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Gene: Rnf38 (ring finger protein 38) Rattus norvegicus

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Symbol:

Rnf38

Name:

ring finger protein 38

RGD ID:

621856

Description:

Predicted to enable ubiquitin protein ligase activity. Involved in male gonad development. Located in sperm flagellum. Orthologous to human RNF38 (ring finger protein 38); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

E3 ubiquitin-protein ligase RNF38; MGC93195; Oip1; RING finger protein OIP1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RNF38 (ring finger protein 38)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Rnf38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rnf38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RNF38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	RNF38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rnf38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RNF38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RNF38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rnf38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Rnf38 (ring finger protein 38)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Rnf38 (ring finger protein 38)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	RNF38 (ring finger protein 38)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	rnf38 (ring finger protein 38)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	rnf38 (ring finger protein 38)	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	mura	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	rnf38	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	rnf38	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	63,154,507 - 63,263,138 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	63,154,507 - 63,263,137 (-)	Ensembl				GRCr8
mRatBN7.2	5	58,358,771 - 58,467,424 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	58,361,976 - 58,467,446 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	60,340,445 - 60,449,173 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	62,159,254 - 62,267,981 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	62,128,864 - 62,237,714 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	59,604,783 - 59,713,108 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	59,607,476 - 59,647,633 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	60,600,918 - 60,631,312 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	56,940,197 - 56,970,567 (-)	NCBI		Celera
RGSC_v3.1	5	60,601,097 - 60,631,491 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17beta-estradiol (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

choline (ISO)

clofibrate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

decabromodiphenyl ether (EXP)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

doxycycline (ISO)

endosulfan (ISO)

epoxiconazole (ISO)

erastin (ISO)

ethanol (ISO)

flavonoids (EXP)

folic acid (ISO)

formaldehyde (ISO)

furan (EXP)

gentamycin (EXP)

GSK-J4 (ISO)

isotretinoin (ISO)

L-methionine (ISO)

lead diacetate (ISO)

lead(0) (ISO)

N-ethyl-N-nitrosourea (ISO)

N-nitrosodiethylamine (EXP)

paracetamol (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

rac-lactic acid (ISO)

sodium arsenite (ISO)

succimer (ISO)

sunitinib (ISO)

testosterone (ISO)

thiram (ISO)

titanium dioxide (ISO)

Triptolide (ISO)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

male gonad development (IEP)

protein ubiquitination (IBA,IEA,ISO)

spermatid development (NAS)

Cellular Component

nucleoplasm (IEA,ISO)

nucleus (IEA,ISO)

sperm flagellum (IDA)

Molecular Function

metal ion binding (IEA)

protein binding (IPI,ISO)

ubiquitin protein ligase activity (IBA,IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
3.	GOA pipeline	RGD automated data pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Novel RING finger protein OIP1 binds to conserved amino acid repeats in sperm tail protein ODF1.	Zarsky HA, etal., Biol Reprod 2003 Feb;68(2):543-52.

Additional References at PubMed

PMID:12477932	PMID:23973461

Genomics

Comparative Map Data

Rnf38
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	63,154,507 - 63,263,138 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	63,154,507 - 63,263,137 (-)	Ensembl				GRCr8
mRatBN7.2	5	58,358,771 - 58,467,424 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	58,361,976 - 58,467,446 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	60,340,445 - 60,449,173 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	62,159,254 - 62,267,981 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	62,128,864 - 62,237,714 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	59,604,783 - 59,713,108 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	59,607,476 - 59,647,633 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	60,600,918 - 60,631,312 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	56,940,197 - 56,970,567 (-)	NCBI		Celera
RGSC_v3.1	5	60,601,097 - 60,631,491 (-)	NCBI
Cytogenetic Map	5	q22	NCBI

RNF38
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	36,336,400 - 36,487,669 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	36,336,396 - 36,487,548 (-)	Ensembl			hg38	GRCh38
GRCh37	9	36,336,397 - 36,401,203 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	36,326,397 - 36,391,195 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	36,326,392 - 36,391,195	NCBI
Celera	9	36,269,750 - 36,334,476 (-)	NCBI		Celera
Cytogenetic Map	9	p13.2	NCBI
HuRef	9	36,289,333 - 36,353,868 (-)	NCBI		HuRef
CHM1_1	9	36,336,870 - 36,401,614 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	36,358,438 - 36,510,372 (-)	NCBI		T2T-CHM13v2.0

Rnf38
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	44,126,210 - 44,233,929 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	44,126,210 - 44,233,789 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	44,126,210 - 44,233,905 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	44,126,210 - 44,233,789 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	44,139,084 - 44,181,155 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	44,147,310 - 44,189,439 (-)	NCBI		MGSCv36	mm8
Celera	4	44,147,772 - 44,189,740 (-)	NCBI		Celera
Cytogenetic Map	4	B1	NCBI
cM Map	4	23.13	NCBI

Rnf38
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955419	29,993,358 - 30,063,705 (+)	Ensembl
ChiLan1.0	NW_004955419	29,903,917 - 30,063,705 (+)	NCBI	ChiLan1.0	ChiLan1.0

RNF38
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	88,103,381 - 88,254,027 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	88,109,329 - 88,259,965 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	36,185,284 - 36,335,915 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	36,985,427 - 37,134,188 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	36,985,433 - 37,048,013 (-)	Ensembl			panPan2	panpan1.1

RNF38
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	52,764,216 - 52,827,993 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	52,764,220 - 52,901,983 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	51,353,757 - 51,418,498 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	53,869,281 - 53,934,174 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	53,867,413 - 54,009,221 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	52,372,060 - 52,436,928 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	52,398,903 - 52,463,465 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	53,095,921 - 53,160,628 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Rnf38
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	167,736,927 - 167,790,157 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	4,281,224 - 4,337,733 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	4,281,124 - 4,359,378 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RNF38
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	237,111,012 - 237,235,485 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	237,111,002 - 237,240,311 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	264,874,672 - 265,047,458 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RNF38
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	44,083,814 - 44,224,206 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	44,185,500 - 44,225,491 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	41,170,221 - 41,312,770 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rnf38
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624930	40,652 - 84,228 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624930	37,327 - 180,038 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Rnf38
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	2,279,432 - 2,386,938 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Rnf38
877 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	145
Count of miRNA genes:	111
Interacting mature miRNAs:	118
Transcripts:	ENSRNOT00000060203
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578776	Stresp18	Stress response QTL 18	2.9		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	5	32751649	77751649	Rat
1298067	Scl15	Serum cholesterol level QTL 15	4.8	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	38011670	83011670	Rat
1300115	Hrtrt7	Heart rate QTL 7	2.76		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	5	52665372	94894052	Rat
6907115	Mcs29	Mammary carcinoma susceptibility QTL 29			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	38004331	83004331	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
1358353	Srcrtb2	Stress Responsive Cort Basal QTL 2	3.48	0.003	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	23671493	79046465	Rat
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	38207390	136631402	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	48523123	134369373	Rat
1598807	Glom12	Glomerulus QTL 12	2.7		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	5	38011670	83011670	Rat
1302786	Kidm8	Kidney mass QTL 8	28.15		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	38011670	83011670	Rat
1331782	Rf36	Renal function QTL 36	3.296		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	39019942	102105896	Rat
6903292	Stl28	Serum triglyceride level QTL 28	2.6	0.0073	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	5	33311673	78311673	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
1578767	Stresp17	Stress response QTL 17	4.3	0.01	blood aldosterone amount (VT:0005346)	plasma aldosterone level (CMO:0000551)	5	32751649	77751649	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	39985948	84985948	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	6922282	81330203	Rat
6903306	Scl35	Serum cholesterol QTL 35	2.6	0.0073	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	33311673	78311673	Rat
1576317	Eutr2	Estrogen induced uterine response QTL 2		0.01	uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	39526924	84526924	Rat
1331773	Scl26	Serum cholesterol level QTL 26	3.065		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	48523123	91770353	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	60601597	137492949	Rat
1331771	Rf35	Renal function QTL 35	4.36965		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	91770353	Rat
61359	Eaex	Experimental allergic encephalomyelitis QTL x	3		nervous system integrity trait (VT:0010566)	post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)	5	60511627	105511627	Rat
8662454	Vetf3	Vascular elastic tissue fragility QTL 3	27.4		artery integrity trait (VT:0010639)	number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)	5	7065535	74335773	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	36460764	136631402	Rat
1331756	Rf34	Renal function QTL 34	4.16275		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal blood flow rate (CMO:0001168)	5	10019064	87027358	Rat
8552954	Pigfal14	Plasma insulin-like growth factor 1 level QTL 14	9		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	26023211	71023211	Rat
2316959	Gluco59	Glucose level QTL 59	4.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	56546393	101546393	Rat
1600358	Mamtr5	Mammary tumor resistance QTL 5			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	23671493	68671493	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_134467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008763668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC127935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF480444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC083548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000060203 ⟹ ENSRNOP00000056951

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	63,154,507 - 63,196,688 (-)	Ensembl
mRatBN7.2 Ensembl	5	58,361,976 - 58,392,372 (-)	Ensembl
Rnor_6.0 Ensembl	5	59,607,992 - 59,638,385 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000077367 ⟹ ENSRNOP00000074615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	63,154,507 - 63,263,137 (-)	Ensembl
mRatBN7.2 Ensembl	5	58,361,976 - 58,467,446 (-)	Ensembl
Rnor_6.0 Ensembl	5	59,607,476 - 59,638,492 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091944 ⟹ ENSRNOP00000072089

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	63,154,507 - 63,263,137 (-)	Ensembl
mRatBN7.2 Ensembl	5	58,361,976 - 58,467,446 (-)	Ensembl
Rnor_6.0 Ensembl	5	59,608,035 - 59,647,633 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000097803 ⟹ ENSRNOP00000076514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	58,361,976 - 58,401,512 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108875 ⟹ ENSRNOP00000077297

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	58,361,976 - 58,393,772 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109519 ⟹ ENSRNOP00000080724

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	63,154,507 - 63,197,175 (-)	Ensembl
mRatBN7.2 Ensembl	5	58,361,976 - 58,401,512 (-)	Ensembl

RefSeq Acc Id:

NM_134467 ⟹ NP_604462

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,137 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,467,420 (-)	NCBI
Rnor_6.0	5	59,607,991 - 59,638,385 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI
RGSC_v3.4	5	60,600,918 - 60,631,312 (-)	RGD
Celera	5	56,940,197 - 56,970,567 (-)	RGD

Sequence:

show sequence

CTACCATTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGCCCCATCTGGTAATTCAGTGGTT
TTTGGAGTTTGATTCTATCTAGCAGCACCGAGTGTCACTGGGAATCTCAGATCACAAGTAGCNA
TTCTTACTGGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTTGAT
TATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGC
AGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTGCACG
CAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAAT
TCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGGAAC
CTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACCCCA
GCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCCTAC
ACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTTGCA
GTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGT
GCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTCCCA
CCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTCCTC
ACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAGAG
GATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCCCCT
TCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTTTGC
ATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGACGTAG
CAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATATGTG
TTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGGAAG
ATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAAACC
TCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTTTTACAGGTTCAACCCTAGCAACCAC
CAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGAG
TCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCGTAC
TTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAAGAG
CACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAACCTG
TGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTA
ATCAACTATAAAAGCTTACAATTAGTCTTCAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006238012 ⟹ XP_006238074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,828 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,037 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,646,904 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

TGATGATGTCACTTGGGAGAACTCAGAACCCGGTTGGAGGGGTCCCCTCTCGCGGCCTCCTACC
TCCGCGGGTTTCTGGACAGGCTCCGTTTTGTTCTCAGTGGATGGAAGTTCTTCCTTTCAGGGCT
GAAGAATGAGAGAGATATCTCCCGGGGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGGT
GATTTGTGAAAGGGTGAGACTTCCGAGCCTGTTCCCTCTCCTCCCAAGTGATCAGGACACTACC
ATTCAAGAGGATGCTCACTTCAAAGCTTTCTTCCAGAGTGAAGATAGTCCAAGTCCTAAGAGAC
AGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCG
ACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCA
GGGGAACGATGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAA
GAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTA
TGCACAACAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTG
TTACATCCAGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCC
ATCAAGGAACAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTG
CACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGT
GGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACT
TGCCAGTACCATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCC
TCATCTTTCTCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACA
CAGCAGTCACGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTC
AAGTAGGCAGTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTT
GCAGTTCCTGACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTT
ATGCCTCGGAGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCT
ACCATCCCAGCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAAC
CTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTG
GCAGAGAGACTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTT
CTTACAGGTTCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGA
TTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTT
GATAAATGGCTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACC
GGGATTCAGAGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATAT
ATGGACTATCCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATG
GACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTAT
GGGATTGTTATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGT
GTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGAC
GTGATCTTTTAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTA
TATAGAGCCTTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAA
TCTGTGAGCGAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGAT
CCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTG
GTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACT
GATTGCTAAGGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAA
TGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAA
ATGGGTCACTTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTT
GTAAAAGAGACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCA
TCATTAGCAATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTA
GTAGCTTCTTACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGA
TGTTTGAGTAATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACT
GGAGCAAAATCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCA
TGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCC
AGGCCTGAGGTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGA
TCAGTGCTGTGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTA
ATTTATGTTAGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAA
GATTGGATTTTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAA
TGATACATAGCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTG
AGGTCATCTTTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGT
GAGTTGTCAGCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACC
TTGCTGCCGACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGT
TCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACA
CAGAAGCACAATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTT
AATCAACATTCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAA
TGCACATGTTACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTG
TTAAATACCAAAATTATTGACATATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTA
TTTTTTAATTTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATA
TATCTTCAAAAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGT
CGATGCACAGGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTGC
TCACGACTGGAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGT
AAGAGGTAGTTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATG
ACTGCCTGTCTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGAC
GGGTGAGGCTGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTA
GCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGC
CTCATCCTCTGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTA
GCCCAGCTGTGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTT
TTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTT
TTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGA
ATCACGATATTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATAT
CAGGATGTCCTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAAT
GTAATTTGCTAACATTATTAAATTTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGC
CTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCA
TCTGCTTACCTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAAT
CATTTGCTGAGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTAT
GTATTATAAATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTAC
ATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCC
CTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACAT
A

hide sequence

RefSeq Acc Id:

XM_006238014 ⟹ XP_006238076

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,802 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,037 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,646,904 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

TGATGATGTCACTTGGGAGAACTCAGAACCCGGTTGGAGGGGTCCCCTCTCGCGGCCTCCTACC
TCCGCGGGTTTCTGGACAGGCTCCGTTTTGTTCTCAGTGGATGGAAGTTCTTCCTTTCAGGGCT
GAAGAATGAGAGAGATATCTCCCGGGGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGAG
TGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCA
TCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAG
TTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTGCACGCAACAGGAGAAG
TCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAA
GATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGGAACCTCGAGCCTTCC
ACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACCCCAGCAGAATGCAGT
CATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCCTACACTGTAACCACA
GTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGG
TCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAAT
GCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTCCCACCCCTCATTTCT
AGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTCCTCACTTGCCACCAC
CAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAGAGGATAGAAAATGA
AGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCCCCTTCGGCCCACCCC
CCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTTTGCATCAGGAGGTGT
CCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGACGTAGCAGATACCGATC
CCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATATGTGTTATCAATGCTT
CCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTTG
AAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAAACCTCGGGGACTGAC
TAAAGCGGATATTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAACCACCAGTCAGAGCAG
ACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCCTGTA
ACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCGTACTTGCCCAATTTG
CCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAAGAGCACAGATTTAGT
TTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAACCTGTGTGGCTTCCAG
CCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAA
AGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACTGTGTGATTGGAACTCCAAAG
ACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCG
AGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTTATAAAAAGTGGTAGC
TCCAGATGACATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGAACTGAGTGCA
GCGGACGACTGCTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAACTACATGTGTGGGGGCA
TGGTAGCTACTGTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTT
TTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTT
TTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATTCTAAGCATTGAATACT
CCATCCCCTCCCTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCAGCTGT
TCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTCAGATTCTCGCTCCATG
ACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCAACTTGCTATTTCCAAA
AAGAAGGTGCAATATCATATTCATCATCATTAGCAATATTAGCATTTCAATCAGTGATCTGATG
TTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACCTGTGTTTTTATTAATG
TGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATAAACACCACTGGTCCTG
TAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAACTCAGCCTGGCTTCTA
GTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTTTCTGT
TAGTGTTGATTGAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTTCCCTCAGTAACATTCT
CACTGAAACCTTTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTTCGTAGGCCTGGTTTGC
TTTGACGTCTTACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAGCTTAATACAACAGGTG
CCCAGAATACTTGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAAATAATGCTGTCAAACA
GGAACTGACCTTTATTTAATCTGAAATGATACATAGCTGTGTGTATATATTTTTAAAAATAGGT
TCATTGAACATAAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTGGGTTCCTTTCTCCTCA
GTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGCCACACAGACTGCAGCC
TTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCTCTCATGCAGGGACTGT
GTTCAACCACTTGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTCACAGC
CTAGAGTTCAGGAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCTTCCAGACACTGTTGCC
TCTATCTAGTTAGACAAATAGGATTTAATCAACATTCTGTTGCCCCTAGATTTGTGTTAGTGTG
TCAGAAATACTTAAACAGTGGTAAAATGCACATGTTACTTTTAAATCATTAGGATAACCCCTGT
CTGGTTCCTAATGAATAAAAGGTGTGTTAAATACCAAAATTATTGACATATATACTAATCAGCT
CCAAATCACATACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCATGTTTAAGATGGTAAAA
GCCCATCTTATATATAGACTTTTATATATCTTCAAAAACTTTGTACCTGTACAGCTCTAACAAC
ACTGCTCCTCTCAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTTCCTAACTACTGCAGAC
AGACTGACTACCAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTTCAATGTTTGCCATAAA
GTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGGGGGCATCTGGGTCTGT
CCTGGTAAAACCCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGTCTCGGCACAGAGCTTT
TGTGACGTGCAGACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCACACTTGGATGTGGTTC
CCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGGAGATG
CACCAGGCCACAGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAACTCTGTGCTCTAGAACT
CTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTATGATTTGAATTTGAGT
TTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTTTGGGG
GTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGGTTTTT
GTTTTGTTTTGTTTTTGTTTTCATGAATCACGATATTTTGTACTTTTAAAAGCTCCAACCTCCA
CAAAACAACTCAAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTTTTTAGCAGAATCTGAA
ATTTGATTTTATACGCTCCCTGAAATGTAATTTGCTAACATTATTAAATTTGGGCCTCTTGTGA
TAATCACATACAATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCCAGGCC
TCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCTTTGTTTCAGATTATGA
AAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATATTCCATTGT
GTCAGTTAACATAGTTTTAAATGTATGTATTATAAATATCTGTAACCAAAATCATTTGAAGGCT
TGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTA
GTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAAT
AAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_006238015 ⟹ XP_006238077

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,197,182 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,037 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,646,904 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

TGATGATGTCACTTGGGAGAACTCAGAACCCGGTTGGAGGGGTCCCCTCTCGCGGCCTCCTACC
TCCGCGGGTTTCTGGACAGGCTCCGTTTTGTTCTCAGTGGATGGAAGTTCTTCCTTTCAGGGCT
GAAGAATGAGAGAGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTT
TGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAAT
AGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTG
CACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACA
TAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAG
GAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCAC
CCCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTC
CTACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCT
TGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTA
GTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTT
CCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCT
CCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGC
AGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCC
CCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCT
TTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGAC
GTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATA
TGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTG
GAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGA
AACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAA
CCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTT
AGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATC
GTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTA
AGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAA
CCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGA
CTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACTGTGT
GATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTT
TTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTT
TATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTG
AGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAAC
TACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATACCAGCATGTACCAA
GAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTA
GTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATT
CTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTT
TGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTC
AGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCA
ACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCAATATTAGCATTTC
AATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACC
TGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATA
AACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAA
CTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGG
AACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTT
CCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTT
CGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAG
CTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAA
ATAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAATGATACATAGCTGTGTGTATAT
ATTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTG
GGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGC
CACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCT
CTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCT
CTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCT
TCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACATTCTGTTGCCCCTA
GATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGTTACTTTTAAATCA
TTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACCAAAATTATTGACA
TATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCAT
GTTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAAAAACTTTGTACCT
GTACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTT
CCTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTT
CAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGG
GGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGT
CTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCA
CACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAG
CTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAAC
TCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTA
TGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTT
TTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGG
GGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATATTTTGTACTTTTA
AAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTT
TTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGCTAACATTATTAAA
TTTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTC
CCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCT
TTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCA
AATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAAATATCTGTAACCA
AAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGT
AATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGA
GAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_006238016 ⟹ XP_006238078

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,923 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,537 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,647,546 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

AACTCAGATGAGGAAGTCTCTCGGGTTTTATCGGAAGCCTAGCGCTCTGGGTTTCGCCTGCGCG
CGCAGCGCAATCTACTGCGCCGGCGCGGCCCGCGCTAGTCTTCGAGCGCTGAGAAGGGGTGCAG
TGGGGTGGACTGGGGCGGGGCCCCCTCGTGCGGCTGGCGGGCGGGCCTCCGGAGGCCGGGGCGG
TTGGGACGGCAGGCGCAAAAGATGGGGCCTCCGAGAAGCTAGCCAGCTCCTTTAGCGCCGGGCG
TGGAGCCGTGGTTTTCTGGAGAGGCCCGTGTGATGGTGCCAAGAGGAAGGAAGCGCCTTGACAG
CGCCTCAGTCGGAACCCGAGTTCCGAGGGCAAGGACGATCGGGGACGGCGGCCCTGGCGAGCTG
GCCGCCGGCAGGGCGAGCAGTCACAATAGGAGGCGGCGGCCCGGCCCGGAGCGGTGGGAGCAGC
CCCGCAGGGCGGAGCCTCCCCTCGCAGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCT
CTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGA
GATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGA
TGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAAC
GTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACA
GCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCA
GCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAA
CAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCA
GCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCAC
CTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTAC
CATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTC
TCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCA
CGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCA
GTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCT
GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGG
AGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCA
GCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTT
TGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGA
CTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGT
TCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTC
AAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGG
CTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAG
AGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTAT
CCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCT
TTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTT
ATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAA
CATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTT
TAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCC
TTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGC
GAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATAC
CAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTAT
TTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAA
GGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAG
AAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCAC
TTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAG
ACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCA
ATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCT
TACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGT
AATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAA
TCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCG
GTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAG
GTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTG
TGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTT
AGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATT
TTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAATGATACATA
GCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCT
TTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCA
GCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCG
ACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTC
CCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCAC
AATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACAT
TCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGT
TACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACC
AAAATTATTGACATATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAAT
TTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAA
AAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACA
GGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTG
GAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAG
TTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGT
CTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGC
TGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGA
TGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTC
TGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTG
TGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTT
TTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTG
TGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATA
TTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTC
CTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGC
TAACATTATTAAATTTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCT
TCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTAC
CTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTG
AGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAA
ATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTAT
GAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCA
ATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_006238017 ⟹ XP_006238079

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,197,514 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,402,325 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,648,837 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

TGGTCTAAGAGTGAGTTGGGGGTGGGGGGCAAAGACAAGAGGAAGCTCCATAGTGGGAGTGTAG
AACTGAGGCGAGGGAACATTGCATAGGGATCTACTGTCTTTTTCCAGCTTCCCTTAGGGTTAGA
ATTGTAGGAGAATTGCTAGAACTTTGCTTCAGCAGTTGCTAGGCACCTTTAAGAGTGAACCTTG
AAATTAGTCACAATAGAGCAGTGGCGCTCAGTCTGATACTGGTTGACAAATGTACATGATTACC
ATATGGGTCTTTCATAAACAGAATGTATATGATCCAAAAAGATTCTGAAACATTTTGTGTTGCT
TTTCTTACCCGAGGCCACTGACCCAGAGAAGGAGGGAAGGGTTAAGCCCTCTGAAGGTAGAGTC
TGGGCTCCATTGCTTTACCTTCTGTCCTCTTAACCCCTCCCCCTTCCTGTTTATTCTTACCCTC
CTCCTACCCCCACCTTCTTTCTACGACCCAAGGTTTTTAGACCGGGTTTTAATACAGTAGCCTA
GGAGGACCTCAAGCTCCCAGAAGTCCTTTTTCTCAGCCTTCCCAGGCTTTGAGCCTACCATGCT
CTGCTCAGCCTGGGTTTTCTGCTCATCGATCCTTTAACATTTAATAAACTTTAAAAGAAACTTC
TAATTTCTATCCACTCAAAAAGCCTATCCTTCCATAATTCCTAATGGTATTGAACAACTCCTTT
CCTTGTATTTATTGATCTAGTATAGGGTTTGTATTCTCTATTGGATCTCGAACTCAGTAGTGAG
CCAAGGCTTTATTTACTATTTAAACTTCAACTTATCTCAGAAAAGTCAGAGAATTTGTCACAAT
CGTCCTGGGGGTTGGACAAATTAGATACAAGCCTGCTTGCCCTGTTTTGAGACCCAAGTGTGTG
CGTCAGTAAAAATTCCTACTTCTTCGGTCATATAAATGCATACATACTATATTGTGAGGTTTAC
TGCTTTACCGCTGAGTTTTTGAGTTGCTGGCGGGAGCAGAAGCTGCCGCAGCGTTAGGCACTCC
CTGCGTTGGAAGACGCTGCCCCACCTCCCCACTTCCCCACCTTTGCTGCCTGCGCTAGCCAAGC
GAGTGAGCTGGGCGGGGCTGCGCAGGGGCGCTGCGCACCGGCTCTGTTGCCGGAACTGGCCCGA
GCGGCCTGGACGTGCGCGGCCCCGCCCCCGCGGGTGGAAACAAAGGGGGCTCGGCGCGGGGGAA
AGAGGCGGAGCTCTCCGGCGATCCTGCGCTTGGCTGGCTAGAGTGAAGATAGTCCAAGTCCTAA
GAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCCTCACCACCA
ATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACT
TCTCAGGGGAACGATGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCG
AGGAAGAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTC
CCTTATGCACAACAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCC
GTCTGTTACATCCAGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACATACATGACCA
GCTCCATCAAGGAACAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCATGGGATTCCT
CTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTT
TCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCA
GCACTTGCCAGTACCATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACAT
CCTCCTCATCTTTCTCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCC
AAACACAGCAGTCACGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACA
TCTTCAAGTAGGCAGTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCT
CCTTTGCAGTTCCTGACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCAC
CATTTATGCCTCGGAGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCC
TACCTACCATCCCAGCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGC
CCAACCTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAA
ACCTGGCAGAGAGACTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATATTGAACAGCT
CCCTTCTTACAGGTTCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATG
TGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGT
GTGTTGATAAATGGCTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGT
GCACCGGGATTCAGAGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATG
TATATATGGACTATCCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGT
CAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACA
ATTATGGGATTGTTATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTT
TGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAG
TGGACGTGATCTTTTAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTA
CCTTATATAGAGCCTTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCA
GTGAATCTGTGAGCGAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGT
GAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATA
ATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGC
ACACTGATTGCTAAGGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCA
ATGAATGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGAT
CCTAAATGGGTCACTTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTT
CTTTTGTAAAAGAGACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATT
CATCATCATTAGCAATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTTTCCTTTACAT
TTCTAGTAGCTTCTTACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCT
GAAGATGTTTGAGTAATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTT
CCACTGGAGCAAAATCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGC
CCCCATGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACAC
ACTCCAGGCCTGAGGTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGG
ACGGATCAGTGCTGTGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTC
TTTTAATTTATGTTAGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAA
ATGAAGATTGGATTTTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCTTTATTTAATC
TGAAATGATACATAGCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACATAAATCAGATT
GTTTGAGGTCATCTTTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCC
TCTGTGAGTTGTCAGCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTG
ACACCTTGCTGCCGACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCC
GTGGTTCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAAT
CCACACAGAAGCACAATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAG
GATTTAATCAACATTCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGG
TAAAATGCACATGTTACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAG
GTGTGTTAAATACCAAAATTATTGACATATATACTAATCAGCTCCAAATCACATACAGTTTAAT
CTTTATTTTTTAATTTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTATATATAGACTT
TTATATATCTTCAAAAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCTCAGTATTCAT
CCTGTCGATGCACAGGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTACCAAGGCACAC
TGTGCTCACGACTGGAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGT
TTTGTAAGAGGTAGTTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGC
AGATGACTGCCTGTCTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCA
TGGACGGGTGAGGCTGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCAT
CTCTAGCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCG
GCAGCCTCATCCTCTGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTG
GCTTAGCCCAGCTGTGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGT
TTTTTTTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTG
GTTTTTTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTT
CATGAATCACGATATTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCA
AATATCAGGATGTCCTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCT
GAAATGTAATTTGCTAACATTATTAAATTTGGGCCTCTTGTGATAATCACATACAATCTGCCTG
CCTGCCTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACC
GTGCATCTGCTTACCTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTT
GGAATCATTTGCTGAGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACATAGTTTTAAA
TGTATGTATTATAAATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTT
TGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTT
AATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAA
AACATA

hide sequence

RefSeq Acc Id:

XM_006238018 ⟹ XP_006238080

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,975 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,239 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,647,252 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

CCAAGAGGAAGGAAGCGCCTTGACAGCGCCTCAGTCGGAACCCGAGTTCCGAGGGCAAGGACGA
TCGGGGACGGCGGCCCTGGCGAGCTGGCCGCCGGCAGGGCGAGCAGTCACAATAGGAGGCGGCG
GCCCGGCCCGGAGCGGTGGGAGCAGCCCCGCAGGGCGGAGCCTCCCCTCGCAGATATCTCCCGG
GGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGGTGATTTGTGAAAGGGTGAGACTTCCG
AGCCTGTTCCCTCTCCTCCCAAGTGATCAGGACACTACCATTCAAGAGGATGCTCACTTCAAAG
CTTTCTTCCAGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTTGA
TTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGG
CAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTGCAC
GCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAA
TTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGGAA
CCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACCCC
AGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCCTA
CACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTTGC
AGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTG
TGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTCCC
ACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTCCT
CACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAGA
GGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCCCC
TTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTTTG
CATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGACGTA
GCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATATGT
GTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGGAA
GATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAAAC
CTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAACCA
CCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGA
GTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCGTA
CTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAAGA
GCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAACCT
GTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTT
AATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACTGTGTGAT
TGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTG
TGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTTAT
AAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGT
GGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAACTAC
ATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAA
TGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTA
CTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATTCTA
AGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTTTGC
TTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTCAGA
TTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCAACT
TGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCAATATTAGCATTTCAAT
CAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACCTGT
GTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATAAAC
ACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAACTC
AGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGGAAC
TGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTTCCC
TCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTTCGT
AGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAGCTT
AATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAAATA
ATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAATGATACATAGCTGTGTGTATATATT
TTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTGGGT
TCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGCCAC
ACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCTCTC
ATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCTCTA
AGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCTTCC
AGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACATTCTGTTGCCCCTAGAT
TTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGTTACTTTTAAATCATTA
GGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACCAAAATTATTGACATAT
ATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCATGTT
TAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAAAAACTTTGTACCTGTA
CAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTTCCT
AACTACTGCAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTTCAA
TGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGGGGG
CATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGTCTC
GGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCACAC
TTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAGCTG
TCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAACTCT
GTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTATGA
TTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTTTTA
TTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGGGGG
TGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATATTTTGTACTTTTAAAA
GCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTTTTT
AGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGCTAACATTATTAAATTT
GGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTCCCA
GCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCTTTG
TTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCAAAT
CATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAAATATCTGTAACCAAAA
TCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAAT
GCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAG
GGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_006238020 ⟹ XP_006238082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,133 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,467,418 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,713,108 (-)	NCBI
Rnor_5.0	5	64,128,873 - 64,235,392 (-)	NCBI

Sequence:

show sequence

GCGGGTCTCTTCGGAGCGGGGCGCAGGGTGTCGGTGCCTGCGGCAGAGCGCCCGGAGCAGGTAG
TGTTGGTGCTTCTTTTCAGTGCCAGTCCATCCATCACGACCACATTTGTCATGATGACAGTGAC
AAGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACAT
CAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCC
TTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTGCACGCAACAGG
AGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAATTCCATTA
GTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGGAACCTCGAGC
CTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACCCCAGCAGAAT
GCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCCTACACTGTAA
CCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACA
ACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCT
CCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTCCCACCCCTCA
TTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTCCTCACTTGCC
ACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAGAGGATAGAA
AATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCCCCTTCGGCCC
ACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTTTGCATCAGGA
GGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGACGTAGCAGATAC
CGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATATGTGTTATCAA
TGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGGAAGATGGAGA
AGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAAACCTCGGGGA
CTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAACCACCAGTCAG
AGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACC
CTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCGTACTTGCCCA
ATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAAGAGCACAGAT
TTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAACCTGTGTGGCT
TCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACT
ATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACTGTGTGATTGGAACTC
CAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCA
TTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTTATAAAAAGTG
GTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGAACTGA
GTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAACTACATGTGTGG
GGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTG
TAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACAC
TGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATTCTAAGCATTGA
ATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCA
GCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTCAGATTCTCGCT
CCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCAACTTGCTATTT
CCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCAATATTAGCATTTCAATCAGTGATC
TGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACCTGTGTTTTTAT
TAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATAAACACCACTGG
TCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAACTCAGCCTGGC
TTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTT
TCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTTCCCTCAGTAAC
ATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTTCGTAGGCCTGG
TTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAGCTTAATACAAC
AGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAAATAATGCTGTC
AAACAGGAACTGACCTTTATTTAATCTGAAATGATACATAGCTGTGTGTATATATTTTTAAAAA
TAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTGGGTTCCTTTCT
CCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGCCACACAGACTG
CAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCTCTCATGCAGGG
ACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTC
ACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCTTCCAGACACTG
TTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACATTCTGTTGCCCCTAGATTTGTGTTA
GTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGTTACTTTTAAATCATTAGGATAACC
CCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACCAAAATTATTGACATATATACTAAT
CAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCATGTTTAAGATGG
TAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAAAAACTTTGTACCTGTACAGCTCTA
ACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTTCCTAACTACTG
CAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTTCAATGTTTGCC
ATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGGGGGCATCTGGG
TCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGTCTCGGCACAGA
GCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCACACTTGGATGT
GGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGG
AGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAACTCTGTGCTCTA
GAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTATGATTTGAATT
TGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTT
TGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGG
TTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATATTTTGTACTTTTAAAAGCTCCAAC
CTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTTTTTAGCAGAAT
CTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGCTAACATTATTAAATTTGGGCCTCT
TGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCC
AGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCTTTGTTTCAGAT
TATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATATTCC
ATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAAATATCTGTAACCAAAATCATTTGA
AGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACT
AAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTG
GTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_008763668 ⟹ XP_008761890

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,975 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,239 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,647,252 (-)	NCBI

Sequence:

show sequence

CCAAGAGGAAGGAAGCGCCTTGACAGCGCCTCAGTCGGAACCCGAGTTCCGAGGGCAAGGACGA
TCGGGGACGGCGGCCCTGGCGAGCTGGCCGCCGGCAGGGCGAGCAGTCACAATAGGAGGCGGCG
GCCCGGCCCGGAGCGGTGGGAGCAGCCCCGCAGGGCGGAGCCTCCCCTCGCAGATATCTCCCGG
GGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGAGTGAAGATAGTCCAAGTCCTAAGAGA
CAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGC
GACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTC
AGGGGAACGATGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGA
AGAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTT
ATGCACAACAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCT
GTTACATCCAGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTC
CATCAAGGAACAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCT
GCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAG
TGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCAC
TTGCCAGTACCATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTC
CTCATCTTTCTCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAAC
ACAGCAGTCACGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTT
CAAGTAGGCAGTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTT
TGCAGTTCCTGACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATT
TATGCCTCGGAGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACC
TACCATCCCAGCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAA
CCTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCT
GGCAGAGAGACTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCT
TCTTACAGGTTCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTG
ATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGT
TGATAAATGGCTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCAC
CGGGATTCAGAGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATA
TATGGACTATCCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAAT
GGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTA
TGGGATTGTTATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTG
TGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGA
CGTGATCTTTTAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTT
ATATAGAGCCTTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGA
ATCTGTGAGCGAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGA
TCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCT
GGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACAC
TGATTGCTAAGGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGA
ATGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTA
AATGGGTCACTTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTT
TGTAAAAGAGACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATC
ATCATTAGCAATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCT
AGTAGCTTCTTACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAG
ATGTTTGAGTAATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCAC
TGGAGCAAAATCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCC
ATGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTC
CAGGCCTGAGGTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGG
ATCAGTGCTGTGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTT
AATTTATGTTAGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGA
AGATTGGATTTTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAA
ATGATACATAGCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTT
GAGGTCATCTTTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTG
TGAGTTGTCAGCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACAC
CTTGCTGCCGACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGG
TTCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCAC
ACAGAAGCACAATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATT
TAATCAACATTCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAA
ATGCACATGTTACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGT
GTTAAATACCAAAATTATTGACATATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTT
ATTTTTTAATTTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTAT
ATATCTTCAAAAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTG
TCGATGCACAGGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTG
CTCACGACTGGAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTG
TAAGAGGTAGTTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGAT
GACTGCCTGTCTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGA
CGGGTGAGGCTGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCT
AGCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAG
CCTCATCCTCTGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTT
AGCCCAGCTGTGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTT
TTTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTT
TTTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATG
AATCACGATATTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATA
TCAGGATGTCCTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAA
TGTAATTTGCTAACATTATTAAATTTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTG
CCTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGC
ATCTGCTTACCTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAA
TCATTTGCTGAGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTA
TGTATTATAAATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTA
CATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATC
CCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACA
TA

hide sequence

RefSeq Acc Id:

XM_017593138 ⟹ XP_017448627

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,813 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,037 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,646,904 (-)	NCBI

Sequence:

show sequence

TGATGATGTCACTTGGGAGAACTCAGAACCCGGTTGGAGGGGTCCCCTCTCGCGGCCTCCTACC
TCCGCGGGTTTCTGGACAGGCTCCGTTTTGTTCTCAGTGGATGGAAGTTCTTCCTTTCAGGGCT
GAAGAATGAGAGAGATATCTCCCGGGGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGGT
GATTTGTGAAAGGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTT
GATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGAGATGACATCAAATA
GGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGATGTAACACACCTGC
ACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACAT
AATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGG
AACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACC
CCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCC
TACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTT
GCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAG
TGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTC
CCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTC
CTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCA
GAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCC
CCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTT
TGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGGAGACTCACAGGACG
TAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATAT
GTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGG
AAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAA
ACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAAC
CACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTA
GAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCG
TACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAA
GAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTATCCACTGAACTTAAC
CTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGAC
TTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTTATACTAACTGTGTG
ATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTT
TGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTT
ATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGA
GTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAACT
ACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAG
AATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAG
TACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATTC
TAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTTT
GCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTCA
GATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCAA
CTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCAATATTAGCATTTCA
ATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACCT
GTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATAA
ACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAAC
TCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGGA
ACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTTC
CCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTTC
GTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAGC
TTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAAA
TAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAATGATACATAGCTGTGTGTATATA
TTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTGG
GTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGCC
ACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCTC
TCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCTC
TAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCTT
CCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACATTCTGTTGCCCCTAG
ATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGTTACTTTTAAATCAT
TAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACCAAAATTATTGACAT
ATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCATG
TTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAAAAACTTTGTACCTG
TACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTTC
CTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTTC
AATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGGG
GGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGTC
TCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCAC
ACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAGC
TGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAACT
CTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTAT
GATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTTT
TATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGGG
GGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATATTTTGTACTTTTAA
AAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTTT
TTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGCTAACATTATTAAAT
TTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTCC
CAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCTT
TGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCAA
ATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAAATATCTGTAACCAA
AATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTA
ATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAG
AGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_017593139 ⟹ XP_017448628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,134 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,467,419 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,713,108 (-)	NCBI

Sequence:

show sequence

GCGGGTCTCTTCGGAGCGGGGCGCAGGGTGTCGGTGCCTGCGGCAGAGCGCCCGGAGCAGGTAG
TGTTGGTGCTTCTTTTCAGTGCCAGTCCATCCATCACGACCACATTTGTCATGATGACAGTGAC
AAGATATCTCCCGGGGCAAATTCAGCACCTCTACCTGGCCATCCTAACAAGAGTGAAGATAGTC
CAAGTCCTAAGAGACAGCGCCTCTCTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCC
CTCACCACCAATGCGACCATGGGAGATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAAT
CAGCATCACTTCTCAGGGGAACGATGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTA
GGCGTCAGCGAGGAAGAAGGGAACGTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTA
TCACCATCTCCCTTATGCACAACAGCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAAT
GTATCTCCCCGTCTGTTACATCCAGCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACA
TACATGACCAGCTCCATCAAGGAACAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCA
TGGGATTCCTCTCTGCACAGGCCAGCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGC
TCTGTTGTTTTCAGTGGACAGCACCTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCAT
GTTCAGTTCAGCACTTGCCAGTACCATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTT
TCTTCTACATCCTCCTCATCTTTCTCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTT
GTCCCTTTCCAAACACAGCAGTCACGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCT
TAGGAGAACATCTTCAAGTAGGCAGTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACC
TCCGTCAGCTCCTTTGCAGTTCCTGACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTA
CCTTATCCACCATTTATGCCTCGGAGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAG
TGCCCCCTCCTACCTACCATCCCAGCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACC
TACAGTCGGCCCAACCTTCAGCTTTGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAA
GCCCTGTTAAACCTGGCAGAGAGACTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATA
TTGAACAGCTCCCTTCTTACAGGTTCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGT
AGTATGCATGTGTGATTTTGAGTCAAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTC
CATGCCAAGTGTGTTGATAAATGGCTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATG
CTTCTGAAGTGCACCGGGATTCAGAGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCC
TCATCACATGTATATATGGACTATCCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTA
CCAAAAGGGTCAATGGACCTTTCTTTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATT
AGTCTTCACAATTATGGGATTGTTATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTT
AGCTTAATTTTGTGTGTGCACTAACATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGC
AAGATTACAGTGGACGTGATCTTTTAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACA
TAGCAATCTACCTTATATAGAGCCTTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTG
CTGGTGATCAGTGAATCTGTGAGCGAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACT
GTGTGTGTGTGAGATCCTATATACCAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCT
GCAATGTATAATCTGGTGTGTTATTTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGT
TTGCTGTTGCACACTGATTGCTAAGGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCC
CTCCCTCCCAATGAATGGAATGAGAAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTT
CCTTGGTGATCCTAAATGGGTCACTTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTT
TTTTTCAGTTCTTTTGTAAAAGAGACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCA
ATATCATATTCATCATCATTAGCAATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTT
TCCTTTACATTTCTAGTAGCTTCTTACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCT
GGTCTGTTCTGAAGATGTTTGAGTAATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCC
TCCTTGACTTCCACTGGAGCAAAATCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCT
TCACTCAGGCCCCCATGGGCAGCGGTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATT
GAGTTCACACACTCCAGGCCTGAGGTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCT
TTGTTTCAGGACGGATCAGTGCTGTGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTT
ACTCTTTTTCTTTTAATTTATGTTAGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACT
TGCAGTGTAAATGAAGATTGGATTTTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCT
TTATTTAATCTGAAATGATACATAGCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACAT
AAATCAGATTGTTTGAGGTCATCTTTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGC
CTTCTCTGCCTCTGTGAGTTGTCAGCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCA
GCCGTGCGTGACACCTTGCTGCCGACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACT
TGTTACTGCCGTGGTTCTTACCTCCCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAG
GAAAGTTAATCCACACAGAAGCACAATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTT
AGACAAATAGGATTTAATCAACATTCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACT
TAAACAGTGGTAAAATGCACATGTTACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAA
TGAATAAAAGGTGTGTTAAATACCAAAATTATTGACATATATACTAATCAGCTCCAAATCACAT
ACAGTTTAATCTTTATTTTTTAATTTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTAT
ATATAGACTTTTATATATCTTCAAAAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCT
CAGTATTCATCCTGTCGATGCACAGGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTAC
CAAGGCACACTGTGCTCACGACTGGAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAA
TTTTTCTTGTTTTGTAAGAGGTAGTTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAAC
CCTACCATGCAGATGACTGCCTGTCTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCA
GACCTCTTCATGGACGGGTGAGGCTGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCT
CGGCGAGCATCTCTAGCTAGCAGATGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCAC
AGAGGATGCGGCAGCCTCATCCTCTGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAG
AACATTGTTGGCTTAGCCCAGCTGTGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTT
GGTTTTTGGTTTTTTTTGGTTTTTTTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTT
GTCGTTGTTGGTTTTTTGGCTTTGTGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTG
TTTTTGTTTTCATGAATCACGATATTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTC
AAGGCCTCCAAATATCAGGATGTCCTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTA
TACGCTCCCTGAAATGTAATTTGCTAACATTATTAAATTTGGGCCTCTTGTGATAATCACATAC
AATCTGCCTGCCTGCCTGCCTGCTTCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCT
GTCCCCCACCGTGCATCTGCTTACCTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGG
GGTGTTTGTTGGAATCATTTGCTGAGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACA
TAGTTTTAAATGTATGTATTATAAATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTT
TAACAAAGTTTGTACATTTTTTATGAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAAT
TTTTATTTTTAATCCCTGTGCCCAATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGAT
GTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_017593140 ⟹ XP_017448629

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,197,150 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,542 (-)	NCBI
Rnor_6.0	5	59,604,783 - 59,647,065 (-)	NCBI

Sequence:

show sequence

GCGGCGACGGCCGTTGGCTCCCGCGCGAGGGCGGTACTGGCCGCGGGAGGTTGGGAGCCGGCGG
GCAGCGCACGGCGGACGTTTCCCGGCAGCCTGGCGCTCTTTGTTCCCGCGGCAGCGGGGAGCCG
GCCCGCCCCTGCCTGGACGAGACGCAGAGTGAAGATAGTCCAAGTCCTAAGAGACAGCGCCTCT
CTCATTCAGTCTTTGATTATACATCAGCATCACCAGCTCCCTCACCACCAATGCGACCATGGGA
GATGACATCAAATAGGCAGCCCCCTTCAGTTCGACCAAATCAGCATCACTTCTCAGGGGAACGA
TGTAACACACCTGCACGCAACAGGAGAAGTCCTCCTGTTAGGCGTCAGCGAGGAAGAAGGGAAC
GTCTGTCTCGACATAATTCCATTAGTCAAGATGAAAACTATCACCATCTCCCTTATGCACAACA
GCAAGCAATAGAGGAACCTCGAGCCTTCCACCCTCCGAATGTATCTCCCCGTCTGTTACATCCA
GCTGCTCATCCACCCCAGCAGAATGCAGTCATGGTTGACATACATGACCAGCTCCATCAAGGAA
CAGTTCCTGTCTCCTACACTGTAACCACAGTGGCGCCCCATGGGATTCCTCTCTGCACAGGCCA
GCACATCCCTGCTTGCAGTACACAACAGGTCCCAGGATGCTCTGTTGTTTTCAGTGGACAGCAC
CTCCCTGTCTGTAGTGTGCCTCCTCCAATGCTTCAGGCATGTTCAGTTCAGCACTTGCCAGTAC
CATATGCTGCGTTCCCACCCCTCATTTCTAGTGATCCGTTTCTTCTACATCCTCCTCATCTTTC
TCCCCATCATCCTCCTCACTTGCCACCACCAGGCCAGTTTGTCCCTTTCCAAACACAGCAGTCA
CGATCGCCTCTGCAGAGGATAGAAAATGAAGTGGAGCTCTTAGGAGAACATCTTCAAGTAGGCA
GTTTCACTTATCCCCCTTCGGCCCACCCCCCAACATTACCTCCGTCAGCTCCTTTGCAGTTCCT
GACACATGACCCTTTGCATCAGGAGGTGTCCTTTGGAGTACCTTATCCACCATTTATGCCTCGG
AGACTCACAGGACGTAGCAGATACCGATCCCAGCAGCCAGTGCCCCCTCCTACCTACCATCCCA
GCTTACTGCCATATGTGTTATCAATGCTTCCAGTGCCACCTACAGTCGGCCCAACCTTCAGCTT
TGAATTGGATGTGGAAGATGGAGAAGTTGAAAATTACGAAGCCCTGTTAAACCTGGCAGAGAGA
CTGGGAGAGGCGAAACCTCGGGGACTGACTAAAGCGGATATTGAACAGCTCCCTTCTTACAGGT
TCAACCCTAGCAACCACCAGTCAGAGCAGACTTTGTGTGTAGTATGCATGTGTGATTTTGAGTC
AAGGCAGCTTCTTAGAGTCTTACCCTGTAACCACGAGTTCCATGCCAAGTGTGTTGATAAATGG
CTTAAGGGAAATCGTACTTGCCCAATTTGCCGAGCTGATGCTTCTGAAGTGCACCGGGATTCAG
AGTGACCAGCCTAAGAGCACAGATTTAGTTTGGGTGTTCCTCATCACATGTATATATGGACTAT
CCACTGAACTTAACCTGTGTGGCTTCCAGCCCTCCCTTTACCAAAAGGGTCAATGGACCTTTCT
TTGCACTGTGTGACTTAATCAACTATAAAAGCTTACAATTAGTCTTCACAATTATGGGATTGTT
ATACTAACTGTGTGATTGGAACTCCAAAGACCTTTTCTTTAGCTTAATTTTGTGTGTGCACTAA
CATTCCCTGGTTTTTGTGTGATCATTCCGAGTGTTGCTGCAAGATTACAGTGGACGTGATCTTT
TAGCATGTGCTTTTATAAAAAGTGGTAGCTCCAGATGACATAGCAATCTACCTTATATAGAGCC
TTCAGAAACTGTGAGTGGAACTGAGTGCAGCGGACGACTGCTGGTGATCAGTGAATCTGTGAGC
GAGTGTGTGCAACTACATGTGTGGGGGCATGGTAGCTACTGTGTGTGTGTGAGATCCTATATAC
CAGCATGTACCAAGAATGTGTGTGTAGTTTTAATTATGCTGCAATGTATAATCTGGTGTGTTAT
TTAAACAGCACTAGTACTGTACACTGGTTTTCCCTTGTGTTTGCTGTTGCACACTGATTGCTAA
GGGTGCATCGATTCTAAGCATTGAATACTCCATCCCCTCCCTCCCTCCCAATGAATGGAATGAG
AAAAGCCTTCCTTTGCTTCAGGCAGCTGTTCCCTTCTCTTCCTTGGTGATCCTAAATGGGTCAC
TTAAAAAAGTGTCAGATTCTCGCTCCATGACCTGATTTTTTTTTTCAGTTCTTTTGTAAAAGAG
ACTTAAATCTCCAACTTGCTATTTCCAAAAAGAAGGTGCAATATCATATTCATCATCATTAGCA
ATATTAGCATTTCAATCAGTGATCTGATGTTACTTGGTTTTCCTTTACATTTCTAGTAGCTTCT
TACAGAAAGGACCTGTGTTTTTATTAATGTGTAGATTTCTGGTCTGTTCTGAAGATGTTTGAGT
AATATATTTTATAAACACCACTGGTCCTGTAAGTCTCTCCTCCTTGACTTCCACTGGAGCAAAA
TCTGTTTTAACAACTCAGCCTGGCTTCTAGTTTGTGTTCTTCACTCAGGCCCCCATGGGCAGCG
GTGGTTTTAAGGGAACTGTTTGTTTCTGTTAGTGTTGATTGAGTTCACACACTCCAGGCCTGAG
GTGTCTACTTTTTCCCTCAGTAACATTCTCACTGAAACCTTTGTTTCAGGACGGATCAGTGCTG
TGACAGCTCATTTCGTAGGCCTGGTTTGCTTTGACGTCTTACTCTTTTTCTTTTAATTTATGTT
AGAATGAGAAAAGCTTAATACAACAGGTGCCCAGAATACTTGCAGTGTAAATGAAGATTGGATT
TTTGTTTAAAAAAATAATGCTGTCAAACAGGAACTGACCTTTATTTAATCTGAAATGATACATA
GCTGTGTGTATATATTTTTAAAAATAGGTTCATTGAACATAAATCAGATTGTTTGAGGTCATCT
TTCAGCAACATTGGGTTCCTTTCTCCTCAGTGTGCTCAGCCTTCTCTGCCTCTGTGAGTTGTCA
GCATCTGTGCGGCCACACAGACTGCAGCCTTCCACTCGCAGCCGTGCGTGACACCTTGCTGCCG
ACCTCACTCAGCTCTCATGCAGGGACTGTGTTCAACCACTTGTTACTGCCGTGGTTCTTACCTC
CCTTGAAGTTTCTCTAAGCTCGTCACAGCCTAGAGTTCAGGAAAGTTAATCCACACAGAAGCAC
AATTTTGTCCTCTTCCAGACACTGTTGCCTCTATCTAGTTAGACAAATAGGATTTAATCAACAT
TCTGTTGCCCCTAGATTTGTGTTAGTGTGTCAGAAATACTTAAACAGTGGTAAAATGCACATGT
TACTTTTAAATCATTAGGATAACCCCTGTCTGGTTCCTAATGAATAAAAGGTGTGTTAAATACC
AAAATTATTGACATATATACTAATCAGCTCCAAATCACATACAGTTTAATCTTTATTTTTTAAT
TTAAAGAAATCATGTTTAAGATGGTAAAAGCCCATCTTATATATAGACTTTTATATATCTTCAA
AAACTTTGTACCTGTACAGCTCTAACAACACTGCTCCTCTCAGTATTCATCCTGTCGATGCACA
GGCAAAGCACTTTCCTAACTACTGCAGACAGACTGACTACCAAGGCACACTGTGCTCACGACTG
GAAAGTGGCCTTTCAATGTTTGCCATAAAGTCCCAGTAAATTTTTCTTGTTTTGTAAGAGGTAG
TTGGCAATTTAGGGGGCATCTGGGTCTGTCCTGGTAAAACCCTACCATGCAGATGACTGCCTGT
CTCCTGGGAATGTCTCGGCACAGAGCTTTTGTGACGTGCAGACCTCTTCATGGACGGGTGAGGC
TGTCTTAGGTTCACACTTGGATGTGGTTCCCAGCTGGCCTCGGCGAGCATCTCTAGCTAGCAGA
TGAGGAAGTGCAGCTGTCCTGGGGAGATGCACCAGGCCACAGAGGATGCGGCAGCCTCATCCTC
TGTGCTCTAGAACTCTGTGCTCTAGAACTCTGTGCTCTAGAACATTGTTGGCTTAGCCCAGCTG
TGCAGTTTTTGTATGATTTGAATTTGAGTTTTGGTGTTTTGGTTTTTGGTTTTTTTTGGTTTTT
TTTAGTTTGGTTTTTATTTTGGTTTGGGGGTTTTGTTTTTGTCGTTGTTGGTTTTTTGGCTTTG
TGTGTGTGTGTGGGGGTGGGTGGGTTTTTGTTTTGTTTTGTTTTTGTTTTCATGAATCACGATA
TTTTGTACTTTTAAAAGCTCCAACCTCCACAAAACAACTCAAGGCCTCCAAATATCAGGATGTC
CTGAAAAAATTTTTTTAGCAGAATCTGAAATTTGATTTTATACGCTCCCTGAAATGTAATTTGC
TAACATTATTAAATTTGGGCCTCTTGTGATAATCACATACAATCTGCCTGCCTGCCTGCCTGCT
TCTGAGTGTTTTCCCAGCATCTCCAGGCCTCCTTAAGTCTGTCCCCCACCGTGCATCTGCTTAC
CTCATGCTGCTCTTTGTTTCAGATTATGAAAGCTCACAGGGGTGTTTGTTGGAATCATTTGCTG
AGTCATTTCCTCAAATCATATTCCATTGTGTCAGTTAACATAGTTTTAAATGTATGTATTATAA
ATATCTGTAACCAAAATCATTTGAAGGCTTGATAAATTTTTAACAAAGTTTGTACATTTTTTAT
GAAAGTTACTAGTAATGCTTTACTAAGTAGTGCAATGAATTTTTATTTTTAATCCCTGTGCCCA
ATTTTGGAGTTGAGAGGGTTGTTGGTAATAAATGTATGATGTACACTTAAAACATA

hide sequence

RefSeq Acc Id:

XM_039109234 ⟹ XP_038965162

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,134 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,467,419 (-)	NCBI

RefSeq Acc Id:

XM_039109235 ⟹ XP_038965163

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,138 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,467,424 (-)	NCBI

RefSeq Acc Id:

XM_039109236 ⟹ XP_038965164

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,184,117 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,389,145 (-)	NCBI

RefSeq Acc Id:

XM_039109237 ⟹ XP_038965165

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,975 (-)	NCBI
mRatBN7.2	5	58,358,771 - 58,401,239 (-)	NCBI

RefSeq Acc Id:

XM_063287129 ⟹ XP_063143199

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,197,152 (-)	NCBI

RefSeq Acc Id:

XM_063287130 ⟹ XP_063143200

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,197,151 (-)	NCBI

RefSeq Acc Id:

XM_063287131 ⟹ XP_063143201

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,621 (-)	NCBI

RefSeq Acc Id:

XM_063287132 ⟹ XP_063143202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,785 (-)	NCBI

RefSeq Acc Id:

XM_063287133 ⟹ XP_063143203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,810 (-)	NCBI

RefSeq Acc Id:

XM_063287135 ⟹ XP_063143205

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,196,762 (-)	NCBI

RefSeq Acc Id:

XM_063287136 ⟹ XP_063143206

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,263,008 (-)	NCBI

RefSeq Acc Id:

XM_063287137 ⟹ XP_063143207

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	63,154,507 - 63,198,225 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_604462	(Get FASTA)	NCBI Sequence Viewer
	XP_006238074	(Get FASTA)	NCBI Sequence Viewer
	XP_006238076	(Get FASTA)	NCBI Sequence Viewer
	XP_006238077	(Get FASTA)	NCBI Sequence Viewer
	XP_006238078	(Get FASTA)	NCBI Sequence Viewer
	XP_006238079	(Get FASTA)	NCBI Sequence Viewer
	XP_006238080	(Get FASTA)	NCBI Sequence Viewer
	XP_006238082	(Get FASTA)	NCBI Sequence Viewer
	XP_008761890	(Get FASTA)	NCBI Sequence Viewer
	XP_017448627	(Get FASTA)	NCBI Sequence Viewer
	XP_017448628	(Get FASTA)	NCBI Sequence Viewer
	XP_017448629	(Get FASTA)	NCBI Sequence Viewer
	XP_038965162	(Get FASTA)	NCBI Sequence Viewer
	XP_038965163	(Get FASTA)	NCBI Sequence Viewer
	XP_038965164	(Get FASTA)	NCBI Sequence Viewer
	XP_038965165	(Get FASTA)	NCBI Sequence Viewer
	XP_063143199	(Get FASTA)	NCBI Sequence Viewer
	XP_063143200	(Get FASTA)	NCBI Sequence Viewer
	XP_063143201	(Get FASTA)	NCBI Sequence Viewer
	XP_063143202	(Get FASTA)	NCBI Sequence Viewer
	XP_063143203	(Get FASTA)	NCBI Sequence Viewer
	XP_063143205	(Get FASTA)	NCBI Sequence Viewer
	XP_063143206	(Get FASTA)	NCBI Sequence Viewer
	XP_063143207	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH83548	(Get FASTA)	NCBI Sequence Viewer
	AAL88459	(Get FASTA)	NCBI Sequence Viewer
	EDL98789	(Get FASTA)	NCBI Sequence Viewer
	EDL98790	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000056951
	ENSRNOP00000056951.2
	ENSRNOP00000072089
	ENSRNOP00000072089.2
	ENSRNOP00000074615
	ENSRNOP00000074615.2
	ENSRNOP00000080724
	ENSRNOP00000080724.2

RefSeq Acc Id:

NP_604462 ⟸ NM_134467

- UniProtKB:

A0A0G2K8H9 (UniProtKB/TrEMBL), A0A8I5XVZ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL
PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP
LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH
PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA
PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG
PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPFYRFNPSNHQSEQTLCVVCM
CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE

hide sequence

RefSeq Acc Id:	XP_006238082 ⟸ XM_006238020
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K236 (UniProtKB/TrEMBL), A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238079 ⟸ XM_006238017
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238078 ⟸ XM_006238016
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238080 ⟸ XM_006238018
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238077 ⟸ XM_006238015
- Peptide Label:	isoform X11
- UniProtKB:	Q8R4E3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRESEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPNQHHFSGERCNTPAR NRRSPPVRRQRGRRERLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQ QNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSV PPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQR IENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRS RYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVGPTFSFELDVEDGEVENYEALLNLAERLGEAKP RGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRT CPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238076 ⟸ XM_006238014
- Peptide Label:	isoform X10
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MREISPGANSAPLPGHPNKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVR PNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHLPYAQQQAIEEPRAFHP PNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVP GCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPG QFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSF GVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVGPTFSFELDVEDGEVEN YEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNH EFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_006238074 ⟸ XM_006238012
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5ZQX4 (UniProtKB/TrEMBL), A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MREISPGANSAPLPGHPNKVICERVRLPSLFPLLPSDQDTTIQEDAHFKAFFQSEDSPSPKRQR LSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRR ERLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQ GTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLP VPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQV GSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYH PSLLPYVLSMLPVPPTVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSY RFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRD SE hide sequence

RefSeq Acc Id:	XP_008761890 ⟸ XM_008763668
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_017448628 ⟸ XM_017593139
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_017448629 ⟸ XM_017593140
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I5ZJ72 (UniProtKB/TrEMBL), A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHL PYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIP LCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH PPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSA PLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVG PTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCM CDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

RefSeq Acc Id:	XP_017448627 ⟸ XM_017593138
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MREISPGANSAPLPGHPNKVICERSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQ PPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENYHHLPYAQQQAIEEP RAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACS TQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPH LPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLH QEVSFGVPYPPFMPRRLTGRSRYRSQQPVPPPTYHPSLLPYVLSMLPVPPTVGPTFSFELDVED GEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRV LPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE hide sequence

Ensembl Acc Id:

ENSRNOP00000074615 ⟸ ENSRNOT00000077367

Ensembl Acc Id:

ENSRNOP00000056951 ⟸ ENSRNOT00000060203

Ensembl Acc Id:

ENSRNOP00000072089 ⟸ ENSRNOT00000091944

RefSeq Acc Id:	XP_038965163 ⟸ XM_039109235
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965162 ⟸ XM_039109234
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965165 ⟸ XM_039109237
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965164 ⟸ XM_039109236
- Peptide Label:	isoform X13
- UniProtKB:	Q5XIX1 (UniProtKB/TrEMBL), F7F0Z9 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000077297 ⟸ ENSRNOT00000108875

Ensembl Acc Id:

ENSRNOP00000076514 ⟸ ENSRNOT00000097803

Ensembl Acc Id:

ENSRNOP00000080724 ⟸ ENSRNOT00000109519

RefSeq Acc Id:	XP_063143206 ⟸ XM_063287136
- Peptide Label:	isoform X13
- UniProtKB:	F7F0Z9 (UniProtKB/TrEMBL), Q5XIX1 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143207 ⟸ XM_063287137
- Peptide Label:	isoform X13
- UniProtKB:	F7F0Z9 (UniProtKB/TrEMBL), Q5XIX1 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143199 ⟸ XM_063287129
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143200 ⟸ XM_063287130
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143203 ⟸ XM_063287133
- Peptide Label:	isoform X14
- UniProtKB:	Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143202 ⟸ XM_063287132
- Peptide Label:	isoform X13
- UniProtKB:	F7F0Z9 (UniProtKB/TrEMBL), Q5XIX1 (UniProtKB/TrEMBL), Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143205 ⟸ XM_063287135
- Peptide Label:	isoform X15
- UniProtKB:	Q8R4E3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143201 ⟸ XM_063287131
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I5XVZ9 (UniProtKB/TrEMBL)

Protein Domains

RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5XIX1-F1-model_v2	AlphaFold	Q5XIX1	1-432	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693695

Promoter ID:

EPDNEW_R4215

Type:

single initiation site

Name:

Rnf38_1

Description:

ring finger protein 38

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	59,647,704 - 59,647,764	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621856	AgrOrtholog
BioCyc Gene	G2FUF-41474	BioCyc
Ensembl Genes	ENSRNOG00000013956	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000060203	ENTREZGENE
	ENSRNOT00000060203.4	UniProtKB/TrEMBL
	ENSRNOT00000077367	ENTREZGENE
	ENSRNOT00000077367.3	UniProtKB/TrEMBL
	ENSRNOT00000091944	ENTREZGENE
	ENSRNOT00000091944.3	UniProtKB/TrEMBL
	ENSRNOT00000109519	ENTREZGENE
	ENSRNOT00000109519.2	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7134112	IMAGE-MGC_LOAD
InterPro	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
KEGG Report	rno:171501	UniProtKB/TrEMBL
MGC_CLONE	MGC:93195	IMAGE-MGC_LOAD
NCBI Gene	171501	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE RNF38	UniProtKB/TrEMBL
	GH10160P	UniProtKB/TrEMBL
Pfam	zf-RING_2	UniProtKB/TrEMBL
PhenoGen	Rnf38	PhenoGen
PROSITE	ZF_RING_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000013956	RatGTEx
SMART	RING	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
UniProt	A0A0G2K236	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2K8H9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5XVZ9	ENTREZGENE
	A0A8I5ZJ72	ENTREZGENE
	A0A8I5ZQX4	ENTREZGENE, UniProtKB/TrEMBL
	F7F0Z9	ENTREZGENE, UniProtKB/TrEMBL
	Q5XIX1	ENTREZGENE, UniProtKB/TrEMBL
	Q8R4E3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2005-01-20	Rnf38	ring finger protein 38	Oip1	RING finger protein OIP1	Symbol and Name updated	1299863	APPROVED
2002-08-07	Oip1	RING finger protein OIP1			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains a RING finger domain	633521
gene_expression	expressed in round spermatids, spermatocytes, and several somatic tissues	633521

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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