Vac14 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 19 | 55,499,962 - 55,601,290 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 38,590,569 - 38,691,911 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 38,590,569 - 38,691,909 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 45,396,503 - 45,497,671 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 46,049,874 - 46,151,038 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 48,360,269 - 48,461,568 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 40,927,007 - 41,029,206 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 19 | 40,927,007 - 41,029,206 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 51,753,772 - 51,855,971 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 40,538,392 - 40,639,758 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 19 | 40,543,272 - 40,644,637 (+) | NCBI | | | | | Celera | 19 | 37,985,831 - 38,087,096 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q12 | NCBI | | | | |
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VAC14 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 16 | 70,687,439 - 70,801,158 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 70,687,439 - 70,801,160 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 70,721,342 - 70,835,061 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 69,278,843 - 69,392,562 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 69,278,844 - 69,392,562 | NCBI | | | | | Celera | 16 | 54,687,481 - 54,803,215 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | q22.1-q22.2 | NCBI | | | | | HuRef | 16 | 56,552,837 - 56,666,566 (-) | NCBI | | HuRef | | | CHM1_1 | 16 | 72,128,694 - 72,242,416 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 76,498,610 - 76,612,330 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Vac14 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 8 | 111,345,161 - 111,447,030 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 111,345,217 - 111,447,030 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 110,618,529 - 110,720,398 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 110,618,585 - 110,720,398 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 113,142,538 - 113,244,298 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 113,505,315 - 113,607,075 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 114,842,345 - 114,944,148 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | E1 | NCBI | | | | | cM Map | 8 | 57.59 | NCBI | | | | |
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Vac14 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955484 | 3,451,016 - 3,557,824 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955484 | 3,451,187 - 3,557,471 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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VAC14 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 18 | 83,365,110 - 83,478,896 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 89,298,744 - 89,412,522 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 54,216,303 - 54,330,073 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 70,520,440 - 70,634,152 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 16 | 70,520,440 - 70,634,143 (-) | Ensembl | panpan1.1 | | panPan2 | |
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VAC14 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 76,635,931 - 76,737,414 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 76,636,355 - 76,737,353 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 76,596,687 - 76,696,623 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 77,072,565 - 77,173,409 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 77,072,570 - 77,173,703 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 76,894,317 - 76,995,070 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 76,716,769 - 76,817,393 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 77,208,877 - 77,309,628 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Vac14 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024409349 | 36,644,434 - 36,746,811 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936475 | 22,842,248 - 22,944,690 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936475 | 22,842,333 - 22,944,680 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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VAC14 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 13,683,801 - 13,791,241 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 13,683,800 - 13,791,246 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 13,797,010 - 13,819,469 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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VAC14 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 5 | 53,829,168 - 53,944,178 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 53,828,117 - 53,944,136 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 16,641,321 - 16,756,343 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Vac14 (Heterocephalus glaber - naked mole-rat) |
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