTCTCATTCTTTAAGATACAGATGTGTGAACTTCAATATAAAGTTGCATTTGCCAAAAT
TTATCTGTGTAGCCTGTTAATTTTCGTGGAGTAAATTTTACACTTTTGGCATATAATTTTCTTT
AATCTAGCAGACAAGCACAAACTAGAAAAACTTGCTTTATAATTATTTTTACTTTTGTAGTTAC
TATATTCTGAAGCTGGAAATATGTGAATGACAGCATAAAGCTGACAATATTTAAAAGCATTATT
GAGTAGCTCTACAAATCCATCCCTTTATTTATTATTATATGCCAGTAGTATTTACAAGTGAATA
CATGTCTAATGGTTTGGTATTTTAATATACTTATTGCATTTTACTGTACAGTAGAAATTTTGAG
TTCTAAACCTATGACTTGTAAGAAAGGTTTGGAGGATCAGTATTGCAAAGTCAGAGAAAGTTGC
TATTACTTCTGTTGGCTTCCCATAGTTTTGTTTGTTTCTGAAGGGACGTTTGTTTGCTTTGCTT
TTGTATATGAGAAATAAGGAAAAGAACCTAGCAAAACAGGATTTCTCACTGATGCAGTACTTCT
ACAAACAGAATTTTAATATGAGTAGGAAAAACAAACAACTGAAAATTTCAATGTCTATGCAACT
ATGAAGTTTTTGCTCAAGCCATTATTAGTGAGCACTCTAACCTCATTTCTACACCAAAGCTGAT
TTGATCTGGGACAAAATTTAATGCACAGCAGTGAGGTGGATCTAGCAATAAAAGCTCATTGTTG
GTACTAAAACCATTACCAAAAACACAATAAAAACAATATTACCAAAACATGGTCTGCTAACATG
TTTCCATCTCAAAATTTGCAGGAAACACATATGACATTGATTATTTTCATGAAGAACTTTGCTT
AAAGTTTCGACTATCAATCAGAAATTTCAGCTATGATCTTGAGGCCAGGAAACATGGGCTTCAC
CAATCCATAATTCCATTATTTAGAGAAGAGAAGAGATGTGGATCTAGGGGTTTGGGGATAGGAC
AGAAGAGAAAGGGAAGCAATTTTGCCTGACTCCACCTCTCTACTTGGACTACAACTCAATTTGT
ATAAGTGACTGTTGGGGGTGGAGGGATTAGTGAACACAGCTAACTCTAGTGACTGTCTCTCTTG
AACAATTTAGAGTTTTCAGGTAAAGCCTGAATCAGTGGATCAGACACAGCCTCAGCTACAAGTT
TTTAAGTCAGTAAATAATCGTAGTAATCATAAAAAAAAATAAGTCTTCCCCAGTGTCTTTATGA
CAAAAACACGTTAGCTATTTTGGCAACCATTTCGATAGTCAATAGAAACAGCTGGCAATTAATT
CAACTTGAAAAGGTTACTAATCTTCAGTCCACAAAAATACATTCTCATTGGGGAGTCCAACTTC
CCATTGAGAGAGACTCCTCATCAATAAATAATGGGTTCTTCTTAGACTAATTACACTACAGAGC
TTAACGGTCTTCACATTGTTTTTCCATCAGAGTGGTAATGTTTTTCAGTGGATATGCCTGTGCT
CTGCCATCTGGTTCACTTTGTACACAGTAGATTTTTATGCTCGTGGCTGTGGAATCCCATGCAG
ATATTAACTAAGGCAGATGGAGGTGAGTAACTTGTCTGGTTTTCTACATAGGCTTGAATTAAAT
AACAAAAATTGATTGTAATTGAAAAACATTCACTGTAAATAGAAAAGTCAATTGACTGTCTTTC
TTACATGCTACCTAACTCAATTTCCATATCATCATTCTCTATAGAATTGATCAATTGTTAATAC
TTGGAGATAGACATGTTTCCAATCATCCACATATTTACGGATGCTTATCTGAGTAGGCTCCTTG
TTTACTCATTTGTTCAGTAAATCTGTCCGAGGCTCTGGGCTTCATGCTGTGACTACTGTGAAAA
ACATGACAGCCAGAACGAGCTCTCTTTGAGAAAGAATCAACAGACATGGAGTAACAGTGAGTGG
TGGGTGCTAAAACAATAAATCCTCCTAGAGTAGCATCAGAATTGATGAGCACAAATTCAGTGTT
TCCACCTTCTCTCTAATGCCTTATCTCCTGGTTTGCCTTGGAATCTTTTATGTGTCATACTTCC
TCAACTCTGGGAAATCATTTGCTACTGACTAAGGAAAGTGTCAGGACCCTGCCACTCAAGCTTA
AATGGATCACTGACGCTGTGTTTTGGAAATAGCTCCTATGTTGTTCACGGCTTGTGTAGAGTCA
CAGAGAAACATAAATGTGAAGTCGCTCCCCACCCCACTGTGCCCTAGCTGTTTACTTCCAAAGG
ACATAATTCCATTCCTTCAGGAGACTTGGAGATGAGTCCTTTCTGCTAAAGTCACCATGACAAT
GTCTCAAGGGACAAAACTTATCCCTGTGCATCATAGTGATTAGCATCAGGGGGCTTTTCCCCAG
TGCCAACCAAAGACAGAAATATGTGAAATGAGGTATATTTCTGTTATTCAAACATTCTACCCCT
GTTTAGATTACTGTTCTTTATTGGAGGTGAAAATATAACTCCTGAGTGCCCTATAGCTAGACAG
TTGCTTTGGACTCCAGCAGTTATTCCCATTGCAAGCACAATGAAATGCATGTGTGCTTAGGGGG
ACATGTACCTTCCACGTAGGTCATTTAACTACTTAACTGGGCTGCATCTGTGGAGACTACTGGG
AAGTGGTACACTGAGCCCAAACTCTTCACTTTTCTGTATTCACCATTAGGCAAATTTGGGTTTT
TATTCTGTCTTATTCCATGAGTAGCCCAGACAATAACTTGTTTACACACACATTTCACCTTGTA
TCAATTTCGTACTGAAAAGGAAAAAGAAAGAGCTAAAATAATAACTGGTGCTTTCAAACACCAG
CTGACAACACTAAAATCAAAATGTGTAAGTTTTTTATAGTTTTGAAGTCTTGTGAGTTTGTTTT
TCCATGATTAAAAGAAACAAATATATTATGTTTGTATTTGACAATAGACATTTATGAATATTTT
GAATGGAAATTACAAGTTTTATTATCTGTTCATTAAGGAAAAATTTGTCCTCTTCAATTATGGA
CATGCCATTAATTCTGTGACTTTCTTATACCTTCAAAACTTTTACTTATCTCATGTTAAAATGA
TAGAGTTGCTCAAAGCTGAGCAATGACTCCAAAGCCCTCGCGGCGCTTAAAATTAAGGGAGCCA
TTTGTAAATGGCCAGTTTAATTTTGCCATAAGTCAAAATAGTCAAGTAAATTAAGAATATTCTT
TCTTTTAAAGGAGATGCAACATAAGGAGATAGGAAGATTTGGGGTAAACCAGATTGACAAAACT
TTTGCCTTATGATGCAATGTAACGGATTCCAAAAAAGAATAGTAAAGCCAAAAGCCTTTAACTT
AAAAATAAGTTACATAAATAAAGCCTTGTTTTTAAACAAAGTAAGGAGCTTTTTGCATCATCTC
CTTTTGCCAATAGGATGTTGTCCATTAGCTGCTAAACCCTTTCAGTTAATAAACTTTTAAAGTC
ACTTTCCTCTCCCCAAGTCAGGAAGTTGATAAAGCACCAGATCCTCTAAAGCTCAGAGAGGAAA
CCCAGGAGCATGTGTTTCCCTAGAAGAAGCTGTACAAACCGACCTGCAGGAAGCCACAGGTCAG
TTGGAGGTTCACACCTGACCTCTAGAGCGAGGTCCCACCTCCTTTTGGTGCCTCCGGACACATT
ACCCTCTCAGTGTAGAAGATAATAAATTCTTGACACAAACAGTAATGCTGATATTGTAATTCAG
GGCAAGTTTTATGAGGCTTTGATAGATAGTAAGGTACTGAATCATTTAACTTATGTGGGCACCC
ACTATTGATCCCAGGCTGTAGAAGCAAGGTATCTGTTATGCCACAGGCAAGGGATTGTAATACT
AAAGAATGTTATAATTGGAATGAGAACTGAGCTTGAAGTACGCAAAGCTAATCAGTTGCTTCCT
TTTATAGACATAGGGAAATGAAAAAAATTAATAAATGAAGCAGAATTTGTTCTTTTGTCTTTCA
TCAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_071590	(Get FASTA)	NCBI Sequence Viewer
	XP_006236186	(Get FASTA)	NCBI Sequence Viewer
	XP_006236188	(Get FASTA)	NCBI Sequence Viewer
	XP_017448349	(Get FASTA)	NCBI Sequence Viewer
	XP_017448350	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG42284	(Get FASTA)	NCBI Sequence Viewer
	AAH87727	(Get FASTA)	NCBI Sequence Viewer
	BAA96649	(Get FASTA)	NCBI Sequence Viewer
	EDM15091	(Get FASTA)	NCBI Sequence Viewer
	EDM15092	(Get FASTA)	NCBI Sequence Viewer
	EDM15093	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000031780
	ENSRNOP00000031780.3
	ENSRNOP00000084618.1
	ENSRNOP00000098842
	ENSRNOP00000111229
	ENSRNOP00000112202
GenBank Protein	P60895	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_071590 ⟸ NM_022254

- UniProtKB:

P60895 (UniProtKB/Swiss-Prot), A6IE06 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCC
SDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRF
YTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLA
LILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTL
LGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGF
LTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI

hide sequence

RefSeq Acc Id:	XP_006236188 ⟸ XM_006236126
- Peptide Label:	isoform X1
- UniProtKB:	P60895 (UniProtKB/Swiss-Prot), A6IE06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCC SDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRF YTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLA LILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTL LGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGF LTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI hide sequence

RefSeq Acc Id:	XP_006236186 ⟸ XM_006236124
- Peptide Label:	isoform X1
- UniProtKB:	P60895 (UniProtKB/Swiss-Prot), A6IE06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCC SDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRF YTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLA LILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTL LGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGF LTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI hide sequence

RefSeq Acc Id:	XP_017448349 ⟸ XM_017592860
- Peptide Label:	isoform X1
- UniProtKB:	P60895 (UniProtKB/Swiss-Prot), A6IE06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCC SDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRF YTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLA LILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTL LGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGF LTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI hide sequence

RefSeq Acc Id:	XP_017448350 ⟸ XM_017592861
- Peptide Label:	isoform X1
- UniProtKB:	P60895 (UniProtKB/Swiss-Prot), A6IE06 (UniProtKB/TrEMBL)
- Sequence:	show sequence MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCC SDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRF YTKRLTFWTCLAVICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLA LILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGFGRGPTPPTL LGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLTLWGPYLVACYWRVFARGPVVPGGF LTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI hide sequence

Ensembl Acc Id:

ENSRNOP00000031780 ⟸ ENSRNOT00000039005

Ensembl Acc Id:

ENSRNOP00000084618 ⟸ ENSRNOT00000100667

Ensembl Acc Id:

ENSRNOP00000098842 ⟸ ENSRNOT00000142999

Ensembl Acc Id:

ENSRNOP00000111229 ⟸ ENSRNOT00000149013

Ensembl Acc Id:

ENSRNOP00000102995 ⟸ ENSRNOT00000123242

Ensembl Acc Id:

ENSRNOP00000112202 ⟸ ENSRNOT00000167546

Protein Domains

G-protein coupled receptors family 1 profile

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P60895-F1-model_v2	AlphaFold	P60895	1-370	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:71011	AgrOrtholog
BioCyc Gene	G2FUF-45604	BioCyc
Ensembl Genes	ENSRNOG00000024636	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000039005	ENTREZGENE
	ENSRNOT00000039005.6	UniProtKB/Swiss-Prot
	ENSRNOT00000100667.1	UniProtKB/Swiss-Prot
	ENSRNOT00000142999	ENTREZGENE
	ENSRNOT00000149013	ENTREZGENE
	ENSRNOT00000167546	ENTREZGENE
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7320496	IMAGE-MGC_LOAD
InterPro	GPCR_Orphan/Phoenixin	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot
KEGG Report	rno:64020	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:105281	IMAGE-MGC_LOAD
NCBI Gene	64020	ENTREZGENE
PANTHER	G PROTEIN-COUPLED RECEPTOR	UniProtKB/Swiss-Prot
	G-PROTEIN COUPLED RECEPTOR 85-RELATED	UniProtKB/Swiss-Prot
Pfam	7tm_1	UniProtKB/Swiss-Prot
PhenoGen	Gpr85	PhenoGen
PRINTS	GPCRRHODOPSN	UniProtKB/Swiss-Prot
PROSITE	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000024636	RatGTEx
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/Swiss-Prot
UniProt	A6IE06	ENTREZGENE, UniProtKB/TrEMBL
	GPR85_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	Q9JHI6	UniProtKB/Swiss-Prot
	Q9NPD1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2002-07-09	Gpr85	G protein-coupled receptor 85			Symbol and Name updated to reflect Human and Mouse nomenclature	70877	APPROVED

RGD Curation Notes

Note Type	Note	Reference

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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