Pex5l (peroxisomal biogenesis factor 5-like) - Rat Genome Database

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Pathways
Gene: Pex5l (peroxisomal biogenesis factor 5-like) Rattus norvegicus
Analyze
Symbol: Pex5l
Name: peroxisomal biogenesis factor 5-like
RGD ID: 708407
Description: Enables intracellularly cyclic nucleotide-activated monoatomic cation channel activity and small GTPase binding activity. Involved in positive regulation of corticotropin secretion and regulated exocytosis. Located in cell tip and perinuclear region of cytoplasm. Part of intracellular cyclic nucleotide activated cation channel complex. Orthologous to human PEX5L (peroxisomal biogenesis factor 5 like); INTERACTS WITH 3,4-methylenedioxymethamphetamine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: peroxin 2; peroxin-5-related protein; Pex2; PEX5-like protein; PEX5-related protein; pex5Rp; tetratricopeptide repeat-containing Rab8b-interacting protein; TPR-containing Rab8b-interacting protein; TRIP8b; Trjip8b
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82117,623,199 - 117,836,772 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2117,623,199 - 117,836,685 (-)EnsemblGRCr8
mRatBN7.22115,694,868 - 115,908,365 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2122,300,502 - 122,514,052 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02120,413,149 - 120,626,695 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02115,115,247 - 115,325,579 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02119,330,330 - 119,405,809 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2119,330,080 - 119,537,837 (-)Ensemblrn6Rnor6.0
Rnor_5.02138,979,958 - 139,053,451 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42119,130,798 - 119,203,567 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2110,803,018 - 110,875,273 (-)NCBICelera
RGSC_v3.12119,075,759 - 119,284,697 (-)NCBI
Cytogenetic Map2q24NCBI
JBrowse:




References

References - curated
# Reference Title Reference Citation
1. Rab8b and its interacting partner TRIP8b are involved in regulated secretion in AtT20 cells. Chen S, etal., J Biol Chem 2001 Apr 20;276(16):13209-16. Epub 2001 Jan 24.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Association with the auxiliary subunit PEX5R/Trip8b controls responsiveness of HCN channels to cAMP and adrenergic stimulation. Zolles G, etal., Neuron. 2009 Jun 25;62(6):814-25. doi: 10.1016/j.neuron.2009.05.008.
Additional References at PubMed
PMID:11463335   PMID:15564593   PMID:18346465   PMID:18620529   PMID:19439603   PMID:21504900   PMID:21749376   PMID:21795621   PMID:22363812   PMID:23382219   PMID:24451387   PMID:30053369  
PMID:31492750  


Genomics

Comparative Map Data
Pex5l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82117,623,199 - 117,836,772 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2117,623,199 - 117,836,685 (-)EnsemblGRCr8
mRatBN7.22115,694,868 - 115,908,365 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2122,300,502 - 122,514,052 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02120,413,149 - 120,626,695 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02115,115,247 - 115,325,579 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02119,330,330 - 119,405,809 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2119,330,080 - 119,537,837 (-)Ensemblrn6Rnor6.0
Rnor_5.02138,979,958 - 139,053,451 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42119,130,798 - 119,203,567 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2110,803,018 - 110,875,273 (-)NCBICelera
RGSC_v3.12119,075,759 - 119,284,697 (-)NCBI
Cytogenetic Map2q24NCBI
PEX5L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383179,794,958 - 180,036,937 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3179,794,958 - 180,037,053 (-)Ensemblhg38GRCh38
GRCh373179,512,746 - 179,754,725 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363181,000,744 - 181,237,211 (-)NCBIBuild 36Build 36hg18NCBI36
Build 343181,000,751 - 181,237,219NCBI
Celera3177,948,972 - 178,186,430 (-)NCBICelera
Cytogenetic Map3q26.33NCBI
HuRef3176,916,268 - 177,158,948 (-)NCBIHuRef
CHM1_13179,475,820 - 179,718,112 (-)NCBICHM1_1
T2T-CHM13v2.03182,598,483 - 182,840,049 (-)NCBIT2T-CHM13v2.0
Pex5l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39333,002,075 - 33,197,470 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl333,003,557 - 33,197,396 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38332,947,926 - 33,143,302 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl332,949,408 - 33,143,247 (-)Ensemblmm10GRCm38
MGSCv37332,848,553 - 33,042,004 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36333,142,161 - 33,274,578 (-)NCBIMGSCv36mm8
Celera332,856,737 - 33,053,168 (-)NCBICelera
Cytogenetic Map3A3NCBI
cM Map315.94NCBI
Pex5l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554208,930,992 - 9,146,215 (-)Ensembl
ChiLan1.0NW_0049554208,924,399 - 9,146,309 (-)NCBIChiLan1.0ChiLan1.0
PEX5L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22177,660,144 - 177,901,817 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13177,664,861 - 177,906,523 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03176,823,918 - 177,065,528 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13184,993,866 - 185,238,100 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3184,999,947 - 185,237,645 (-)EnsemblpanPan2panpan1.1
PEX5L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13413,187,814 - 13,502,508 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3413,187,807 - 13,416,827 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3417,339,445 - 17,585,549 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03413,085,931 - 13,400,886 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3413,048,375 - 13,315,162 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13413,131,125 - 13,451,357 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03413,113,787 - 13,433,984 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03413,359,766 - 13,675,044 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pex5l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602109,809,710 - 110,025,608 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365663,195,553 - 3,404,705 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365663,195,110 - 3,411,037 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PEX5L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13117,833,705 - 118,088,277 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113117,832,199 - 118,088,383 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213126,930,082 - 127,046,550 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PEX5L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1159,373,826 - 9,613,276 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606318,228,983 - 18,472,873 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pex5l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473057,504,302 - 57,762,999 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473057,504,554 - 57,763,423 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Pex5l
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v13121,796,547 - 122,091,428 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pex5l
1439 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:9
Count of miRNA genes:8
Interacting mature miRNAs:9
Transcripts:ENSRNOT00000015200
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)2105628029150628029Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)282947902127947902Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845370229470703Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)284056790132859658Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283465462229820014Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)220695736231474293Rat
1581576Pur7Proteinuria QTL 70.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)280396178220931218Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)240306867124537199Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278269809208420281Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)227148328145807373Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)280396178220931218Rat
2317886Alcrsp23Alcohol response QTL 232.40.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)295142371140142371Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)278269809123269809Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2100807373145807373Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2106869825151869825Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845182205135428Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283400752223709938Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)228652666139067443Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)293602631145807373Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)280396034220931416Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278269809205135428Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2114384617215381366Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)282214549127214549Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2113746222205135428Rat
7488933Bp368Blood pressure QTL 3680.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2104957381149957381Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2114384617215381366Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2117415288205135428Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979159440891Rat
1581552Pur12Proteinuria QTL 125.190.0009urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2114032149150226270Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283465462225110681Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)2114440891159440891Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)247856345205135428Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979184731399Rat
1354594Despr10Despair related QTL 102e-06locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2116804572161804572Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)230219200171802126Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)276328396209350714Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)230219200171802126Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)261051541143746880Rat

Markers in Region
BE121134  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22115,706,608 - 115,706,804 (+)MAPPERmRatBN7.2
Rnor_6.02119,335,930 - 119,336,125NCBIRnor6.0
Rnor_5.02138,985,558 - 138,985,753UniSTSRnor5.0
RGSC_v3.42119,136,655 - 119,136,850UniSTSRGSC3.4
Celera2110,808,619 - 110,808,814UniSTS
RH 3.4 Map2685.0UniSTS
Cytogenetic Map2q25UniSTS
AU046348  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22115,756,151 - 115,756,311 (+)MAPPERmRatBN7.2
Rnor_6.02119,387,583 - 119,387,742NCBIRnor6.0
Rnor_5.02139,035,225 - 139,035,384UniSTSRnor5.0
RGSC_v3.42119,185,341 - 119,185,500UniSTSRGSC3.4
Celera2110,857,047 - 110,857,206UniSTS
Cytogenetic Map2q25UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 11 61 177 55 54 24 31 24 6 247 119 4 169 80 90 30 26 26

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001393823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393824 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001393831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_173152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF324454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000015200   ⟹   ENSRNOP00000015200
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,703,186 (-)Ensembl
mRatBN7.2 Ensembl2115,700,972 - 115,774,858 (-)Ensembl
Rnor_6.0 Ensembl2119,330,080 - 119,537,837 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097356   ⟹   ENSRNOP00000082985
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,836,501 (-)Ensembl
mRatBN7.2 Ensembl2115,700,972 - 115,851,310 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098944   ⟹   ENSRNOP00000095922
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,779,438 (-)Ensembl
mRatBN7.2 Ensembl2115,700,972 - 115,851,310 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105858   ⟹   ENSRNOP00000092235
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000107964   ⟹   ENSRNOP00000086465
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,779,438 (-)Ensembl
mRatBN7.2 Ensembl2115,700,972 - 115,851,310 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113164   ⟹   ENSRNOP00000094803
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000120122   ⟹   ENSRNOP00000087652
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000120297   ⟹   ENSRNOP00000094453
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2115,700,972 - 115,913,628 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000129287   ⟹   ENSRNOP00000102744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,836,685 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000141428   ⟹   ENSRNOP00000100252
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,705,050 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000147186   ⟹   ENSRNOP00000111871
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,836,501 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000170544   ⟹   ENSRNOP00000107978
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2117,623,199 - 117,836,685 (-)Ensembl
RefSeq Acc Id: NM_001393823   ⟹   NP_001380752
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,685 (-)NCBI
mRatBN7.22115,694,868 - 115,908,365 (-)NCBI
RefSeq Acc Id: NM_001393824   ⟹   NP_001380753
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,685 (-)NCBI
mRatBN7.22115,694,868 - 115,908,365 (-)NCBI
RefSeq Acc Id: NM_001393825   ⟹   NP_001380754
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,685 (-)NCBI
mRatBN7.22115,694,868 - 115,908,365 (-)NCBI
RefSeq Acc Id: NM_001393826   ⟹   NP_001380755
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,685 (-)NCBI
mRatBN7.22115,694,868 - 115,908,365 (-)NCBI
RefSeq Acc Id: NM_001393827   ⟹   NP_001380756
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,779,582 (-)NCBI
mRatBN7.22115,694,868 - 115,851,264 (-)NCBI
RefSeq Acc Id: NM_001393828   ⟹   NP_001380757
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,779,582 (-)NCBI
mRatBN7.22115,694,868 - 115,851,264 (-)NCBI
RefSeq Acc Id: NM_001393829   ⟹   NP_001380758
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,779,582 (-)NCBI
mRatBN7.22115,694,868 - 115,851,264 (-)NCBI
RefSeq Acc Id: NM_001393830   ⟹   NP_001380759
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,779,582 (-)NCBI
mRatBN7.22115,694,868 - 115,851,264 (-)NCBI
RefSeq Acc Id: NM_001393831   ⟹   NP_001380760
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,779,582 (-)NCBI
mRatBN7.22115,694,868 - 115,851,264 (-)NCBI
RefSeq Acc Id: NM_173152   ⟹   NP_775175
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,685 (-)NCBI
mRatBN7.22115,694,868 - 115,908,365 (-)NCBI
Rnor_6.02119,330,330 - 119,405,809 (-)NCBI
Rnor_5.02138,979,958 - 139,053,451 (-)NCBI
RGSC_v3.42119,130,798 - 119,203,567 (-)RGD
Celera2110,803,018 - 110,875,273 (-)RGD
Sequence:
RefSeq Acc Id: XM_063281409   ⟹   XP_063137479
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281410   ⟹   XP_063137480
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281411   ⟹   XP_063137481
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,777,034 (-)NCBI
RefSeq Acc Id: XM_063281412   ⟹   XP_063137482
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281413   ⟹   XP_063137483
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281415   ⟹   XP_063137485
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281416   ⟹   XP_063137486
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281417   ⟹   XP_063137487
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281418   ⟹   XP_063137488
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281419   ⟹   XP_063137489
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281420   ⟹   XP_063137490
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281421   ⟹   XP_063137491
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281422   ⟹   XP_063137492
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281423   ⟹   XP_063137493
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281424   ⟹   XP_063137494
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281426   ⟹   XP_063137496
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281427   ⟹   XP_063137497
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281428   ⟹   XP_063137498
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281429   ⟹   XP_063137499
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,836,772 (-)NCBI
RefSeq Acc Id: XM_063281430   ⟹   XP_063137500
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,693,582 (-)NCBI
RefSeq Acc Id: XM_063281431   ⟹   XP_063137501
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,693,582 (-)NCBI
RefSeq Acc Id: XM_063281432   ⟹   XP_063137502
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,790,233 (-)NCBI
RefSeq Acc Id: XM_063281433   ⟹   XP_063137503
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,632,884 - 117,790,240 (-)NCBI
RefSeq Acc Id: XM_063281434   ⟹   XP_063137504
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,669,380 (-)NCBI
RefSeq Acc Id: XM_063281435   ⟹   XP_063137505
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,623,199 - 117,663,405 (-)NCBI
RefSeq Acc Id: XM_063281436   ⟹   XP_063137506
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82117,676,539 - 117,790,251 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001380752 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380753 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380754 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380755 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380756 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380757 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380758 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380759 (Get FASTA)   NCBI Sequence Viewer  
  NP_001380760 (Get FASTA)   NCBI Sequence Viewer  
  NP_775175 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137479 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137480 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137481 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137482 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137483 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137485 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137486 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137487 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137488 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137489 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137490 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137491 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137492 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137493 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137494 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137496 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137497 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137498 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137499 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137500 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137501 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137502 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137503 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137504 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137505 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137506 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK38580 (Get FASTA)   NCBI Sequence Viewer  
  EDM01213 (Get FASTA)   NCBI Sequence Viewer  
  EDM01214 (Get FASTA)   NCBI Sequence Viewer  
  EDM01215 (Get FASTA)   NCBI Sequence Viewer  
  EDM01216 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000082985
  ENSRNOP00000086465
  ENSRNOP00000095922
  ENSRNOP00000100252
  ENSRNOP00000102744
  ENSRNOP00000107978
  ENSRNOP00000111871
GenBank Protein Q925N3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_775175   ⟸   NM_173152
- Peptide Label: isoform 1
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6AHT0 (UniProtKB/TrEMBL),   A6IHR6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000015200   ⟸   ENSRNOT00000015200
Ensembl Acc Id: ENSRNOP00000092235   ⟸   ENSRNOT00000105858
Ensembl Acc Id: ENSRNOP00000082985   ⟸   ENSRNOT00000097356
Ensembl Acc Id: ENSRNOP00000087652   ⟸   ENSRNOT00000120122
Ensembl Acc Id: ENSRNOP00000086465   ⟸   ENSRNOT00000107964
Ensembl Acc Id: ENSRNOP00000094453   ⟸   ENSRNOT00000120297
Ensembl Acc Id: ENSRNOP00000094803   ⟸   ENSRNOT00000113164
Ensembl Acc Id: ENSRNOP00000095922   ⟸   ENSRNOT00000098944
RefSeq Acc Id: NP_001380754   ⟸   NM_001393825
- Peptide Label: isoform 4
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6AGZ2 (UniProtKB/TrEMBL),   A6IHR5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380753   ⟸   NM_001393824
- Peptide Label: isoform 3
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001380755   ⟸   NM_001393826
- Peptide Label: isoform 5
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001380752   ⟸   NM_001393823
- Peptide Label: isoform 2
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6AHG5 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380759   ⟸   NM_001393830
- Peptide Label: isoform 9
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001380757   ⟸   NM_001393828
- Peptide Label: isoform 7
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001380758   ⟸   NM_001393829
- Peptide Label: isoform 8
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6A617 (UniProtKB/TrEMBL),   A6IHR7 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380756   ⟸   NM_001393827
- Peptide Label: isoform 6
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6G884 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001380760   ⟸   NM_001393831
- Peptide Label: isoform 6
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6G884 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137499   ⟸   XM_063281429
- Peptide Label: isoform X18
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137494   ⟸   XM_063281424
- Peptide Label: isoform X14
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137491   ⟸   XM_063281421
- Peptide Label: isoform X11
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6B1I9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137490   ⟸   XM_063281420
- Peptide Label: isoform X10
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137496   ⟸   XM_063281426
- Peptide Label: isoform X15
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137487   ⟸   XM_063281417
- Peptide Label: isoform X8
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137485   ⟸   XM_063281415
- Peptide Label: isoform X6
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137502   ⟸   XM_063281432
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063137498   ⟸   XM_063281428
- Peptide Label: isoform X17
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137497   ⟸   XM_063281427
- Peptide Label: isoform X16
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6AMT2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137488   ⟸   XM_063281418
- Peptide Label: isoform X9
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137486   ⟸   XM_063281416
- Peptide Label: isoform X7
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137489   ⟸   XM_063281419
- Peptide Label: isoform X5
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6G884 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137493   ⟸   XM_063281423
- Peptide Label: isoform X13
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6A617 (UniProtKB/TrEMBL),   A6IHR7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137492   ⟸   XM_063281422
- Peptide Label: isoform X12
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137483   ⟸   XM_063281413
- Peptide Label: isoform X5
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot),   A0A8I6G884 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137482   ⟸   XM_063281412
- Peptide Label: isoform X4
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137480   ⟸   XM_063281410
- Peptide Label: isoform X2
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137479   ⟸   XM_063281409
- Peptide Label: isoform X1
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137481   ⟸   XM_063281411
- Peptide Label: isoform X3
- UniProtKB: Q925N3 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063137500   ⟸   XM_063281430
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063137501   ⟸   XM_063281431
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063137504   ⟸   XM_063281434
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063137505   ⟸   XM_063281435
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063137503   ⟸   XM_063281433
- Peptide Label: isoform X20
RefSeq Acc Id: XP_063137506   ⟸   XM_063281436
- Peptide Label: isoform X22
Ensembl Acc Id: ENSRNOP00000100252   ⟸   ENSRNOT00000141428
Ensembl Acc Id: ENSRNOP00000111871   ⟸   ENSRNOT00000147186
Ensembl Acc Id: ENSRNOP00000102744   ⟸   ENSRNOT00000129287
Ensembl Acc Id: ENSRNOP00000107978   ⟸   ENSRNOT00000170544

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q925N3-F1-model_v2 AlphaFold Q925N3 1-602 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:708407 AgrOrtholog
BioCyc Gene G2FUF-53414 BioCyc
Ensembl Genes ENSRNOG00000011211 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000097356 ENTREZGENE
  ENSRNOT00000098944 ENTREZGENE
  ENSRNOT00000107964 ENTREZGENE
  ENSRNOT00000129287 ENTREZGENE
  ENSRNOT00000141428 ENTREZGENE
  ENSRNOT00000147186 ENTREZGENE
  ENSRNOT00000170544 ENTREZGENE
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot
InterPro PTS1R_family UniProtKB/Swiss-Prot
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot
  TPR_repeat UniProtKB/Swiss-Prot
KEGG Report rno:286937 UniProtKB/Swiss-Prot
NCBI Gene 286937 ENTREZGENE
PANTHER PTHR10130 UniProtKB/Swiss-Prot
  PTHR10130:SF1 UniProtKB/Swiss-Prot
Pfam TPR_16 UniProtKB/Swiss-Prot
  TPR_8 UniProtKB/Swiss-Prot
PhenoGen Pex5l PhenoGen
PROSITE TPR UniProtKB/Swiss-Prot
  TPR_REGION UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011211 RatGTEx
SMART TPR UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot
UniProt A0A8I6A617 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AGZ2 ENTREZGENE
  A0A8I6AHG5 ENTREZGENE
  A0A8I6AHT0 ENTREZGENE
  A0A8I6AMT2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6B1I9 ENTREZGENE
  A0A8I6G884 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0KZ03_RAT UniProtKB/TrEMBL
  A0ABK0L253_RAT UniProtKB/TrEMBL
  A0ABK0LBC1_RAT UniProtKB/TrEMBL
  A0ABK0M7M5_RAT UniProtKB/TrEMBL
  A6IHR5 ENTREZGENE, UniProtKB/TrEMBL
  A6IHR6 ENTREZGENE, UniProtKB/TrEMBL
  A6IHR7 ENTREZGENE, UniProtKB/TrEMBL
  F1LMT5_RAT UniProtKB/TrEMBL
  PEX5R_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-25 Pex5l  peroxisomal biogenesis factor 5-like  Pex2  peroxin 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-06 Pex2  peroxin 2  Pex5l  peroxisomal biogenesis factor 5-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2007-12-27 Pex5l  peroxisomal biogenesis factor 5-like  Pex2  peroxin 2  Symbol and Name updated to reflect Human and Mouse nomenclature 1299863 APPROVED
2004-09-10 Pex2  peroxin 2  Trjip8b  TPR-containing Rab8b-interacting protein  Symbol and Name updated 1299863 APPROVED