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Gene: Cxxc4 (CXXC finger protein 4) Rattus norvegicus

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Symbol:

Cxxc4

Name:

CXXC finger protein 4

RGD ID:

69228

Description:

Enables PDZ domain binding activity. Predicted to be involved in negative regulation of Wnt signaling pathway. Predicted to act upstream of or within Wnt signaling pathway. Predicted to be located in cytoplasmic vesicle. Predicted to be active in nucleus. Orthologous to human CXXC4 (CXXC finger protein 4); PARTICIPATES IN Wnt signaling pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

CXXC finger 4; CXXC-type zinc finger protein 4; Dvl-binding protein IDAX (inhibition of the Dvl and Axin complex); Idax; inhibition of the Dvl and axin complex protein; inhibitor of the Dvl and Axin complex

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CXXC4 (CXXC finger protein 4)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Cxxc4 (CXXC finger 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cxxc4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CXXC4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CXXC4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101958361 (uncharacterized LOC101958361)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CXXC4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CXXC4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cxxc4 (CXXC finger protein 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Cxxc4 (CXXC finger 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CXXC4 (CXXC finger protein 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cxxc4 (CXXC finger 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cxxc4	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)

Candidate Gene For:

Eau5

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	225,329,044 - 225,363,347 (+)	NCBI		GRCr8
mRatBN7.2	2	222,664,148 - 222,689,365 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	222,664,771 - 222,689,365 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	230,361,717 - 230,386,485 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	228,261,412 - 228,286,180 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	223,126,229 - 223,150,995 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	239,414,882 - 239,439,640 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	239,415,046 - 239,439,568 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	257,941,014 - 257,965,727 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	231,705,560 - 231,722,975 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	231,692,299 - 231,709,701 (+)	NCBI
Celera	2	214,887,130 - 214,911,824 (+)	NCBI		Celera
Cytogenetic Map	2	q43	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxxc4	Rat	1,2-dichloroethane	decreases expression	ISO	Cxxc4 (Mus musculus)	6480464	ethylene dichloride results in decreased expression of CXXC4 mRNA	CTD	PMID:28960355
Cxxc4	Rat	1-naphthyl isothiocyanate	decreases expression	EXP		6480464	1-Naphthylisothiocyanate results in decreased expression of CXXC4 mRNA	CTD	PMID:30723492
Cxxc4	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	EXP		6480464	Tetrachlorodibenzodioxin results in increased expression of CXXC4 mRNA	CTD	PMID:32109520
Cxxc4	Rat	3,4-methylenedioxymethamphetamine	increases expression	ISO	Cxxc4 (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of CXXC4 mRNA	CTD	PMID:19285098
Cxxc4	Rat	3,4-methylenedioxymethamphetamine	decreases expression	EXP		6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of CXXC4 mRNA	CTD	PMID:30071829
Cxxc4	Rat	5-aza-2'-deoxycytidine	decreases expression	ISO	Cxxc4 (Mus musculus)	6480464	Decitabine results in decreased expression of CXXC4 mRNA	CTD	PMID:27915011
Cxxc4	Rat	6-propyl-2-thiouracil	increases expression	EXP		6480464	Propylthiouracil results in increased expression of CXXC4 mRNA	CTD	PMID:24780913
Cxxc4	Rat	acrolein	decreases expression	EXP		6480464	Acrolein results in decreased expression of CXXC4 mRNA	CTD	PMID:38090360
Cxxc4	Rat	acrylamide	increases expression	ISO	Cxxc4 (Mus musculus)	6480464	Acrylamide results in increased expression of CXXC4 mRNA	CTD	PMID:30807115
Cxxc4	Rat	aflatoxin B1	decreases methylation	ISO	CXXC4 (Homo sapiens)	6480464	Aflatoxin B1 results in decreased methylation of CXXC4 gene	CTD	PMID:27153756
Cxxc4	Rat	alpha-Zearalanol	multiple interactions	EXP		6480464	[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of CXXC4 mRNA	CTD	PMID:35163327
Cxxc4	Rat	ammonium chloride	affects expression	EXP		6480464	Ammonium Chloride affects the expression of CXXC4 mRNA	CTD	PMID:16483693
Cxxc4	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of CXXC4 mRNA	CTD	PMID:25181051
Cxxc4	Rat	bisphenol A	increases expression	ISO	CXXC4 (Homo sapiens)	6480464	bisphenol A results in increased expression of CXXC4 mRNA	CTD	PMID:36232920
Cxxc4	Rat	bisphenol A	decreases expression	ISO	Cxxc4 (Mus musculus)	6480464	bisphenol A results in decreased expression of CXXC4 mRNA	CTD	PMID:32156529
Cxxc4	Rat	camptothecin	increases expression	ISO	CXXC4 (Homo sapiens)	6480464	Camptothecin results in increased expression of CXXC4 mRNA	CTD	PMID:38460933
Cxxc4	Rat	cefaloridine	decreases expression	EXP		6480464	Cephaloridine results in decreased expression of CXXC4 mRNA	CTD	PMID:18500788
Cxxc4	Rat	chlordecone	increases expression	ISO	Cxxc4 (Mus musculus)	6480464	Chlordecone results in increased expression of CXXC4 mRNA	CTD	PMID:33711761
Cxxc4	Rat	dimethyl sulfoxide	affects expression	ISO	CXXC4 (Homo sapiens)	6480464	Dimethyl Sulfoxide affects the expression of CXXC4 mRNA	CTD	PMID:24834073
Cxxc4	Rat	dorsomorphin	multiple interactions	ISO	CXXC4 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CXXC4 mRNA	CTD	PMID:27188386
Cxxc4	Rat	endosulfan	decreases expression	EXP		6480464	Endosulfan results in decreased expression of CXXC4 mRNA	CTD	PMID:29391264
Cxxc4	Rat	entinostat	multiple interactions	ISO	CXXC4 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CXXC4 mRNA	CTD	PMID:27188386
Cxxc4	Rat	entinostat	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	entinostat results in decreased expression of CXXC4 mRNA	CTD	PMID:26272509
Cxxc4	Rat	ethanol	affects expression	ISO	Cxxc4 (Mus musculus)	6480464	Ethanol affects the expression of CXXC4 mRNA	CTD	PMID:30319688
Cxxc4	Rat	glyphosate	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	Glyphosate results in decreased expression of CXXC4 mRNA	CTD	PMID:31295307
Cxxc4	Rat	ketamine	decreases expression	EXP		6480464	Ketamine results in decreased expression of CXXC4 mRNA	CTD	PMID:20080153
Cxxc4	Rat	Licochalcone B	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	licochalcone B results in decreased expression of CXXC4 mRNA	CTD	PMID:33647349
Cxxc4	Rat	methylmercury chloride	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	methylmercuric chloride results in decreased expression of CXXC4 mRNA	CTD	PMID:28001369
Cxxc4	Rat	Monobutylphthalate	increases expression	EXP		6480464	monobutyl phthalate results in increased expression of CXXC4 mRNA	CTD	PMID:29162477
Cxxc4	Rat	O-methyleugenol	increases expression	ISO	CXXC4 (Homo sapiens)	6480464	methyleugenol results in increased expression of CXXC4 mRNA	CTD	PMID:32234424
Cxxc4	Rat	perfluorooctanoic acid	multiple interactions	EXP		6480464	[Zeranol co-treated with perfluorooctanoic acid] results in decreased expression of CXXC4 mRNA	CTD	PMID:35163327
Cxxc4	Rat	perfluorooctanoic acid	decreases expression	EXP		6480464	perfluorooctanoic acid results in decreased expression of CXXC4 mRNA	CTD	PMID:35163327
Cxxc4	Rat	phenylephrine	decreases expression	EXP		6480464	Phenylephrine results in decreased expression of CXXC4 mRNA	CTD	PMID:18158353
Cxxc4	Rat	rotenone	decreases expression	EXP		6480464	Rotenone results in decreased expression of CXXC4 mRNA	CTD	PMID:19013527
Cxxc4	Rat	SB 431542	multiple interactions	ISO	CXXC4 (Homo sapiens)	6480464	[NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of CXXC4 mRNA	CTD	PMID:27188386
Cxxc4	Rat	silicon dioxide	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	Silicon Dioxide analog results in decreased expression of CXXC4 mRNA	CTD	PMID:23806026 and PMID:25895662
Cxxc4	Rat	sunitinib	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	Sunitinib results in decreased expression of CXXC4 mRNA	CTD	PMID:31533062
Cxxc4	Rat	testosterone	decreases expression	ISO	Cxxc4 (Mus musculus)	6480464	Testosterone deficiency results in decreased expression of CXXC4 mRNA	CTD	PMID:33848595
Cxxc4	Rat	titanium dioxide	decreases methylation	ISO	Cxxc4 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of CXXC4 promoter	CTD	PMID:35295148
Cxxc4	Rat	trichloroethene	decreases expression	EXP		6480464	Trichloroethylene results in decreased expression of CXXC4 mRNA	CTD	PMID:33387578
Cxxc4	Rat	valproic acid	increases expression	ISO	CXXC4 (Homo sapiens)	6480464	Valproic Acid results in increased expression of CXXC4 mRNA	CTD	PMID:19101580
Cxxc4	Rat	valproic acid	decreases methylation	ISO	CXXC4 (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of CXXC4 gene	CTD	PMID:29154799
Cxxc4	Rat	valproic acid	decreases expression	ISO	CXXC4 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of CXXC4 mRNA	CTD	PMID:23179753
Cxxc4	Rat	venlafaxine hydrochloride	increases expression	EXP		6480464	Venlafaxine Hydrochloride results in increased expression of CXXC4 mRNA	CTD	PMID:25423262

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxxc4	Rat	biological_process		ND		1598407	02/2009: no relevant rat data	RGD
Cxxc4	Rat	negative regulation of Wnt signaling pathway	involved_in	ISO	CXXC4 (Homo sapiens)	1624291	PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	Wnt signaling pathway	acts_upstream_of_or_within	ISO	Cxxc4 (Mus musculus)	1624291	PR:P51141 PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	Wnt signaling pathway	involved_in	IEA	UniProtKB-KW:KW-0879	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxxc4	Rat	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Cxxc4	Rat	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Cxxc4	Rat	cytoplasm	located_in	ISO	Cxxc4 (Mus musculus)	1624291	PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	cytoplasm	located_in	ISO	CXXC4 (Homo sapiens)	1624291	PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	cytoplasmic vesicle	located_in	ISO	CXXC4 (Homo sapiens)	1624291	PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	cytoplasmic vesicle	located_in	ISO	Cxxc4 (Mus musculus)	1624291	PMID:11113207	RGD	PMID:11113207
Cxxc4	Rat	cytosol	located_in	TAS		1600115	Reactome:R-NUL-5368583	Reactome	Reactome:R-NUL-5368583
Cxxc4	Rat	nucleus	is_active_in	IBA	MGI:2442112 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cxxc4	Rat	nucleus	located_in	ISO	Cxxc4 (Mus musculus)	1624291	PMID:23690950	RGD	PMID:23690950

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxxc4	Rat	DNA binding	enables	IEA	InterPro:IPR002857	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Cxxc4	Rat	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Cxxc4	Rat	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Cxxc4	Rat	methyl-CpG binding	enables	ISS	UniProtKB:Q9H2H0	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Cxxc4	Rat	methyl-CpG binding	enables	IBA	PANTHER:PTN000334626 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Cxxc4	Rat	methyl-CpG binding	enables	ISO	CXXC4 (Homo sapiens)	1624291	PMID:29276034	RGD	PMID:29276034
Cxxc4	Rat	PDZ domain binding		IPI	Dvl1 (Mus musculus)	2303370		RGD
Cxxc4	Rat	PDZ domain binding	enables	ISO	CXXC4 (Homo sapiens)	1624291	UniProtKB:O14640 more ...	RGD	PMID:11113207
Cxxc4	Rat	PDZ domain binding	enables	IPI	UniProtKB:O14640	68802	PMID:11113207	BHF-UCL
Cxxc4	Rat	protein binding	enables	IPI	UniProtKB:O14640	68802	PMID:11113207	IntAct
Cxxc4	Rat	protein binding	enables	ISO	Cxxc4 (Mus musculus)	1624291	PR:Q8BG87 PMID:23690950	RGD	PMID:23690950
Cxxc4	Rat	zinc ion binding	enables	ISS	UniProtKB:Q9H2H0	1600115	GO_REF:0000024	UniProt	GO_REF:0000024
Cxxc4	Rat	zinc ion binding	enables	ISO	CXXC4 (Homo sapiens)	1624291	PMID:29276034	RGD	PMID:29276034
Cxxc4	Rat	zinc ion binding	enables	IEA	UniProtKB-KW:KW-0863	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Cxxc4	Rat	zinc ion binding	enables	IEA	InterPro:IPR002857	1600115	GO_REF:0000002	InterPro	GO_REF:0000002

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Cxxc4	Rat	Wnt signaling pathway		IEA		6907045		KEGG	rno:04310

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Inhibition of the Wnt signaling pathway by Idax, a novel Dvl-binding protein.	Hino S, etal., Mol Cell Biol 2001 Jan;21(1):330-42.
4.	Interaction between the internal motif KTXXXI of Idax and mDvl PDZ domain.	London TB, etal., Biochem Biophys Res Commun. 2004 Sep 10;322(1):326-32.
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
7.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
8.	GOA pipeline	RGD automated data pipeline
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
10.	Comprehensive gene review and curation	RGD comprehensive gene curation
11.	Tentative Sequence Identification Numbers	Tentative Sequence Data IDs. TIGR Gene Index, Rat Data

PMID:23690950	PMID:29276034	PMID:32280999

Cxxc4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	225,329,044 - 225,363,347 (+)	NCBI		GRCr8
mRatBN7.2	2	222,664,148 - 222,689,365 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	222,664,771 - 222,689,365 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	230,361,717 - 230,386,485 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	228,261,412 - 228,286,180 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	223,126,229 - 223,150,995 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	239,414,882 - 239,439,640 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	239,415,046 - 239,439,568 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	257,941,014 - 257,965,727 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	231,705,560 - 231,722,975 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	231,692,299 - 231,709,701 (+)	NCBI
Celera	2	214,887,130 - 214,911,824 (+)	NCBI		Celera
Cytogenetic Map	2	q43	NCBI

CXXC4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	104,468,308 - 104,494,894 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	104,468,308 - 104,494,901 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	105,389,465 - 105,416,051 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	105,612,779 - 105,631,916 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	105,750,948 - 105,770,071	NCBI
Celera	4	102,691,446 - 102,710,586 (-)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI
HuRef	4	101,124,739 - 101,151,300 (-)	NCBI		HuRef
CHM1_1	4	105,366,304 - 105,392,872 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	107,779,515 - 107,806,100 (-)	NCBI		T2T-CHM13v2.0

Cxxc4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	133,938,927 - 133,967,924 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	133,942,245 - 133,967,922 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	134,236,144 - 134,262,163 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	134,236,484 - 134,262,161 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	133,903,112 - 133,925,125 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	134,177,032 - 134,199,477 (+)	NCBI		MGSCv36	mm8
Celera	3	140,656,700 - 140,678,444 (+)	NCBI		Celera
Cytogenetic Map	3	G3	NCBI
cM Map	3	62.12	NCBI

Cxxc4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955496	4,523,027 - 4,546,671 (+)	NCBI	ChiLan1.0	ChiLan1.0

CXXC4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	102,551,565 - 102,578,300 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	102,843,934 - 102,870,658 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	96,931,261 - 96,957,973 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	107,568,738 - 107,627,055 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

CXXC4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	32	25,469,736 - 25,492,226 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	32	25,473,758 - 25,492,262 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	32	16,532,739 - 16,555,823 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	32	25,679,514 - 25,701,609 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	32	25,681,895 - 25,712,769 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	32	25,700,838 - 25,723,930 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	32	25,442,770 - 25,465,858 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	32	14,394,495 - 14,417,610 (+)	NCBI		UU_Cfam_GSD_1.0

LOC101958361
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	15,754,153 - 15,757,349 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936752	1,167,273 - 1,189,879 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936752	1,163,832 - 1,186,227 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CXXC4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	117,100,633 - 117,121,034 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	117,094,442 - 117,124,943 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	125,972,942 - 125,994,265 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CXXC4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	52,531,641 - 52,551,289 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666037	31,119,047 - 31,145,548 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cxxc4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624830	4,092,850 - 4,115,959 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624830	4,090,207 - 4,116,080 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Cxxc4
119 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	608
Count of miRNA genes:	279
Interacting mature miRNAs:	353
Transcripts:	ENSRNOT00000072196
Prediction methods:	Microtar, Miranda
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331734	Bp204	Blood pressure QTL 204	3.61192		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	168358098	223265385	Rat
2301408	Kidm36	Kidney mass QTL 36		0.002	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	2	190613715	226808892	Rat
1598813	Memor9	Memory QTL 9	2.7		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	2	199341726	234244620	Rat
8693697	Alc36	Alcohol consumption QTL 36	2	0.592	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	2	217139753	236660713	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	141194931	223265385	Rat
1298075	Scl17	Serum cholesterol level QTL 17	3.4		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	2	211744537	249053267	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	2	141194931	223265385	Rat
1354648	Bp239	Blood pressure QTL 239		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	66118463	226797303	Rat
2298479	Eau5	Experimental allergic uveoretinitis QTL 5		0.0021	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	2	202446871	237938339	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	2	81754530	227146641	Rat
1300126	Bp175	Blood pressure QTL 175	3.46		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	2	214226044	247136170	Rat
10755499	Bp389	Blood pressure QTL 389	2.61		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	2	18960362	228801039	Rat
7207484	Bss108	Bone structure and strength QTL 108	5.3		femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	2	211744537	249053267	Rat
2313073	Bmd75	Bone mineral density QTL 75	4.1	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	2	215377404	237938339	Rat
738013	Alc15	Alcohol consumption QTL 15	4.1	0.00022	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	2	184165752	229165752	Rat
61398	Bp50	Blood pressure QTL 50	4.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	189599258	234599258	Rat
7207482	Bss107	Bone structure and strength QTL 107	7		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	2	211744537	249053267	Rat
2317752	Glom23	Glomerulus QTL 23	3.6		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	2	193452645	245889826	Rat
1549836	Bss2	Bone structure and strength QTL 2	7.5		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	2	211744537	249053267	Rat
2317885	Alcrsp28	Alcohol response QTL 28	2.1	0.63	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	212828222	249053267	Rat
1581499	Esta2	Estrogen-induced thymic atrophy QTL 2			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	2	189599258	226936289	Rat
1331767	Hrtrt12	Heart rate QTL 12	3.373		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	218414747	240841241	Rat
9589044	Scfw1	Subcutaneous fat weight QTL 1	5.8	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	2	182171407	227171407	Rat
8694435	Bw166	Body weight QTL 166	14.08	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	2	182171407	227171407	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		joint integrity trait (VT:0010548)	experimental arthritis severity measurement (CMO:0001459)	2	179946951	224946951	Rat
2293833	Kiddil8	Kidney dilation QTL 8	2.9		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	219753301	247136170	Rat
8694383	Bw158	Body weight QTL 158	7.69	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	2	182171407	227171407	Rat
1598835	Anxrr18	Anxiety related response QTL 18	2.98		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	2	200990457	245990457	Rat
7207490	Bss111	Bone structure and strength QTL 111	6.4		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	2	211744537	249053267	Rat
8693622	Alc26	Alcohol consumption QTL 26	2.4	0.667	drinking behavior trait (VT:0001422)	calculated ethanol drink intake rate (CMO:0001615)	2	221136523	241305619	Rat
2306901	Bp337	Blood pressure QTL 337		0.01	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	2	164073756	227146641	Rat
8694194	Abfw1	Abdominal fat weight QTL 1	11.7	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	2	182171407	227171407	Rat
61366	Iddm3	Insulin dependent diabetes mellitus QTL 3	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	2	189599258	234599258	Rat
2293844	Kiddil7	Kidney dilation QTL 7	3.5		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	2	219753301	247136170	Rat
1641891	Alcrsp17	Alcohol response QTL 17			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	2	149559561	249053267	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	2	78665619	249053267	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	2	179335906	224335906	Rat
8662843	Vetf9	Vascular elastic tissue fragility QTL 9	2.05		thoracic aorta molecular composition trait (VT:0010568)	aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)	2	157142078	226277316	Rat
1359019	Hrtrt19	Heart rate QTL 19	2.9		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	2	219753301	226277316	Rat

RH134190

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	222,689,023 - 222,689,238 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	239,439,299 - 239,439,513	NCBI	Rnor6.0
Rnor_5.0	2	257,965,458 - 257,965,672	UniSTS	Rnor5.0
RGSC_v3.4	2	231,726,499 - 231,726,713	UniSTS	RGSC3.4
Celera	2	214,911,483 - 214,911,697	UniSTS
Cytogenetic Map	2	q43	UniSTS

RH140132

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	2	222,669,355 - 222,669,553 (+)	MAPPER	mRatBN7.2
Rnor_6.0	2	239,419,631 - 239,419,828	NCBI	Rnor6.0
Rnor_5.0	2	257,945,790 - 257,945,987	UniSTS	Rnor5.0
RGSC_v3.4	2	231,706,831 - 231,707,028	UniSTS	RGSC3.4
Celera	2	214,891,837 - 214,892,034	UniSTS
RH 3.4 Map	2	1559.5	UniSTS
Cytogenetic Map	2	q43	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	59	31


RefSeq Transcripts	NM_053342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006233341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008761531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF272158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473952	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000072196 ⟹ ENSRNOP00000067828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	2	222,664,771 - 222,689,365 (+)	Ensembl
Rnor_6.0 Ensembl	2	239,415,046 - 239,439,568 (+)	Ensembl

RefSeq Acc Id:

NM_053342 ⟹ NP_445794

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	225,338,589 - 225,363,347 (+)	NCBI
mRatBN7.2	2	222,664,607 - 222,689,365 (+)	NCBI
Rnor_6.0	2	239,414,882 - 239,439,640 (+)	NCBI
Rnor_5.0	2	257,941,014 - 257,965,727 (+)	NCBI
RGSC_v3.4	2	231,705,560 - 231,722,975 (+)	RGD
Celera	2	214,887,130 - 214,911,824 (+)	NCBI

Sequence:

show sequence

CTCCTCCTCCTCTCTGCAACAAGAAAAAAAAGCCATTTACAGGGGGTGATGTGCAACTAATTAAAGGCAGACTGGCAGCGTCTGCAAATTCTAAGGCTCCCCAAATAAAAAGAGACTGTTGTAACAGT
TGGAGGATAATGCAAAGGAAGACGCTGCCTGGGAATTCACCGTCTGTGGACATGCGCCCCAGAGAGGACTAGAGCAGCCCTCACCTTGCTCTCCCCACCCGGATCCCACTTTCCTGCACGGCTCGGCC
CGTACCCCGACCCCACCATCACCCGCTTCCCTTCCCCCCACCTCTCCCCCTTTCCCACCCAGGTGTCGGACCAGGCGGTCCCCACTTCCACCCTGCACCCCTTCTTCCCCCCCTGCACCATGAACACC
AATGTCTGCGTGGAGCCGGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAGAGCCACCTGCCCGAGGGGGCCCTGAACAGCCTTGTGGATTACAACTCTGAGATGGAGCGCTATCGCTCTTTTGC
CACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGCAGGCAGCCAAGATCGCGCGCATCACCACCCCCATCTTCCCCAGCAGCGCCGCCGCCGCCGCGGCTGCTGCGCGCATCGGCATGTCCCCGT
GGAACTGCGACAACGCGGCCACCGCCGCCGCCACCGCGATGCTCTGGGGCAGCGGGGGCGGCGGCGGAGGCGGTGGGGGCGGGGGTGGGGGCGGCGGAGCCGGCAGGAAATCCTCCTCGGCCGCCGCC
TCCTCCTCCACCTCCTCCTCGGCGATCCTCCCCGCCGCCGGCGGTGGCGGTGGCGGCGGCGGCAGTGGCAGCGGCGGCGGCGGCGGCGGTGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTC
CCAGCGTCTGGGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTCTCCACCTTATCCCCCGAACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAAT
GCGGCGCTGCTGAAGCAGAGATAATGAATCTCCCCGAGCGGGTGGGGACTTTTTCCGCTATCCCGGCTTTAGGGGGCATCTCATTACCTCCAGGGGTCATCGTCATGACAGCCCTTCACTCCCCCGCA
GCAGCCTCAGCAGCCGTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTCGTCCTCCTCGGGGGGAGCTGGCGGAGCCAACCCGGCCAAGAAGAA
GAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTGTGGCGTCTGCAGCAGTTGCAGGAACCGCAAAACGGGACACCAGATCTGCAAATTTAGAAAATGTGAAGAGCTAAAGAAAA
AACCTGGCACTTCGCTAGAGAGAACACCTGTTCCCAGCGCTGAAGCATTCCGATGGTTCTTTTAAAGCTGTAGTGTACCTTATTTTCAAGGCATTTGGAAATGAAGGGCAAACTAATGTCTTGTTTTA
AGAAACCACTTAGTCCACCATTGAAGAAATTATCCAGAAATTATTTTCATTTTATGTATAGGGATTTCTTCAAAAAAAAAAAAAACCAAGAGGAAAAGAAATCAACAACAACAACAACAACAACAACA
ACAAGACACATAAAAATAAGAGGGAAGCTTGGGGATTGGCCGGTTTATTTACGTTCAATACACTGATTCTTCCTTTGATGTATCTAGCTATACTAGTGAAGCTGTTGTCTATTTTGAAAGTGGCTGTA
AAAAAAAATAAGTTTGGGTAACCCCCGACTGTAAAATGATGTATCTTTGCAAAGTACATATCTATACGTCATTTTCATATATATGTGTTCCAGTACCGTAAACTGTACAGACAGCGGCTTGTATTTTG
TGTGTTTAGACACAAGGAGACAATCAGGTCTGAGCAACTATGGAGATTAACGGTTTGTACACAAAACTATGGTTCTGCAAGTTAAAAAATCCGGAGCAATAAATTTTAGCTTTAAATATATATATATA
TTTTTTGCCAGTTGTTTTTAGGAGCAGAAACAACACCGGTGGTTTTCATGCATCCTTCTGTAGAGACTTGTTGGCTGGTTTTTACGAGACGAAAAGATTAGCCCTGCATCCAGCAATTACCTTCAGTT
GTGTTGATATGAGAGGGAAAGCTACTAGGAAGGTTTCCATTAATCTTTTGAGCACTATATTAGAGTAGTGGTTATGCATTTGCATTGCTTACAGACGAGCTGTACAGAGGGTCTACCTCCCAATATTT
AGTGTAGTTGACTTGTTTGGGTTGCACTGTAAGGGAGTACGCTGAATAGTTGGAAAATGCAGAATCAGTTGTATCTTTTTTTTTTTTTTAAATTGGAAAAGCGTGTTCTAGGCTAACGATATCCGATC
ATAGAAAGAGAAATTCATGCCTGACTCCACTTTTTTTCCCCCTCCTAGCCGTACACAGGTTGTTCAAGCTTTTTTATTCTTATTTTTTTTTGCTTCGGGGAGGGGTAGAAAAAAATAAAAACAAAAAC
AGAAGAGTATTCAAAATGTTTTAATTCCATGTGTGGCGTTGAATGGGTAGGTTTCAAACAATACTCAAATGCATTGAAGCCTACTTTAAGGCTTGGTTGGGCTTATTTTCAAGTTCAAAATAATTAAA
CACATTCATTAAAAGTGGGACCTTTTTGTTTCTTTACCTTCCCTTCCTCAGTCTCTCAGTGGGACACCTACTGCTTCCATTCCCTTTCTTACCACTGGAAGCTTTCTTTTCATGAAGCAAGGCCACAT
TGTAAGGAATTTCATAAAAAAAAAAAACCAACACAGCCCATCTGCCCCCCAGGATGCTTTATAGAACCCGGGCTGCGTTACTCGGTAAGGTTTGATTTTCCTAGGACTGTCATGCTTCTCAAATGATG
CCTGTCCCAATAAGACAAACACTTTCATTGATTTATTTTTAAGACTAGCCTAAACGAACCAGTTTCAGGAATAAAACATAGTTTAGGAAAGACACGTAGAATAACAAAGTTGCCATGTTAAATTACAT
CTCCGTTTTTTATGCCTGTCAGACAGGTTAGCAAGATGGGTGAGAAGGAAAACAACAGCAGAGTGATAAGTCAGCGAGGACTTTAGAGTCTAAAGAGCTTCAAAGGCTGGTTGGGGAATATTTTTTAA
ATCTCATTTTAGATTTAAGTGGAGGAGGGATGACATTATTTTTTTTCCAAAGGCAGGTCAGGTACGCCATCATTGGTCACCTGGATGAGAGCATAGTAGGTTTGTATGATGCCAGTGTAGGGTACCAG
CGGGATGGATGAGCCTAGCTAGCAGACCAGTGCTGAGTCTGCAGTATGGTCAAGCAGCCTGTGAGGAAAACGCTTTATGTATCACACCTGCCCGGGCTTAAAGAGAGGAATGAGCTCATCAAAAAGTA
AAATGCGCTGTATATTACTTTCGAGATAGCTTTCTACTCCATGTGTATCCCTTAGAGTGTTCGTAGCTATAATTTCTGTTTCTGCTGTAGGACCAATGAGAGGTATATGAGTTCTCTATTGCTTTATA
TCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAATTTTTATTTTACTTTATTCTTATTTTGGACAATTTGTTAGTGAACTATGAGTATGCAAAAATTTATTTTCACACTTGAATGGGACTTC
CCTTGCTATTGTAAAAAAATGATTATAAAACTTTTCTTCAGGCTGTATTAGGCACACCATAAGGACATCATAGCAATATATGGAAAGTCAAAAACTCAAGGTGGCGTTGCATGTCCTGATGTATTTTT
TTGTTTGTTTGTTTCATGGTTTTTGTTTTAAGACAATGAATCTGGGTATTGTAAATGTGTCGTTTCACATGGCAGTTCATTTATTTTTAGTGAAAGGAATGTTTGTCACCATGATGAACAGTGTGGCC
TTTCTTTTTTTAAAAAAATATTTTCTTACATTTTCATTATTGACATTATTTTCATTATGCCACACTCTTCTTATATTTCCCTTTAAACCCAATTTACAAAATGTAGGGTACAGATAGAGTTCTCACTG
GTGATGGTGAAGAAATTACCCTTCTAGATTCCCTCTAGTTTTCATTCTCAAGTATCTACGTACCAACAACTTGTAGCCTTAAGTCAGTGAAGGTGTGCTTGTGTATTTTTTCTCTATTCCAAAATAGA
AATGAAACGTAACTCTTAACAGCTTGCTCACTGAGTGTCTCGTTTTCCATATCAATAAAATTTAGAATTTAGCAATCAGACTGTAGGTTGTATATATACAACTTAAAAATTACACACTGGTGTTTCTA
AAGCTGCTAGAGAAGTCCGCACACAGGAATCCAGTCTTCAGCAGATGCATTCCCTGGCAGCATTTGAGGGGAGTACAGGAGGATACGTGGACCACTGGCATACAGGATGTCCAACAGATGCTCCCTTT
AGCTCTCCAGAAGACCAAATACTGTAATGCAGACCTCCGTCTTTATTGACCTTTCAGACTAAAGTGACTTTCTGTTGGACTCCTCTTGCCTTCATACAAGCAGAGGCACAACACGCTCACAAAGTAGT
ACTGAATCCATCCAAGTTCCATAAACAATAAACATCTTCCCCTGACGTATGAATATATAAAACGTCTCCTGTTTGCTTACCCCCAAACCTTCCCTTTCAGACTAAGCAGTCACAGGGAGTGATAGGCA
ACAAGGTTGTTATGAATTAATATTAAGTAATCATGAAAGGAACGGAATGTCCCATCCTTTGTCAGAACCCCTGGCATGGATGTTGTTCAATTAGTGCTGGAGCCTAGAAAGCTCTTAAGCTGATAGTA
TCAGTAATCAAAGAGTGAAAAGAGAGACACAGTTAAATGGGGCACAATTCAGGGTCAAATATGTTGAGCAGAGAGCTGTAGTGGGTCTTTGATCATGGCGAGATTCACGGCGAGATCCAACAGCTGGT
TCTCGTGTAGCAGCTAAATGTTTCAGATTTTGTTTTTTATTAAATTTGGCATTTCACACTGAGATCTGTATTCCTAGCGAGTAAAACACAGCTACTGTGTTCAGAAGGATTCCGTTCCACAATTGACA
AGCAGACATTTCAGGACATGGGCCACCAAGTGTACTCCGTTCCCAGCGTCCTCCCATTCTGAACTGTGCAGTTATCGGTTACATTTTCTAATAGATATTTGTGTAAAGGTGTATGTAAGCTTGTGCAG
TTATTTTAAAAAGCAGTTTTGGAAAAACAGTGTATTTATTAAAGAAAAATCACTTATGGGGCATGTACAAAACTGTAAAAAGAAATTAAAAACCACTTCAATTTGCCCAGTAAAGTTGTTTTTGTGAA
ATTTCTGTGTTGTTAAATAAAGGACTTTAGTATTCAAAGTATCTCCATTTTTCCATGGCAAAATTTTATTTGTGGGATTTAAATTAATAAACACAGTTCTGAAAATCTAA

hide sequence

RefSeq Acc Id:

XM_006233339 ⟹ XP_006233401

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	225,329,044 - 225,346,737 (+)	NCBI
mRatBN7.2	2	222,664,148 - 222,678,554 (+)	NCBI
Rnor_6.0	2	239,414,882 - 239,428,829 (+)	NCBI
Rnor_5.0	2	257,941,014 - 257,965,727 (+)	NCBI

Sequence:

show sequence

CTCCTCCTCCTCTCTGCAACAAGAAAAAAAAGCCATTTACAGGGGGTGATGTGCAACTAATTAAAGGCAGACTGGCAGCGTCTGCAAATTCTAAGGCTCCCCAAATAAAAAGAGACTGTTGTAACAGT
TGGAGGATAATGCAAAGGAAGACGCTGCCTGGGAATTCACCGTCTGTGGACATGCGCCCCAGAGAGGACTAGAGCAGCCCTCACCTTGCTCTCCCCACCCGGATCCCACTTTCCTGCACGGCTCGGCC
CGTACCCCGACCCCACCATCACCCGCTTCCCTTCCCCCCACCTCTCCCCCTTTCCCACCCAGGTGTCGGACCAGGCGGTCCCCACTTCCACCCTGCACCCCTTCTTCCCCCCCTGCACCATGAACACC
AATGTCTGCGTGGAGCCGGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAGAGCCACCTGCCCGAGGGGGCCCTGAACAGCCTTGTGGATTACAACTCTGAGATGGAGCGCTATCGCTCTTTTGC
CACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGCAGGCAGCCAAGATCGCGCGCATCACCACCCCCATCTTCCCCAGCAGCGCCGCCGCCGCCGCGGCTGCTGCGCGCATCGGCATGTCCCCGT
GGAACTGCGACAACGCGGCCACCGCCGCCGCCACCGCGATGCTCTGGGGCAGCGGGGGCGGCGGCGGAGGCGGTGGGGGCGGGGGTGGGGGCGGCGGAGCCGGCAGGAAATCCTCCTCGGCCGCCGCC
TCCTCCTCCACCTCCTCCTCGGCGATCCTCCCCGCCGCCGGCGGTGGCGGTGGCGGCGGCGGCAGTGGCAGCGGCGGCGGCGGCGGCGGTGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTC
CCAGCGTCTGGGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTCTCCACCTTATCCCCCGAACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAAT
GCGGCGCTGCTGAAGCAGAGATAATGAATCTCCCCGAGCGGGTGGGGACTTTTTCCGCTATCCCGGCTTTAGGGGGCATCTCATTACCTCCAGGGGTCATCGTCATGACAGCCCTTCACTCCCCCGCA
GCAGCCTCAGCAGCCGTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTCGTCCTCCTCGGGGGGAGCTGGCGGAGCCAACCCGGCCAAGAAGAA
GAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTGTGGCGTCTGCAGCAGTTGCAGGAACCGCAAAACGGGACACCAGATCTGCAAATTTAGAAAATGTGAAGAGCTAAAGAAAA
AACCTGGCACTTCGCTAGAGGTCAGAGGAGATGATTTCTTGTTTCCCAGTCTTGCCCCCTCCCTCCTCACCCCCCTGCCCTCTCCCCCACAGGGTTTCTTGTCTGGATTCAAGACGCAGCATCCCCTT
TTCTGAAGCTTCTTGCAGGCTGAAACATACTGGCATGGGTGGTTGGCGGAGGACTTGGCCTCAATACCACCCTCTCAGCTGCACTTCAGTCGGGACCGCCCTTCGGCTAGAGAGTGCCCCTCCTTTTT
TAGTCTCTGGAAAAAAAGGCAATTGGTCTAAGAACCCGAAGTTTTGCATCTGAGTATGCTTAATATTTTCCCTGCTGTTTTAAACTGGTCCATCAGGAAAACATCCAAACAAAAAGCTCTGCCCCAAA
TATTGAACATATTTATCATTCATATATATATACATATATGTATGTATATATATATATATATATATATATATATATATGGACTTAGTATAGCCCAGACATAACACTACTCATGTTGTACACAACTTAAA
GTATACGCATACATATGTATATATACCATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCATGTGTGGGCTGAATTGCCTGGATTCCAAAGGGGATTTTTATCCTCTTCTA
GAATAATTTTCTTCTGAGCCTAACAGGATGTTTTTTGTTTCCTGTCTTTTTTTTTTTTTTTTTTTTTTTGCCTTCCTGATAATTTTTGAGCCAGCAGAGAGAGTGTAGGGAGCTGCTAGTCACATTTT
TGAGATGTGACTTTGAGTAAAATGATAATTATTTACTAATGTGACCTAACGGGGAGCTTATTTTTAAAATAATTTACGTAGTTCCAGGAAAACTCGGTTGTTTTGTTGTTGTTTTAGATTTTACATCT
CCCTTGGGTTCAGCATCTGACAAAGTAACCATTTTGTGGTTGCAAAATTACTCTAAACATAGGAAGGCTTTGGTCGGTGCCATATGTGGTAAATGATAGTTTACTTTTCCTATAGGTCTTTAAAACAG
ACATTATTCACTAAAGTAATGGTAACATTAGGCTTTTAATTGCATTTTAAATTAATATTGATACATGGGACGAACATTTTATATGATAGCCTAATCAAAACACAGGAGGAAAAAATGCAAAATTACAG
GTATATTGTTTTGGTGACATTCAGAAAGGAAGTATGAACAGGCAATCACAGTCTCTGATGAAATCTAGAGAGAAAGGCTATCTGGTGAGCTGCTTGTGCAATGTGAGGCAGGGCAATGGGTTTACTCT
TAGGGAAGGTTCTGTGGACTAGACTGGATGTTGAGAGTGACTGCCCCAATCCGTCCTGAGGAATACTTACTTGCACATTCTTTTAAAAAATCAGGAACATGACCTAGGGATGCCTTCCTTGGAGCACT
GAGAATTGGAGTTTTAAAGAATAAACATAAAAGTTAAAGATCTTGCTTCTGTTTTGACTACAAAGAAGACGGATCATCTTGGTTCAAACCAAGGCCAAGGGACTGGGATTTCCAAAGTTAGCAGCATA
TGGACTGCAGTTCTGTCACAACATTGCATGTATTCCTCCTCCTAAAGAAACCAGGTCTTCTTGGGAACTGTAATTGTTTCACAGGGTATGTCGTTGTTCTTCCTGTGGGAAACTATGGTCAAGCAAAG
GTAACAGCAGCTACAGTGCAGGTTATGTATTTCCCGAGATGGCAAGAAACTAACTTTTGAGCTCTCTGTTGTACTTTCATTTACTATAACTTCTTTCGGTTGGAAGACCATGGGAAATTTTAGCTTAT
GATGAGGCGGTGGCCTATGAATGTCTAGTGAATAGGACAGTATGGCTTCTATTTTCCCTTTGAAGAGTAATCTGTAGAGTTATATTTCTGGCATTGTATATAGTATAGCATTGGAATTGTCATACCCT
AGCTTCAGCTATAGCATAGCCACCTGTTCCATTGCAGGGGACGTAGTGGAGAGGAAAGCTGAATGACCCTCATCTATTTAGTCAGCAACCACTCCAGAGGAGTTTGCTACGAGCTCCAGTAGGCTTTC
AGCCATGTTTCTAGGCTGCTGTGTTCATTTAAACTGGCTTCGTATATTTCTTCTCTGTCTCTCTTTCAGTGGTTTCCCACAAACTTTTCAAAGTTTTTGTTCATAGTTCCAAGCATCGTAGAATCGTT
TATTTTGTCTTTGAAAATTAGCGTGCACAGAACGTTGTGGCCACGCAGAAGGTGGGGAGTGGGTGAGAGAACGCACATTTCCCACTGCAGGTGTTTTCCGGAGTGAGGGTTCCTTCTACCTACCAGGG
CATGCGGGACAGTTCAGGGCCATGAAATACTACTAGGCAAAACAAAAGGAAAAAAAGGTTTCTAAATTGTCTGAGTGTCTATCCAGGTCCTGAATAGAGTAATTGCCGTGTGATTACCTCAAACCCAC
ATGGATCCTCAGGCTACACTTGTAGGAAACTTCCAGGGCTTGCATATAGGGTAGCAGATCTTCAATGATTGAACCGAAGCTGAAAAAGTTCCCCTGCAGATCCGCTTTTCTATCTTTAATTTGGCCCA
TTATGATCTCAGGAGATGTTTTTGAGAGTGGGTAGACTCTTGTCAGGTCTAGGAGTTGGATTTCAATCATAAACTTAGTAGCTGATACTTGTGGCGCTAACTTTCAGACACATAAGTGGTTTATATCT
ACACACTACTCACGACTCATCCTCTTAGCACTCCAAACCCTCCTTCTCTTTGACCTGGTCTTATCTCAGAGACCAGAGGCACAGTCAGATTGCTTTTAGGCTGTGGAAATCAAGATTAAGGAAGATTC
ACATGGATGTGTTGGGATTCTGCCCACATTCTCTTAAGCCTCCTTTCCTAGCCTTCCTTTAAATGCGACTTCCCCTGCTTAGTTCCCTGTTAAGAGCAACTTACGTTGTAGCACTCCCTGTTGACGTT
CAGTGTGGCAATACCCATGGAATAGTGTGTGCTCTGTGTTCTGTGTGCTGTGTGTTTGCACATGCCACGGCTCCTTCATCAATCACTGTATTAACAATAGCCACTAATTGTTAAAAGCAGTTGATACA
AATGCATTGTGTTCCTGCTGGACGAAATTTACTTTAAGAGTCTATGTCTTTAATTAACATTCAGTTCCTAGATTTATTTAAAATATGACCATTTAGGGGATTATTATGATACTAGGTAAATACTTATA
TATGCAACCTTTATTTTTTTGGCCTGATACAAAGATTTCACTTTTTAAAATATCACGATCTAATGTAACTCAAGGGATAAAGTCCCATGGGCAAGCCCAGCCTCTTAGTCCCTGAACATTGTTCAGGT
GACATGATTGATCTCTGTGGGACAGCATTAGAGACCACACAGAGCTGGTTTCTCTCCCATTAGTTGATTTATGGAATTACATTAGTGAAGCTGTACCTCTGGGAGGCTCCCCTGCCTCCCACTCCTGC
TCTCTTTCCTGCCACAACTTTATAGAGAAGAGATGGGAAAACTGGGGGAAAAAACAGTTAAAAGGGTGGTTATGTTTTTCTTTCTCTTTTCTCTCACTTAAAAAATAGGAAGTGTGCCTATGTACCAG
CCCCCCAGCAATGTTTCTAGAAGCCAGCTCGAGATTCTGAAGGATTTGATGAAAAACATTCTGATGTTATCAAGTGAAACCAGATAACTTGGTTTAGAAACGTGTTTTAGAAGTGGAGAGAGACACTA
CGTATTCATTTTAAGCTCTGGGGGCCCCAACCAAGGGCAGTTGTGAAATTCTGGACAAAGCACTGTGTCTGTAACTTGTGCAAAATGATGATGGCTGCCTGCTAAGAAAATTAATTTGTAGCCCACAT
CTAAAGTAGATGTGTCACTATCCAGTTCGTAGCTGCAGAAAACTAGCAAATGACTGAACACTTCAGAAGGTCTTAAAGTCTACTGGGTTGTTTTAAAAAGTATATATGCATAGATAAAATATAATAAA
TCTTGCATATTTTAAGTTGAAACTTTTTCAGTTTGTCATTTCATGTCGTAGTTTCAAAATGAGTTTTCTGTCTAACAATTAAGACATGCTCGCAGGAAGTATTTTTTAATTTGTTTACTTCACAACCC
AACATCAGCCCTTCCTCTCCTCCCAGCACCCTCTCATGCAAGTCCTACCCCCATTTCACCTTCCCCTTCTCTTTAGAAGAGGAAGCTCCCCTCTGGGTATCGCCTCTGAATGTCCTGCACATCAAGTC
CCTGGGGGACTAGACACATTCTATCTCTCTATAGGACAGGAGGTTTTTTTTTCCCCAATAAACTCCTAACCAACTGATACTTTTTTTGTTACATTAGAATGTAACAAGGCGATAATGTAAAAGGAAGA
CCCAGAGTCTATAAATGATAAGGAAAAGTTTAGTTATGGTCAGAGATATGAGGCAGTTTCATTGTGAGGACACTGAGGTACCCAGGGAGCTGCTCTGCCCTTTAGATCAGTCCAAAGGAGTTAACGTT
GTTTTTATGCACACCAGAGCTCAAATTGTACATAATAAATCCATTCAACTTCATCTGTTAGTTAAAAATATAATTGCTTATGAAAATAAGATATATTTTTTGCTTCCTAAATGAAACTGATATTCCTT
TCTGTCTAAGCAGCATGGAAAAAAATCTAAGCAGTATTTTATGTGGCAATTAGAAGTAGTGAAATAAAATTGAGAAAAAAAATCTATAAACAATACCATATACAGACTATTTCTTGGAAACTTAGACG
TCATCAAACAAAAGGCAAGAAGACATTCAGAAAGACAACGAAGAAAAGAAATCAAATAACATTGAACTTTAGGCGCAACTTAATCGGATGAAGATATTTGGAGAAGAAGGGGGTGTTTATTGGGCAAC
GGAGGTTGTAAAAGTTTCTTGCCTTGAAAAGTTTTAATGATTTGATTACTGAATTACTTTTCTGCATACCATCTACTTTTCTTTTGGATGGAATGCCAGAGTTTCACAGAGTCAGACTTAGAGACTGA
TGTAAAGCCATTTGGCAAAGTGATCTGTAAGACTGGATTTAAGAGGTCTGCACAGAAGATGGAGGACCACTGTACTTTCTCCAAGTACAACATTTTCTACCATGTTGGAAACTGGAGACAGCAACTGC
TGTGAGCTCTGAAACCTTGTTGTGATGTTCATTTTGGATATGAAGTTAAACATTTACTTACCTTAGTATTTCCTAGGACTAGGCTCAAAGGTGTTTTTAAGAAGTTGCAGGTCCTCTTAAGGTCCATC
ACTCCATCAGAGTTGACCAGGTGATCTGAATATAAAGTTTACCTTTACCAGAAAACAATTCTCTCCGAATTTGCGTTGCAAAACTTTAATAATATGGTGTCCTACTCAGTACATTTTTCATAAGCCAG
GTGTGTTTCAACTTCTTACATTATACAAAATACTAAGAGATTCTTGGTCAAGCCACACAGCAATATCTAGGTAAAATAATAGGTTGAAGTTAGGATGCATTAAAATATTAAATCTTCTCTTATTCATA
AGTTAATTTATGAAAGCAGAAGTGAACTCAGAATACTTTGTACAGGGTGTTGGTTACAAGTGTGTTTTCTCAGACACTGGGAGGAGGGCGATGTTAGATGGTTTGGATGGAAGAAGTCTGGAAACGTC
GTTTTTATAAAAACTTGTTTGCAGGAATCTATTTCGTATAGGCTATAAGTGCTGTGGGTATGTGTGTGCATAGTTTTGTCCCCTCAGCGCCACTTCAGTGTTTATGCCTACCTTATACTTACTCTTTG
GCAGTGCTCTGGTATCCTTGGGAGTTCCATGCTACCCGTGGAGGCACGTGGGAGTGATTTTATCCAAGTCACATCTTGTTCTATCTTTTGCAGAGACACCTGCCCAGAAACTGAATTATTCTGCTGGG
TAACTGAAAACCCTCGCTCCATTTCAGCAGTGTGTTTCCGTTTTCTATTGAGTTACGCCGTATCATACTTCACGTGTGACAGATATTTAATAATGTTGAGTACTTAGCTCTGCGGGGGTCGGAGGGAT
CCTAGCAGGCTTGTTAGCTCTAAGTTAAAGCATTAGAAGGATCTTTCTCCCTTTGTGAAACTTACAGCCCATGTCTTAGTCTCCTTTAGGAGTTTGAGAACACATACATAGGGAGATCAAGCTCACTG
GCTCTCCTCCCCATTTTTCTTGGTATCTATTACAAATGTTTTAATGCAGCTTCTTACTAATGGCAAAACAGTTACTTTTCATGTAAGTCATATTCATTTTGTATTTATTTTATGTAAAATCAGATATA
AAGTATATTCAGGAAATACAATACTAGCTTCCTGGCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTTTATTTCTTTCTTTCTTCTTTATGTTTTAGTTTAAAAATCAACATCAGGGCCGTGTTGTCAC
ATAGAGAATCTATGAAAAAGCAGCTCTTGTCTCAAGCAATGCCTGAGACATTAGACAACTTTATTGAGAGAGTGCTTCTCTACGTGACTTAGTTCCAGAGGCTCAATGTGAGGAAAGAGTTAAATGCT
TTCTATAAAGTTAGAGAAAACATTTAGTGTTGGGAAACTGAAATGTATATATTAGTAAACCTTATCCAGGTAGAAGATACAGGCATTGGTTTAGTTTAGGTGTGAGACAGGTAAGGACGGTTTTGAGG
AAAAAGCGAGAGGCCCTTAGAGAAGTGGAATTCTAACCACAGAAGTATTTTATTTTTTTAATTAAAAAAACATACAACTAGGATGCTAAACACAACATAGAAGAACGTTTGTCAAGAGGGAACGTTCA
TCCCTTCATCCTTCCAGAAGTTTGAAAGTTGGCAGAGAAGAGAACAGGAGAAAAGGAAGGAACAAGTGTTGGAGATCTGACTTAACGCCTTTGGCTTGAGAGTGAGAGCTGTGGCTTCCAGCTTAGTG
CTGAGTGAATTCTCAGTGAGGTCTGTGTCCCAGCTGATGTGATTTTGATGCGTGCCCTCAAAACACTTGGTAGCATAACTCCAGAGTACAGTGAAAACACTTCCAGGATTAGTAGAGAACAAGCTCCC
CTTTGAGTCTGACCTACATTTAATTTATATCTTAGAGGGCAGTCTAAAAAGTTGCAGAAAGTGTTGAACAGGGCGAAAACTGCTGAAAGTGCTATTCTCTGCTCAGCATAGCAGACCATAACCGAATG
ATTGATAGGAGCATCTGAGGGATAGAGATCAAGTCGGATGAGGAGAGACCATGGCAGATGCCTGTAGAGAGGGAAGAGTGATGACGGGCAGCTCTGTGGATTTCAGCAAATCTGGCAAATTCCGAAAA
AGACCTATTTTCTCTAAAACTTCCTAAAGTAGAAGGTGGTGAAATACCTTTCCTTAAAGGAAGAAAACCACTGAAATGTAATCATGTGGAAAGGGTCGTAGTTAGCGATGGTACATCAGTGGTCAAAA
ATTATTGTGCTGGGAAATGACTATGCTGTGGAAATGTTTCTGTAGGCTAAGTGATGATTTTGATGGAGTTAAAATAAGGAAAAGGATCAAATATAAAATATAAATCAGTGAGAGGTCAGCTGCGAAAC
TTACTAAATCTTAAATCTGCAATTTTCTTTTAGTTCACAGAAAGCAGAACAGAGAGTGCTGCCTTGATCCATCCTCACAAGAATATGTTTTCTGTTTGCTGCAAGGCTGCATCGTGTGGAGTCTCTCT
GGGTTTGAGTGATGTGGGGTTCAGTTGAGACCGATGCTAAGTTTCTCAGGTTACGGATGATAGTTTGTTAGACTAGTACAAGGGTAGTATATCAGAGGTCCATGAAGTCCGTGCGTCAGCTTCTCCAG
AGGATGAGAGAAAGTGGAGTAAAGTAGAACAGAGCAGGAAACACATAGATATACCACGGGCAAGTGGTGCCCCTTAGTGATGGCTTCAACCGCATTAGGCAGGCGTGTCAAATGTGAAGCTGTTGACT
ACTTTCAGATACAATTTGGAAAATGTTAGCCATAGCTGTAACACCATTGAGCATGTCTTTAGCGATGAAGGAAATTATATTTGATCATTTTTTAGTAAGATAGGGAGTAAACTTTATGTGTTCTGTAA
GCAGCCATGCTTGGATTCTAAGATAGACTTGGGCCTGTGTTGTGCATTTATAGAGCTGGTAAGAGTGTGGCAAAACACGTGGTAAACTGGATGAGGAGGAACGCCCCTTTAGGCAGAAGCTGCTGCTT
TCTAATGCTTGAATGTAACTTCAGTAGACACGTGGGTGTGGATACATACAGTTACAGTGTGTCCAGGTTTAAGGAAGCACTTTCCTTTATTTCCAACTGCCCTCTGTAGGTACCTTTATGATCCCCTA
ACTCAAGGTCTTAGTCTTTTATCCAAGGATGTTCTTAGTTACCTCTTACGTTCCATTGCCATCTATGAAATGAAATAATTATAAATGGAAGAGTTGAATGTTTAGACAACTCAAGAAGCAATTGCACA
CTTGTGGACATGGTTCATTTTACTTTTGTCCTCCATCCTGGACAAGGGACACAGTGATGTGGTGACTCCAGTACCACGGTGTGTGGTGCTTCATGTCATAGATTATTTTTGCTGTATTTTGAGGACTA
TGTTATAGGCTCTAAGTGAGGGGAGGTAAATATTAGAAGAAACACAGAATGTACAGAGCGGGAAGGAGCACATGCAGGCTACAGGATGCTGCAGACTGGGAAAGCATTGAGCTCTAGGTCACTTTGAG
TCTGCTCAAATCAGGAATGAATAGCAATTGTTAATGTTTTTCAGTCTTTGAGATCTGAGATCCATCCCAGATGGATCTGGGATCAGGCCCACTAGAACCATTCAGAGTTTTTCTTCATTCACCACAAT
GGAGAAATTAGTTCCAGGGAGATTAGCTGAGCTTAGCTTTTCCTTGCCTTTGCTGAATTCTTTCTAGCCTTCCCCAACTCTCTTCTTTCCTTTCTTTTCCTGTTTCAATTTCAATTTAAGGATGAAAT
GCAGCTATTAGAGACATAGGAAGAGTAAGGGGAGACGATGGATCCTTAACATTAACTAACGATAGTGCTTAGGTAACTAAAAGCATTTACTTCTAAGCAACCAAGTATTCAAAGCTGTGAGCATCACT
TTAAGGAAGTTATGGAAAAACACAGAATTGAGCATTTAGAAAAGATTCCAGAACAACGGTGAGAAGATTATTGCTTACTATGTGTTATAATCACATACCATGGCTAAAACAGTAGGCTTGTTCATTTC
TTTTATGAGACTATGTTTGCACAAATATGTAGAAAAACCCACAAACACTTTCTGAGGATGAATTTGAACCTATAGACTGGAGTATTGTTGGGATGTGGCGATCCTCTGATGTCAAGGTAGCAGAATCC
TTCATGTGTTTGTCGTCTTAGTGTGGATGAACTCAAATAAACTCTCAGTGATTGAGGGCACATGTGAAAAACCAAGTCTCATTAAATCAGTTGTTGTTTTTATATTTTTTATTTCAAAATTACTGAGG
AAGACAAAGAGGTCAAAGACTAATAATTCCTTGTACTGGTGAATCTTAGTTGAAAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCAAAGAGAA
GAGAGAGAATATTGGGAGGTACATCTGCAAGGCCTCGTACGTCTCTGAATTTCTCTGATTAATTTAGGAGCATAAAACCCTCAGGGGGTTCTGGGCTGGGTCTCTGTCAGTGGCTGAGTGTTACCAGA
CGAGATGTTGAACAACTAACTTGCAAGTTAGTGACTTCGATCAAAACATTAGCCAACTTACACCTTTATGTAACATCAAAAAATTTTTTTTTCTCCAGCCTCCATGTCTGTAGGAATGAGAACCACCA
TAAGTAAGACTGGATCATAATTGTAACTATTGGGTTTTAATTTTAATAAAATTAAAGGCGATTCAAA

hide sequence

RefSeq Acc Id:

XM_006233341 ⟹ XP_006233403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	2	225,329,044 - 225,346,737 (+)	NCBI
mRatBN7.2	2	222,664,148 - 222,678,554 (+)	NCBI
Rnor_6.0	2	239,414,889 - 239,428,829 (+)	NCBI
Rnor_5.0	2	257,941,014 - 257,965,727 (+)	NCBI

Sequence:

show sequence

TCCTCTCTGCAACAAGAAAAAAAAGCCATTTACAGTTGTAACAGTTGGAGGATAATGCAAAGGAAGACGCTGCCTGGGAATTCACCGTCTGTGGACATGCGCCCCAGAGAGGACTAGAGCAGCCCTCA
CCTTGCTCTCCCCACCCGGATCCCACTTTCCTGCACGGCTCGGCCCGTACCCCGACCCCACCATCACCCGCTTCCCTTCCCCCCACCTCTCCCCCTTTCCCACCCAGGTGTCGGACCAGGCGGTCCCC
ACTTCCACCCTGCACCCCTTCTTCCCCCCCTGCACCATGAACACCAATGTCTGCGTGGAGCCGGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAGAGCCACCTGCCCGAGGGGGCCCTGAACAG
CCTTGTGGATTACAACTCTGAGATGGAGCGCTATCGCTCTTTTGCCACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGCAGGCAGCCAAGATCGCGCGCATCACCACCCCCATCTTCCCCAGCA
GCGCCGCCGCCGCCGCGGCTGCTGCGCGCATCGGCATGTCCCCGTGGAACTGCGACAACGCGGCCACCGCCGCCGCCACCGCGATGCTCTGGGGCAGCGGGGGCGGCGGCGGAGGCGGTGGGGGCGGG
GGTGGGGGCGGCGGAGCCGGCAGGAAATCCTCCTCGGCCGCCGCCTCCTCCTCCACCTCCTCCTCGGCGATCCTCCCCGCCGCCGGCGGTGGCGGTGGCGGCGGCGGCAGTGGCAGCGGCGGCGGCGG
CGGCGGTGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGTCTGGGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTCTCCACCTTATCCCCCG
AACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTCCCCGAGCGGGTGGGGACTTTTTCCGCTATCCCGGCTTTAGGGGGCATCTCA
TTACCTCCAGGGGTCATCGTCATGACAGCCCTTCACTCCCCCGCAGCAGCCTCAGCAGCCGTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTC
GTCCTCCTCGGGGGGAGCTGGCGGAGCCAACCCGGCCAAGAAGAAGAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTGTGGCGTCTGCAGCAGTTGCAGGAACCGCAAAACGG
GACACCAGATCTGCAAATTTAGAAAATGTGAAGAGCTAAAGAAAAAACCTGGCACTTCGCTAGAGGTCAGAGGAGATGATTTCTTGTTTCCCAGTCTTGCCCCCTCCCTCCTCACCCCCCTGCCCTCT
CCCCCACAGGGTTTCTTGTCTGGATTCAAGACGCAGCATCCCCTTTTCTGAAGCTTCTTGCAGGCTGAAACATACTGGCATGGGTGGTTGGCGGAGGACTTGGCCTCAATACCACCCTCTCAGCTGCA
CTTCAGTCGGGACCGCCCTTCGGCTAGAGAGTGCCCCTCCTTTTTTAGTCTCTGGAAAAAAAGGCAATTGGTCTAAGAACCCGAAGTTTTGCATCTGAGTATGCTTAATATTTTCCCTGCTGTTTTAA
ACTGGTCCATCAGGAAAACATCCAAACAAAAAGCTCTGCCCCAAATATTGAACATATTTATCATTCATATATATATACATATATGTATGTATATATATATATATATATATATATATATATATGGACTT
AGTATAGCCCAGACATAACACTACTCATGTTGTACACAACTTAAAGTATACGCATACATATGTATATATACCATCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGCATGTGT
GGGCTGAATTGCCTGGATTCCAAAGGGGATTTTTATCCTCTTCTAGAATAATTTTCTTCTGAGCCTAACAGGATGTTTTTTGTTTCCTGTCTTTTTTTTTTTTTTTTTTTTTTTGCCTTCCTGATAAT
TTTTGAGCCAGCAGAGAGAGTGTAGGGAGCTGCTAGTCACATTTTTGAGATGTGACTTTGAGTAAAATGATAATTATTTACTAATGTGACCTAACGGGGAGCTTATTTTTAAAATAATTTACGTAGTT
CCAGGAAAACTCGGTTGTTTTGTTGTTGTTTTAGATTTTACATCTCCCTTGGGTTCAGCATCTGACAAAGTAACCATTTTGTGGTTGCAAAATTACTCTAAACATAGGAAGGCTTTGGTCGGTGCCAT
ATGTGGTAAATGATAGTTTACTTTTCCTATAGGTCTTTAAAACAGACATTATTCACTAAAGTAATGGTAACATTAGGCTTTTAATTGCATTTTAAATTAATATTGATACATGGGACGAACATTTTATA
TGATAGCCTAATCAAAACACAGGAGGAAAAAATGCAAAATTACAGGTATATTGTTTTGGTGACATTCAGAAAGGAAGTATGAACAGGCAATCACAGTCTCTGATGAAATCTAGAGAGAAAGGCTATCT
GGTGAGCTGCTTGTGCAATGTGAGGCAGGGCAATGGGTTTACTCTTAGGGAAGGTTCTGTGGACTAGACTGGATGTTGAGAGTGACTGCCCCAATCCGTCCTGAGGAATACTTACTTGCACATTCTTT
TAAAAAATCAGGAACATGACCTAGGGATGCCTTCCTTGGAGCACTGAGAATTGGAGTTTTAAAGAATAAACATAAAAGTTAAAGATCTTGCTTCTGTTTTGACTACAAAGAAGACGGATCATCTTGGT
TCAAACCAAGGCCAAGGGACTGGGATTTCCAAAGTTAGCAGCATATGGACTGCAGTTCTGTCACAACATTGCATGTATTCCTCCTCCTAAAGAAACCAGGTCTTCTTGGGAACTGTAATTGTTTCACA
GGGTATGTCGTTGTTCTTCCTGTGGGAAACTATGGTCAAGCAAAGGTAACAGCAGCTACAGTGCAGGTTATGTATTTCCCGAGATGGCAAGAAACTAACTTTTGAGCTCTCTGTTGTACTTTCATTTA
CTATAACTTCTTTCGGTTGGAAGACCATGGGAAATTTTAGCTTATGATGAGGCGGTGGCCTATGAATGTCTAGTGAATAGGACAGTATGGCTTCTATTTTCCCTTTGAAGAGTAATCTGTAGAGTTAT
ATTTCTGGCATTGTATATAGTATAGCATTGGAATTGTCATACCCTAGCTTCAGCTATAGCATAGCCACCTGTTCCATTGCAGGGGACGTAGTGGAGAGGAAAGCTGAATGACCCTCATCTATTTAGTC
AGCAACCACTCCAGAGGAGTTTGCTACGAGCTCCAGTAGGCTTTCAGCCATGTTTCTAGGCTGCTGTGTTCATTTAAACTGGCTTCGTATATTTCTTCTCTGTCTCTCTTTCAGTGGTTTCCCACAAA
CTTTTCAAAGTTTTTGTTCATAGTTCCAAGCATCGTAGAATCGTTTATTTTGTCTTTGAAAATTAGCGTGCACAGAACGTTGTGGCCACGCAGAAGGTGGGGAGTGGGTGAGAGAACGCACATTTCCC
ACTGCAGGTGTTTTCCGGAGTGAGGGTTCCTTCTACCTACCAGGGCATGCGGGACAGTTCAGGGCCATGAAATACTACTAGGCAAAACAAAAGGAAAAAAAGGTTTCTAAATTGTCTGAGTGTCTATC
CAGGTCCTGAATAGAGTAATTGCCGTGTGATTACCTCAAACCCACATGGATCCTCAGGCTACACTTGTAGGAAACTTCCAGGGCTTGCATATAGGGTAGCAGATCTTCAATGATTGAACCGAAGCTGA
AAAAGTTCCCCTGCAGATCCGCTTTTCTATCTTTAATTTGGCCCATTATGATCTCAGGAGATGTTTTTGAGAGTGGGTAGACTCTTGTCAGGTCTAGGAGTTGGATTTCAATCATAAACTTAGTAGCT
GATACTTGTGGCGCTAACTTTCAGACACATAAGTGGTTTATATCTACACACTACTCACGACTCATCCTCTTAGCACTCCAAACCCTCCTTCTCTTTGACCTGGTCTTATCTCAGAGACCAGAGGCACA
GTCAGATTGCTTTTAGGCTGTGGAAATCAAGATTAAGGAAGATTCACATGGATGTGTTGGGATTCTGCCCACATTCTCTTAAGCCTCCTTTCCTAGCCTTCCTTTAAATGCGACTTCCCCTGCTTAGT
TCCCTGTTAAGAGCAACTTACGTTGTAGCACTCCCTGTTGACGTTCAGTGTGGCAATACCCATGGAATAGTGTGTGCTCTGTGTTCTGTGTGCTGTGTGTTTGCACATGCCACGGCTCCTTCATCAAT
CACTGTATTAACAATAGCCACTAATTGTTAAAAGCAGTTGATACAAATGCATTGTGTTCCTGCTGGACGAAATTTACTTTAAGAGTCTATGTCTTTAATTAACATTCAGTTCCTAGATTTATTTAAAA
TATGACCATTTAGGGGATTATTATGATACTAGGTAAATACTTATATATGCAACCTTTATTTTTTTGGCCTGATACAAAGATTTCACTTTTTAAAATATCACGATCTAATGTAACTCAAGGGATAAAGT
CCCATGGGCAAGCCCAGCCTCTTAGTCCCTGAACATTGTTCAGGTGACATGATTGATCTCTGTGGGACAGCATTAGAGACCACACAGAGCTGGTTTCTCTCCCATTAGTTGATTTATGGAATTACATT
AGTGAAGCTGTACCTCTGGGAGGCTCCCCTGCCTCCCACTCCTGCTCTCTTTCCTGCCACAACTTTATAGAGAAGAGATGGGAAAACTGGGGGAAAAAACAGTTAAAAGGGTGGTTATGTTTTTCTTT
CTCTTTTCTCTCACTTAAAAAATAGGAAGTGTGCCTATGTACCAGCCCCCCAGCAATGTTTCTAGAAGCCAGCTCGAGATTCTGAAGGATTTGATGAAAAACATTCTGATGTTATCAAGTGAAACCAG
ATAACTTGGTTTAGAAACGTGTTTTAGAAGTGGAGAGAGACACTACGTATTCATTTTAAGCTCTGGGGGCCCCAACCAAGGGCAGTTGTGAAATTCTGGACAAAGCACTGTGTCTGTAACTTGTGCAA
AATGATGATGGCTGCCTGCTAAGAAAATTAATTTGTAGCCCACATCTAAAGTAGATGTGTCACTATCCAGTTCGTAGCTGCAGAAAACTAGCAAATGACTGAACACTTCAGAAGGTCTTAAAGTCTAC
TGGGTTGTTTTAAAAAGTATATATGCATAGATAAAATATAATAAATCTTGCATATTTTAAGTTGAAACTTTTTCAGTTTGTCATTTCATGTCGTAGTTTCAAAATGAGTTTTCTGTCTAACAATTAAG
ACATGCTCGCAGGAAGTATTTTTTAATTTGTTTACTTCACAACCCAACATCAGCCCTTCCTCTCCTCCCAGCACCCTCTCATGCAAGTCCTACCCCCATTTCACCTTCCCCTTCTCTTTAGAAGAGGA
AGCTCCCCTCTGGGTATCGCCTCTGAATGTCCTGCACATCAAGTCCCTGGGGGACTAGACACATTCTATCTCTCTATAGGACAGGAGGTTTTTTTTTCCCCAATAAACTCCTAACCAACTGATACTTT
TTTTGTTACATTAGAATGTAACAAGGCGATAATGTAAAAGGAAGACCCAGAGTCTATAAATGATAAGGAAAAGTTTAGTTATGGTCAGAGATATGAGGCAGTTTCATTGTGAGGACACTGAGGTACCC
AGGGAGCTGCTCTGCCCTTTAGATCAGTCCAAAGGAGTTAACGTTGTTTTTATGCACACCAGAGCTCAAATTGTACATAATAAATCCATTCAACTTCATCTGTTAGTTAAAAATATAATTGCTTATGA
AAATAAGATATATTTTTTGCTTCCTAAATGAAACTGATATTCCTTTCTGTCTAAGCAGCATGGAAAAAAATCTAAGCAGTATTTTATGTGGCAATTAGAAGTAGTGAAATAAAATTGAGAAAAAAAAT
CTATAAACAATACCATATACAGACTATTTCTTGGAAACTTAGACGTCATCAAACAAAAGGCAAGAAGACATTCAGAAAGACAACGAAGAAAAGAAATCAAATAACATTGAACTTTAGGCGCAACTTAA
TCGGATGAAGATATTTGGAGAAGAAGGGGGTGTTTATTGGGCAACGGAGGTTGTAAAAGTTTCTTGCCTTGAAAAGTTTTAATGATTTGATTACTGAATTACTTTTCTGCATACCATCTACTTTTCTT
TTGGATGGAATGCCAGAGTTTCACAGAGTCAGACTTAGAGACTGATGTAAAGCCATTTGGCAAAGTGATCTGTAAGACTGGATTTAAGAGGTCTGCACAGAAGATGGAGGACCACTGTACTTTCTCCA
AGTACAACATTTTCTACCATGTTGGAAACTGGAGACAGCAACTGCTGTGAGCTCTGAAACCTTGTTGTGATGTTCATTTTGGATATGAAGTTAAACATTTACTTACCTTAGTATTTCCTAGGACTAGG
CTCAAAGGTGTTTTTAAGAAGTTGCAGGTCCTCTTAAGGTCCATCACTCCATCAGAGTTGACCAGGTGATCTGAATATAAAGTTTACCTTTACCAGAAAACAATTCTCTCCGAATTTGCGTTGCAAAA
CTTTAATAATATGGTGTCCTACTCAGTACATTTTTCATAAGCCAGGTGTGTTTCAACTTCTTACATTATACAAAATACTAAGAGATTCTTGGTCAAGCCACACAGCAATATCTAGGTAAAATAATAGG
TTGAAGTTAGGATGCATTAAAATATTAAATCTTCTCTTATTCATAAGTTAATTTATGAAAGCAGAAGTGAACTCAGAATACTTTGTACAGGGTGTTGGTTACAAGTGTGTTTTCTCAGACACTGGGAG
GAGGGCGATGTTAGATGGTTTGGATGGAAGAAGTCTGGAAACGTCGTTTTTATAAAAACTTGTTTGCAGGAATCTATTTCGTATAGGCTATAAGTGCTGTGGGTATGTGTGTGCATAGTTTTGTCCCC
TCAGCGCCACTTCAGTGTTTATGCCTACCTTATACTTACTCTTTGGCAGTGCTCTGGTATCCTTGGGAGTTCCATGCTACCCGTGGAGGCACGTGGGAGTGATTTTATCCAAGTCACATCTTGTTCTA
TCTTTTGCAGAGACACCTGCCCAGAAACTGAATTATTCTGCTGGGTAACTGAAAACCCTCGCTCCATTTCAGCAGTGTGTTTCCGTTTTCTATTGAGTTACGCCGTATCATACTTCACGTGTGACAGA
TATTTAATAATGTTGAGTACTTAGCTCTGCGGGGGTCGGAGGGATCCTAGCAGGCTTGTTAGCTCTAAGTTAAAGCATTAGAAGGATCTTTCTCCCTTTGTGAAACTTACAGCCCATGTCTTAGTCTC
CTTTAGGAGTTTGAGAACACATACATAGGGAGATCAAGCTCACTGGCTCTCCTCCCCATTTTTCTTGGTATCTATTACAAATGTTTTAATGCAGCTTCTTACTAATGGCAAAACAGTTACTTTTCATG
TAAGTCATATTCATTTTGTATTTATTTTATGTAAAATCAGATATAAAGTATATTCAGGAAATACAATACTAGCTTCCTGGCCTTCCTTTCTTCCTTCCTTCCTTCCTTTCTTTATTTCTTTCTTTCTT
CTTTATGTTTTAGTTTAAAAATCAACATCAGGGCCGTGTTGTCACATAGAGAATCTATGAAAAAGCAGCTCTTGTCTCAAGCAATGCCTGAGACATTAGACAACTTTATTGAGAGAGTGCTTCTCTAC
GTGACTTAGTTCCAGAGGCTCAATGTGAGGAAAGAGTTAAATGCTTTCTATAAAGTTAGAGAAAACATTTAGTGTTGGGAAACTGAAATGTATATATTAGTAAACCTTATCCAGGTAGAAGATACAGG
CATTGGTTTAGTTTAGGTGTGAGACAGGTAAGGACGGTTTTGAGGAAAAAGCGAGAGGCCCTTAGAGAAGTGGAATTCTAACCACAGAAGTATTTTATTTTTTTAATTAAAAAAACATACAACTAGGA
TGCTAAACACAACATAGAAGAACGTTTGTCAAGAGGGAACGTTCATCCCTTCATCCTTCCAGAAGTTTGAAAGTTGGCAGAGAAGAGAACAGGAGAAAAGGAAGGAACAAGTGTTGGAGATCTGACTT
AACGCCTTTGGCTTGAGAGTGAGAGCTGTGGCTTCCAGCTTAGTGCTGAGTGAATTCTCAGTGAGGTCTGTGTCCCAGCTGATGTGATTTTGATGCGTGCCCTCAAAACACTTGGTAGCATAACTCCA
GAGTACAGTGAAAACACTTCCAGGATTAGTAGAGAACAAGCTCCCCTTTGAGTCTGACCTACATTTAATTTATATCTTAGAGGGCAGTCTAAAAAGTTGCAGAAAGTGTTGAACAGGGCGAAAACTGC
TGAAAGTGCTATTCTCTGCTCAGCATAGCAGACCATAACCGAATGATTGATAGGAGCATCTGAGGGATAGAGATCAAGTCGGATGAGGAGAGACCATGGCAGATGCCTGTAGAGAGGGAAGAGTGATG
ACGGGCAGCTCTGTGGATTTCAGCAAATCTGGCAAATTCCGAAAAAGACCTATTTTCTCTAAAACTTCCTAAAGTAGAAGGTGGTGAAATACCTTTCCTTAAAGGAAGAAAACCACTGAAATGTAATC
ATGTGGAAAGGGTCGTAGTTAGCGATGGTACATCAGTGGTCAAAAATTATTGTGCTGGGAAATGACTATGCTGTGGAAATGTTTCTGTAGGCTAAGTGATGATTTTGATGGAGTTAAAATAAGGAAAA
GGATCAAATATAAAATATAAATCAGTGAGAGGTCAGCTGCGAAACTTACTAAATCTTAAATCTGCAATTTTCTTTTAGTTCACAGAAAGCAGAACAGAGAGTGCTGCCTTGATCCATCCTCACAAGAA
TATGTTTTCTGTTTGCTGCAAGGCTGCATCGTGTGGAGTCTCTCTGGGTTTGAGTGATGTGGGGTTCAGTTGAGACCGATGCTAAGTTTCTCAGGTTACGGATGATAGTTTGTTAGACTAGTACAAGG
GTAGTATATCAGAGGTCCATGAAGTCCGTGCGTCAGCTTCTCCAGAGGATGAGAGAAAGTGGAGTAAAGTAGAACAGAGCAGGAAACACATAGATATACCACGGGCAAGTGGTGCCCCTTAGTGATGG
CTTCAACCGCATTAGGCAGGCGTGTCAAATGTGAAGCTGTTGACTACTTTCAGATACAATTTGGAAAATGTTAGCCATAGCTGTAACACCATTGAGCATGTCTTTAGCGATGAAGGAAATTATATTTG
ATCATTTTTTAGTAAGATAGGGAGTAAACTTTATGTGTTCTGTAAGCAGCCATGCTTGGATTCTAAGATAGACTTGGGCCTGTGTTGTGCATTTATAGAGCTGGTAAGAGTGTGGCAAAACACGTGGT
AAACTGGATGAGGAGGAACGCCCCTTTAGGCAGAAGCTGCTGCTTTCTAATGCTTGAATGTAACTTCAGTAGACACGTGGGTGTGGATACATACAGTTACAGTGTGTCCAGGTTTAAGGAAGCACTTT
CCTTTATTTCCAACTGCCCTCTGTAGGTACCTTTATGATCCCCTAACTCAAGGTCTTAGTCTTTTATCCAAGGATGTTCTTAGTTACCTCTTACGTTCCATTGCCATCTATGAAATGAAATAATTATA
AATGGAAGAGTTGAATGTTTAGACAACTCAAGAAGCAATTGCACACTTGTGGACATGGTTCATTTTACTTTTGTCCTCCATCCTGGACAAGGGACACAGTGATGTGGTGACTCCAGTACCACGGTGTG
TGGTGCTTCATGTCATAGATTATTTTTGCTGTATTTTGAGGACTATGTTATAGGCTCTAAGTGAGGGGAGGTAAATATTAGAAGAAACACAGAATGTACAGAGCGGGAAGGAGCACATGCAGGCTACA
GGATGCTGCAGACTGGGAAAGCATTGAGCTCTAGGTCACTTTGAGTCTGCTCAAATCAGGAATGAATAGCAATTGTTAATGTTTTTCAGTCTTTGAGATCTGAGATCCATCCCAGATGGATCTGGGAT
CAGGCCCACTAGAACCATTCAGAGTTTTTCTTCATTCACCACAATGGAGAAATTAGTTCCAGGGAGATTAGCTGAGCTTAGCTTTTCCTTGCCTTTGCTGAATTCTTTCTAGCCTTCCCCAACTCTCT
TCTTTCCTTTCTTTTCCTGTTTCAATTTCAATTTAAGGATGAAATGCAGCTATTAGAGACATAGGAAGAGTAAGGGGAGACGATGGATCCTTAACATTAACTAACGATAGTGCTTAGGTAACTAAAAG
CATTTACTTCTAAGCAACCAAGTATTCAAAGCTGTGAGCATCACTTTAAGGAAGTTATGGAAAAACACAGAATTGAGCATTTAGAAAAGATTCCAGAACAACGGTGAGAAGATTATTGCTTACTATGT
GTTATAATCACATACCATGGCTAAAACAGTAGGCTTGTTCATTTCTTTTATGAGACTATGTTTGCACAAATATGTAGAAAAACCCACAAACACTTTCTGAGGATGAATTTGAACCTATAGACTGGAGT
ATTGTTGGGATGTGGCGATCCTCTGATGTCAAGGTAGCAGAATCCTTCATGTGTTTGTCGTCTTAGTGTGGATGAACTCAAATAAACTCTCAGTGATTGAGGGCACATGTGAAAAACCAAGTCTCATT
AAATCAGTTGTTGTTTTTATATTTTTTATTTCAAAATTACTGAGGAAGACAAAGAGGTCAAAGACTAATAATTCCTTGTACTGGTGAATCTTAGTTGAAAGCAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCAAAGAGAAGAGAGAGAATATTGGGAGGTACATCTGCAAGGCCTCGTACGTCTCTGAATTTCTCTGATTAATTTAGGAGCATAAAACCCTCA
GGGGGTTCTGGGCTGGGTCTCTGTCAGTGGCTGAGTGTTACCAGACGAGATGTTGAACAACTAACTTGCAAGTTAGTGACTTCGATCAAAACATTAGCCAACTTACACCTTTATGTAACATCAAAAAA
TTTTTTTTTCTCCAGCCTCCATGTCTGTAGGAATGAGAACCACCATAAGTAAGACTGGATCATAATTGTAACTATTGGGTTTTAATTTTAATAAAATTAAAGGCGATTCAAA

hide sequence


Protein RefSeqs	NP_445794	(Get FASTA)	NCBI Sequence Viewer
	XP_006233401	(Get FASTA)	NCBI Sequence Viewer
	XP_006233403	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG42071	(Get FASTA)	NCBI Sequence Viewer
	EDL82242	(Get FASTA)	NCBI Sequence Viewer
	Q9EQC9	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_445794 ⟸ NM_053342

- UniProtKB:

M0RDW5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNTNVCVEPGPSPEAPGLPKESHLPEGALNSLVDYNSEMERYRSFATSFYKTNGGAFPQAAKIARITTPIFPSSAAAAAAAARIGMSPWNCDNAATAAATAMLWGSGGGGGGGGGGGGGGGAGRKSSS
AAASSSTSSSAILPAAGGGGGGGGSGSGGGGGGGGGRTSMHHRNDSQRLGKAGCPPEPSLQMANTNFLSTLSPEHCRPLAGECMNKLKCGAAEAEIMNLPERVGTFSAIPALGGISLPPGVIVMTALH
SPAAASAAVTDSAFQIANLADCPQNHSSSSSSSSGGAGGANPAKKKRKRCGVCVPCKRLINCGVCSSCRNRKTGHQICKFRKCEELKKKPGTSLERTPVPSAEAFRWFF

hide sequence

RefSeq Acc Id:

XP_006233401 ⟸ XM_006233339

- Peptide Label:

isoform X1

- Sequence:

show sequence

MNTNVCVEPGPSPEAPGLPKESHLPEGALNSLVDYNSEMERYRSFATSFYKTNGGAFPQAAKIARITTPIFPSSAAAAAAAARIGMSPWNCDNAATAAATAMLWGSGGGGGGGGGGGGGGGAGRKSSS
AAASSSTSSSAILPAAGGGGGGGGSGSGGGGGGGGGRTSMHHRNDSQRLGKAGCPPEPSLQMANTNFLSTLSPEHCRPLAGECMNKLKCGAAEAEIMNLPERVGTFSAIPALGGISLPPGVIVMTALH
SPAAASAAVTDSAFQIANLADCPQNHSSSSSSSSGGAGGANPAKKKRKRCGVCVPCKRLINCGVCSSCRNRKTGHQICKFRKCEELKKKPGTSLEVRGDDFLFPSLAPSLLTPLPSPPQGFLSGFKTQ
HPLF

hide sequence

RefSeq Acc Id:

XP_006233403 ⟸ XM_006233341

- Peptide Label:

isoform X1

- Sequence:

show sequence

MNTNVCVEPGPSPEAPGLPKESHLPEGALNSLVDYNSEMERYRSFATSFYKTNGGAFPQAAKIA
RITTPIFPSSAAAAAAAARIGMSPWNCDNAATAAATAMLWGSGGGGGGGGGGGGGGGAGRKSSSAAASSSTSSSAILPAAGGGGGGGGSGSGGGGGGGGGRTSMHHRNDSQRLGKAGCPPEPSLQMAN
TNFLSTLSPEHCRPLAGECMNKLKCGAAEAEIMNLPERVGTFSAIPALGGISLPPGVIVMTALHSPAAASAAVTDSAFQIANLADCPQNHSSSSSSSSGGAGGANPAKKKRKRCGVCVPCKRLINCGV
CSSCRNRKTGHQICKFRKCEELKKKPGTSLEVRGDDFLFPSLAPSLLTPLPSPPQGFLSGFKTQHPLF

hide sequence

Ensembl Acc Id:

ENSRNOP00000067828 ⟸ ENSRNOT00000072196

Protein Domains

CXXC-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9EQC9-F1-model_v2	AlphaFold	Q9EQC9	1-198	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-51149	BioCyc
Ensembl Genes	ENSRNOG00000045764	Ensembl
InterPro	CXXC4/CXXC5	UniProtKB/Swiss-Prot
	Znf_CXXC	UniProtKB/Swiss-Prot
NCBI Gene	83824	ENTREZGENE
PANTHER	CXXC FINGER PROTEIN 4	UniProtKB/Swiss-Prot
	PTHR13419	UniProtKB/Swiss-Prot
Pfam	zf-CXXC	UniProtKB/Swiss-Prot
PhenoGen	Cxxc4	PhenoGen
PROSITE	ZF_CXXC	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000045764	RatGTEx
TIGR	TC210132
UniProt	A6HVV6_RAT	UniProtKB/TrEMBL
	CXXC4_RAT	UniProtKB/Swiss-Prot
	M0RDW5	ENTREZGENE, UniProtKB/TrEMBL
	Q9EQC9	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-02	Cxxc4	CXXC finger protein 4	Cxxc4	CXXC finger 4	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Cxxc4	CXXC finger 4	Idax	inhibitor of the Dvl and Axin complex	Symbol and Name updated	1299863	APPROVED
2002-06-10	Idax	inhibitor of the Dvl and Axin complex			Name updated	70584	APPROVED

Note Type	Note	Reference
gene_process	inhibits the Dvl and Axin complex	68802

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Annotations - KEGG (archival)