Homez (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 15 | 32,292,897 - 32,309,564 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 15 | 32,291,048 - 32,321,319 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 15 | 28,321,633 - 28,339,486 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 15 | 28,320,819 - 28,339,745 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 15 | 30,168,594 - 30,185,186 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 15 | 31,315,797 - 31,332,388 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 15 | 29,558,507 - 29,575,080 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 15 | 33,510,454 - 33,528,018 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 15 | 33,510,458 - 33,527,031 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 15 | 37,397,304 - 37,414,288 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 15 | 32,948,644 - 32,965,217 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 15 | 27,901,063 - 27,917,633 (-) | NCBI | | Celera | | | RGSC_v3.1 | 15 | 32,965,463 - 32,967,005 (-) | NCBI | | | | | Cytogenetic Map | 15 | p13 | NCBI | | | | |
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HOMEZ (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 14 | 23,272,422 - 23,286,132 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 14 | 23,272,422 - 23,299,796 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 14 | 23,741,631 - 23,755,341 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 14 | 22,812,684 - 22,825,073 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 14 | 22,812,683 - 22,825,073 | NCBI | | | | | Celera | 14 | 3,605,546 - 3,618,011 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | q11.2 | NCBI | | | | | HuRef | 14 | 3,859,505 - 3,871,980 (-) | NCBI | | HuRef | | | CHM1_1 | 14 | 23,741,501 - 23,753,959 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 14 | 17,473,401 - 17,487,130 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Homez (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 14 | 55,090,193 - 55,109,285 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 55,090,193 - 55,108,418 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 14 | 54,852,736 - 54,871,728 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 54,852,736 - 54,870,961 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 14 | 55,471,573 - 55,482,995 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 53,806,941 - 53,814,695 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 52,655,769 - 52,667,042 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | C3 | NCBI | | | | | cM Map | 14 | 27.96 | NCBI | | | | |
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Homez (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955409 | 37,033,243 - 37,040,414 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955409 | 37,022,482 - 37,040,420 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HOMEZ (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 15 | 24,705,959 - 24,730,540 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 14 | 23,920,244 - 23,947,039 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 14 | 4,093,357 - 4,106,323 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 14 | 22,188,881 - 22,207,919 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 14 | 22,188,881 - 22,200,496 (-) | Ensembl | | | panPan2 | panpan1.1 |
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HOMEZ (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 8 | 3,545,434 - 3,558,923 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 8 | 3,545,472 - 3,558,440 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 8 | 3,493,849 - 3,507,225 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 8 | 3,653,503 - 3,666,677 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 8 | 3,653,495 - 3,661,567 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 8 | 3,344,901 - 3,358,290 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 8 | 3,406,222 - 3,419,603 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 8 | 3,668,362 - 3,681,536 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Homez (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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HOMEZ (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 7 | 75,789,185 - 75,798,026 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 75,789,184 - 75,798,027 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 80,943,563 - 80,957,739 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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HOMEZ (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 29 | 23,647,513 - 23,666,201 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 29 | 23,644,545 - 23,658,977 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666059 | 22,759,776 - 22,773,450 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Homez (Heterocephalus glaber - naked mole-rat) |
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Homez (Rattus rattus - black rat) |
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