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Gene: Cul5 (cullin 5) Rattus norvegicus

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Symbol:

Cul5

Name:

cullin 5

RGD ID:

621742

Description:

Predicted to enable ubiquitin ligase complex scaffold activity and ubiquitin protein ligase binding activity. Involved in regulation of cytosolic calcium ion concentration. Predicted to be located in site of DNA damage. Predicted to be part of Cul5-RING ubiquitin ligase complex and SCF ubiquitin ligase complex. Predicted to be active in nucleus. Orthologous to human CUL5 (cullin 5); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ubiquitin/proteasome degradation pathway; INTERACTS WITH 2,4-dinitrotoluene; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

CUL-5; cullin-5; VACM-1; vasopressin-activated calcium-mobilizing receptor 1; vasopressin-activated calcium-mobilizing receptor protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CUL5 (cullin 5)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Cul5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cul5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CUL5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CUL5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Cul5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CUL5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CUL5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cul5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Cul5 (cullin 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	FADS1 (fatty acid desaturase 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	CUL5 (cullin 5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Cul5 (cullin 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cul5b (cullin 5b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	cul5b (cullin 5b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cul5a (cullin 5a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	cul5a (cullin 5a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	cul-5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cul5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	cul5	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Cul5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	62,909,150 - 62,974,641 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	62,912,193 - 62,965,463 (-)	Ensembl				GRCr8
mRatBN7.2	8	54,012,963 - 54,066,751 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	54,016,006 - 54,066,666 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	59,541,355 - 59,591,763 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	57,820,377 - 57,870,785 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	55,684,618 - 55,735,030 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	58,199,992 - 58,255,149 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	58,202,821 - 58,253,688 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	56,782,444 - 56,837,338 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	57,080,787 - 57,132,486 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	53,506,656 - 53,557,091 (-)	NCBI		Celera
RGSC_v3.1	8	57,099,840 - 57,151,540 (-)	NCBI
Cytogenetic Map	8	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brain Injuries (IEP)

Breast Neoplasms (ISO)

Hemorrhagic Shock (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-sulfonyldiphenol (ISO)

5-fluorouracil (ISO)

acetamide (EXP)

acrylamide (EXP)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

bathocuproine disulfonic acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

beta-naphthoflavone (EXP)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

DDE (ISO)

desmopressin (EXP)

diarsenic trioxide (ISO)

dicrotophos (ISO)

dieldrin (EXP)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

geldanamycin (ISO)

hypochlorous acid (ISO)

inulin (ISO)

ionomycin (ISO)

ivermectin (ISO)

maneb (ISO)

methidathion (ISO)

N-nitrosodiethylamine (EXP)

paracetamol (EXP,ISO)

paraquat (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

phorbol 13-acetate 12-myristate (ISO)

potassium chromate (ISO)

pyrrolidine dithiocarbamate (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sodium arsenate (ISO)

tamoxifen (ISO)

temozolomide (ISO)

testosterone enanthate (ISO)

thioacetamide (EXP)

trichostatin A (ISO)

triphenyl phosphate (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell migration (IEA,ISO)

cerebral cortex radially oriented cell migration (ISO)

G protein-coupled receptor signaling pathway (IEA)

negative regulation of focal adhesion assembly (IEA,ISO,ISS)

negative regulation of focal adhesion disassembly (IEA,ISO,ISS)

proteasome-mediated ubiquitin-dependent protein catabolic process (IEA,ISO)

protein K11-linked ubiquitination (IEA,ISO)

protein polyubiquitination (TAS)

protein ubiquitination (IBA,IEA,ISO)

radial glia guided migration of Purkinje cell (ISO)

reelin-mediated signaling pathway (ISO,ISS)

regulation of cytosolic calcium ion concentration (IMP)

regulation of neuron migration (ISO,ISS)

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (IBA)

signal transduction (IEA)

ubiquitin-dependent protein catabolic process (IEA)

Cellular Component

Cul5-RING ubiquitin ligase complex (IBA,IEA,ISO,ISS,TAS)

cullin-RING ubiquitin ligase complex (IEA)

nucleus (IBA,IEA,ISO)

SCF ubiquitin ligase complex (IBA)

site of DNA damage (IEA,ISO,ISS)

Molecular Function

protein binding (ISO)

ubiquitin ligase complex scaffold activity (IBA,IEA,ISO,ISS)

ubiquitin protein ligase binding (IBA,IEA,ISO)

ubiquitin-protein transferase activity (TAS)

vasopressin receptor activity (TAS)

Molecular Pathway Annotations Click to see Annotation Detail View

neddylation pathway (ISS)

proteasome degradation pathway involving cullin-dependent ubiquitin ligases (TAS)

ubiquitin/proteasome degradation pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Expression of VACM-1/cul5 mutant in endothelial cells induces MAPK phosphorylation and maspin degradation and converts cells to the angiogenic phenotype.	Buchwalter A, etal., Microvasc Res. 2008 Mar;75(2):155-68. Epub 2007 Sep 4.
2.	Expression of VACM-1 protein in cultured rat adrenal endothelial cells is linked to the cell cycle.	Burnatowska-Hledin, etal., Endothelium. 2001;8(1):49-63.
3.	Vasopressin-activated calcium-mobilizing (VACM-1) receptor mRNA is present in peripheral organs and the central nervous system of the laboratory rat.	Ceremuga TE, etal., Endocr Res 2001 Nov;27(4):433-45.
4.	Alterations of cullin-5 mRNA levels in the rat central nervous system following hemorrhagic shock.	Ceremuga TE, etal., Neurol Res. 2003 Mar;25(2):211-6.
5.	Cullin-5 is ubiquitous in the rat brain.	Ceremuga TE, etal., Neurosci Lett 2003 Jul 17;345(2):121-5.
6.	Osmotic stress increases cullin-5 (cul-5) mRNA in the rat cerebral cortex, hypothalamus and kidney.	Ceremuga TE, etal., Neurosci Res 2003 Mar;45(3):305-11.
7.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
8.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
9.	Expression of the genes encoding the vasopressin-activated calcium-mobilizing receptor and the dual angiotensin II/vasopressin receptor in the rat central nervous system.	Hurbin A, etal., J Neuroendocrinol 2000 Jul;12(7):677-84.
10.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
11.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
12.	Nedd8 on cullin: building an expressway to protein destruction.	Pan ZQ, etal., Oncogene. 2004 Mar 15;23(11):1985-97.
13.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
14.	GOA pipeline	RGD automated data pipeline
15.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
17.	Cullin 5 gene expression in the rat cerebral cortex and hippocampus following traumatic brain injury (TBI).	Yao XL, etal., Neurosci Lett. 2006 Nov 27;409(1):65-9. Epub 2006 Sep 28.

Additional References at PubMed

PMID:17636018	PMID:19917606	PMID:22405651	PMID:22581383	PMID:22709582	PMID:22871113	PMID:23171819	PMID:24210661	PMID:28292928

Genomics

Comparative Map Data

Cul5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	62,909,150 - 62,974,641 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	62,912,193 - 62,965,463 (-)	Ensembl				GRCr8
mRatBN7.2	8	54,012,963 - 54,066,751 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	54,016,006 - 54,066,666 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	59,541,355 - 59,591,763 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	57,820,377 - 57,870,785 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	55,684,618 - 55,735,030 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	58,199,992 - 58,255,149 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	58,202,821 - 58,253,688 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	56,782,444 - 56,837,338 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	57,080,787 - 57,132,486 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	53,506,656 - 53,557,091 (-)	NCBI		Celera
RGSC_v3.1	8	57,099,840 - 57,151,540 (-)	NCBI
Cytogenetic Map	8	q24	NCBI

CUL5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	108,008,898 - 108,107,761 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	108,008,898 - 108,107,781 (+)	Ensembl			hg38	GRCh38
GRCh37	11	107,879,624 - 107,978,488 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	107,384,618 - 107,483,698 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	107,384,854 - 107,482,773	NCBI
Celera	11	105,033,798 - 105,132,859 (+)	NCBI		Celera
Cytogenetic Map	11	q22.3	NCBI
HuRef	11	103,804,481 - 103,903,597 (+)	NCBI		HuRef
CHM1_1	11	107,762,661 - 107,861,678 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	108,015,935 - 108,114,778 (+)	NCBI		T2T-CHM13v2.0

Cul5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	53,525,881 - 53,578,807 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	53,525,882 - 53,581,314 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	53,614,581 - 53,667,507 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	53,614,582 - 53,670,014 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	53,422,687 - 53,475,612 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	53,379,265 - 53,429,872 (-)	NCBI		MGSCv36	mm8
Celera	9	50,874,391 - 50,927,173 (-)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	29.12	NCBI

Cul5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	10,256,381 - 10,336,156 (+)	Ensembl
ChiLan1.0	NW_004955412	10,266,072 - 10,336,156 (+)	NCBI	ChiLan1.0	ChiLan1.0

CUL5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	108,752,165 - 108,852,631 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	109,846,019 - 109,945,548 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	102,895,611 - 102,994,447 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	106,371,759 - 106,469,989 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	106,371,759 - 106,469,989 (+)	Ensembl			panPan2	panpan1.1

CUL5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	24,393,692 - 24,477,595 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	24,396,823 - 24,488,043 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	24,319,399 - 24,414,613 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	24,422,828 - 24,518,010 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	24,422,832 - 24,518,012 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	24,470,110 - 24,565,387 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	24,371,684 - 24,467,023 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	24,429,854 - 24,525,492 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Cul5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	90,811,798 - 90,894,693 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936551	641,463 - 724,711 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936551	641,469 - 724,706 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CUL5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	36,419,881 - 36,507,667 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	36,419,806 - 36,507,681 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	40,496,564 - 40,584,016 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUL5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	99,432,034 - 99,538,296 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	99,432,706 - 99,534,888 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	26,419,221 - 26,524,597 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cul5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	2,736,490 - 2,820,564 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624784	2,736,462 - 2,822,854 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Cul5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	47,605,252 - 47,655,978 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Cul5
269 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	159
Count of miRNA genes:	130
Interacting mature miRNAs:	139
Transcripts:	ENSRNOT00000010956
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
4889938	Bss89	Bone structure and strength QTL 89	3.8		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	8	58991697	91341052	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
737824	Hcar10	Hepatocarcinoma resistance QTL 10	2.9		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	8	49610204	68373388	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
10402857	Bp380	Blood pressure QTL 380		0.95	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
631216	Stl9	Serum triglyceride level QTL 9	4.71	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	8	50763951	67219641	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
5684973	Bss100	Bone structure and strength QTL 100	4.7		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	8	58991697	91341052	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
12879878	Bw183	Body weight QTL 183		0.001	body mass (VT:0001259)	body weight (CMO:0000012)	8	62848139	107848139	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
12879879	Cm99	Cardiac mass QTL 99		0.001	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	62848139	107848139	Rat
1331804	Cm30	Cardiac mass QTL 30	3.77443		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	8	62970527	107970527	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
12879880	Cm100	Cardiac mass QTL 100		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	8	62848139	107848139	Rat
12879881	Cm101	Cardiac mass QTL 101		0.001	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	8	62848139	107848139	Rat
12879882	Am8	Aortic mass QTL 8		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	8	62848139	107848139	Rat
12879883	Kidm65	Kidney mass QTL 65		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	62848139	107848139	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
2313086	Bss60	Bone structure and strength QTL 60	4.1	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	8	58991697	91341052	Rat
2293697	Bmd39	Bone mineral density QTL 39			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	8	62848139	107848139	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
1331838	Niddm61	Non-insulin dependent diabetes mellitus QTL 61	3.53	0.0004	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	62963099	107963099	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2301402	Bp316	Blood pressure QTL 316		0.005	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	62848139	107848139	Rat

Markers in Region

D8Rat111

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	54,043,744 - 54,043,840 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	58,230,766 - 58,230,861	NCBI	Rnor6.0
Rnor_5.0	8	56,813,094 - 56,813,189	UniSTS	Rnor5.0
RGSC_v3.4	8	57,109,012 - 57,109,108	RGD	RGSC3.4
RGSC_v3.4	8	57,109,013 - 57,109,108	UniSTS	RGSC3.4
Celera	8	53,534,460 - 53,534,573	UniSTS
RGSC_v3.1	8	57,128,066 - 57,128,162	RGD
SHRSP x BN Map	8	39.17	UniSTS
SHRSP x BN Map	8	39.17	RGD
FHH x ACI Map	8	47.98	RGD
Cytogenetic Map	8	q24	UniSTS

RH130898

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	54,067,033 - 54,067,230 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	58,254,052 - 58,254,248	NCBI	Rnor6.0
Rnor_5.0	8	56,836,218 - 56,836,414	UniSTS	Rnor5.0
RGSC_v3.4	8	57,133,137 - 57,133,333	UniSTS	RGSC3.4
Celera	8	53,557,742 - 53,557,938	UniSTS
RH 3.4 Map	8	594.8	UniSTS
Cytogenetic Map	8	q24	UniSTS

BF397556

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	8	62,911,851 - 62,912,031 (+)	Marker Load Pipeline
mRatBN7.2	8	54,015,664 - 54,015,844 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	58,202,694 - 58,202,873	NCBI	Rnor6.0
Rnor_5.0	8	56,785,146 - 56,785,325	UniSTS	Rnor5.0
RGSC_v3.4	8	57,080,446 - 57,080,625	UniSTS	RGSC3.4
Celera	8	53,506,315 - 53,506,494	UniSTS
RH 3.4 Map	8	594.8	UniSTS
Cytogenetic Map	8	q24	UniSTS

RH141279

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	54,047,157 - 54,047,360 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	58,234,179 - 58,234,381	NCBI	Rnor6.0
Rnor_5.0	8	56,816,507 - 56,816,709	UniSTS	Rnor5.0
RGSC_v3.4	8	57,112,426 - 57,112,628	UniSTS	RGSC3.4
Celera	8	53,537,891 - 53,538,093	UniSTS
RH 3.4 Map	8	593.6	UniSTS
Cytogenetic Map	8	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_022683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF135115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ227844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000010956 ⟹ ENSRNOP00000010956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	62,912,193 - 62,962,854 (-)	Ensembl
mRatBN7.2 Ensembl	8	54,016,006 - 54,066,666 (-)	Ensembl
Rnor_6.0 Ensembl	8	58,202,821 - 58,253,688 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099521 ⟹ ENSRNOP00000089198

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	62,912,193 - 62,952,707 (-)	Ensembl
mRatBN7.2 Ensembl	8	54,016,006 - 54,056,518 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114900 ⟹ ENSRNOP00000097338

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	62,912,193 - 62,962,854 (-)	Ensembl
mRatBN7.2 Ensembl	8	54,016,006 - 54,066,666 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000125969 ⟹ ENSRNOP00000107439

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	62,912,193 - 62,965,463 (-)	Ensembl

RefSeq Acc Id:

NM_022683 ⟹ NP_073174

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	62,912,193 - 62,962,571 (-)	NCBI
mRatBN7.2	8	54,016,006 - 54,066,383 (-)	NCBI
Rnor_6.0	8	58,203,035 - 58,253,401 (-)	NCBI
Rnor_5.0	8	56,782,444 - 56,837,338 (-)	NCBI
RGSC_v3.4	8	57,080,787 - 57,132,486 (-)	RGD
Celera	8	53,506,656 - 53,557,091 (-)	RGD

Sequence:

show sequence

CGCTGACGGCACGCCGCTCCGGCGTCCCCTGCATCCCTCGCTGCGGCCTGCGGGGTCCTGCTGG
GAACCCCGGCCTCTCGAGGAGGCCTGGCCCCGAGAGCCGCCAAGTCTCGCCGCGTCTCGCGAGA
GTCCAAGTTGAGAACATGGCGACGTCTAATCTGTTAAAGAATAAAGGTTCTCTCCAGTTTGAAG
ACAAGTGGGATTTCATGCGTCCAATTGTTTTGAAGCTTTTACGCCAGGAATCTGTAACAAAGCA
GCAGTGGTTTGATCTGTTTTCGGATGTACATGCTGTCTGTCTCTGGGATGATAAAGGCTCATCA
AAAATTCATCAGGCTTTAAAAGAAGATATCCTTGAATTTATTAAGCAAGCACAGGCACGCGTAC
TGAGCCATCAAGATGACACAGCTTTGCTAAAGGCATATATTGTTGAATGGCGAAAATTCTTCAC
CCAGTGCGATATTTTACCAAAACCTTTTTGTCAACTAGAGGTGACTTTATTGGGTAAACAAAGC
AGCAATAAAAAATCAAATATGGAAGACAGTATTGTTCGAAAGCTCATGCTTGATACGTGGAATG
AGTCGATTTTTTCGAATATAAAGAACAGACTCCAGGATAGTGCAATGAAGCTGGTGCATGCTGA
GAGATTAGGGGAAGCTTTTGATTCCCAGCTGGTCATAGGAGTGCGAGAGTCCTATGTTAATCTT
TGTTCTAATCCTGAGGACAAGCTTCAGATCTATAGGGATAATTTTGAGAAGGCATATTTGGACT
CAACAGAGAGATTTTATAGAACTCAGGCACCCTCATATTTACAGCAAAATGGTGTACAGAATTA
CATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAAAGAGCACTCCGATACTTAGAAACA
AGACGAGAATGTAACTCTGTTGAAGCACTCATGGAATGCTGTGTGAACGCACTGGTGACCTCAT
TTAAAGAGACTATTTTAGCAGAATGTCAAGGCATGATCAAGCGAAATGAAACTGAAAAGTTACA
TTTGATGTTTTCACTGATGGACAAAGTTCCTGGTGGGATCGAGCCCATGTTGAAGGATCTGGAG
GAGCACATCATAAGTGCTGGTCTAGCAGACATGGTGGCAGCTGCTGAAACCATCACCACTGACT
CTGAGAAGTATGTGGAACAATTACTTACACTGTTCAATAGATTCAGTAAACTGGTCAAAGAAGC
TTTTCAGGATGATCCTCGTTTCCTTACTGCAAGAGATAAGGCGTATAAAGCAGTTGTTAATGAT
GCTACCATATTTAAACTTGAATTGCCTTTGAAGCAAAAAGGAGTGGGGTTGAAAACTCAGCCTG
AGTCAAAGTGCCCTGAGTTGCTTGCTAATTACTGTGACATGTTATTAAGGAAAACACCATTAAG
CAAAAAACTAACCTCTGAAGAGATTGAAGCAAAGCTTAAAGAAGTGCTCTTGGTACTTAAATAT
GTACAAAACAAAGATGTTTTTATGAGGTATCACAAAGCTCATCTTACCCGACGTCTCATATTGG
ACATCTCTGCTGATAGCGAGATTGAAGAAAACATGGTGGAGTGGCTAAGAGAAGTTGGTATGCC
AGCAGATTATGTGAACAAACTTGCTAGAATGTTTCAGGACATAAAAGTATCTGAAGACTTGAAC
CAAGCTTTTAAAGAAATGCATAAAAATAATAAGTTGGCATTACCAGCTGATTCAGTTAATATAA
AGATTTTGAATGCTGGTGCTTGGTCTAGAAGCTCTGAGAAAGTCTTTGTCTCACTTCCTACTGA
ACTGGAGGATTTGATACCTGAAGTAGAAGAATTTTACAAAAAAAATCATAGTGGTAGAAAATTA
CATTGGCACCATCTCATGTCAAATGGAATTATAACATTTAAAAACGAAGTAGGTCAGTACGATT
TGGAAGTAACCACGTTTCAGTTGGCTGTGTTGTTTGCATGGAACCAAAGACCTAGAGAGAAAAT
CAGCTTTGAGAATCTAAAACTTGCAACGGAACTCCCTGATGCTGAACTTAGAAGGACTTTATGG
TCTTTAGTAGCTTTTCCCAAGCTCAAACGGCAAGTTTTATTGTACGACCCTCAAGTCAATTCAC
CCAAAGATTTTACAGAAGGCACCCTCTTCTCAGTCAACCAGGACTTTAGTTTAATAAAAAATGC
AAAAGTACAGAAAAGGGGAAAAATCAATTTGATTGGACGCTTGCAGCTCACTACAGAACGGATG
AGAGAAGAAGAAAATGAAGGAATAGTTCAACTAAGAATATTAAGAACCCAGGAAGCCATCATAC
AAATAATGAAAATGAGGAAGAAAATTAGCAATGCTCAGCTGCAGACTGAATTAGTAGAAATTTT
GAAAAACATGTTCTTACCACAGAAGAAAATGATAAAAGAGCAAATCGAATGGCTGATCGAGCAC
AAGTACATCAGGAGGGATGAGGCCGACATCAACACCTTCATATACATGGCGTAGCTGAATCCAG
CCTGCCGCAGCTACACATCTGGAGACCTGGGCAGAAGGTTGTCCCAGGCTGAGCTGGAGGAAGG
TTTATTTGGACTTTGATTACATAAATATTAAACTCTGCCTTACCTTACAAAGCGACTATATTTT
GCCAGTCACATTAGTCAGCATGATGGCAATCCCTTCATGTTGCACACTCTTTAACAGCATGCTG
TTTTGTGGAGAAAATT

hide sequence

RefSeq Acc Id:

XM_006243090 ⟹ XP_006243152

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	62,909,150 - 62,974,641 (-)	NCBI
mRatBN7.2	8	54,012,963 - 54,066,751 (-)	NCBI
Rnor_6.0	8	58,199,992 - 58,255,149 (-)	NCBI
Rnor_5.0	8	56,782,444 - 56,837,338 (-)	NCBI

Sequence:

show sequence

CAATGCTTTTAACCATTGAGCAATCTCTCCAGACTGTCATATTTAGTCTTTAACTTTTTAGAAT
TTTATGTGGATGAATTTTTGCCAGCATGTAGATTTGCACACCAAGTGTATGCCTGATGCCTATA
CACAGAGCCCCCTAAGTGCCAGAGTACCAGTGCTCTAAAACTGGGCCATTTCGCCAGTCTTTAT
ATTTAATTTTTGCAAAAGCGCTGTGATTTAGATGTTTTAATACTAATTTCACCAACAAGAGAAC
TAAGGCTCATTGTGGTCAAGTAAAGCATTCAAGGTCTGAGAAGTAGATCTTAACTCATTTTAAG
CATTGTGTGGCGCTAATTGGTCTGGAAGTCAGAGTGCTGAAATTAAAGGTATGTTCCACCACAC
CCTGCCCGAAGCAGAGATAAGGAAATTTTGGCCATTTCGGAGGGGAGCACATACCTATAATTCT
ACCAGTCATTCTGGAGGCAGAGAAAGGCAGATCTCTGTGAGTTCTAGGTCAACCTGGTCTACAT
AGAGAATTCTTGGCCTTCCAAGAATAACATAGAAAGACCGCTTCAAACAAAGCTACCTGGAATG
CTTGGGGCAAAAGGAGATTTCAGGCTTAATATATGAAATAAAATCCTTCAGAGTAGAGCCTGAA
AGTCTGCTTTTCTAATTAGCACCTCAGATTAAGATGAACAATGTATTAGCAATGTTTGAGAAGC
TTTTGGTTTTTTTGTAGCCCTGGCTGTCCTGGAGCTTGCTCTGTAGATCAGGTTGCCCTCAATC
TTACAGAGATCCTCCTGCCTCTGCTTTGAGTACTGGGATTAAAATTGTGGAACAGTGAGAGATG
AGTTTCAAAGAAACAAGTTTGACACCAGGTGGTGGTTTCCCACACCTTTAATTCCAGCACTTGG
GAGCCGAGGCACCTCCAGTATAGCCAGGGCTATATAGAGAAATTCTGTCAAAAACCAACCAACC
AAAGAAACAAACAAACAAAACCCAAAAAGAACAGTGCTAGGAACTTGCGTAATGCATTAAATTA
CAGCTAAACGGAGATAACCCTGTATAAATTATATTGTCTTCCCTTGATCAGAGATTTGTGATCT
GAAGCGATGCAATTTGGAGAAAATACTGTAGGGTGCTCTAGGATATGTCTTAAGGAGTCCAAGA
TTAATAATCACTTCTTGAACAAGCCGGGCATTCTTTTTTTAGCGGAATAACAGCAGGTTTGTGC
ATCAGTCACCAAACAAATAATATACCGGGCGCCTTCTCCATGTCAGCATTTGCGGAGGACAGCA
GTAAAAAGCCTTCCAGGCTAATCTAATCCAGAGCTCTGAATAGCAATCCCGATCTGGGGCGAGC
GCGTGAGGGCTGCTCCGGCTCCAGCCAGCAGAGGGCGCACTCCCACCCTCCGCGCGGCCTCGGG
ACCCAGTGGCTTGCTATCGCCTGGGTTGCTCCCGAGCACGCCCCCGCCCGCCGCGTCACGTGAC
ACCGCCACGGAACCTGAGGTGCGGGCCCTAAGCCGAGCTAAAGTCGTTGCTGGCGGCCGGGGCG
GGTGCAACCCCAGAGGCAGAACCGAAGACGAGTTGGGGAGGCCCGGGGAAGTCGATACTACCTC
TTCCCGGTCAGGTCGGCTCCCTGTCCCTTCCCACCATTCGCCGCTCGCGTCTCTTTAAGCGTTT
GCATGCGCTCTCTCGCGTGGGCAGGCCGGGGTGACCATGTAGCGGGAAAGCCCGAGGAAGCACG
GGTGCCTGGGACGAGCTCAGCGCTGACGGCACGCCGCTCCGGCGTCCCCTGCATCCCTCGCTGC
GGCCTGCGGGGTCCTGCTGGGAACCCCGGCCTCTCGAGGAGGCCTGGCCCCGAGAGCCGCCAAG
TCTCGCCGCGTCTCGCGAGAGTCCAAGTTGAGAACATGGCGACGTCTAATCTGTTAAAGAATAA
AGGTTCTCTCCAGTTTGAAGACAAGTGGGATTTCATGCGTCCAATTGTTTTGAAGCTTTTACGC
CAGGAATCTGTAACAAAGCAGCAGTGGTTTGATCTGTTTTCGGATGTACATGCTGTCTGTCTCT
GGGATGATAAAGGCTCATCAAAAATTCATCAGGCTTTAAAAGAAGATATCCTTGAATTTATTAA
GCAAGCACAGGCACGCGTACTGAGCCATCAAGATGACACAGCTTTGCTAAAGGCATATATTGTT
GAATGGCGAAAATTCTTCACCCAGTGCGATATTTTACCAAAACCTTTTTGTCAACTAGAGGTGA
CTTTATTGGGTAAACAAAGCAGCAATAAAAAATCAAATATGGAAGACAGTATTGTTCGAAAGCT
CATGCTTGATACGTGGAATGAGTCGATTTTTTCGAATATAAAGAACAGACTCCAGGATAGTGCA
ATGAAGCTGGTGCATGCTGAGAGATTAGGGGAAGCTTTTGATTCCCAGCTGGTCATAGGAGTGC
GAGAGTCCTATGTTAATCTTTGTTCTAATCCTGAGGACAAGCTTCAGATCTATAGGGATAATTT
TGAGAAGGCATATTTGGACTCAACAGAGAGATTTTATAGAACTCAGGCACCCTCATATTTACAG
CAAAATGGTGTACAGAATTACATGAAATATCTCATGGAATGCTGTGTGAACGCACTGGTGACCT
CATTTAAAGAGACTATTTTAGCAGAATGTCAAGGCATGATCAAGCGAAATGAAACTGAAAAGTT
ACATTTGATGTTTTCACTGATGGACAAAGTTCCTGGTGGGATCGAGCCCATGTTGAAGGATCTG
GAGGAGCACATCATAAGTGCTGGTCTAGCAGACATGGTGGCAGCTGCTGAAACCATCACCACTG
ACTCTGAGAAGTATGTGGAACAATTACTTACACTGTTCAATAGATTCAGTAAACTGGTCAAAGA
AGCTTTTCAGGATGATCCTCGTTTCCTTACTGCAAGAGATAAGGCGTATAAAGCAGTTGTTAAT
GATGCTACCATATTTAAACTTGAATTGCCTTTGAAGCAAAAAGGAGTGGGGTTGAAAACTCAGC
CTGAGTCAAAGTGCCCTGAGTTGCTTGCTAATTACTGTGACATGTTATTAAGGAAAACACCATT
AAGCAAAAAACTAACCTCTGAAGAGATTGAAGCAAAGCTTAAAGAAGTGCTCTTGGTACTTAAA
TATGTACAAAACAAAGATGTTTTTATGAGGTATCACAAAGCTCATCTTACCCGACGTCTCATAT
TGGACATCTCTGCTGATAGCGAGATTGAAGAAAACATGGTGGAGTGGCTAAGAGAAGTTGGTAT
GCCAGCAGATTATGTGAACAAACTTGCTAGAATGTTTCAGGACATAAAAGTATCTGAAGACTTG
AACCAAGCTTTTAAAGAAATGCATAAAAATAATAAGTTGGCATTACCAGCTGATTCAGTTAATA
TAAAGATTTTGAATGCTGGTGCTTGGTCTAGAAGCTCTGAGAAAGTCTTTGTCTCACTTCCTAC
TGAACTGGAGGATTTGATACCTGAAGTAGAAGAATTTTACAAAAAAAATCATAGTGGTAGAAAA
TTACATTGGCACCATCTCATGTCAAATGGAATTATAACATTTAAAAACGAAGTAGGTCAGTACG
ATTTGGAAGTAACCACGTTTCAGTTGGCTGTGTTGTTTGCATGGAACCAAAGACCTAGAGAGAA
AATCAGCTTTGAGAATCTAAAACTTGCAACGGAACTCCCTGATGCTGAACTTAGAAGGACTTTA
TGGTCTTTAGTAGCTTTTCCCAAGCTCAAACGGCAAGTTTTATTGTATGACCCTCAAGTCAATT
CACCCAAAGATTTTACAGAAGGCACCCTCTTCTCAGTCAACCAGGACTTTAGTTTAATAAAAAA
TGCAAAAGTACAGAAAAGGGGAAAAATCAATTTGATTGGACGCTTGCAGCTCACTACAGAACGG
ATGAGAGAAGAAGAAAATGAAGGAATAGTTCAACTAAGAATATTAAGAACCCAGGAAGCCATCA
TACAAATAATGAAAATGAGGAAGAAAATTAGCAATGCTCAGCTGCAGACTGAATTAGTAGAAAT
TTTGAAAAACATGTTCTTACCACAGAAGAAAATGATAAAAGAGCAAATCGAATGGCTGATCGAG
CACAAGTACATCAGGAGGGATGAGGCCGACATCAACACCTTCATATACATGGCGTAGCTGAATC
CAGCCTGCCGCAGCTACACATCTGGAGACCTGGGCAGAAGGTTGTCCCAGGCTGAGCTGGAGGA
AGGTTTATTTGGACTTTGATTACATAAATATTAAACTCTGCCTTACCTTACAAAGCGACTATAT
TTTGCCAGTCACATTAGTCAGCATGATGGCAATCCCTTCATGTTGCACACTCTTTAACAGCATG
CTGTTTTGTGGAGAAAATTGCATTCATGAAGAGCCCATTATGAACTTTCAAAGTCAATTCAATT
TTTACCCACCCAGAGAAATAACATTTTGGAAGGGTGAGGGTGGGGTTCCTTTTGCTTCTTTTAT
CCCCCTTTCCTCTTTAAAGGAATATACTTACACAAGGAAGGATTTTCAGATACTCATGCACTGA
GAAATGCTGGGGTTTTTTGTTGGTTTGTTATTTTTGGGTTTTTTTTTTTTTTTAATGCAATTAA
AGCTAGAGGCAGCACTCAGCTTCTTTTGATGCAGAGTGAATTGTCAACACTGTTGGGCAAGGGC
AGGCACACTTGAGAAGACAGTGTGCCAGTGTTGAGCTGTTTGTCAAACACTGCTTTCACTTTAG
TGACTGGATCTTAATGGTAACGGAAACTGGTATTAAATATTTCTACCTTACAAATGCTGATTTT
CACTGAGCAGGAGAGTGCTGTTTAGTCATTTGTTGTTAAACATGAAGATGTGGGATTTTCTTTT
TAGACTTTGTATGGCTGGAGAGCTTGTTTTGAAAACATGAAGTTTATAGTCAATGTTGTTTCAG
TTAAAAATTTATGGGTTTAGGTACATCACTGATTACAGAAATCAGAATCCCGAAGTAAACATGT
TAAGTGTGTTACTAATACACTTAATACTTATACACCTAATATTTACTATACTGTACCTAAATTT
GTTGAAAACAATGCAGAAATATTCTGATACAGTACAGTGAGAGAATTGCTTTCTTAACCTGTAG
CATAGAATTATTTGGTGATTGAAAGTGTTGTGATTAGGAATTTACCACCTCAGTTTTCTGGAAA
GACATTCTCTATTTAAAAGTAATAATTACCCGCCACTTAGCAGGAAGAAAGGTAAGATTACGAC
CTGCAACCTGCAAAGCACTCAAGAGTTGCTAGTCCTAACGTGAGCAGTAACCTTGCCAAATATG
TACATATATATTTATATATTTTAAAAATAAACATTTTTAAAATGTTTAGAGGGCAACACCTACC
TTGCTCCTCTCGTTAATCCAGAGCGGTGACTCAGGACCTCACAGACAGAGCAGTGGGAAGTTGG
AAACTGAGGACTCAAGCAACTGAAGAGAATTATTCCCCAGCAGGAAAGATGGCTCCCTGTGGAT
TTTTACTCATTGTGGTGCACGTTTCAAGTTTTCTTGCAAATTTTAGAACTTTTGATGTTAAGTA
GTATTTTGAAGTCTGGTTCTGAAGCTGACAGAACATGGAGTGTTGAGAAGCATACAGTAGAACA
CGAGTGTTGAAGCATACAGTAGAACACGGAGTGTTGAAGCATACAGTATTACATCACCACAGTG
GGCTGTGGGTTCGCCTGCTGCTCAGCTTGGGAGCTCCTTGCTGGAAGGAAATAAAGTATATGTT
AGATGTTTAAGGTTTTGATAATTATAGTCGAATATCTGTTCTGAAACTCATAGGAAGCTGGAGT
GCATGTGTGCTTCCCGTCTGCCCTGCAGCTCTGAGGTGATGTGGAGCAGGAGTGAAGAGCAAAC
TCAGTGCTTGCTGCCGTACCGCGTGGATGATGGTACATCCAGATTCAGAGGGATAGTTTTATAA
CGACTGTGGCCCTTCTGTTTAATAGCTTGGTGTTGGCAAATTTTCCTCTCCCAATACCAGAATG
CCAAAGGAAGAAACAATCAAGGGAAAAATTTTAGGCCATTTCTTAATGTTTAAGATTTGTCATT
TTAAACCATAATTTTTCTTAGAACATCTTTGAAATTTCTAATCGCTTTGGTCATTTAAGAATGA
GAGCTGCGATGTTTTGATTTATAAAGGCAAACTTAATGCAAAGTGGGTAACACTAAATCCATAG
CAAAGTTTTTTATTAAATTTTTATAAATTTTTTAATAGTTAATTATGTCCTAATTGTATTTTGG
GGAATGAGCAGCAGTAAATACCACAGACTTAACAGTTTTCATCCTTTTTTTAAAGTATATATAT
ACAAAAGTGTAACTACGTTTTGGTGTTTATCAAAACTATTTAGTTGACAAGGTGCCTATACCAT
TGTTGAGATTTTCTTTAAATGTTTTATGAATAGATTTGAAAATTTTAAAAAATCCTGAAACAGA
TCTTACACAGCAAGAGTTTTCTGAAGGTCCAGAACCACTGACACAGTGTTCCCTATCTGATCTC
TCTTCCCTGCAGACTTTATATTCTTGCTATCTGAGCAGGGCCAAACACGTCACAGGTGAGGGGA
GGGAAAGCCCAGCTTCCCACTCAACACCAGAGAGGCATTTTTAAATGAATGATGTGGCTTGCTC
AGAGGTTTGAGTACTTCTCTCTATCTTAGGTGGCACTGTCTGTAAATGCTAACCTGTCACCATC
TCACAGCCATAGTAAGGAGACGGAACAAATTCGCCCAGTGGAAAGGATAGACTCATCGATGTGT
ACAGTTAGACAAACATGAGGCCCTCATTCTAATAATTTTATAAGAATCTTCAACTAAATTCTGA
AGTCTCCCAATTTTTGCAGTTATTGGAGGAGATCCCTGAGTTTACCAGCCTGTTCATTGAAAGC
TCTTACTCTGTGCACAAATATTAAAGTCACCAAAAAAGTGAACTGTTAATCATTCTTATTTTTT
AAACTCCATTAGATTGACTGGTATCATTAGCTCTGCTGCAAGGGCACATTTTTCAATTCAATCT
GGTGATATATTTGCTAAGTCTACAGAAAGTTTGCTGTCATAAACTCAAGCTGGCTCTTCTGTCT
TTGTGTGAATGACTGGGATGCTGCCACAAGTTTTCCCAAGGTCACAGTTATGAGAGAAACATTG
TTTGAGAGCGTTCCTGTCATCTACACTATGTGTGGTCTGGAGTTCCTGAGGTGTAGTCTCTCGT
CCTGACCTGTACAGTTTTGAATGTGCACCACTCCATACTGAGATGACACTGTACAGTTTTCCAT
GGTAGCAGTTTCTGTATGCAGTAGGCTGAAATATTTTGATGAACTGCTTAATTTTTGGATTTTA
TTTTTTAAGTTGTATAATTTATTTTCTTGCAAAATAAAAGTGTAATATAAAACA

hide sequence

Protein Sequences


Protein RefSeqs	NP_073174	(Get FASTA)	NCBI Sequence Viewer
	XP_006243152	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF61416	(Get FASTA)	NCBI Sequence Viewer
	EDL95521	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000010956
	ENSRNOP00000097338
GenBank Protein	Q9JJ31	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_073174 ⟸ NM_022683

- UniProtKB:

Q9JJ31 (UniProtKB/Swiss-Prot), A0A8I6A7N3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGSSKIHQA
LKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVTLLGKQSSNKKS
NMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVRESYVNLCSNPE
DKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRRECN
SVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIIS
AGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFK
LELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKD
VFMRYHKAHLTRRLILDISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKE
MHKNNKLALPADSVNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHL
MSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAF
PKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEEN
EGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRR
DEADINTFIYMA

hide sequence

RefSeq Acc Id:	XP_006243152 ⟸ XM_006243090
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ASH3 (UniProtKB/TrEMBL), A0A0H2UHG3 (UniProtKB/TrEMBL), A6J4J8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSLAWAGRGDHVAGKPEEARVPGTSSALTARRSGVPCIPRCGLRGPAGNPGLSRRPGPESRQV SPRLARVQVENMATSNLLKNKGSLQFEDKWDFMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLW DDKGSSKIHQALKEDILEFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEVT LLGKQSSNKKSNMEDSIVRKLMLDTWNESIFSNIKNRLQDSAMKLVHAERLGEAFDSQLVIGVR ESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYLMECCVNALVTS FKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKDLEEHIISAGLADMVAAAETITTD SEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQP ESKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLIL DISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNI KILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYD LEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNS PKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII QIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA hide sequence

Ensembl Acc Id:

ENSRNOP00000010956 ⟸ ENSRNOT00000010956

Ensembl Acc Id:

ENSRNOP00000097338 ⟸ ENSRNOT00000114900

Ensembl Acc Id:

ENSRNOP00000089198 ⟸ ENSRNOT00000099521

Ensembl Acc Id:

ENSRNOP00000107439 ⟸ ENSRNOT00000125969

Protein Domains

Cullin family profile Cullin neddylation

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9JJ31-F1-model_v2	AlphaFold	Q9JJ31	1-780	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695972

Promoter ID:

EPDNEW_R6497

Type:

initiation region

Name:

Cul5_1

Description:

cullin 5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	58,253,684 - 58,253,744	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621742	AgrOrtholog
BioCyc Gene	G2FUF-30430	BioCyc
Ensembl Genes	ENSRNOG00000008039	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000010956	ENTREZGENE
	ENSRNOT00000114900	ENTREZGENE
Gene3D-CATH	1.10.10.10	UniProtKB/Swiss-Prot
	Cullin Repeats	UniProtKB/Swiss-Prot
	Cullin, Chain C, Domain 2	UniProtKB/Swiss-Prot
InterPro	Cullin	UniProtKB/Swiss-Prot
	Cullin_CS	UniProtKB/Swiss-Prot
	Cullin_homology	UniProtKB/Swiss-Prot
	Cullin_homology_sf	UniProtKB/Swiss-Prot
	Cullin_N	UniProtKB/Swiss-Prot
	Cullin_neddylation_domain	UniProtKB/Swiss-Prot
	Cullin_repeat-like_dom_sf	UniProtKB/Swiss-Prot
	WH-like_DNA-bd_sf	UniProtKB/Swiss-Prot
	WH_DNA-bd_sf	UniProtKB/Swiss-Prot
KEGG Report	rno:64624	UniProtKB/Swiss-Prot
NCBI Gene	64624	ENTREZGENE
PANTHER	PTHR11932	UniProtKB/Swiss-Prot
Pfam	Cullin	UniProtKB/Swiss-Prot
	Cullin_Nedd8	UniProtKB/Swiss-Prot
PhenoGen	Cul5	PhenoGen
PROSITE	CULLIN_1	UniProtKB/Swiss-Prot
	CULLIN_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000008039	RatGTEx
SMART	CULLIN	UniProtKB/Swiss-Prot
	Cullin_Nedd8	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF46785	UniProtKB/Swiss-Prot
	SSF74788	UniProtKB/Swiss-Prot
	SSF75632	UniProtKB/Swiss-Prot
UniProt	A0A0H2UHG3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A7N3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ASH3	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LU54_RAT	UniProtKB/TrEMBL
	A6J4J8	ENTREZGENE, UniProtKB/TrEMBL
	CUL5_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Cul5	cullin 5		vasopressin-activated calcium-mobilizing receptor protein	Name updated	1299863	APPROVED
2002-08-07	Cul5	vasopressin-activated calcium-mobilizing receptor protein			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in all tissues examined	632581
gene_product	member of the cullin gene family	632581

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)