Ppm1g (protein phosphatase, Mg2+/Mn2+ dependent, 1G) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Ppm1g (protein phosphatase, Mg2+/Mn2+ dependent, 1G) Rattus norvegicus
Analyze
Symbol: Ppm1g
Name: protein phosphatase, Mg2+/Mn2+ dependent, 1G
RGD ID: 628676
Description: Predicted to enable protein serine/threonine phosphatase activity. Predicted to act upstream of or within regulation of cell cycle. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Orthologous to human PPM1G (protein phosphatase, Mg2+/Mn2+ dependent 1G); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC366566; protein phosphatase 1G; protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,873,531 - 30,893,735 (+)NCBIGRCr8
mRatBN7.2625,153,556 - 25,173,763 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,153,556 - 25,173,761 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,454,397 - 25,474,600 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0625,770,290 - 25,790,493 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,249,656 - 25,269,625 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,517,840 - 26,537,292 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,517,840 - 26,537,290 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,336,359 - 36,355,555 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,145,569 - 25,149,811 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1625,148,980 - 25,152,355NCBI
Celera624,645,573 - 24,665,067 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
membrane  (IEA)
nucleoplasm  (IBA,IEA,ISO)
nucleus  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. FIN13, a novel growth factor-inducible serine-threonine phosphatase which can inhibit cell cycle progression. Guthridge MA, etal., Mol Cell Biol 1997 Sep;17(9):5485-98.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
9. ARC protects rat cardiomyocytes against oxidative stress through inhibition of caspase-2 mediated mitochondrial pathway. Zhang YQ and Herman B, J Cell Biochem. 2006 Oct 1;99(2):575-88.
Additional References at PubMed
PMID:20801214  


Genomics

Comparative Map Data
Ppm1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8630,873,531 - 30,893,735 (+)NCBIGRCr8
mRatBN7.2625,153,556 - 25,173,763 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,153,556 - 25,173,761 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,454,397 - 25,474,600 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0625,770,290 - 25,790,493 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,249,656 - 25,269,625 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,517,840 - 26,537,292 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,517,840 - 26,537,290 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,336,359 - 36,355,555 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,145,569 - 25,149,811 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1625,148,980 - 25,152,355NCBI
Celera624,645,573 - 24,665,067 (+)NCBICelera
Cytogenetic Map6q14NCBI
PPM1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,381,199 - 27,409,591 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,381,195 - 27,409,591 (-)EnsemblGRCh38hg38GRCh38
GRCh37227,604,066 - 27,632,458 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,457,565 - 27,486,000 (-)NCBINCBI36Build 36hg18NCBI36
Build 34227,515,712 - 27,544,147NCBI
Celera227,450,727 - 27,478,104 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,346,069 - 27,374,440 (-)NCBIHuRef
CHM1_1227,534,014 - 27,562,499 (-)NCBICHM1_1
T2T-CHM13v2.0227,423,594 - 27,451,985 (-)NCBIT2T-CHM13v2.0
Ppm1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,360,012 - 31,377,889 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,360,008 - 31,378,031 (-)EnsemblGRCm39 Ensembl
GRCm38531,202,668 - 31,220,545 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl531,202,664 - 31,220,687 (-)EnsemblGRCm38mm10GRCm38
MGSCv37531,505,041 - 31,522,918 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,479,249 - 31,497,126 (-)NCBIMGSCv36mm8
Celera528,681,717 - 28,699,620 (-)NCBICelera
Cytogenetic Map5B1NCBI
cM Map517.27NCBI
Ppm1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,344,968 - 9,350,125 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,344,968 - 9,350,123 (-)NCBIChiLan1.0ChiLan1.0
PPM1G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21299,098,418 - 99,129,448 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A99,102,386 - 99,133,411 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A27,385,072 - 27,413,475 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A27,473,480 - 27,502,384 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,473,480 - 27,502,384 (-)Ensemblpanpan1.1panPan2
PPM1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,336,319 - 21,356,278 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,336,604 - 21,356,283 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1721,228,084 - 21,248,046 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,657,649 - 21,677,648 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,657,652 - 21,677,623 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,344,295 - 21,364,251 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,354,011 - 21,374,011 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01721,402,010 - 21,421,995 (-)NCBIUU_Cfam_GSD_1.0
Ppm1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,636,528 - 65,656,720 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,182,818 - 5,203,072 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364935,182,829 - 5,203,037 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PPM1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,748,105 - 111,770,901 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,748,012 - 111,770,868 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23118,703,500 - 118,726,303 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PPM1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,205,359 - 80,230,391 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1480,205,458 - 80,230,424 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604531,921,834 - 31,947,912 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ppm1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247389,454,798 - 9,479,141 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ppm1g
55 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:68
Count of miRNA genes:55
Interacting mature miRNAs:65
Transcripts:ENSRNOT00000031842
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat

Markers in Region
Ppm1g  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,173,582 - 25,173,715 (+)MAPPERmRatBN7.2
Rnor_6.0626,537,112 - 26,537,244NCBIRnor6.0
Rnor_5.0636,355,375 - 36,355,507UniSTSRnor5.0
RGSC_v3.4625,149,631 - 25,149,763UniSTSRGSC3.4
Celera624,664,887 - 24,665,019UniSTS
Cytogenetic Map6q14UniSTS
PPM1G_7857  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,173,197 - 25,173,730 (+)MAPPERmRatBN7.2
Rnor_6.0626,536,727 - 26,537,259NCBIRnor6.0
Rnor_5.0636,354,990 - 36,355,522UniSTSRnor5.0
RGSC_v3.4625,149,246 - 25,149,778UniSTSRGSC3.4
Celera624,664,502 - 24,665,034UniSTS
Cytogenetic Map6q14UniSTS
UniSTS:496035  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,172,097 - 25,172,188 (+)MAPPERmRatBN7.2
Rnor_6.0626,535,627 - 26,535,717NCBIRnor6.0
Rnor_5.0636,353,890 - 36,353,980UniSTSRnor5.0
RGSC_v3.4625,148,146 - 25,148,236UniSTSRGSC3.4
Celera624,663,402 - 24,663,492UniSTS
Cytogenetic Map6q14UniSTS
G54114  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,173,438 - 25,173,602 (+)MAPPERmRatBN7.2
Rnor_6.0626,536,968 - 26,537,131NCBIRnor6.0
Rnor_5.0636,355,231 - 36,355,394UniSTSRnor5.0
RGSC_v3.4625,149,487 - 25,149,650UniSTSRGSC3.4
Celera624,664,743 - 24,664,906UniSTS
Cytogenetic Map6q14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 36 50 34 19 34 6 9 74 35 41 11 6
Low 7 7 7 7 2 2 2
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000031842   ⟹   ENSRNOP00000029414
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,153,556 - 25,173,761 (+)Ensembl
Rnor_6.0 Ensembl626,517,840 - 26,537,290 (+)Ensembl
RefSeq Acc Id: NM_147209   ⟹   NP_671742
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8630,873,531 - 30,893,735 (+)NCBI
mRatBN7.2625,153,556 - 25,173,763 (+)NCBI
Rnor_6.0626,517,840 - 26,537,292 (+)NCBI
Rnor_5.0636,336,359 - 36,355,555 (+)NCBI
RGSC_v3.4625,145,569 - 25,149,811 (+)RGD
Celera624,645,573 - 24,665,067 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_671742 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH62083 (Get FASTA)   NCBI Sequence Viewer  
  AAM90993 (Get FASTA)   NCBI Sequence Viewer  
  EDM02920 (Get FASTA)   NCBI Sequence Viewer  
  EDM02921 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000029414
  ENSRNOP00000029414.7
GenBank Protein F1LNI5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_671742   ⟸   NM_147209
- UniProtKB: F1LNI5 (UniProtKB/Swiss-Prot),   Q8K3W9 (UniProtKB/TrEMBL),   A0A0H2UHT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000029414   ⟸   ENSRNOT00000031842
Protein Domains
PPM-type phosphatase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LNI5-F1-model_v2 AlphaFold F1LNI5 1-542 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694439
Promoter ID:EPDNEW_R4964
Type:initiation region
Name:Ppm1g_1
Description:protein phosphatase, Mg2+/Mn2+ dependent, 1G
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0626,517,828 - 26,517,888EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:628676 AgrOrtholog
BioCyc Gene G2FUF-38352 BioCyc
Ensembl Genes ENSRNOG00000026905 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000031842 ENTREZGENE
  ENSRNOT00000031842.7 UniProtKB/TrEMBL
Gene3D-CATH 3.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:5599833 IMAGE-MGC_LOAD
InterPro PP2C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PP2C_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPM-type_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPM-type_phosphatase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:259229 UniProtKB/TrEMBL
MGC_CLONE MGC:72287 IMAGE-MGC_LOAD
NCBI Gene 259229 ENTREZGENE
PANTHER PROTEIN PHOSPHATASE 1G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13832 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PP2C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ppm1g PhenoGen
PROSITE PPM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PPM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000026905 RatGTEx
SMART PP2Cc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81606 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0H2UHT5 ENTREZGENE
  A6HA65_RAT UniProtKB/TrEMBL
  A6HA66_RAT UniProtKB/TrEMBL
  F1LNI5 ENTREZGENE, UniProtKB/Swiss-Prot
  Q8K3W9 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A0H2UHT5 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-08-02 Ppm1g  protein phosphatase, Mg2+/Mn2+ dependent, 1G  Ppm1g  protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-02-23 Ppm1g  protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform  Ppm1g_predicted  protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (predicted)  Data merged from RGD:1306082 737654 APPROVED
2005-01-12 Ppm1g_predicted  protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL
2003-02-27 Ppm1g  protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform      Symbol and Name status set to provisional 70820 PROVISIONAL