Tp53inp1 (tumor protein p53 inducible nuclear protein 1) - Rat Genome Database

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Gene: Tp53inp1 (tumor protein p53 inducible nuclear protein 1) Rattus norvegicus
Analyze
Symbol: Tp53inp1 (Ensembl: Trp53inp1)
Name: tumor protein p53 inducible nuclear protein 1
RGD ID: 631423
Description: Predicted to enable antioxidant activity. Predicted to be involved in several processes, including autophagic cell death; negative regulation of myofibroblast differentiation; and regulation of gene expression. Predicted to act upstream of or within several processes, including cellular response to ethanol; cellular response to hydroperoxide; and cellular response to methyl methanesulfonate. Predicted to be located in cytosol. Predicted to be active in autophagosome and nucleus. Orthologous to human TP53INP1 (tumor protein p53 inducible nuclear protein 1); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: p53-dependent damage-inducible nuclear protein 1; p53DINP1; Stinp; stress induced protein; stress-induced protein; TEAP; thymus-expressed acidic protein; transformation related protein 53 inducible nuclear protein 1; Trp53inp1; tumor protein p53-inducible nuclear protein 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8529,051,267 - 29,069,486 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl529,051,264 - 29,069,484 (+)EnsemblGRCr8
mRatBN7.2524,253,986 - 24,272,250 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl524,260,568 - 24,267,968 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx526,442,178 - 26,460,439 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0528,035,197 - 28,053,458 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0527,836,039 - 27,854,314 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0524,402,895 - 24,419,651 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)Ensemblrn6Rnor6.0
Rnor_5.0529,128,794 - 29,144,271 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4525,008,253 - 25,014,263 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera523,480,259 - 23,486,276 (+)NCBICelera
RGSC_v3.1524,729,972 - 25,014,263 (+)NCBI
Cytogenetic Map5q13NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-demecolcine  (ISO)
(S)-nicotine  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-acetamidofluorene  (EXP,ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-nitrophenol  (ISO)
4-vinylcyclohexene dioxide  (ISO)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
actinomycin D  (ISO)
adefovir pivoxil  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenic trichloride  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
bisphenol F  (ISO)
buta-1,3-diene  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
camptothecin  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (ISO)
carbonyl sulfide  (EXP)
CGP 52608  (ISO)
chlorendic acid  (EXP)
chloroacetaldehyde  (ISO)
chloroethene  (ISO)
chloroprene  (ISO)
chromium(6+)  (ISO)
chrysene  (ISO)
cidofovir anhydrous  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
Cuprizon  (EXP)
cyclosporin A  (EXP)
DDE  (ISO)
DDT  (EXP)
decabromodiphenyl ether  (EXP)
deoxynivalenol  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dicrotophos  (ISO)
dimethylarsinous acid  (ISO)
dioxygen  (ISO)
disodium selenite  (ISO)
doxorubicin  (ISO)
doxycycline  (ISO)
Enterolactone  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
fenofibrate  (EXP,ISO)
ferric oxide  (ISO)
fluvastatin  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
furan  (EXP,ISO)
gemcitabine  (ISO)
genistein  (ISO)
gentamycin  (EXP)
GSK-J4  (ISO)
hydrogen cyanide  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
hydroxyurea  (ISO)
ibuprofen  (ISO)
ifosfamide  (ISO)
irinotecan  (ISO)
isoprenaline  (ISO)
lucanthone  (ISO)
metformin  (EXP,ISO)
methimazole  (EXP)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N(4)-hydroxycytidine  (ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nicotine  (ISO)
Nutlin-3  (ISO)
ochratoxin A  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorooctanoic acid  (EXP)
phenformin  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium bromate  (ISO)
potassium chromate  (ISO)
potassium cyanide  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
quercetin  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
rotenone  (EXP)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
succimer  (ISO)
sulfadimethoxine  (EXP)
sunitinib  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
tremolite asbestos  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
triphenyl phosphate  (ISO)
triptonide  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
autophagosome  (IBA,IEA,ISO,ISS)
cytoplasmic vesicle  (IEA)
cytosol  (IEA,ISO,ISS)
nucleus  (IBA,IEA,ISO,ISS)
PML body  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Information Derived from GenBank Report RGD, Sept. 2003
6. TP53INP1s and homeodomain-interacting protein kinase-2 (HIPK2) are partners in regulating p53 activity. Tomasini R, etal., J Biol Chem 2003 Sep 26;278(39):37722-9. Epub 2003 Jul 7.
Additional References at PubMed
PMID:11557757   PMID:16044147   PMID:19118006   PMID:21339733   PMID:21965303   PMID:22421968   PMID:22470510   PMID:26589288   PMID:27105917   PMID:30193876  


Genomics

Comparative Map Data
Tp53inp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8529,051,267 - 29,069,486 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl529,051,264 - 29,069,484 (+)EnsemblGRCr8
mRatBN7.2524,253,986 - 24,272,250 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl524,260,568 - 24,267,968 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx526,442,178 - 26,460,439 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0528,035,197 - 28,053,458 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0527,836,039 - 27,854,314 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0524,402,895 - 24,419,651 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)Ensemblrn6Rnor6.0
Rnor_5.0529,128,794 - 29,144,271 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4525,008,253 - 25,014,263 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera523,480,259 - 23,486,276 (+)NCBICelera
RGSC_v3.1524,729,972 - 25,014,263 (+)NCBI
Cytogenetic Map5q13NCBI
TP53INP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38894,925,972 - 94,949,378 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl894,925,972 - 94,949,395 (-)Ensemblhg38GRCh38
GRCh37895,938,200 - 95,961,606 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36896,007,377 - 96,030,767 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34896,007,376 - 96,030,767NCBI
Celera892,123,395 - 92,146,810 (-)NCBICelera
Cytogenetic Map8q22.1NCBI
HuRef891,146,079 - 91,169,530 (-)NCBIHuRef
CHM1_1895,978,531 - 96,001,887 (-)NCBICHM1_1
T2T-CHM13v2.0896,050,944 - 96,074,374 (-)NCBIT2T-CHM13v2.0
Trp53inp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39411,156,441 - 11,174,379 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl411,156,431 - 11,174,379 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38411,156,441 - 11,174,379 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl411,156,431 - 11,174,379 (+)Ensemblmm10GRCm38
MGSCv37411,083,588 - 11,101,524 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36411,083,588 - 11,101,524 (+)NCBIMGSCv36mm8
Celera410,967,133 - 10,985,072 (+)NCBICelera
Cytogenetic Map4A1NCBI
cM Map45.03NCBI
Tp53inp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541711,067,715 - 11,073,635 (-)Ensembl
ChiLan1.0NW_00495541711,063,217 - 11,079,389 (-)NCBIChiLan1.0ChiLan1.0
TP53INP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27112,254,866 - 112,278,331 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1887,791,887 - 87,817,232 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0891,545,655 - 91,569,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1893,747,162 - 93,767,196 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl893,747,162 - 93,767,196 (-)EnsemblpanPan2panpan1.1
TP53INP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12939,575,782 - 39,593,389 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2939,580,496 - 39,593,518 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2939,737,342 - 39,755,264 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02939,779,940 - 39,797,257 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2939,781,168 - 39,790,256 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12939,805,773 - 39,819,363 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02939,787,781 - 39,805,733 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02940,229,451 - 40,247,160 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Tp53inp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530339,896,536 - 39,911,591 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365447,881,102 - 7,891,463 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365447,882,710 - 7,891,668 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TP53INP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl441,747,654 - 41,766,685 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1441,747,654 - 41,766,688 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2445,000,130 - 45,015,123 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TP53INP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1889,893,531 - 89,918,054 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl889,893,419 - 89,908,228 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603950,916,705 - 50,940,375 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tp53inp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247632,277,794 - 2,296,423 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247632,278,751 - 2,297,149 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Tp53inp1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11132,529,888 - 132,548,101 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Tp53inp1
139 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:45
Count of miRNA genes:40
Interacting mature miRNAs:45
Transcripts:ENSRNOT00000010591
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)51373115343590997Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)5692228281330203Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)52367149379046465Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5862723052665523Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51460607859606078Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51757663362576633Rat
1578774Tcas8Tongue tumor susceptibility QTL 83.47tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)51570745160707451Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906491770353Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5692228237468560Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5706553574335773Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51748608062486080Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906487027358Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52602321171023211Rat
2303577Gluco47Glucose level QTL 473blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51652001961520019Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)51748608062486080Rat
2313085Bss59Bone structure and strength QTL 592.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)5862723053627230Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)52367149368671493Rat

Markers in Region
RH142723  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2524,265,627 - 24,265,738 (+)MAPPERmRatBN7.2
Rnor_6.0524,414,549 - 24,414,659NCBIRnor6.0
Rnor_5.0529,140,461 - 29,140,571UniSTSRnor5.0
RGSC_v3.4525,011,924 - 25,012,034UniSTSRGSC3.4
Celera523,483,937 - 23,484,047UniSTS
RH 3.4 Map5142.0UniSTS
Cytogenetic Map5q13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000010591   ⟹   ENSRNOP00000010591
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl524,261,976 - 24,267,968 (+)Ensembl
Rnor_6.0 Ensembl524,410,863 - 24,416,888 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116994   ⟹   ENSRNOP00000092415
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl524,260,568 - 24,263,362 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000172896   ⟹   ENSRNOP00000105911
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl529,051,264 - 29,069,484 (+)Ensembl
RefSeq Acc Id: NM_181084   ⟹   NP_851598
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,051,267 - 29,069,486 (+)NCBI
mRatBN7.2524,254,035 - 24,272,250 (+)NCBI
Rnor_6.0524,410,871 - 24,416,888 (+)NCBI
Rnor_5.0529,128,794 - 29,144,271 (+)NCBI
RGSC_v3.4525,008,253 - 25,014,263 (+)RGD
Celera523,480,259 - 23,486,276 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008763529   ⟹   XP_008761751
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,064,922 (+)NCBI
mRatBN7.2524,253,986 - 24,267,681 (+)NCBI
Rnor_6.0524,402,907 - 24,416,550 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017593226   ⟹   XP_017448715
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,063,445 (+)NCBI
mRatBN7.2524,253,986 - 24,265,772 (+)NCBI
Rnor_6.0524,402,907 - 24,414,692 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063287281   ⟹   XP_063143351
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8529,059,281 - 29,061,231 (+)NCBI
Protein Sequences
Protein RefSeqs NP_851598 (Get FASTA)   NCBI Sequence Viewer  
  XP_008761751 (Get FASTA)   NCBI Sequence Viewer  
  XP_017448715 (Get FASTA)   NCBI Sequence Viewer  
  XP_063143351 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein BAC75468 (Get FASTA)   NCBI Sequence Viewer  
  EDM11672 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000105911
GenBank Protein Q80YE2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_851598   ⟸   NM_181084
- UniProtKB: Q80YE2 (UniProtKB/Swiss-Prot),   G3V708 (UniProtKB/TrEMBL),   A6JFS6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008761751   ⟸   XM_008763529
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017448715   ⟸   XM_017593226
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSRNOP00000010591   ⟸   ENSRNOT00000010591
Ensembl Acc Id: ENSRNOP00000092415   ⟸   ENSRNOT00000116994
RefSeq Acc Id: XP_063143351   ⟸   XM_063287281
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AHT6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000105911   ⟸   ENSRNOT00000172896

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80YE2-F1-model_v2 AlphaFold Q80YE2 1-239 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:631423 AgrOrtholog
BioCyc Gene G2FUF-41962 BioCyc
Ensembl Genes ENSRNOG00000007964 Ensembl
  ENSRNOG00000078269 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000172896 ENTREZGENE
InterPro TP53INP UniProtKB/Swiss-Prot
KEGG Report rno:297822 UniProtKB/Swiss-Prot
NCBI Gene 297822 ENTREZGENE
PANTHER PTHR31671 UniProtKB/Swiss-Prot
  PTHR31671:SF0 UniProtKB/Swiss-Prot
Pfam DOR UniProtKB/Swiss-Prot
PhenoGen Tp53inp1 PhenoGen
RatGTEx ENSRNOG00000007964 RatGTEx
  ENSRNOG00000078269 RatGTEx
UniProt A0A8I6AHT6 ENTREZGENE
  A0ABK0LVL3_RAT UniProtKB/TrEMBL
  A6JFS6 ENTREZGENE, UniProtKB/TrEMBL
  G3V708 ENTREZGENE
  Q80YE2 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-23 Tp53inp1  tumor protein p53 inducible nuclear protein 1  Trp53inp1  transformation related protein 53 inducible nuclear protein 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-02-11 Trp53inp1  transformation related protein 53 inducible nuclear protein 1  Stinp  stress induced protein  Symbol and Name updated to reflect Human and Mouse nomenclature 625702 APPROVED