Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ppm1g | Rat | schizophrenia | | ISS | Ppm1g (Mus musculus) | 13592920 | OMIM:181500 | MouseDO | | |
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Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ppm1g | Rat | schizophrenia | | ISS | Ppm1g (Mus musculus) | 13592920 | OMIM:181500 | MouseDO | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | FIN13, a novel growth factor-inducible serine-threonine phosphatase which can inhibit cell cycle progression. | Guthridge MA, etal., Mol Cell Biol 1997 Sep;17(9):5485-98. |
4. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
5. | GOA pipeline | RGD automated data pipeline |
6. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
7. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
8. | Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. | Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11. |
9. | ARC protects rat cardiomyocytes against oxidative stress through inhibition of caspase-2 mediated mitochondrial pathway. | Zhang YQ and Herman B, J Cell Biochem. 2006 Oct 1;99(2):575-88. |
Ppm1g (Rattus norvegicus - Norway rat) |
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PPM1G (Homo sapiens - human) |
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Ppm1g (Mus musculus - house mouse) |
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Ppm1g (Chinchilla lanigera - long-tailed chinchilla) |
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PPM1G (Pan paniscus - bonobo/pygmy chimpanzee) |
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PPM1G (Canis lupus familiaris - dog) |
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Ppm1g (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PPM1G (Sus scrofa - pig) |
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PPM1G (Chlorocebus sabaeus - green monkey) |
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Ppm1g (Heterocephalus glaber - naked mole-rat) |
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Variants in Ppm1g
55 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
Ppm1g |
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PPM1G_7857 |
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UniSTS:496035 |
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G54114 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_147209 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
GenBank Nucleotide | AF525687 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC062083 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473947 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000006 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000031842 ⟹ ENSRNOP00000029414 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_147209 ⟹ NP_671742 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_671742 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAH62083 | (Get FASTA) | NCBI Sequence Viewer |
AAM90993 | (Get FASTA) | NCBI Sequence Viewer | |
EDM02920 | (Get FASTA) | NCBI Sequence Viewer | |
EDM02921 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000029414.7 | ||
GenBank Protein | F1LNI5 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_671742 ⟸ NM_147209 |
- UniProtKB: | F1LNI5 (UniProtKB/Swiss-Prot), Q8K3W9 (UniProtKB/TrEMBL), A0A0H2UHT5 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000029414 ⟸ ENSRNOT00000031842 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-F1LNI5-F1-model_v2 | AlphaFold | F1LNI5 | 1-542 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13694439 | ||||||||
Promoter ID: | EPDNEW_R4964 | ||||||||
Type: | initiation region | ||||||||
Name: | Ppm1g_1 | ||||||||
Description: | protein phosphatase, Mg2+/Mn2+ dependent, 1G | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:628676 | AgrOrtholog |
BioCyc Gene | G2FUF-38352 | BioCyc |
Ensembl Genes | ENSRNOG00000026905 | Ensembl, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000031842.7 | UniProtKB/TrEMBL |
Gene3D-CATH | 3.60.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:5599833 | IMAGE-MGC_LOAD |
InterPro | PP2C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PP2C_BS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PPM-type_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PPM-type_phosphatase_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:259229 | UniProtKB/TrEMBL |
MGC_CLONE | MGC:72287 | IMAGE-MGC_LOAD |
NCBI Gene | 259229 | ENTREZGENE |
PANTHER | PROTEIN PHOSPHATASE 1G | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR13832 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | PP2C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Ppm1g | PhenoGen |
PROSITE | PPM_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PPM_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000026905 | RatGTEx |
SMART | PP2Cc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF81606 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A0H2UHT5 | ENTREZGENE |
A6HA65_RAT | UniProtKB/TrEMBL | |
A6HA66_RAT | UniProtKB/TrEMBL | |
F1LNI5 | ENTREZGENE, UniProtKB/Swiss-Prot | |
Q8K3W9 | ENTREZGENE, UniProtKB/TrEMBL | |
UniProt Secondary | A0A0H2UHT5 | UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2011-08-02 | Ppm1g | protein phosphatase, Mg2+/Mn2+ dependent, 1G | Ppm1g | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-02-23 | Ppm1g | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform | Ppm1g_predicted | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (predicted) | Data merged from RGD:1306082 | 737654 | APPROVED |
2005-01-12 | Ppm1g_predicted | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (predicted) | Symbol and Name status set to provisional | 70820 | PROVISIONAL | ||
2003-02-27 | Ppm1g | protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform | Symbol and Name status set to provisional | 70820 | PROVISIONAL |