Cryl1 (crystallin, lambda 1) - Rat Genome Database

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Gene: Cryl1 (crystallin, lambda 1) Rattus norvegicus
Analyze
Symbol: Cryl1
Name: crystallin, lambda 1
RGD ID: 631427
Description: Predicted to enable L-gulonate 3-dehydrogenase activity; NAD+ binding activity; and protein homodimerization activity. Predicted to be involved in D-glucuronate catabolic process to D-xylulose 5-phosphate. Predicted to be located in cytosol. Orthologous to human CRYL1 (crystallin lambda 1); PARTICIPATES IN pentose and glucuronate interconversion pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: crystallin, lamda 1; gul3DH; L-gulonate 3-dehydrogenase; lambda-crystallin homolog
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81535,542,628 - 35,661,563 (-)NCBIGRCr8
mRatBN7.21531,427,011 - 31,545,997 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,427,054 - 31,545,997 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1533,418,360 - 33,537,311 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01534,569,025 - 34,687,978 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01532,827,144 - 32,946,073 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01537,543,727 - 37,663,586 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1537,543,727 - 37,663,584 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01541,389,673 - 41,509,443 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41536,320,075 - 36,440,579 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11536,335,774 - 36,456,279 (-)NCBI
Celera1531,137,966 - 31,257,153 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1Ratautosomal dominant nonsyndromic deafness 3B  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness and autosomal dominant 3bClinVarPMID:27480936 and PMID:28492532
Cryl1Ratautosomal recessive nonsyndromic deafness 1A  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness and autosomal recessive 1AClinVarPMID:15994881 more ...
Cryl1Ratautosomal recessive nonsyndromic deafness 1A  ISOCRYL1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11807148 more ...
Cryl1Ratautosomal recessive nonsyndromic deafness 1B  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Deafness and autosomal recessive 1bClinVarPMID:11807148 more ...
Cryl1Ratcataract 14 multiple types  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Cataract 14 multiple typesClinVarPMID:28492532
Cryl1RatClouston syndrome  ISOCRYL1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:27480936 and PMID:28492532
Cryl1Ratectodermal dysplasia  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Hidrotic ectodermal dysplasiaClinVarPMID:27480936 and PMID:28492532
Cryl1Ratnonsyndromic deafness  ISOCRYL1 (Homo sapiens)8554872ClinVar Annotator: match by term: Nonsyndromic hearing loss and deafnessClinVarPMID:11807148 more ...
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1Ratperinatal necrotizing enterocolitis  ISOCRYL1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18806098
Cryl1RatProstatic Neoplasms  ISOCRYL1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17013881

1 to 20 of 134 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1Rat(1->4)-beta-D-glucan multiple interactionsISOCryl1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of CRYL1 mRNACTDPMID:36331819
Cryl1Rat1,1-dichloroethene decreases expressionISOCryl1 (Mus musculus)6480464vinylidene chloride results in decreased expression of CRYL1 mRNACTDPMID:26682919
Cryl1Rat1,2-dichloroethane decreases expressionISOCryl1 (Mus musculus)6480464ethylene dichloride results in decreased expression of CRYL1 mRNACTDPMID:28960355
Cryl1Rat1,2-dimethylhydrazine decreases expressionISOCryl1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of CRYL1 mRNACTDPMID:22206623
Cryl1Rat1,2-dimethylhydrazine multiple interactionsISOCryl1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of CRYL1 mRNACTDPMID:22206623
Cryl1Rat17alpha-ethynylestradiol increases expressionISOCryl1 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of CRYL1 mRNACTDPMID:17942748
Cryl1Rat17alpha-ethynylestradiol multiple interactionsISOCryl1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CRYL1 mRNACTDPMID:17942748
Cryl1Rat17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of CRYL1 mRNACTDPMID:32145629
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCRYL1 (Homo sapiens)6480464[Tetrachlorodibenzodioxin co-treated with Cycloheximide] results in increased expression of CRYL1 mRNACTDPMID:19684285
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOCRYL1 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of CRYL1 mRNACTDPMID:19684285 more ...
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOCryl1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of CRYL1 mRNACTDPMID:21570461
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of CRYL1 mRNACTDPMID:21215274
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of CRYL1 mRNACTDPMID:20558275 more ...
Cryl1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOCryl1 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of CRYL1 mRNACTDPMID:17942748
Cryl1Rat2,4,6-trinitrotoluene affects expressionEXP 6480464Trinitrotoluene affects the expression of CRYL1 mRNACTDPMID:21346803
Cryl1Rat2-acetamidofluorene multiple interactionsEXP 6480464[2-Acetylaminofluorene co-treated with Diethylnitrosamine] results in increased expression of CRYL1 mRNA and [Diethylnitrosamine co-treated with 2-Acetylaminofluorene] results in increased expression of CRYL1 mRNACTDPMID:14656948 and PMID:16158176
Cryl1Rat2-amino-4,6-dinitrotoluene affects expressionEXP 64804642-amino-4 and 6-dinitrotoluene affects the expression of CRYL1 mRNACTDPMID:21346803
Cryl1Rat2-hydroxypropanoic acid decreases expressionISOCRYL1 (Homo sapiens)6480464Lactic Acid results in decreased expression of CRYL1 mRNACTDPMID:30851411
Cryl1Rat3,3',4,4',5-pentachlorobiphenyl decreases expressionEXP 64804643 more ...CTDPMID:23196670
Cryl1Rat3-chloropropane-1,2-diol increases expressionEXP 6480464alpha-Chlorohydrin results in increased expression of CRYL1 mRNACTDPMID:28522335

1 to 20 of 134 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1RatD-glucuronate catabolic process to D-xylulose 5-phosphate involved_inISOCryl1 (Mus musculus)1624291 PMID:38160RGDPMID:38160
Cryl1Ratfatty acid metabolic process involved_inIEAInterPro:IPR006108 more ...1600115GO_REF:0000002InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Cryl1Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Cryl1Ratcytosol is_active_inISOCryl1 (Mus musculus)1624291 PMID:38160RGDPMID:38160
Cryl1Ratcytosol located_inISSUniProtKB:P147551600115GO_REF:0000024UniProtGO_REF:0000024

Molecular Function
1 to 12 of 12 rows

  
1 to 12 of 12 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Cryl1Ratpentose and glucuronate interconversion pathway  IEA 6907045 KEGGrno:00040

#
Reference Title
Reference Citation
1. Human CRYL1, a novel enzyme-crystallin overexpressed in liver and kidney and downregulated in 58% of liver cancer tissues from 60 Chinese patients, and four new homologs from other mammalians. Chen J, etal., Gene 2003 Jan 2;302(1-2):103-13.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
PMID:15489334   PMID:15809331   PMID:19056867   PMID:23376485   PMID:23533145  



Cryl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81535,542,628 - 35,661,563 (-)NCBIGRCr8
mRatBN7.21531,427,011 - 31,545,997 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,427,054 - 31,545,997 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1533,418,360 - 33,537,311 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01534,569,025 - 34,687,978 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01532,827,144 - 32,946,073 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01537,543,727 - 37,663,586 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1537,543,727 - 37,663,584 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01541,389,673 - 41,509,443 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41536,320,075 - 36,440,579 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11536,335,774 - 36,456,279 (-)NCBI
Celera1531,137,966 - 31,257,153 (-)NCBICelera
Cytogenetic Map15p12NCBI
CRYL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381320,403,669 - 20,525,857 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1320,403,666 - 20,525,873 (-)EnsemblGRCh38hg38GRCh38
GRCh371320,977,808 - 21,099,996 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361319,875,806 - 19,998,012 (-)NCBINCBI36Build 36hg18NCBI36
Build 341319,875,812 - 19,997,943NCBI
Celera132,039,633 - 2,161,963 (-)NCBICelera
Cytogenetic Map13q12.11NCBI
HuRef131,781,253 - 1,903,750 (-)NCBIHuRef
CHM1_11320,946,082 - 21,068,258 (-)NCBICHM1_1
T2T-CHM13v2.01319,596,766 - 19,719,067 (-)NCBIT2T-CHM13v2.0
Cryl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391457,512,491 - 57,635,940 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1457,512,450 - 57,635,986 (-)EnsemblGRCm39 Ensembl
GRCm381457,275,034 - 57,398,483 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1457,274,993 - 57,398,529 (-)EnsemblGRCm38mm10GRCm38
MGSCv371457,893,871 - 58,017,320 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361456,229,144 - 56,352,593 (-)NCBIMGSCv36mm8
Celera1455,069,601 - 55,193,438 (-)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1430.1NCBI
Cryl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554971,182,115 - 1,292,721 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554971,183,707 - 1,316,720 (-)NCBIChiLan1.0ChiLan1.0
CRYL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21420,032,859 - 20,155,259 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11311,145,280 - 11,267,611 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0131,729,724 - 1,852,031 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11320,043,630 - 20,165,344 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1320,043,630 - 20,165,344 (-)Ensemblpanpan1.1panPan2
CRYL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12517,551,586 - 17,733,754 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2517,562,926 - 17,733,630 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2517,619,089 - 17,764,441 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02517,726,192 - 17,871,609 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2517,700,683 - 17,871,604 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12517,597,124 - 17,742,462 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02517,608,651 - 17,753,939 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02517,665,268 - 17,810,580 (+)NCBIUU_Cfam_GSD_1.0
Cryl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945119,654,108 - 119,786,851 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367201,201,697 - 1,334,527 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367201,201,725 - 1,334,483 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CRYL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl11845,475 - 931,648 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.111845,471 - 925,849 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2115,725 - 138,292 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CRYL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.13567,937 - 704,109 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl3567,931 - 688,388 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605743,881,123 - 44,023,426 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cryl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477617,127,002 - 17,312,348 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477617,127,362 - 17,312,271 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Cryl1
55 total Variants

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:42
Interacting mature miRNAs:43
Transcripts:ENSRNOT00000012093
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 29 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152024860037896129Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat

1 to 10 of 29 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000012093   ⟹   ENSRNOP00000012093
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1531,427,054 - 31,545,997 (-)Ensembl
Rnor_6.0 Ensembl1537,543,727 - 37,663,584 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000094908   ⟹   ENSRNOP00000083620
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1531,427,054 - 31,530,546 (-)Ensembl
RefSeq Acc Id: NM_175757   ⟹   NP_786933
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,542,628 - 35,661,563 (-)NCBI
mRatBN7.21531,427,054 - 31,545,997 (-)NCBI
Rnor_6.01537,543,770 - 37,663,586 (-)NCBI
Rnor_5.01541,389,673 - 41,509,443 (-)NCBI
RGSC_v3.41536,320,075 - 36,440,579 (-)RGD
Celera1531,137,966 - 31,257,153 (-)RGD
Sequence:
1 to 11 of 11 rows
Protein RefSeqs NP_786933 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH78685 (Get FASTA)   NCBI Sequence Viewer  
  AAK72608 (Get FASTA)   NCBI Sequence Viewer  
  EDM14344 (Get FASTA)   NCBI Sequence Viewer  
  EDM14345 (Get FASTA)   NCBI Sequence Viewer  
  EDM14346 (Get FASTA)   NCBI Sequence Viewer  
  EDM14347 (Get FASTA)   NCBI Sequence Viewer  
  EDM14348 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000012093
  ENSRNOP00000012093.2
GenBank Protein Q811X6 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_786933   ⟸   NM_175757
- UniProtKB: Q811X6 (UniProtKB/Swiss-Prot),   A0A8I5ZZK9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000012093   ⟸   ENSRNOT00000012093
Ensembl Acc Id: ENSRNOP00000083620   ⟸   ENSRNOT00000094908
3-hydroxyacyl-CoA dehydrogenase C-terminal   3-hydroxyacyl-CoA dehydrogenase NAD binding

Name Modeler Protein Id AA Range Protein Structure
AF-Q811X6-F1-model_v2 AlphaFold Q811X6 1-319 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699718
Promoter ID:EPDNEW_R10242
Type:multiple initiation site
Name:Cryl1_1
Description:crystallin, lambda 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01537,663,576 - 37,663,636EPDNEW


1 to 33 of 33 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-13606 BioCyc
Ensembl Genes ENSRNOG00000008989 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000012093 ENTREZGENE
  ENSRNOT00000012093.4 UniProtKB/Swiss-Prot
Gene3D-CATH N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase, domain 2 UniProtKB/Swiss-Prot
  NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7110482 IMAGE-MGC_LOAD
InterPro 3-OHacyl-CoA_DH UniProtKB/Swiss-Prot
  3-OHacyl-CoA_DH_CS UniProtKB/Swiss-Prot
  3-OHacyl-CoA_DH_NAD-bd UniProtKB/Swiss-Prot
  3HC_DH_C UniProtKB/Swiss-Prot
  6-PGluconate_DH-like_C_sf UniProtKB/Swiss-Prot
  6PGD_dom2 UniProtKB/Swiss-Prot
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:290277 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93049 IMAGE-MGC_LOAD
NCBI Gene 290277 ENTREZGENE
PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN UniProtKB/Swiss-Prot
  LAMBDA-CRYSTALLIN HOMOLOG UniProtKB/Swiss-Prot
Pfam 3HCDH UniProtKB/Swiss-Prot
  3HCDH_N UniProtKB/Swiss-Prot
PhenoGen Cryl1 PhenoGen
PIRSF HCDH UniProtKB/Swiss-Prot
PROSITE 3HCDH UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000008989 RatGTEx
Superfamily-SCOP SSF48179 UniProtKB/Swiss-Prot
  SSF51735 UniProtKB/Swiss-Prot
UniProt A0A8I5ZZK9 ENTREZGENE, UniProtKB/TrEMBL
  A6KHB5_RAT UniProtKB/TrEMBL
  A6KHB6_RAT UniProtKB/TrEMBL
  A6KHB7_RAT UniProtKB/TrEMBL
  A6KHB9_RAT UniProtKB/TrEMBL
  CRYL1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 33 of 33 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-25 Cryl1  crystallin, lambda 1  Cryl1  crystallin, lamda 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-11 Cryl1  crystallin, lamda 1      Symbol and Name status set to approved 625702 APPROVED