Cnksr2 (connector enhancer of kinase suppressor of Ras 2)

Gene: Cnksr2 (connector enhancer of kinase suppressor of Ras 2) Rattus norvegicus

Analyze

Symbol:

Cnksr2

Name:

connector enhancer of kinase suppressor of Ras 2

RGD ID:

708454

Description:

Enables identical protein binding activity. Involved in postsynapse organization. Located in neuronal cell body and postsynaptic membrane. Is active in glutamatergic synapse. Is extrinsic component of postsynaptic density membrane. Human ortholog(s) of this gene implicated in syndromic X-linked mental retardation Hough type. Orthologous to human CNKSR2 (connector enhancer of kinase suppressor of Ras 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3,3',4,4',5-pentachlorobiphenyl.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CNK homolog protein 2; CNK2; connector enhancer of KSR 2; LOC59322; maguin; maguin-1; maguin-2; membrane-associated guanylate kinase-interacting protein

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	40,722,843 - 40,971,730 (+)	NCBI		GRCr8
mRatBN7.2	X	36,908,135 - 37,148,337 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	36,907,850 - 37,150,555 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	38,074,046 - 38,335,201 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	41,541,236 - 41,802,393 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	39,225,951 - 39,487,110 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	39,711,001 - 39,953,860 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	39,711,201 - 39,951,847 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	40,021,056 - 40,261,531 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	58,198,352 - 58,440,335 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	58,251,535 - 58,484,403 (+)	NCBI
Celera	X	37,542,061 - 37,781,985 (+)	NCBI		Celera
Cytogenetic Map	X	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorders (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

syndromic X-linked mental retardation Hough type (ISO)

type 2 diabetes mellitus (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-catechin (ISO)

(-)-demecolcine (ISO)

(-)-epigallocatechin 3-gallate (ISO)

1,2-dichloroethane (ISO)

17beta-hydroxy-5alpha-androstan-3-one (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,3',4,4',5-pentachlorobiphenyl (EXP)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

belinostat (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

cocaine (ISO)

copper atom (ISO)

copper(0) (ISO)

Cuprizon (EXP)

diazinon (ISO)

dorsomorphin (ISO)

entinostat (ISO)

epoxiconazole (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fluoxetine (EXP)

folic acid (ISO)

formaldehyde (ISO)

FR900359 (ISO)

genistein (ISO)

gentamycin (EXP)

hydroquinone O-beta-D-glucopyranoside (ISO)

kojic acid (ISO)

mercury dibromide (ISO)

methotrexate (ISO)

methylmercury chloride (ISO)

N-Nitrosopyrrolidine (ISO)

nickel atom (ISO)

O-methyleugenol (ISO)

p-chloromercuribenzoic acid (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

perfluorononanoic acid (ISO)

permethrin (ISO)

phenylmercury acetate (ISO)

potassium chromate (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

triclosan (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vincristine (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular signal transduction (ISO)

postsynapse organization (IDA,IMP)

postsynaptic specialization organization (IDA,IMP,ISO)

regulation of signal transduction (IEA)

synapse organization (IEA)

Cellular Component

cytoplasm (IEA)

extrinsic component of postsynaptic density membrane (IDA,IEP,IMP)

glutamatergic synapse (IDA,IEP,IMP,ISO)

membrane (IEA)

neuronal cell body (IDA)

plasma membrane (ISO)

postsynaptic density (ISO)

postsynaptic membrane (IDA)

Molecular Function

identical protein binding (IPI)

protein binding (IPI,ISO)

protein kinase binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Synaptic localization of membrane-associated guanylate kinase-interacting protein mediated by the pleckstrin homology domain.	Iida J, etal., Eur J Neurosci 2002 May;15(9):1493-8.
2.	The CNK2 scaffold interacts with vilse and modulates Rac cycling during spine morphogenesis in hippocampal neurons.	Lim J, etal., Curr Biol. 2014 Mar 31;24(7):786-92. doi: 10.1016/j.cub.2014.02.036. Epub 2014 Mar 20.
3.	Densin-180, a synaptic protein, links to PSD-95 through its direct interaction with MAGUIN-1.	Ohtakara K, etal., Genes Cells. 2002 Nov;7(11):1149-60.
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	MAGUIN, a novel neuronal membrane-associated guanylate kinase-interacting protein.	Yao I, etal., J Biol Chem 1999 Apr 23;274(17):11889-96.
7.	Disease-associated synaptic scaffold protein CNK2 modulates PSD size and influences localisation of the regulatory kinase TNIK.	Zieger HL, etal., Sci Rep. 2020 Mar 31;10(1):5709. doi: 10.1038/s41598-020-62207-4.

Additional References at PubMed

PMID:14597674	PMID:17114649	PMID:19056867	PMID:22871113	PMID:29476059	PMID:30053369

Genomics

Comparative Map Data

Cnksr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	40,722,843 - 40,971,730 (+)	NCBI		GRCr8
mRatBN7.2	X	36,908,135 - 37,148,337 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	36,907,850 - 37,150,555 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	38,074,046 - 38,335,201 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	41,541,236 - 41,802,393 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	39,225,951 - 39,487,110 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	39,711,001 - 39,953,860 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	39,711,201 - 39,951,847 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	40,021,056 - 40,261,531 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	58,198,352 - 58,440,335 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	58,251,535 - 58,484,403 (+)	NCBI
Celera	X	37,542,061 - 37,781,985 (+)	NCBI		Celera
Cytogenetic Map	X	q21	NCBI

CNKSR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	21,374,418 - 21,654,689 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	21,372,801 - 21,654,695 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	21,392,536 - 21,672,807 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	21,302,901 - 21,580,700 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	21,152,636 - 21,430,436	NCBI
Celera	X	25,513,670 - 25,793,712 (+)	NCBI		Celera
Cytogenetic Map	X	p22.12	NCBI
HuRef	X	19,116,680 - 19,415,186 (+)	NCBI		HuRef
CHM1_1	X	21,422,963 - 21,703,230 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	20,957,756 - 21,238,011 (+)	NCBI		T2T-CHM13v2.0

Cnksr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	156,604,426 - 156,827,454 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	156,604,432 - 156,826,290 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	157,821,430 - 158,044,458 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	157,821,436 - 158,043,294 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	154,259,505 - 154,481,042 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	153,165,678 - 153,387,215 (-)	NCBI		MGSCv36	mm8
Celera	X	141,071,875 - 141,293,833 (-)	NCBI		Celera
Cytogenetic Map	X	F4	NCBI
cM Map	X	72.76	NCBI

Cnksr2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955509	1,758,803 - 1,985,511 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955509	1,758,803 - 1,977,776 (+)	NCBI	ChiLan1.0	ChiLan1.0

CNKSR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	23,182,168 - 23,462,965 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	23,185,640 - 23,466,355 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	14,004,393 - 14,285,027 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	21,360,089 - 21,640,819 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	21,360,095 - 21,640,819 (+)	Ensembl	panpan1.1		panPan2

CNKSR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	17,187,742 - 17,464,526 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	17,187,742 - 17,463,102 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
ROS_Cfam_1.0	X	17,146,603 - 17,424,099 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	17,146,103 - 17,424,094 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	17,181,511 - 17,458,370 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	17,203,159 - 17,480,091 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	17,263,244 - 17,539,996 (+)	NCBI		UU_Cfam_GSD_1.0

Cnksr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	10,168,415 - 10,430,695 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936624	2,727,208 - 2,989,659 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936624	2,727,208 - 2,989,653 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CNKSR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	17,561,260 - 17,838,493 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	17,561,114 - 17,838,034 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	18,898,868 - 19,131,561 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CNKSR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	19,837,495 - 20,119,396 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	19,891,949 - 20,117,574 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666056	21,694,514 - 21,984,321 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cnksr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624829	6,286,259 - 6,556,757 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624829	6,286,716 - 6,556,757 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Cnksr2
699 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	117
Count of miRNA genes:	99
Interacting mature miRNAs:	107
Transcripts:	ENSRNOT00000009802
Prediction methods:	Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1	43491017	Rat
1298071	Edpm12	Estrogen-dependent pituitary mass QTL 12	3.2		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	X	2927898	47927898	Rat
10755455	Coatc13	Coat color QTL 13		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	4406000	49406000	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	4494549	49494549	Rat
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	14843113	120568734	Rat
71116	Niddm16	Non-insulin dependent diabetes mellitus QTL 16	7.81		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	15297802	60297802	Rat
1598873	Memor2	Memory QTL 2	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	X	20990947	41052531	Rat
2290375	Gluco34	Glucose level QTL 34	2.75		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	20990947	41203591	Rat

Markers in Region

RH140438

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	37,138,957 - 37,139,116 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	39,942,271 - 39,942,429	NCBI	Rnor6.0
Rnor_5.0	X	40,252,153 - 40,252,311	UniSTS	Rnor5.0
RGSC_v3.4	X	58,430,956 - 58,431,114	UniSTS	RGSC3.4
Celera	X	37,772,606 - 37,772,764	UniSTS
RH 3.4 Map	X	526.1	UniSTS
Cytogenetic Map	X	q21	UniSTS

CNKSR2_4601

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	37,148,146 - 37,148,675 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	39,951,459 - 39,951,987	NCBI	Rnor6.0
Rnor_5.0	X	40,261,341 - 40,261,869	UniSTS	Rnor5.0
RGSC_v3.4	X	58,440,145 - 58,440,673	UniSTS	RGSC3.4
Celera	X	37,781,795 - 37,782,323	UniSTS
Cytogenetic Map	X	q21	UniSTS

RH15676

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	37,138,758 - 37,138,948 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	39,942,072 - 39,942,261	NCBI	Rnor6.0
Rnor_5.0	X	40,251,954 - 40,252,143	UniSTS	Rnor5.0
RGSC_v3.4	X	58,430,757 - 58,430,946	UniSTS	RGSC3.4
Celera	X	37,772,407 - 37,772,596	UniSTS
Cytogenetic Map	X	q21	UniSTS

UniSTS:224320

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	37,137,655 - 37,137,816 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	39,940,969 - 39,941,129	NCBI	Rnor6.0
Rnor_5.0	X	40,250,851 - 40,251,011	UniSTS	Rnor5.0
RGSC_v3.4	X	58,429,654 - 58,429,814	UniSTS	RGSC3.4
Celera	X	37,771,304 - 37,771,464	UniSTS
Cytogenetic Map	X	q21	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									56		1
Low		10	16	6	2	6	8	8	18	17	35	11	8
Below cutoff	3	33	12	6	15	6		3		17	5

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001113366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_021686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF102853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF102854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000009802 ⟹ ENSRNOP00000009802

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	36,907,850 - 37,150,555 (+)	Ensembl
Rnor_6.0 Ensembl	X	39,711,255 - 39,951,847 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000080512 ⟹ ENSRNOP00000071915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	36,908,135 - 37,139,231 (+)	Ensembl
Rnor_6.0 Ensembl	X	39,711,201 - 39,942,544 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000095688 ⟹ ENSRNOP00000084300

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	36,907,850 - 37,150,555 (+)	Ensembl

RefSeq Acc Id:

NM_001113366 ⟹ NP_001106837

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,723,218 - 40,963,405 (+)	NCBI
mRatBN7.2	X	36,908,135 - 37,148,337 (+)	NCBI
Rnor_6.0	X	39,711,201 - 39,951,649 (+)	NCBI
Rnor_5.0	X	40,021,056 - 40,261,531 (+)	NCBI
RGSC_v3.4	X	58,198,352 - 58,440,335 (+)	RGD
Celera	X	37,542,061 - 37,781,985 (+)	RGD

Sequence:

show sequence

GCGGCCGCCTCCGACGCTCCAGCCTCCGGACGGACACACAAAAGCCACCCTCTCCCTGTCGCCC
ACCCCAGGAGGCTGCGGCCGGCCACTGACCCCACCTGAGGGCGCAGCGGGCTGCGGACTTGGCT
TTCTGTCCGAGCTCCGCGTCCCACGCGGCACCAACCCCGCCGCCCATGGCTCTGATAATGGAAC
CAGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTCGATGACTGCTTACA
GCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAGTGGAGACCAGCTGCTACGCATTACACAT
CAGGAGCTAGAAGATCTGGGAGTCAGCCGTATTGGCCATCAGGAGCTGATCTTGGAGGCAGTCG
ACCTTCTGTGTGCACTGAATTATGGCTTAGAAACAGAAAATCTAAAAACCCTTTCTCACAAGTT
GAATGCGTCTGCCAAAAATCTACAGAACTTCATAACAGGAAGGAGGAGGAGCGGCCATTATGAT
GGGAGGACCAGCCGAAAATTACCAAATGACTTTTTGACCTCAGTTGTGGATCTGATTGGAGCAG
CCAAGAGTCTTCTTGCTTGGTTGGACAGGTCACCATTTGCTGCTGTGACAGACTATTCAGTCAC
AAGAAATAATGTCATACAACTCTGCTTGGAGTTAACAACAATTGTGCAACAGGATTGCACTGTC
TATGAAACTGAAAATAAAATTCTTCATGTGTGTAAAACTCTTTCTGGGGTCTGTGACCACATCA
TATCCCTGTCGTCAGATCCTCTGGTTTCACAGTCTGCTCACCTTGAAGTGATTCAGCTGGCAAA
TATCAAACCAAGTGAAGGGCTGGGTATGTATATTAAATCCACATATGATGGCCTCCATGTAATT
ACGGGAACCACAGAAAATTCACCTGCAGATCGGTGCAAGAAAATCCACGCTGGGGATGAAGTGA
TTCAAGTCAATCATCAGACTGTGGTGGGGTGGCAGTTGAAAAATTTGGTGAATGCACTACGAGA
GGACCCGAGTGGTGTTATCTTAACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTCAGCACCA
GCTTTACTGAAAAATATGAGATGGAAGCCCCTTGCTCTGCAGCCTCTTATACCTAGAAGTCCCA
CAAGCAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTCTGCTCT
CCAGGATCTCTACATCCCCCCTCCTCCTGCAGAACCATACATTCCCAGGGACGAAAAAGGAAAC
CTTCCTTGTGAAGATCTCAGAGGACATATGGTGGGCAAGCCAGTTCATAAGGGATCTGAATCCC
CCAATTCATTTCTGGACCAGGAATATCGAAAGAGGTTTAACATTGTTGAAGAAGACACTGTCTT
ATATTGCTATGAATATGAAAAAGGACGATCAAGTAGTCAAGGAAGACGAGAAAGCACACCAACC
TATGGCAAGCTACGACCTATATCTATGCCAGTCGAATATAATTGGGTGGGGGACTATGAAGATC
CAAATAAGATGAAGAGAGATAGTAGAAGAGAAAACTCTCTACTTCGATACATGAGCAATGAAAA
AATTGCTCAAGAAGAATACATGTTTCAGAGAAACAGCAAAAAGGACACAGGGAAGAAGTCAAAA
AAGAAGGGTGATAAGAGTACTAGCCCAACTCACTACTCCTTGCTGCCTAGTTTGCAAATGGATG
CATTGAGACAAGACATCATGGGCACACCAGTGCCAGAAACCACACTGTACCATACATTTCAGCA
GTCCTCTCTGCAGCACAAATCAAAGAAGAAAAACAAAGGAGCTATAGCAGGCAAGAGCAAAAGA
AGAATTTCTTGCAAGGATCTTGGCCGTGGTGACTGTGAAGGATGGCTTTGGAAAAAGAAAGATG
CAAAGAGCTATTTTTCACAGAAATGGAAGAAGTACTGGTTTGTCCTAAAGGATGCATCCTTGTA
CTGGTATATTAATGAAGAGGATGAAAAAGCAGAGGGATTCATCAGTCTGCCTGAATTTAAAATC
GATAGAGCCAGTGAATGCCGCAAGAAATATGCATTCAAGGCCTGCCATCCTAAAATCAAAAGCT
TTTATTTCGCTGCTGAGCATCTCGATGACATGAACAGGTGGCTTAATAGAATTAACATGCTGAC
TGCAGGATATGCCGAAAGAGAGAGGATTAAACAAGAACAAGATTACTGGAGTGAGAGTGACAAA
GAAGAAGCAGATACTCCATCAACACCAAAACAAGACAGCCCTCCACCCCCATATGACACATACC
CACGGCCTCCCTCTATGAGTTGTGCCAGTCCTTATGTGGAAGCAAAACACAGCCGGCTTTCCTC
CACAGAGACCTCTCAGTCTCAGTCTTCACATGAGGAATTTCGACAGGAAGTTACTGGGAGCAGT
GCTGTGTCCCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATCGAGACGC
CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCTCTGGAAGATTCTGTCTTCTCTGA
CTCGGCAGCCATCTCCCCTGAGCACAGGCGGCAGTCCACTCTTCCAACTCAGAAGTGCCACCTC
CAGGATCATTATGGCCCATACCCTTTAGCTGAGAGCGAGAGGATGCAAGTGTTGAATGGCAATG
GGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAACGC
ACCAGTTAGTGCCTGCGATCCACAAGATGACATACAGCCACCAGAGGTGGAGGAAGAAGAGGAG
GAGGAGGAAGAGGAGGCAGCAGGAGAAAACATAGGCGAGAAAAATGAAAATAGGGAAGAAAAGT
TAGGAGACTCCTTGCAAGATTTATACAGGGCACTGGAGGAAGCCAGTCTGTCACCACTAGGAGA
ACATCGCATTTCAACCAAGATCGAATACAAACTATCGTTCATAAAACGATGCAATGATCCTGTG
ATGAATGAGAAGCTGCACAGGCTGAGAATTCTTAAAAGCACTTTAAAGGCCAGAGAAGGGGAAG
TAGCCATTATTGATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATTCCAACAATGGAA
GCAGATGTACCTCGACCTTTTCTTGGATATCTGTCAAAACACCACCTCAAATGACCCACTAAGT
ATTTCTTCTGAAGTAGATGTTATCACTTCCTCTCTAACACATACTCATTCGTACATTGAGACAC
ACGTGTAA

hide sequence

RefSeq Acc Id:

NM_021686 ⟹ NP_067718

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,723,218 - 40,954,299 (+)	NCBI
mRatBN7.2	X	36,908,135 - 37,139,231 (+)	NCBI
Rnor_6.0	X	39,711,201 - 39,942,544 (+)	NCBI
Rnor_5.0	X	40,021,056 - 40,261,531 (+)	NCBI
RGSC_v3.4	X	58,198,352 - 58,440,335 (+)	RGD
Celera	X	37,542,061 - 37,772,879 (+)	NCBI

Sequence:

show sequence

GCGGCCGCCTCCGACGCTCCAGCCTCCGGACGGACACACAAAAGCCACCCTCTCCCTGTCGCCC
ACCCCAGGAGGCTGCGGCCGGCCACTGACCCCACCTGAGGGCGCAGCGGGCTGCGGACTTGGCT
TTCTGTCCGAGCTCCGCGTCCCACGCGGCACCAACCCCGCCGCCCATGGCTCTGATAATGGAAC
CAGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTCGATGACTGCTTACA
GCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAGTGGAGACCAGCTGCTACGCATTACACAT
CAGGAGCTAGAAGATCTGGGAGTCAGCCGTATTGGCCATCAGGAGCTGATCTTGGAGGCAGTCG
ACCTTCTGTGTGCACTGAATTATGGCTTAGAAACAGAAAATCTAAAAACCCTTTCTCACAAGTT
GAATGCGTCTGCCAAAAATCTACAGAACTTCATAACAGGAAGGAGGAGGAGCGGCCATTATGAT
GGGAGGACCAGCCGAAAATTACCAAATGACTTTTTGACCTCAGTTGTGGATCTGATTGGAGCAG
CCAAGAGTCTTCTTGCTTGGTTGGACAGGTCACCATTTGCTGCTGTGACAGACTATTCAGTCAC
AAGAAATAATGTCATACAACTCTGCTTGGAGTTAACAACAATTGTGCAACAGGATTGCACTGTC
TATGAAACTGAAAATAAAATTCTTCATGTGTGTAAAACTCTTTCTGGGGTCTGTGACCACATCA
TATCCCTGTCGTCAGATCCTCTGGTTTCACAGTCTGCTCACCTTGAAGTGATTCAGCTGGCAAA
TATCAAACCAAGTGAAGGGCTGGGTATGTATATTAAATCCACATATGATGGCCTCCATGTAATT
ACGGGAACCACAGAAAATTCACCTGCAGATCGGTGCAAGAAAATCCACGCTGGGGATGAAGTGA
TTCAAGTCAATCATCAGACTGTGGTGGGGTGGCAGTTGAAAAATTTGGTGAATGCACTACGAGA
GGACCCGAGTGGTGTTATCTTAACTTTGAAAAAGCGACCTCAGAGCATGCTTACCTCAGCACCA
GCTTTACTGAAAAATATGAGATGGAAGCCCCTTGCTCTGCAGCCTCTTATACCTAGAAGTCCCA
CAAGCAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTCTGCTCT
CCAGGATCTCTACATCCCCCCTCCTCCTGCAGAACCATACATTCCCAGGGACGAAAAAGGAAAC
CTTCCTTGTGAAGATCTCAGAGGACATATGGTGGGCAAGCCAGTTCATAAGGGATCTGAATCCC
CCAATTCATTTCTGGACCAGGAATATCGAAAGAGGTTTAACATTGTTGAAGAAGACACTGTCTT
ATATTGCTATGAATATGAAAAAGGACGATCAAGTAGTCAAGGAAGACGAGAAAGCACACCAACC
TATGGCAAGCTACGACCTATATCTATGCCAGTCGAATATAATTGGGTGGGGGACTATGAAGATC
CAAATAAGATGAAGAGAGATAGTAGAAGAGAAAACTCTCTACTTCGATACATGAGCAATGAAAA
AATTGCTCAAGAAGAATACATGTTTCAGAGAAACAGCAAAAAGGACACAGGGAAGAAGTCAAAA
AAGAAGGGTGATAAGAGTACTAGCCCAACTCACTACTCCTTGCTGCCTAGTTTGCAAATGGATG
CATTGAGACAAGACATCATGGGCACACCAGTGCCAGAAACCACACTGTACCATACATTTCAGCA
GTCCTCTCTGCAGCACAAATCAAAGAAGAAAAACAAAGGAGCTATAGCAGGCAAGAGCAAAAGA
AGAATTTCTTGCAAGGATCTTGGCCGTGGTGACTGTGAAGGATGGCTTTGGAAAAAGAAAGATG
CAAAGAGCTATTTTTCACAGAAATGGAAGAAGTACTGGTTTGTCCTAAAGGATGCATCCTTGTA
CTGGTATATTAATGAAGAGGATGAAAAAGCAGAGGGATTCATCAGTCTGCCTGAATTTAAAATC
GATAGAGCCAGTGAATGCCGCAAGAAATATGCATTCAAGGCCTGCCATCCTAAAATCAAAAGCT
TTTATTTCGCTGCTGAGCATCTCGATGACATGAACAGGTGGCTTAATAGAATTAACATGCTGAC
TGCAGGATATGCCGAAAGAGAGAGGATTAAACAAGAACAAGATTACTGGAGTGAGAGTGACAAA
GAAGAAGCAGATACTCCATCAACACCAAAACAAGACAGCCCTCCACCCCCATATGACACATACC
CACGGCCTCCCTCTATGAGTTGTGCCAGTCCTTATGTGGAAGCAAAACACAGCCGGCTTTCCTC
CACAGAGACCTCTCAGTCTCAGTCTTCACATGAGGAATTTCGACAGGAAGTTACTGGGAGCAGT
GCTGTGTCCCCCATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATCGAGACGC
CACTGACAAGTTCAGGCTTACACTATCTTCAGACTCTGCCTCTGGAAGATTCTGTCTTCTCTGA
CTCGGCAGCCATCTCCCCTGAGCACAGGCGGCAGTCCACTCTTCCAACTCAGAAGTGCCACCTC
CAGGATCATTATGGCCCATACCCTTTAGCTGAGAGCGAGAGGATGCAAGTGTTGAATGGCAATG
GGGGCAAGCCTCGAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAACGC
ACCAGTTAGTGCCTGCGATCCACAAGATGACATACAGCCACCAGAGGTGGAGGAAGAAGAGGAG
GAGGAGGAAGAGGAGGCAGCAGGAGAAAACATAGGCGAGAAAAGCTAATACACTGCGAGAGTTG
GTAGAACCTCTCCATGCCATATCGGATCCACTTCTGTTGGCACTCAACCCATTGGAATCACAGA
TTGATAAGCTAATGTTTAGAGAATTTAGATGGAAGAGAGTCGGCACGGCGCAGACTCAACATCA
ACCTCTTGCAAGCAACTAAAATGGCCTCGTCCTTGCTGTTTATAACAGAAAACAGACTTGTAAA
AAGCTTAGATCATCAAGTGTTGTGGATTTGGGGCCTCTAAAGGGATATTAAGAGGGGCAGGCCA
CTCTTAAGAAGAATTCGAGCTTTCAACAATGGGACTAGCATAAGATCAAAGCCAATCAAGATGG
ACCACAGTAGCCGAGAACTGCCCTTTTTATGGGAGAACAGAGGGTAAAGGGTCTTGCCTGGGGA
AGGGTTCTGTGGCGACACCTCAGTTGTCTTCTCCTGACATCAGGAAGAGAGGGCTCAGCACCAA
TGATTAGAAAATCCTGGCTGTTAAATGGACTCTTGGTGGGATGGCAAGACTCTTCATTGTTAAG
GCAAAGCAGCGGAAGCAAATTCTGTGTTAAGTGTATTTGCATTTTTCAAATTTGACATGCTGTA
TTGTACTAAATTAAGTGTAATCTATTAAGGCAAGGTGTACACACCCTGCTCAGAAACTCAATAT
GTTTATTCTATTATTAAAGCATATTCAGGTGTAAGGCAGACTGCTTTCAGTGACACTAATGAAG
GAAATTTCTCATGCCAGGCATTATTAGATTCCTCAGCGAAAAATCCTAACTTTCTCCTTTTCCT
TGGCACTTACATAGAAGTGATGTTGCCTCATAAGCTGGAATGAGCTATTCTTTTTCTGTAAAAT
ATTCCAATCTATAGGCTGTGGTTTTCCATATTTGAAAAAGTATTTTGTCTGGATGTCTTTCAAA
TTAGCTTCAGATATTATTTCATACTCTGTAACTGGGCCCCCGTGGCTCAATATTGCTTCTTTTT
TCTTCTGTGGTAGATGTGAAATTTCCTTTAGTTGGATGAGGTACACTGTAATGATTTTAATGCT
AATTAATGAATATTTCATACTTGTGCAGTGAAAAAATAATTTAATATTGTATTATGAAATGTTT
TTCTTCCTGTTGCTGCAGTGTGTGGTATTGCATAATATGAATACCTGTAAAAAATATAAATTGC
TTAAAAATAAAAATATTACCAGTTGGTACCAGATCTTTTTAGATAGCTAAATAATTTGCTAAGT
ATGCTTGATAGCAAATATCTTTCTAACAAAGAAAAATCTATGCTTCTTTCTCACAAATGAAATT
TGTGTTGTGAATAAAAATCACATTGATCTGCCTTAGAATTGCCTCTGTGCTCTAACCATTTTCA
TGTGTTTTTAAGTATATCTAAAGATTGGTAGTTCTTGGTATAGAGAAATAAGTCATATTTATTT
TATTGGCATTTAATATTAATGAAATTCTCTTGGGTCATGTTCCCTGTTTAAATCTGAGTAAAAC
TTTATGATCTGAAGAATTTTGGGGGGACAGGGGGTTCCTCATTAATGAGTGTGGTGACTGTGTA
TTAATTTTCAAATAAAATCCCTTAGTTTGGCTTTGAAA

hide sequence

RefSeq Acc Id:

XM_008773224 ⟹ XP_008771446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,722,955 - 40,971,730 (+)	NCBI
mRatBN7.2	X	36,908,308 - 37,148,337 (+)	NCBI
Rnor_6.0	X	39,711,001 - 39,953,860 (+)	NCBI

Sequence:

show sequence

AGTTGGCTGCGGCCGTGCGCCGGCGTCTCTTCCCTTCCCCGCCGCGACCCTCGGCGGCTCGAGC
CATGAACTGAAGCCCCTCGGGACGCACACCCCGGGCTGAGCCGCGGACGCTGCAGCTGCGGTGG
CAGCCTGGGCTGGGACAGAGCCGACCCCGGCGCGTTATCCCGGCCGGCCGGCTGGCCGTCGCCG
CTCCCACCGCGGCCGCCTCCGACGCTCCAGCCTCCGGACGGACACACAAAAGCCACCCTCTCCC
TGTCGCCCACCCCAGGAGGCTGCGGCCGGCCACTGACCCCACCTGAGGGCGCAGCGGGCTGCGG
ACTTGGCTTTCTGTCCGAGCTCCGCGTCCCACGCGGCACCAACCCCGCCGCCCATGGCTCTGAT
AATGGAACCAGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTCGATGAC
TGCTTACAGCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAGTGGAGACCAGCTGCTACGCA
TTACACATCAGGAGCTAGAAGATCTGGGAGTCAGCCGTATTGGCCATCAGGAGCTGATCTTGGA
GGCAGTCGACCTTCTGTGTGCACTGAATTATGGCTTAGAAACAGAAAATCTAAAAACCCTTTCT
CACAAGTTGAATGCGTCTGCCAAAAATCTACAGAACTTCATAACAGGAAGGAGGAGGAGCGGCC
ATTATGATGGGAGGACCAGCCGAAAATTACCAAATGACTTTTTGACCTCAGTTGTGGATCTGAT
TGGAGCAGCCAAGAGTCTTCTTGCTTGGTTGGACAGGTCACCATTTGCTGCTGTGACAGACTAT
TCAGTCACAAGAAATAATGTCATACAACTCTGCTTGGAGTTAACAACAATTGTGCAACAGGATT
GCACTGTCTATGAAACTGAAAATAAAATTCTTCATGTGTGTAAAACTCTTTCTGGGGTCTGTGA
CCACATCATATCCCTGTCGTCAGATCCTCTGGTTTCACAGTCTGCTCACCTTGAAGTGATTCAG
CTGGCAAATATCAAACCAAGTGAAGGGCTGGGTATGTATATTAAATCCACATATGATGGCCTCC
ATGTAATTACGGGAACCACAGAAAATTCACCTGCAGATCGGTGCAAGAAAATCCACGCTGGGGA
TGAAGTGATTCAAGTCAATCATCAGACTGTGGTGGGGTGGCAGTTGAAAAATTTGGTGAATGCA
CTACGAGAGGACCCGAGTGGTGTTATCTTAACTTTGAAAAAGCGACCTCAGAGCATGCTTACCT
CAGCACCAGCTTTACTGAAAAATATGAGATGGAAGCCCCTTGCTCTGCAGCCTCTTATACCTAG
AAGTCCCACAAGCAGCGTTGCCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGT
TCTGCTCTCCAGGATCTCTACATCCCCCCTCCTCCTGCAGAACCATACATTCCCAGGGACGAAA
AAGGAAACCTTCCTTGTGAAGATCTCAGAGGACATATGGTGGGCAAGCCAGTTCATAAGGGATC
TGAATCCCCCAATTCATTTCTGGACCAGGAATATCGAAAGAGGTTTAACATTGTTGAAGAAGAC
ACTGTCTTATATTGCTATGAATATGAAAAAGGACGATCAAGTAGTCAAGGAAGACGAGAAAGCA
CACCAACCTATGAAAACTCTCTACTTCGATACATGAGCAATGAAAAAATTGCTCAAGAAGAATA
CATGTTTCAGAGAAACAGCAAAAAGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGATAAGAGT
ACTAGCCCAACTCACTACTCCTTGCTGCCTAGTTTGCAAATGGATGCATTGAGACAAGACATCA
TGGGCACACCAGTGCCAGAAACCACACTGTACCATACATTTCAGCAGTCCTCTCTGCAGCACAA
ATCAAAGAAGAAAAACAAAGGAGCTATAGCAGGCAAGAGCAAAAGAAGAATTTCTTGCAAGGAT
CTTGGCCGTGGTGACTGTGAAGGATGGCTTTGGAAAAAGAAAGATGCAAAGAGCTATTTTTCAC
AGAAATGGAAGAAGTACTGGTTTGTCCTAAAGGATGCATCCTTGTACTGGTATATTAATGAAGA
GGATGAAAAAGCAGAGGGATTCATCAGTCTGCCTGAATTTAAAATCGATAGAGCCAGTGAATGC
CGCAAGAAATATGCATTCAAGGCCTGCCATCCTAAAATCAAAAGCTTTTATTTCGCTGCTGAGC
ATCTCGATGACATGAACAGGTGGCTTAATAGAATTAACATGCTGACTGCAGGATATGCCGAAAG
AGAGAGGATTAAACAAGAACAAGATTACTGGAGTGAGAGTGACAAAGAAGAAGCAGATACTCCA
TCAACACCAAAACAAGACAGCCCTCCACCCCCATATGACACATACCCACGGCCTCCCTCTATGA
GTTGTGCCAGTCCTTATGTGGAAGCAAAACACAGCCGGCTTTCCTCCACAGAGACCTCTCAGTC
TCAGTCTTCACATGAGGAATTTCGACAGGAAGTTACTGGGAGCAGTGCTGTGTCCCCCATTCGC
AAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATCGAGACGCCACTGACAAGTTCAGGCT
TACACTATCTTCAGACTCTGCCTCTGGAAGATTCTGTCTTCTCTGACTCGGCAGCCATCTCCCC
TGAGCACAGGCGGCAGTCCACTCTTCCAACTCAGAAGTGCCACCTCCAGGATCATTATGGCCCA
TACCCTTTAGCTGAGAGCGAGAGGATGCAAGTGTTGAATGGCAATGGGGGCAAGCCTCGAAGTT
TTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAACGCACCAGTTAGTGCCTGCGA
TCCACAAGATGACATACAGCCACCAGAGGTGGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGCA
GCAGGAGAAAACATAGGCGAGAAAAATGAAAATAGGGAAGAAAAGTTAGGAGACTCCTTGCAAG
ATTTATACAGGGCACTGGAGGAAGCCAGTCTGTCACCACTAGGAGAACATCGCATTTCAACCAA
GATCGAATACAAACTATCGTTCATAAAACGATGCAATGATCCTGTGATGAATGAGAAGCTGCAC
AGGCTGAGAATTCTTAAAAGCACTTTAAAGGCCAGAGAAGGGGAAGTAGCCATTATTGATAAAG
TCCTAGACAATCCAGACTTGACATCTAAAGAATTCCAACAATGGAAGCAGATGTACCTCGACCT
TTTCTTGGATATCTGTCAAAACACCACCTCAAATGACCCACTAAGTATTTCTTCTGAAGTAGAT
GTTATCACTTCCTCTCTAACACATACTCATTCGTACATTGAGACACACGTGTAAGTGCATTCTC
ACTCGAGGCCATCTAGTACCTGCTGGTACTCTGAATAAGTACATAAGGTAGTTTTTTATCAGTG
TGTTGGATACTTGACAAGCTATACTTTAATGTTACCAAACTATATGAAACAAAGCATACATGGT
CACATTACCACTGTCTTTAAAGAGCATTTGTATGTTTTATATGCAGTCAGTGCTCAGCTTATGT
TTACTGTGTGCGAAATCAACTATCTTTAATGACTTAAATTAACTTTTGCAGACAATTCTGAAAA
CAGGTGATCTTCAAGTAGAAAAAACACAAAAAGGCAGTTTTCTATTTGAAGTCATCTCTTCTCC
CTTTAAGTTAATTTTATATAAATGAGACTTCAAACGTAAATCAAAATTTTTTCAGGTGCAGACA
TCCTTGTGGGTGGGAAAGAATTTAAACCTTTTTATATTTATTAAAATGTTCTAAGAATTTTCTT
AAACATTGCACAAAGTTTAATGCTGTAGTTTTATTTTTATGAAATGTAGGTGTGTATAAGAGTT
AAGCAAACTAGAAGAGCATGAACATAAGAAAAGTTCAGGTCAAATATCTGTCTTAACAGTCTAT
TAACTCGTGCTAACTGGTTAATGGAGGTTCTAGTCCAAATCTATGAGAACACTGCATGGTGTAT
CAGGGCAAAGCTTTGTAAGATGTTTTTGTAACTAAGACCAAAATTGAAGATAGAGCTGCTTTAT
TTTCTTGGTTTAAATCTTCCTTTATTTTTGTAGTGATGAAATGCTGATTGTGTACAGAAGAACT
TAAGAATGGATTTTTTAAAACAGACTTAACTCACCCAGAAAGGCAGCTAACAGCTACACCACAC
ACACACACACACACACACACACACACACACACACACACACACACACAATTTCAGCCCAAACGTG
TCTTTTGACTCTTAACTTTTAAAAGACAAGGTATACACTGAAATGAGTACATTTTCCAGGCAGT
TTCCAATTTTCTCTCGGTCTGTAACTAAACTTCTGTAATTATACATCAGGCAAGGAAGCAAAAT
GCAGTTTGGTGGTGGCAGATAGAAGCTACAGTAGAGAAAACAATGTTGAAAAATCATTAATGGA
TTTCTCTACTAAGGAAAAGAGAGGATGGCAGTCATTCAGGGAGTTATTACATTGAGTAGCCTGA
GATCAAGCACTTAGAGTTTTTCCTAGAGTCCTGAACTGTTTATAGAGCGGGTGGAGTCTATGAA
AAAGTCCTCTTCACATATTGCCATTTCTGTGTCTAGTTTTGGAAAGTGACCACAGCATGAAAGT
GACTTGCTGCTTTTTAGTGTGTGGCTGCATAATATACAAGTCACAATTTGCTGTTTTTTCAGGA
GGAAAAGACCCTCCTTTACTATTCTATATCCTAAAATCTACTTCTGATCAGCTTTATCCTGTTG
CCTGTACAGCTCAGTGAATGTATTTACATCTCTAAGAGTTCAGATATATGCCAGTGAATATTTT
TGCTGTAGAGAAGAAAGTAAAAACTACACAGCGGGATCTTTTTCTTTGCTTTTGAAATCACGTT
AAATCACTCTCGTTTTGCAGACTTTGCACAACTGTACAGGAAAGTGGCCTTTCTACAGCGCATT
TTCAGTAATCCTATATTTAGTCAAAATGGATGAGAAACATGCATTAATGTTTGTATGGAGTTGT
GGGTCCCGTGTAATATTTTTATCATTTAGAAAACCCTATTTGTAAAAAAAAAAATTTATTTACT
GCATGGTTATTGACGCACATTAAATTTGTGGGATTTTGTATATGTAAAAGAAAGAGAGAAAGAG
AGAACAAAGAACAAAACCCCTCTTGTGGTAAATTGAAGTGTGCTTGTTACAATTCTTTAGGCAT
ATTGATGTTTACTAGACCAATGTGTATCTTCACTTAAAATTATTTGTACATGACGGATATGTTA
TATACAGTGGACAAACAGCCTGCAAGCAACAGGCAGTTGGTGGGAAGACTAGCTCTGTGGCTAG
TAAGCAGCTTCTACTTTTGTAAAGTCAGCTGTTATTTTACTGGTAAAAAATTAAACTCATGAAT
TTTGTAAGACTGGTGAGTTATCAGCCTAGCCTAGCGTGAAAGAGACCTTTTAACACTATATACC
TGTGCATTTGATTGCATTAGTTTCAAATCTAGGAGAGAGGCAGCACTGTAAACTGAAGTCAAAT
AAATTCAGCTCTTAATGAATCCTTA

hide sequence

RefSeq Acc Id:

XM_017602144 ⟹ XP_017457633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,722,843 - 40,971,730 (+)	NCBI
mRatBN7.2	X	36,908,308 - 37,148,337 (+)	NCBI
Rnor_6.0	X	39,711,002 - 39,953,860 (+)	NCBI

Sequence:

show sequence

GTTGGCTGCGGCCGTGCGCCGGCGTCTCTTCCCTTCCCCGCCGCGACCCTCGGCGGCTCGAGCC
ATGAACTGAAGCCCCTCGGGACGCACACCCCGGGCTGAGCCGCGGACGCTGCAGCTGCGGTGGC
AGCCTGGGCTGGGACAGAGCCGACCCCGGCGCGTTATCCCGGCCGGCCGGCTGGCCGTCGCCGC
TCCCACCGCGGCCGCCTCCGACGCTCCAGCCTCCGGACGGACACACAAAAGCCACCCTCTCCCT
GTCGCCCACCCCAGGAGGCTGCGGCCGGCCACTGACCCCACCTGAGGGCGCAGCGGGCTGCGGA
CTTGGCTTTCTGTCCGAGCTCCGCGTCCCACGCGGCACCAACCCCGCCGCCCATGGCTCTGATA
ATGGAACCAGTGAGCAAATGGTCTCCGAGTCAAGTAGTGGACTGGATGAAAGGTCTCGATGACT
GCTTACAGCAGTATATTAAGAACTTTGAGAGGGAGAAGATCAGTGGAGACCAGCTGCTACGCAT
TACACATCAGGAGCTAGAAGATCTGGGAGTCAGCCGTATTGGCCATCAGGAGCTGATCTTGGAG
GCAGTCGACCTTCTGTGTGCACTGAATTATGGCTTAGAAACAGAAAATCTAAAAACCCTTTCTC
ACAAGTTGAATGCGTCTGCCAAAAATCTACAGAACTTCATAACAGGAAGGAGGAGGAGCGGCCA
TTATGATGGGAGGACCAGCCGAAAATTACCAAATGACTTTTTGACCTCAGTTGTGGATCTGATT
GGAGCAGCCAAGAGTCTTCTTGCTTGGTTGGACAGGTCACCATTTGCTGCTGTGACAGACTATT
CAGTCACAAGAAATAATGTCATACAACTCTGCTTGGAGTTAACAACAATTGTGCAACAGGATTG
CACTGTCTATGAAACTGAAAATAAAATTCTTCATGTGTGTAAAACTCTTTCTGGGGTCTGTGAC
CACATCATATCCCTGTCGTCAGATCCTCTGGTTTCACAGTCTGCTCACCTTGAAGTGATTCAGC
TGGCAAATATCAAACCAAGTGAAGGGCTGGGTATGTATATTAAATCCACATATGATGGCCTCCA
TGTAATTACGGGAACCACAGAAAATTCACCTGCAGATCGGTGCAAGAAAATCCACGCTGGGGAT
GAAGTGATTCAAGTCAATCATCAGACTGTGCCTCTTATACCTAGAAGTCCCACAAGCAGCGTTG
CCACGCCTTCCAGCACCATCAGTACACCCACCAAAAGAGACAGTTCTGCTCTCCAGGATCTCTA
CATCCCCCCTCCTCCTGCAGAACCATACATTCCCAGGGACGAAAAAGGAAACCTTCCTTGTGAA
GATCTCAGAGGACATATGGTGGGCAAGCCAGTTCATAAGGGATCTGAATCCCCCAATTCATTTC
TGGACCAGGAATATCGAAAGAGGTTTAACATTGTTGAAGAAGACACTGTCTTATATTGCTATGA
ATATGAAAAAGGACGATCAAGTAGTCAAGGAAGACGAGAAAGCACACCAACCTATGGCAAGCTA
CGACCTATATCTATGCCAGTCGAATATAATTGGGTGGGGGACTATGAAGATCCAAATAAGATGA
AGAGAGATAGTAGAAGAGAAAACTCTCTACTTCGATACATGAGCAATGAAAAAATTGCTCAAGA
AGAATACATGTTTCAGAGAAACAGCAAAAAGGACACAGGGAAGAAGTCAAAAAAGAAGGGTGAT
AAGAGTACTAGCCCAACTCACTACTCCTTGCTGCCTAGTTTGCAAATGGATGCATTGAGACAAG
ACATCATGGGCACACCAGTGCCAGAAACCACACTGTACCATACATTTCAGCAGTCCTCTCTGCA
GCACAAATCAAAGAAGAAAAACAAAGGAGCTATAGCAGGCAAGAGCAAAAGAAGAATTTCTTGC
AAGGATCTTGGCCGTGGTGACTGTGAAGGATGGCTTTGGAAAAAGAAAGATGCAAAGAGCTATT
TTTCACAGAAATGGAAGAAGTACTGGTTTGTCCTAAAGGATGCATCCTTGTACTGGTATATTAA
TGAAGAGGATGAAAAAGCAGAGGGATTCATCAGTCTGCCTGAATTTAAAATCGATAGAGCCAGT
GAATGCCGCAAGAAATATGCATTCAAGGCCTGCCATCCTAAAATCAAAAGCTTTTATTTCGCTG
CTGAGCATCTCGATGACATGAACAGGTGGCTTAATAGAATTAACATGCTGACTGCAGGATATGC
CGAAAGAGAGAGGATTAAACAAGAACAAGATTACTGGAGTGAGAGTGACAAAGAAGAAGCAGAT
ACTCCATCAACACCAAAACAAGACAGCCCTCCACCCCCATATGACACATACCCACGGCCTCCCT
CTATGAGTTGTGCCAGTCCTTATGTGGAAGCAAAACACAGCCGGCTTTCCTCCACAGAGACCTC
TCAGTCTCAGTCTTCACATGAGGAATTTCGACAGGAAGTTACTGGGAGCAGTGCTGTGTCCCCC
ATTCGCAAGACAGCCAGTCAGCGCCGCTCCTGGCAGGATTTAATCGAGACGCCACTGACAAGTT
CAGGCTTACACTATCTTCAGACTCTGCCTCTGGAAGATTCTGTCTTCTCTGACTCGGCAGCCAT
CTCCCCTGAGCACAGGCGGCAGTCCACTCTTCCAACTCAGAAGTGCCACCTCCAGGATCATTAT
GGCCCATACCCTTTAGCTGAGAGCGAGAGGATGCAAGTGTTGAATGGCAATGGGGGCAAGCCTC
GAAGTTTTACTCTGCCTCGAGATAGCGGGTTCAACCATTGCTGTCTGAACGCACCAGTTAGTGC
CTGCGATCCACAAGATGACATACAGCCACCAGAGGTGGAGGAAGAAGAGGAGGAGGAGGAAGAG
GAGGCAGCAGGAGAAAACATAGGCGAGAAAAATGAAAATAGGGAAGAAAAGTTAGGAGACTCCT
TGCAAGATTTATACAGGGCACTGGAGGAAGCCAGTCTGTCACCACTAGGAGAACATCGCATTTC
AACCAAGATCGAATACAAACTATCGTTCATAAAACGATGCAATGATCCTGTGATGAATGAGAAG
CTGCACAGGCTGAGAATTCTTAAAAGCACTTTAAAGGCCAGAGAAGGGGAAGTAGCCATTATTG
ATAAAGTCCTAGACAATCCAGACTTGACATCTAAAGAATTCCAACAATGGAAGCAGATGTACCT
CGACCTTTTCTTGGATATCTGTCAAAACACCACCTCAAATGACCCACTAAGTATTTCTTCTGAA
GTAGATGTTATCACTTCCTCTCTAACACATACTCATTCGTACATTGAGACACACGTGTAAGTGC
ATTCTCACTCGAGGCCATCTAGTACCTGCTGGTACTCTGAATAAGTACATAAGGTAGTTTTTTA
TCAGTGTGTTGGATACTTGACAAGCTATACTTTAATGTTACCAAACTATATGAAACAAAGCATA
CATGGTCACATTACCACTGTCTTTAAAGAGCATTTGTATGTTTTATATGCAGTCAGTGCTCAGC
TTATGTTTACTGTGTGCGAAATCAACTATCTTTAATGACTTAAATTAACTTTTGCAGACAATTC
TGAAAACAGGTGATCTTCAAGTAGAAAAAACACAAAAAGGCAGTTTTCTATTTGAAGTCATCTC
TTCTCCCTTTAAGTTAATTTTATATAAATGAGACTTCAAACGTAAATCAAAATTTTTTCAGGTG
CAGACATCCTTGTGGGTGGGAAAGAATTTAAACCTTTTTATATTTATTAAAATGTTCTAAGAAT
TTTCTTAAACATTGCACAAAGTTTAATGCTGTAGTTTTATTTTTATGAAATGTAGGTGTGTATA
AGAGTTAAGCAAACTAGAAGAGCATGAACATAAGAAAAGTTCAGGTCAAATATCTGTCTTAACA
GTCTATTAACTCGTGCTAACTGGTTAATGGAGGTTCTAGTCCAAATCTATGAGAACACTGCATG
GTGTATCAGGGCAAAGCTTTGTAAGATGTTTTTGTAACTAAGACCAAAATTGAAGATAGAGCTG
CTTTATTTTCTTGGTTTAAATCTTCCTTTATTTTTGTAGTGATGAAATGCTGATTGTGTACAGA
AGAACTTAAGAATGGATTTTTTAAAACAGACTTAACTCACCCAGAAAGGCAGCTAACAGCTACA
CCACACACACACACACACACACACACACACACACACACACACACACACACACAATTTCAGCCCA
AACGTGTCTTTTGACTCTTAACTTTTAAAAGACAAGGTATACACTGAAATGAGTACATTTTCCA
GGCAGTTTCCAATTTTCTCTCGGTCTGTAACTAAACTTCTGTAATTATACATCAGGCAAGGAAG
CAAAATGCAGTTTGGTGGTGGCAGATAGAAGCTACAGTAGAGAAAACAATGTTGAAAAATCATT
AATGGATTTCTCTACTAAGGAAAAGAGAGGATGGCAGTCATTCAGGGAGTTATTACATTGAGTA
GCCTGAGATCAAGCACTTAGAGTTTTTCCTAGAGTCCTGAACTGTTTATAGAGCGGGTGGAGTC
TATGAAAAAGTCCTCTTCACATATTGCCATTTCTGTGTCTAGTTTTGGAAAGTGACCACAGCAT
GAAAGTGACTTGCTGCTTTTTAGTGTGTGGCTGCATAATATACAAGTCACAATTTGCTGTTTTT
TCAGGAGGAAAAGACCCTCCTTTACTATTCTATATCCTAAAATCTACTTCTGATCAGCTTTATC
CTGTTGCCTGTACAGCTCAGTGAATGTATTTACATCTCTAAGAGTTCAGATATATGCCAGTGAA
TATTTTTGCTGTAGAGAAGAAAGTAAAAACTACACAGCGGGATCTTTTTCTTTGCTTTTGAAAT
CACGTTAAATCACTCTCGTTTTGCAGACTTTGCACAACTGTACAGGAAAGTGGCCTTTCTACAG
CGCATTTTCAGTAATCCTATATTTAGTCAAAATGGATGAGAAACATGCATTAATGTTTGTATGG
AGTTGTGGGTCCCGTGTAATATTTTTATCATTTAGAAAACCCTATTTGTAAAAAAAAAAATTTA
TTTACTGCATGGTTATTGACGCACATTAAATTTGTGGGATTTTGTATATGTAAAAGAAAGAGAG
AAAGAGAGAACAAAGAACAAAACCCCTCTTGTGGTAAATTGAAGTGTGCTTGTTACAATTCTTT
AGGCATATTGATGTTTACTAGACCAATGTGTATCTTCACTTAAAATTATTTGTACATGACGGAT
ATGTTATATACAGTGGACAAACAGCCTGCAAGCAACAGGCAGTTGGTGGGAAGACTAGCTCTGT
GGCTAGTAAGCAGCTTCTACTTTTGTAAAGTCAGCTGTTATTTTACTGGTAAAAAATTAAACTC
ATGAATTTTGTAAGACTGGTGAGTTATCAGCCTAGCCTAGCGTGAAAGAGACCTTTTAACACTA
TATACCTGTGCATTTGATTGCATTAGTTTCAAATCTAGGAGAGAGGCAGCACTGTAAACTGAAG
TCAAATAAATTCAGCTCTTAATGAATCCTTA

hide sequence

RefSeq Acc Id:

XM_039100001 ⟹ XP_038955929

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,722,849 - 40,971,730 (+)	NCBI
mRatBN7.2	X	36,908,308 - 37,148,337 (+)	NCBI

RefSeq Acc Id:

XM_063280272 ⟹ XP_063136342

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	40,722,843 - 40,954,299 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001106837	(Get FASTA)	NCBI Sequence Viewer
	NP_067718	(Get FASTA)	NCBI Sequence Viewer
	XP_008771446	(Get FASTA)	NCBI Sequence Viewer
	XP_017457633	(Get FASTA)	NCBI Sequence Viewer
	XP_038955929	(Get FASTA)	NCBI Sequence Viewer
	XP_063136342	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD04567	(Get FASTA)	NCBI Sequence Viewer
	AAD04568	(Get FASTA)	NCBI Sequence Viewer
	EDL96122	(Get FASTA)	NCBI Sequence Viewer
	EDL96123	(Get FASTA)	NCBI Sequence Viewer
	EDL96124	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009802
	ENSRNOP00000009802.3
	ENSRNOP00000071915
	ENSRNOP00000071915.1
	ENSRNOP00000084300
	ENSRNOP00000084300.1
GenBank Protein	Q9Z1T4	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_067718 ⟸ NM_021686
- Peptide Label:	isoform 2
- UniProtKB:	A6IPP1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALIMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQE LILEAVDLLCALNYGLETENLKTLSHKLNASAKNLQNFITGRRRSGHYDGRTSRKLPNDFLTSV VDLIGAAKSLLAWLDRSPFAAVTDYSVTRNNVIQLCLELTTIVQQDCTVYETENKILHVCKTLS GVCDHIISLSSDPLVSQSAHLEVIQLANIKPSEGLGMYIKSTYDGLHVITGTTENSPADRCKKI HAGDEVIQVNHQTVVGWQLKNLVNALREDPSGVILTLKKRPQSMLTSAPALLKNMRWKPLALQP LIPRSPTSSVATPSSTISTPTKRDSSALQDLYIPPPPAEPYIPRDEKGNLPCEDLRGHMVGKPV HKGSESPNSFLDQEYRKRFNIVEEDTVLYCYEYEKGRSSSQGRRESTPTYGKLRPISMPVEYNW VGDYEDPNKMKRDSRRENSLLRYMSNEKIAQEEYMFQRNSKKDTGKKSKKKGDKSTSPTHYSLL PSLQMDALRQDIMGTPVPETTLYHTFQQSSLQHKSKKKNKGAIAGKSKRRISCKDLGRGDCEGW LWKKKDAKSYFSQKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRASECRKKYAFKAC HPKIKSFYFAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDKEEADTPSTPKQDSPP PPYDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGSSAVSPIRKTASQRRSW QDLIETPLTSSGLHYLQTLPLEDSVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPYPLAESERM QVLNGNGGKPRSFTLPRDSGFNHCCLNAPVSACDPQDDIQPPEVEEEEEEEEEEAAGENIGEKS hide sequence

RefSeq Acc Id:	NP_001106837 ⟸ NM_001113366
- Peptide Label:	isoform 1
- UniProtKB:	Q9R093 (UniProtKB/Swiss-Prot), Q9Z1T4 (UniProtKB/Swiss-Prot), A6IPN9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALIMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQE LILEAVDLLCALNYGLETENLKTLSHKLNASAKNLQNFITGRRRSGHYDGRTSRKLPNDFLTSV VDLIGAAKSLLAWLDRSPFAAVTDYSVTRNNVIQLCLELTTIVQQDCTVYETENKILHVCKTLS GVCDHIISLSSDPLVSQSAHLEVIQLANIKPSEGLGMYIKSTYDGLHVITGTTENSPADRCKKI HAGDEVIQVNHQTVVGWQLKNLVNALREDPSGVILTLKKRPQSMLTSAPALLKNMRWKPLALQP LIPRSPTSSVATPSSTISTPTKRDSSALQDLYIPPPPAEPYIPRDEKGNLPCEDLRGHMVGKPV HKGSESPNSFLDQEYRKRFNIVEEDTVLYCYEYEKGRSSSQGRRESTPTYGKLRPISMPVEYNW VGDYEDPNKMKRDSRRENSLLRYMSNEKIAQEEYMFQRNSKKDTGKKSKKKGDKSTSPTHYSLL PSLQMDALRQDIMGTPVPETTLYHTFQQSSLQHKSKKKNKGAIAGKSKRRISCKDLGRGDCEGW LWKKKDAKSYFSQKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKIDRASECRKKYAFKAC HPKIKSFYFAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDKEEADTPSTPKQDSPP PPYDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGSSAVSPIRKTASQRRSW QDLIETPLTSSGLHYLQTLPLEDSVFSDSAAISPEHRRQSTLPTQKCHLQDHYGPYPLAESERM QVLNGNGGKPRSFTLPRDSGFNHCCLNAPVSACDPQDDIQPPEVEEEEEEEEEEAAGENIGEKN ENREEKLGDSLQDLYRALEEASLSPLGEHRISTKIEYKLSFIKRCNDPVMNEKLHRLRILKSTL KAREGEVAIIDKVLDNPDLTSKEFQQWKQMYLDLFLDICQNTTSNDPLSISSEVDVITSSLTHT HSYIETHV hide sequence

RefSeq Acc Id:

XP_008771446 ⟸ XM_008773224

- Peptide Label:

isoform X1

- Sequence:

show sequence

MALIMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQE
LILEAVDLLCALNYGLETENLKTLSHKLNASAKNLQNFITGRRRSGHYDGRTSRKLPNDFLTSV
VDLIGAAKSLLAWLDRSPFAAVTDYSVTRNNVIQLCLELTTIVQQDCTVYETENKILHVCKTLS
GVCDHIISLSSDPLVSQSAHLEVIQLANIKPSEGLGMYIKSTYDGLHVITGTTENSPADRCKKI
HAGDEVIQVNHQTVVGWQLKNLVNALREDPSGVILTLKKRPQSMLTSAPALLKNMRWKPLALQP
LIPRSPTSSVATPSSTISTPTKRDSSALQDLYIPPPPAEPYIPRDEKGNLPCEDLRGHMVGKPV
HKGSESPNSFLDQEYRKRFNIVEEDTVLYCYEYEKGRSSSQGRRESTPTYENSLLRYMSNEKIA
QEEYMFQRNSKKDTGKKSKKKGDKSTSPTHYSLLPSLQMDALRQDIMGTPVPETTLYHTFQQSS
LQHKSKKKNKGAIAGKSKRRISCKDLGRGDCEGWLWKKKDAKSYFSQKWKKYWFVLKDASLYWY
INEEDEKAEGFISLPEFKIDRASECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINMLTAG
YAERERIKQEQDYWSESDKEEADTPSTPKQDSPPPPYDTYPRPPSMSCASPYVEAKHSRLSSTE
TSQSQSSHEEFRQEVTGSSAVSPIRKTASQRRSWQDLIETPLTSSGLHYLQTLPLEDSVFSDSA
AISPEHRRQSTLPTQKCHLQDHYGPYPLAESERMQVLNGNGGKPRSFTLPRDSGFNHCCLNAPV
SACDPQDDIQPPEVEEEEEEEEEEAAGENIGEKNENREEKLGDSLQDLYRALEEASLSPLGEHR
ISTKIEYKLSFIKRCNDPVMNEKLHRLRILKSTLKAREGEVAIIDKVLDNPDLTSKEFQQWKQM
YLDLFLDICQNTTSNDPLSISSEVDVITSSLTHTHSYIETHV

hide sequence

RefSeq Acc Id:	XP_017457633 ⟸ XM_017602144
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A0Z8 (UniProtKB/TrEMBL), A6IPP0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALIMEPVSKWSPSQVVDWMKGLDDCLQQYIKNFEREKISGDQLLRITHQELEDLGVSRIGHQE LILEAVDLLCALNYGLETENLKTLSHKLNASAKNLQNFITGRRRSGHYDGRTSRKLPNDFLTSV VDLIGAAKSLLAWLDRSPFAAVTDYSVTRNNVIQLCLELTTIVQQDCTVYETENKILHVCKTLS GVCDHIISLSSDPLVSQSAHLEVIQLANIKPSEGLGMYIKSTYDGLHVITGTTENSPADRCKKI HAGDEVIQVNHQTVPLIPRSPTSSVATPSSTISTPTKRDSSALQDLYIPPPPAEPYIPRDEKGN LPCEDLRGHMVGKPVHKGSESPNSFLDQEYRKRFNIVEEDTVLYCYEYEKGRSSSQGRRESTPT YGKLRPISMPVEYNWVGDYEDPNKMKRDSRRENSLLRYMSNEKIAQEEYMFQRNSKKDTGKKSK KKGDKSTSPTHYSLLPSLQMDALRQDIMGTPVPETTLYHTFQQSSLQHKSKKKNKGAIAGKSKR RISCKDLGRGDCEGWLWKKKDAKSYFSQKWKKYWFVLKDASLYWYINEEDEKAEGFISLPEFKI DRASECRKKYAFKACHPKIKSFYFAAEHLDDMNRWLNRINMLTAGYAERERIKQEQDYWSESDK EEADTPSTPKQDSPPPPYDTYPRPPSMSCASPYVEAKHSRLSSTETSQSQSSHEEFRQEVTGSS AVSPIRKTASQRRSWQDLIETPLTSSGLHYLQTLPLEDSVFSDSAAISPEHRRQSTLPTQKCHL QDHYGPYPLAESERMQVLNGNGGKPRSFTLPRDSGFNHCCLNAPVSACDPQDDIQPPEVEEEEE EEEEEAAGENIGEKNENREEKLGDSLQDLYRALEEASLSPLGEHRISTKIEYKLSFIKRCNDPV MNEKLHRLRILKSTLKAREGEVAIIDKVLDNPDLTSKEFQQWKQMYLDLFLDICQNTTSNDPLS ISSEVDVITSSLTHTHSYIETHV hide sequence

RefSeq Acc Id:

ENSRNOP00000071915 ⟸ ENSRNOT00000080512

RefSeq Acc Id:

ENSRNOP00000009802 ⟸ ENSRNOT00000009802

RefSeq Acc Id:	XP_038955929 ⟸ XM_039100001
- Peptide Label:	isoform X3

RefSeq Acc Id:

ENSRNOP00000084300 ⟸ ENSRNOT00000095688

RefSeq Acc Id:	XP_063136342 ⟸ XM_063280272
- Peptide Label:	isoform X4

Protein Domains

CRIC DUF1170 PDZ PH SAM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9Z1T4-F1-model_v2	AlphaFold	Q9Z1T4	1-1032	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13701813

Promoter ID:

EPDNEW_R12337

Type:

single initiation site

Name:

Cnksr2_1

Description:

connector enhancer of kinase suppressor of Ras 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	X	39,711,330 - 39,711,390	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:708454	AgrOrtholog
BioCyc Gene	G2FUF-2472	BioCyc
Ensembl Genes	ENSRNOG00000007014	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000009802	ENTREZGENE
	ENSRNOT00000009802.6	UniProtKB/Swiss-Prot
	ENSRNOT00000080512	ENTREZGENE
	ENSRNOT00000080512.2	UniProtKB/Swiss-Prot
	ENSRNOT00000095688.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	2.30.42.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	CNK1-3_SAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CNK2/3_dom	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	CRIC_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:59322	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	59322	ENTREZGENE
PANTHER	CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CONNECTOR ENHANCER OF KINASE SUPPRESSOR OF RAS 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	CRIC_ras_sig	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	DUF1170	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PF00169	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Cnksr2	PhenoGen
PROSITE	CRIC	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PH_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007014	RatGTEx
SMART	PDZ	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SAM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SM00233	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF47769	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSF50156	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I6A0Z8	ENTREZGENE, UniProtKB/TrEMBL
	A6IPN9	ENTREZGENE, UniProtKB/TrEMBL
	A6IPP0	ENTREZGENE, UniProtKB/TrEMBL
	A6IPP1	ENTREZGENE, UniProtKB/TrEMBL
	CNKR2_RAT	UniProtKB/Swiss-Prot
	Q9R093	ENTREZGENE
	Q9Z1T4	ENTREZGENE
UniProt Secondary	Q9R093	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Cnksr2	connector enhancer of kinase suppressor of Ras 2		membrane-associated guanylate kinase-interacting protein	Name updated	1299863	APPROVED
2004-09-10	Cnksr2	membrane-associated guanylate kinase-interacting protein	LOC59322		Symbol and Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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