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Gene: Pou2f2 (POU class 2 homeobox 2) Rattus norvegicus

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Symbol:

Pou2f2

Name:

POU class 2 homeobox 2

RGD ID:

621690

Description:

Enables DNA-binding transcription factor activity and sequence-specific DNA binding activity. Involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Orthologous to human POU2F2 (POU class 2 homeobox 2); INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

2-Oct; Oct2; POU domain, class 2, transcription factor 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	POU2F2 (POU class 2 homeobox 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, Panther
Mus musculus (house mouse):	Pou2f2 (POU domain, class 2, transcription factor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Pou2f2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	POU2F2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	POU2F2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pou2f2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	POU2F2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	POU2F2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pou2f2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Pou2f2 (POU class 2 homeobox 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	POU2F2 (POU class 2 homeobox 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	POU2F2 (POU class 2 homeobox 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pou2f2 (POU domain, class 2, transcription factor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Pou2f2 (POU domain, class 2, transcription factor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pou2f2a (POU class 2 homeobox 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pou2f2a (POU class 2 homeobox 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pou2f2a (POU class 2 homeobox 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pou2f2a (POU class 2 homeobox 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YOX1	Alliance	DIOPT (Hieranoid\|OrthoFinder)
Caenorhabditis elegans (roundworm):	ceh-18	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|PhylomeDB)
Caenorhabditis elegans (roundworm):	ceh-18	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	pdm2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector)
Drosophila melanogaster (fruit fly):	pdm2	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	nub	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	nub	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pou2f2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	pou2f2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	89,810,153 - 89,897,560 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	89,812,093 - 89,897,564 (-)	Ensembl				GRCr8
mRatBN7.2	1	80,682,330 - 80,769,756 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	80,685,741 - 80,724,261 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	86,079,615 - 86,116,737 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	94,630,479 - 94,667,543 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	87,835,383 - 87,872,505 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	81,966,791 - 82,049,116 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	81,964,104 - 82,004,538 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	83,221,982 - 83,263,207 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	80,405,061 - 80,442,677 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	75,132,314 - 75,169,426 (-)	NCBI		Celera
RGSC_v3.1	1	80,487,436 - 80,488,132 (-)	NCBI
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Familial Prostate Cancer (ISO)

Gastro-Enteropancreatic Neuroendocrine Tumor (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP,ISO)

17beta-estradiol 3-benzoate (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-hydroxynon-2-enal (ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (EXP,ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

amosite asbestos (ISO)

amphetamine (EXP)

antirheumatic drug (ISO)

aripiprazole (ISO)

Aroclor 1254 (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

buta-1,3-diene (ISO)

cadmium dichloride (EXP,ISO)

carbon nanotube (ISO)

chlorpyrifos (EXP)

choline (ISO)

cisplatin (EXP,ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

diazinon (ISO)

diclofenac (ISO)

dimethylarsinic acid (ISO)

doxorubicin (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

folic acid (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

GSK-J4 (ISO)

ionomycin (ISO)

L-methionine (ISO)

lead diacetate (EXP)

lead(0) (EXP)

methoxychlor (EXP)

methylarsonic acid (ISO)

N,N-diethyl-m-toluamide (EXP)

N-nitrosodiethylamine (ISO)

nickel atom (ISO)

nitrates (ISO)

okadaic acid (ISO)

omeprazole (EXP,ISO)

ozone (ISO)

perfluorohexanesulfonic acid (ISO)

permethrin (EXP)

phorbol 13-acetate 12-myristate (ISO)

piperonyl butoxide (ISO)

pyrrolidine dithiocarbamate (ISO)

serpentine asbestos (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

succimer (ISO)

testosterone (EXP)

thiram (ISO)

trametinib (ISO)

trimellitic anhydride (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vorinostat (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell maturation (ISO)

cellular response to virus (ISO)

mature B cell differentiation (ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of interleukin-6 production (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of DNA-templated transcription (IDA,IEA,ISO)

regulation of transcription by RNA polymerase II (IBA,IEA)

spermidine transmembrane transport (IEA)

spermidine transport (ISO)

Cellular Component

nucleoplasm (ISO)

nucleus (IEA,ISO)

Molecular Function

DNA binding (IEA,ISO)

DNA-binding transcription activator activity, RNA polymerase II-specific (ISO)

DNA-binding transcription factor activity (IDA,IEA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IEA)

protein binding (ISO)

protein domain specific binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,ISO)

sequence-specific DNA binding (IDA,ISO)

sequence-specific double-stranded DNA binding (ISO)

spermidine transmembrane transporter activity (ISO)

transcription cis-regulatory region binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Sp1- and octamer-consensus sequence binding proteins during lens fibre differentiation.	Brunekreef GA, etal., Exp Eye Res. 1997 Mar;64(3):295-9.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Agmatine is efficiently transported by non-neuronal monoamine transporters extraneuronal monoamine transporter (EMT) and organic cation transporter 2 (OCT2).	Grundemann D, etal., J Pharmacol Exp Ther 2003 Feb;304(2):810-7.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:2011512	PMID:2904654	PMID:7720710	PMID:7902581	PMID:8096198	PMID:9242494	PMID:11937630	PMID:12963498	PMID:14978099	PMID:15830901	PMID:17141158	PMID:24282026
PMID:36942826

Genomics

Comparative Map Data

Pou2f2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	89,810,153 - 89,897,560 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	89,812,093 - 89,897,564 (-)	Ensembl				GRCr8
mRatBN7.2	1	80,682,330 - 80,769,756 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	80,685,741 - 80,724,261 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	86,079,615 - 86,116,737 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	94,630,479 - 94,667,543 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	87,835,383 - 87,872,505 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	81,966,791 - 82,049,116 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	81,964,104 - 82,004,538 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	83,221,982 - 83,263,207 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	80,405,061 - 80,442,677 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	75,132,314 - 75,169,426 (-)	NCBI		Celera
RGSC_v3.1	1	80,487,436 - 80,488,132 (-)	NCBI
Cytogenetic Map	1	q21	NCBI

POU2F2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	42,086,110 - 42,197,936 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	42,086,110 - 42,196,585 (-)	Ensembl			hg38	GRCh38
GRCh37	19	42,590,262 - 42,681,458 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	47,284,490 - 47,328,470 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	19	47,286,962 - 47,340,851	NCBI
Celera	19	39,392,269 - 39,436,244 (-)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	39,021,179 - 39,067,533 (-)	NCBI		HuRef
CHM1_1	19	42,591,913 - 42,638,310 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	44,905,480 - 45,017,310 (-)	NCBI		T2T-CHM13v2.0

Pou2f2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	24,790,111 - 24,879,292 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	24,786,769 - 24,879,151 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	25,087,350 - 25,180,797 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	25,087,344 - 25,179,726 (-)	Ensembl			mm10	GRCm38
MGSCv37	7	25,876,133 - 25,917,479 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	24,801,410 - 24,841,220 (-)	NCBI		MGSCv36	mm8
Celera	7	19,706,926 - 19,748,008 (-)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	13.73	NCBI

Pou2f2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955555	759,308 - 793,485 (+)	Ensembl
ChiLan1.0	NW_004955555	759,308 - 793,500 (+)	NCBI	ChiLan1.0	ChiLan1.0

POU2F2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	48,195,821 - 48,282,469 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	50,064,437 - 50,151,111 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	38,974,635 - 39,065,103 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	47,568,984 - 47,656,779 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	47,570,891 - 47,611,589 (-)	Ensembl			panPan2	panpan1.1

POU2F2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	112,165,908 - 112,252,712 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	112,220,511 - 112,321,672 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	111,591,662 - 111,683,545 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	112,778,144 - 112,870,311 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	112,794,137 - 112,870,772 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	112,332,338 - 112,427,890 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	111,968,203 - 112,064,377 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	112,894,838 - 112,990,619 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Pou2f2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	15,973,218 - 16,049,253 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936706	320,539 - 392,414 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936706	335,613 - 393,854 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POU2F2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	49,727,012 - 49,825,816 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	49,791,937 - 49,829,771 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

POU2F2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	36,292,252 - 36,382,354 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	36,295,275 - 36,336,013 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	14,532,266 - 14,579,407 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pou2f2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624907	604,637 - 635,296 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624907	564,553 - 638,020 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Pou2f2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	169,531,289 - 169,616,279 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Pou2f2
511 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	310
Count of miRNA genes:	139
Interacting mature miRNAs:	151
Transcripts:	ENSRNOT00000027649, ENSRNOT00000046678, ENSRNOT00000048002
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	81269860	99645535	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
4889962	Bss94	Bone structure and strength QTL 94	3.8		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	51909206	91302615	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat

Markers in Region

POU2F2

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	80,691,790 - 80,692,179 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	81,971,426 - 81,971,814	NCBI	Rnor6.0
Rnor_5.0	1	83,231,431 - 83,231,819	UniSTS	Rnor5.0
RGSC_v3.4	1	80,409,733 - 80,410,121	UniSTS	RGSC3.4
Celera	1	75,136,984 - 75,137,372	UniSTS
Cytogenetic Map	1	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	8	60	162	91	90	59	92	59	6	345	185	11	141	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001271204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039078078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039112962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039113307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267183	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267218	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC114696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ225995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L25863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X67302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000084569 ⟹ ENSRNOP00000075463

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,812,093 - 89,852,066 (-)	Ensembl
mRatBN7.2 Ensembl	1	80,687,761 - 80,724,261 (-)	Ensembl
Rnor_6.0 Ensembl	1	81,967,274 - 82,003,691 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000087572 ⟹ ENSRNOP00000072745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,814,144 - 89,852,102 (-)	Ensembl
mRatBN7.2 Ensembl	1	80,685,741 - 80,724,261 (-)	Ensembl
Rnor_6.0 Ensembl	1	81,964,104 - 82,004,538 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103845 ⟹ ENSRNOP00000089154

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,814,144 - 89,897,564 (-)	Ensembl
mRatBN7.2 Ensembl	1	80,687,124 - 80,714,199 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104344 ⟹ ENSRNOP00000084371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,814,144 - 89,852,218 (-)	Ensembl
mRatBN7.2 Ensembl	1	80,685,741 - 80,695,691 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118587 ⟹ ENSRNOP00000081328

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,814,144 - 89,852,803 (-)	Ensembl
mRatBN7.2 Ensembl	1	80,687,124 - 80,724,261 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000137877 ⟹ ENSRNOP00000101660

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,812,409 - 89,852,803 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000147093 ⟹ ENSRNOP00000107534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	89,814,144 - 89,852,398 (-)	Ensembl

RefSeq Acc Id:

NM_001271204 ⟹ NP_001258133

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,814,951 - 89,852,066 (-)	NCBI
mRatBN7.2	1	80,687,115 - 80,724,240 (-)	NCBI
Rnor_6.0	1	81,966,791 - 82,003,691 (-)	NCBI
Rnor_5.0	1	83,221,982 - 83,263,207 (-)	NCBI
Celera	1	75,132,314 - 75,169,426 (-)	NCBI

Sequence:

show sequence

ATGGTTCACTCCAGCATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGC
AAAGTCTGGACTCCCCGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCA
GAACCCCCAGAACAAAGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAG
GCTGAAGACCCCAGTGGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTC
ATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCT
CCAGCTCCAACAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTG
CCACAAGCGCAGCAGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGC
AAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCTCGAAATG
CTTGGAGCCACCATCCCACCCGGAGGAGCCCAGTGATCTGGAGGAGCTGGAACAGTTCGCTCGC
ACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCA
AGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTTAACCTGAGCTT
CAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCT
GTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGC
CGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAG
TTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATTGCAGAGCAGCTGCACATG
GAAAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTT
GCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGTTACAGCCCGCACCTGGTCAC
ACCCCAAGGGGGCGCAGGAACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTT
ACTACCTTATCCTCAGCTGTGGGGACACTCCACCCCAGCCGGACAGCAGGAGGGGGTGGCGGTG
GGGGCGGAGCCGCGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCAC
CAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGACGGGCCTGAACCCC
AGCGCAGGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTG
GTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGA
ACCACACCGGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGC
AGCTGTGGCAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCTTCGTCTTCATCCTCCTCC
TCCTCCTCCACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAG
GGTCCAAGGCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTG
GTCCCCTGCCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGGATCCTCGGAGCAGGAGT
GACGAAGGAGGAAAAGACCAAAAATCCAACCAAAAACAAAAACAAACAAACAAACAAACAAAAG
GAAACCAACCAACAAAAAA

hide sequence

RefSeq Acc Id:

XM_006228371 ⟹ XP_006228433

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,299 (-)	NCBI
Rnor_6.0	1	81,966,791 - 82,003,740 (-)	NCBI
Rnor_5.0	1	83,221,982 - 83,263,207 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTC
CACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCA
GTGGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGC
CCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAG
CTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGC
AGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGC
TCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCTCGAAATGCTTGGAGCCACCA
TCCCACCCGGAGGAGCCCAGTGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAAC
GCCGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAA
CGACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGT
AAACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCC
TACCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACG
CAAGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAAC
CAGAAGCCTACCTCAGAGGAGATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGA
TCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCC
CATGCTGCCCAGCCCGGGAAAGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGC
GCAGGAACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCT
CAGCTGTGGGGACACTCCATCCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGC
GCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAAC
CCGAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGCCCTG
GCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGGGGCAG
CCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGGCT
GCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGGCAGCG
ACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTCCACTT
GCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAGGCCGA
GTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTGCCCAA
GAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGGATCCTCGGAGCAGGAGTGACGAAGGAGGAA
AAGACCAAAAATCCAACCAAAAACAAAAACAAACAAACAAACAAACAAAAGGAAACCAACCAAC
AAAAAA

hide sequence

RefSeq Acc Id:

XM_006228372 ⟹ XP_006228434

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,127 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,298 (-)	NCBI
Rnor_6.0	1	81,966,791 - 82,003,740 (-)	NCBI
Rnor_5.0	1	83,221,982 - 83,263,207 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAGT
GGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCC
AACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAGCT
GGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGCAG
AGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTC
TCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGGCTATGACTCGCCCCACGCTGCCCGA
CCCGCACCTCTCACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCC
AGTGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCT
TCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGAC
CATTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTG
GAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGC
TGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCAT
CGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAG
GAGATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCA
ACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGG
AAAGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTG
TCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCC
ATCCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCAT
CCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGC
CACTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGCCCTGGCCTCTGGTGGAACCCTG
CCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGA
GCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGGCTGCCCCTGCTCAGTGCCCC
ACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGGCAGCGACCATCTCCAGCAAGTCT
CCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTCCACTTGCAGTGAAGTGGCAGCGC
AGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAGGCCGAGTGAGAGCCCACCATGCC
TCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTGCCCAAGAGAGGGTGAGGAGGCTG
GTGGGGGATACAGTGGATCCTCGGAGCAGGAGTGACGAAGGAGGAAAAGACCAAAAATCCAACC
AAAAACAAAAACAAACAAACAAACAAACAAAAGGAAACCAACCAACAAAAAA

hide sequence

RefSeq Acc Id:

XM_017588679 ⟹ XP_017444168

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,897,560 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,769,756 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,049,116 (-)	NCBI

Sequence:

show sequence

GCGGGAGCGGGAGCGGGAGCGGGGGTAGCGTTGGCGGCGGCGGCTCCTCCTCGGCCATCCCCTC
GGAGCCGTGCAGCTGACGCGCATGGCGAAGACAGCGGCGCCTACCGATGGGAGCAGCGGTTCTC
GGCTGGACCGGGTTGGTGGCCTGAATGTATTAGCTTTGCTCCGTCTGCCCAAGAGAAATAAGAA
TGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCCCGTCAGAGCACACAGACACTGA
AAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAAAGCGTCCCCATTCTCTGTGTCC
CCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTCCACTTAACATTCTGGGGTCCCG
GACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCAGTGGTGATTCAGCCCCAGCAGC
ACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCCAACTCATGTTGACGGGCAGC
CAGCTAGCTGGGCTCTCAGCGCTGATACCTGCCCAGCAGCAGCTTCTCCTTCAGCAAGCTCAGG
CCCAGCTGCTGGCCGCCGCGGTCCAGCAGTCCAACGCCGCTGCCGCCAACGCTGCTGCCGCTGC
CGCTGCCGCCTCCACCTCCTCCTCCACCTCTTCTGCCTCCTCCTCCACCTCGCAGACCCCAGCC
TCTTCTGGGGGAGGCGACCTGCCGCCATCACAGCCTACCAGCCAGCCCCCAGGGACCCCACAGC
TCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGACATACAGCAACTCCTCCAGCTCCAACA
GCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAG
CAGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAG
CTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCTCCATCCGGGTCCTCGATCCTG
CATCCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCCCACGCTGCCCGACCCGCACCTC
TCACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCCAGTGATCTGG
AGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGG
TGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGC
TTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGC
TCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCC
CAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAAT
GTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGC
TGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCA
GAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACC
AGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTGTCCCAAGCTT
CTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCCATCCCAGCCG
GACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCATCCCCTCTGTC
ACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTA
TCGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACAATGGTGGGGTTGAGCTCGGGGCTGAG
CCCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCCAAGGTGCGTGCTGCCTCATGTCACCC
CATTGCCACCAGTCCTGCCCTCTCCTGGGCCTCGAGGCCCCCTCCCCATTGCTGCCCCAGCCAT
GCCATCCTGCCCTCCCGCTCACTGCATTGCTCGCCTGTTCATCACCATCTGTCTTCGGGGAAGG
TGTGAGGGTGCTGCTTCTTGGGAGTCAGTGGGACAGACAGGAGATGGGCTGTTCAGGCAGGGTC
CACAGAGGCCAAGGTCTCCCTGGCCTGATGTACCTCCAGCTCAGCCTCTCTTTCTCCTCACCAG
CCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGG
GGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACC
GGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGG
CAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTC
CACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAG
GCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTG
CCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGG

hide sequence

RefSeq Acc Id:

XM_017588682 ⟹ XP_017444171

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,302 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTC
CACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCA
GTGGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGC
CCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAG
CTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGC
AGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGC
TCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCTCCATCCGGGTCCTCGATCCTGC
ATCCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCCCACGCTGCCCGACCCGCACCTCT
CACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCCAGTGATCTGGA
GGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGT
GATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCT
TCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCT
CAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCC
AGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATG
TCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCT
GATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAG
AAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCA
GTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTGTCCCAAGCTTC
TAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCCATCCCAGCCGG
ACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCATCCCCTCTGTCA
CTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTAT
CGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACAATGGTGGGGTTGAGCTCGGGGCTGAGC
CCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCCAAGGTGCGTGCTGCCTCATGTCACCCC
ATTGCCACCAGTCCTGCCCTCTCCTGGGCCTCGAGGCCCCCTCCCCATTGCTGCCCCAGCCATG
CCATCCTGCCCTCCCGCTCACTGCATTGCTCGCCTGTTCATCACCATCTGTCTTCGGGGAAGGT
GTGAGGGTGCTGCTTCTTGGGAGTCAGTGGGACAGACAGGAGATGGGCTGTTCAGGCAGGGTCC
ACAGAGGCCAAGGTCTCCCTGGCCTGATGTACCTCCAGCTCAGCCTCTCTTTCTCCTCACCAGC
CCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGGG
GCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACCG
GGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGGC
AGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTCC
ACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAGG
CCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTGC
CCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGG

hide sequence

RefSeq Acc Id:

XM_017588683 ⟹ XP_017444172

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,303 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGTGGGCATTCTCTCTGGCCTC
CACTTAACATTCTGGGGTCCCGGACCCTGCCTCTCTCCTCCCCAGATCAAGGCTGAAGACCCCA
GTGGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGC
CCAACTCATGTTGACGGGCAGCCAGCTAGCTGGGCTCTCAGCGCTGATACCTGCCCAGCAGCAG
CTTCTCCTTCAGCAAGCTCAGGCCCAGCTGCTGGCCGCCGCGGTCCAGCAGTCCAACGCCGCTG
CCGCCAACGCTGCTGCCGCTGCCGCTGCCGCCTCCACCTCCTCCTCCACCTCTTCTGCCTCCTC
CTCCACCTCGCAGACCCCAGCCTCTTCTGGGGGAGGCGACCTGCCGCCATCACAGCCTACCAGC
CAGCCCCCAGGGACCCCACAGCTCACCTTGTCCCAACCCATCCAGCTCACAGCACAGGACATAC
AGCAACTCCTCCAGCTCCAACAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCA
GTTCCTGCTGCCACAAGCGCAGCAGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAG
CTACCTCAGCAAACCCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGC
TCCATCCGGGTCCTCGATCCTGCATCCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCC
CACGCTGCCCGACCCGCACCTCTCACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCAC
CCGGAGGAGCCCAGTGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCA
TCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTT
CAGCCAAACGACCATTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTC
AAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCA
GCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAA
GAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAG
CCTACCTCAGAGGAGATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCG
TCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCT
GCCCAGCCCGGGAAAGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGA
ACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTG
TGGGGACACTCCATCCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCC
CCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGC
CCTCAAGGCAGCCACTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACAATGG
TGGGGTTGAGCTCGGGGCTGAGCCCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCCAAGC
CCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGGG
GCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACCG
GGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGGC
AGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTCC
ACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAGG
CCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTGC
CCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGG

hide sequence

RefSeq Acc Id:

XM_017588685 ⟹ XP_017444174

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,301 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAGT
GGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCC
AACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAGCT
GGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGCAG
AGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTC
TCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCTCGAAATGCTTGGAGCCACCATC
CCACCCGGAGGAGCCCAGTGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGC
CGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACG
ACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAA
ACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTA
CCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCA
AGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCA
GAAGCCTACCTCAGAGGAGATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATC
CGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCA
TGCTGCCCAGCCCGGGAAAGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGC
AGGAACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCA
GCTGTGGGGACACTCCATCCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGC
CCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCC
GAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACA
ATGGTGGGGTTGAGCTCGGGGCTGAGCCCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCC
AAGGTGCGTGCTGCCTCATGTCACCCCATTGCCACCAGTCCTGCCCTCTCCTGGGCCTCGAGGC
CCCCTCCCCATTGCTGCCCCAGCCATGCCATCCTGCCCTCCCGCTCACTGCATTGCTCGCCTGT
TCATCACCATCTGTCTTCGGGGAAGGTGTGAGGGTGCTGCTTCTTGGGAGTCAGTGGGACAGAC
AGGAGATGGGCTGTTCAGGCAGGGTCCACAGAGGCCAAGGTCTCCCTGGCCTGATGTACCTCCA
GCTCAGCCTCTCTTTCTCCTCACCAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTT
GATAGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAA
CCTCGCCTCTCTTCTTGAACCACACCGGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCT
GGTCTCAGCAGCGGCTGCAGCTGTGGCAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCC
TCGTCTTCATCCTCCTCCTCCTCCTCCACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCC
CGGGGGGACCCGAGGCAGGGTCCAAGGCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCT
CTGAGTCCCCTGACCTTGGTCCCCTGCCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTG
G

hide sequence

RefSeq Acc Id:

XM_017588686 ⟹ XP_017444175

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,302 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGACATACAGCAACTCCTCCAG
CTCCAACAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCAC
AAGCGCAGCAGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAAC
CCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCTCCATCCGGGTCCT
CGATCCTGCATCCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCCCACGCTGCCCGACC
CGCACCTCTCACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCCAG
TGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTC
ACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCA
TTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGA
GAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTG
AGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCG
AGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGA
GATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCAAC
CGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAA
AGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTGTC
CCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCCAT
CCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCATCC
CCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCA
CTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACAATGGTGGGGTTGAGCTCG
GGGCTGAGCCCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCCAAGGTGCGTGCTGCCTCA
TGTCACCCCATTGCCACCAGTCCTGCCCTCTCCTGGGCCTCGAGGCCCCCTCCCCATTGCTGCC
CCAGCCATGCCATCCTGCCCTCCCGCTCACTGCATTGCTCGCCTGTTCATCACCATCTGTCTTC
GGGGAAGGTGTGAGGGTGCTGCTTCTTGGGAGTCAGTGGGACAGACAGGAGATGGGCTGTTCAG
GCAGGGTCCACAGAGGCCAAGGTCTCCCTGGCCTGATGTACCTCCAGCTCAGCCTCTCTTTCTC
CTCACCAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTG
GTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGA
ACCACACCGGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGC
AGCTGTGGCAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCC
TCCTCCTCCACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAG
GGTCCAAGGCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTG
GTCCCCTGCCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGG

hide sequence

RefSeq Acc Id:

XM_017588687 ⟹ XP_017444176

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,300 (-)	NCBI
Rnor_6.0	1	81,966,891 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAGT
GGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCC
AACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAGCT
GGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGCAG
AGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTC
TCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCCCTCGAAATGCTTGGAGCCACCATC
CCACCCGGAGGAGCCCAGTGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGC
CGCATCAAGCTGGGCTTCACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACG
ACTTCAGCCAAACGACCATTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAA
ACTCAAGCCCCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTA
CCCAGCCCAAACCAGCTGAGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCA
AGAAGAGGACCAGCATCGAGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCA
GAAGCCTACCTCAGAGGAGATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATC
CGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCA
TGCTGCCCAGCCCGGGAAAGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGC
AGGAACCTTACCATTGTCCCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCA
GCTGTGGGGACACTCCATCCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGC
CCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCC
GAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGAAGCACA
ATGGTGGGGTTGAGCTCGGGGCTGAGCCCAGCCCTCATGGGCAACAACCCTTTGGCCACTATCC
AAGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCT
GGGGGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCAC
ACCGGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTG
TGGCAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTC
CTCCACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCC
AAGGCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCC
CTGCCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAGTGG

hide sequence

RefSeq Acc Id:

XM_017588688 ⟹ XP_017444177

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,299 (-)	NCBI
Rnor_6.0	1	81,966,791 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGATCAAGGCTGAAGACCCCAGT
GGTGATTCAGCCCCAGCAGCACCCCCGCCCCCCCAGCCGGCTCAGCCTCATCTGCCCCAGGCCC
AACTCATGTTGACGGGCAGCCAGCTAGCTGGGGACATACAGCAACTCCTCCAGCTCCAACAGCT
GGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCACAAGCGCAGCAG
AGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTC
TCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCTCCATCCGGGTCCTCGATCCTGCAT
CCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCCCACGCTGCCCGACCCGCACCTCTCA
CACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCCAGTGATCTGGAGG
AGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACACAGGGTGA
TGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCATTTCCCGCTTC
GAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGAGAAGTGGCTCA
ACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTGAGCAGCCCCAG
CCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCGAGACGAATGTC
CGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGA
TTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAA
GGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAAAGCCGACCAGT
TACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTGTCCCAAGCTTCTA
GCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCCATCCCAGCCGGAC
AGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCATCCCCTCTGTCACT
CCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCACTCGGCTATCG
GCTTGACGGGCCTGAACCCCAGCGCAGGCCCTGGCCTCTGGTGGAACCCTGCCCCTTACCAGCC
TTGATAGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGCCCCAGCCTAGT
AACCTCGCCTCTCTTCTTGAACCACACCGGGCTGCCCCTGCTCAGTGCCCCACCAGGCGTGGGT
CTGGTCTCAGCAGCGGCTGCAGCTGTGGCAGCGACCATCTCCAGCAAGTCTCCTGGCCTCTCCT
CCTCGTCTTCATCCTCCTCCTCCTCCTCCACTTGCAGTGAAGTGGCAGCGCAGACCTCTGGAGG
CCCGGGGGGACCCGAGGCAGGGTCCAAGGCCGAGTGAGAGCCCACCATGCCTCCCCTCCTACTC
CTCTGAGTCCCCTGACCTTGGTCCCCTGCCCAAGAGAGGGTGAGGAGGCTGGTGGGGGATACAG
TGGATCCTCGGAGCAGGAGTGACGAAGGAGGAAAAGACCAAAAATCCAACCAAAAACAAAAACA
AACAAACAAACAAACAAAAGGAAACCAACCAACAAAAAA

hide sequence

RefSeq Acc Id:

XM_017588689 ⟹ XP_017444178

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,300 (-)	NCBI
Rnor_6.0	1	81,966,791 - 82,003,740 (-)	NCBI

Sequence:

show sequence

AGGGCGGGGAGATGACAAAGTTGTTCCCCAGCCCTGGCTGGCGGGCAGCATGGTTCATTCCAGC
ATGGGGGCTCCAGAAATAAGAATGTCTAAGCCCCTGGAGGCCGAGAAGCAAAGTCTGGACTCCC
CGTCAGAGCACACAGACACTGAAAGAAATGGACCCGACATTAACCATCAGAACCCCCAGAACAA
AGCGTCCCCATTCTCTGTGTCCCCAACTGGCCCCAGCACCAAGGACATACAGCAACTCCTCCAG
CTCCAACAGCTGGTGCTTGTCCCCGGCCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCAC
AAGCGCAGCAGAGTCAGCCAGGGCTGCTACCAACGCCAAATCTATTCCAGCTACCTCAGCAAAC
CCAGGGAGCTCTCCTGACCTCCCAGCCCCGGGCTGGGCTTCCTACACAGCTCCATCCGGGTCCT
CGATCCTGCATCCCATCCACCTGCCCACCTTACCAGGCTATGACTCGCCCCACGCTGCCCGACC
CGCACCTCTCACACCCGCAGCCCTCGAAATGCTTGGAGCCACCATCCCACCCGGAGGAGCCCAG
TGATCTGGAGGAGCTGGAACAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTC
ACACAGGGTGATGTGGGCCTGGCCATGGGCAAGCTCTATGGCAACGACTTCAGCCAAACGACCA
TTTCCCGCTTCGAGGCCCTTAACCTGAGCTTCAAGAACATGTGTAAACTCAAGCCCCTCCTGGA
GAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGATTCAAGCCTACCCAGCCCAAACCAGCTG
AGCAGCCCCAGCCTGGGTTTCGACGGGCTGCCGGGGCGGAGACGCAAGAAGAGGACCAGCATCG
AGACGAATGTCCGCTTCGCCTTAGAGAAGAGTTTCCTAGCGAACCAGAAGCCTACCTCAGAGGA
GATCCTGCTGATTGCAGAGCAGCTGCACATGGAAAAGGAAGTGATCCGCGTCTGGTTCTGCAAC
CGGCGCCAGAAGGAGAAACGCATCAACCCTTGCAGTGCGGCCCCCATGCTGCCCAGCCCGGGAA
AGCCGACCAGTTACAGCCCGCACCTGGTCACACCCCAAGGGGGCGCAGGAACCTTACCATTGTC
CCAAGCTTCTAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACACTCCAT
CCCAGCCGGACAGCAGGAGGGGGTGGCGGTGGGGGCGGAGCCGCGCCCCCCCTCAATTCCATCC
CCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAACCCGAGCCCTCAAGGCAGCCA
CTCGGCTATCGGCTTGACGGGCCTGAACCCCAGCGCAGGCCCTGGCCTCTGGTGGAACCCTGCC
CCTTACCAGCCTTGATAGCAGCGGGAACCTGGTGCTGGGGGCAGCCGGTGCGGCCCCAGGGAGC
CCCAGCCTAGTAACCTCGCCTCTCTTCTTGAACCACACCGGGCTGCCCCTGCTCAGTGCCCCAC
CAGGCGTGGGTCTGGTCTCAGCAGCGGCTGCAGCTGTGGCAGCGACCATCTCCAGCAAGTCTCC
TGGCCTCTCCTCCTCGTCTTCATCCTCCTCCTCCTCCTCCACTTGCAGTGAAGTGGCAGCGCAG
ACCTCTGGAGGCCCGGGGGGACCCGAGGCAGGGTCCAAGGCCGAGTGAGAGCCCACCATGCCTC
CCCTCCTACTCCTCTGAGTCCCCTGACCTTGGTCCCCTGCCCAAGAGAGGGTGAGGAGGCTGGT
GGGGGATACAGTGGATCCTCGGAGCAGGAGTGACGAAGGAGGAAAAGACCAAAAATCCAACCAA
AAACAAAAACAAACAAACAAACAAACAAAAGGAAACCAACCAACAAAAAA

hide sequence

RefSeq Acc Id:

XM_039078078 ⟹ XP_038934006

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,815,945 - 89,852,128 (-)	NCBI
mRatBN7.2	1	80,688,109 - 80,724,299 (-)	NCBI

RefSeq Acc Id:

XM_039112962 ⟹ XP_038968890

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,303 (-)	NCBI

RefSeq Acc Id:

XM_039113004 ⟹ XP_038968932

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,843,886 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,715,019 (-)	NCBI

RefSeq Acc Id:

XM_039113041 ⟹ XP_038968969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,877,911 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,750,086 (-)	NCBI

RefSeq Acc Id:

XM_039113050 ⟹ XP_038968978

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,021 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,717,402 (-)	NCBI

RefSeq Acc Id:

XM_039113067 ⟹ XP_038968995

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,303 (-)	NCBI

RefSeq Acc Id:

XM_039113091 ⟹ XP_038969019

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,303 (-)	NCBI

RefSeq Acc Id:

XM_039113129 ⟹ XP_038969057

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,303 (-)	NCBI

RefSeq Acc Id:

XM_039113188 ⟹ XP_038969116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,301 (-)	NCBI

RefSeq Acc Id:

XM_039113307 ⟹ XP_038969235

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI
mRatBN7.2	1	80,682,330 - 80,724,302 (-)	NCBI

RefSeq Acc Id:

XM_063266973 ⟹ XP_063123043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,130 (-)	NCBI

RefSeq Acc Id:

XM_063267012 ⟹ XP_063123082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI

RefSeq Acc Id:

XM_063267045 ⟹ XP_063123115

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI

RefSeq Acc Id:

XM_063267129 ⟹ XP_063123199

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI

RefSeq Acc Id:

XM_063267183 ⟹ XP_063123253

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI

RefSeq Acc Id:

XM_063267218 ⟹ XP_063123288

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI

RefSeq Acc Id:

XM_063267312 ⟹ XP_063123382

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI

RefSeq Acc Id:

XM_063267339 ⟹ XP_063123409

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,129 (-)	NCBI

RefSeq Acc Id:

XM_063267524 ⟹ XP_063123594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	89,810,153 - 89,852,128 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001258133	(Get FASTA)	NCBI Sequence Viewer
	XP_006228433	(Get FASTA)	NCBI Sequence Viewer
	XP_006228434	(Get FASTA)	NCBI Sequence Viewer
	XP_017444168	(Get FASTA)	NCBI Sequence Viewer
	XP_017444171	(Get FASTA)	NCBI Sequence Viewer
	XP_017444172	(Get FASTA)	NCBI Sequence Viewer
	XP_017444174	(Get FASTA)	NCBI Sequence Viewer
	XP_017444175	(Get FASTA)	NCBI Sequence Viewer
	XP_017444176	(Get FASTA)	NCBI Sequence Viewer
	XP_017444177	(Get FASTA)	NCBI Sequence Viewer
	XP_017444178	(Get FASTA)	NCBI Sequence Viewer
	XP_038934006	(Get FASTA)	NCBI Sequence Viewer
	XP_038968890	(Get FASTA)	NCBI Sequence Viewer
	XP_038968932	(Get FASTA)	NCBI Sequence Viewer
	XP_038968969	(Get FASTA)	NCBI Sequence Viewer
	XP_038968978	(Get FASTA)	NCBI Sequence Viewer
	XP_038968995	(Get FASTA)	NCBI Sequence Viewer
	XP_038969019	(Get FASTA)	NCBI Sequence Viewer
	XP_038969057	(Get FASTA)	NCBI Sequence Viewer
	XP_038969116	(Get FASTA)	NCBI Sequence Viewer
	XP_038969235	(Get FASTA)	NCBI Sequence Viewer
	XP_063123043	(Get FASTA)	NCBI Sequence Viewer
	XP_063123082	(Get FASTA)	NCBI Sequence Viewer
	XP_063123115	(Get FASTA)	NCBI Sequence Viewer
	XP_063123199	(Get FASTA)	NCBI Sequence Viewer
	XP_063123253	(Get FASTA)	NCBI Sequence Viewer
	XP_063123288	(Get FASTA)	NCBI Sequence Viewer
	XP_063123382	(Get FASTA)	NCBI Sequence Viewer
	XP_063123409	(Get FASTA)	NCBI Sequence Viewer
	XP_063123594	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA41734	(Get FASTA)	NCBI Sequence Viewer
	CAA47715	(Get FASTA)	NCBI Sequence Viewer
	EDM08043	(Get FASTA)	NCBI Sequence Viewer
	EDM08044	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000072745
	ENSRNOP00000072745.3
	ENSRNOP00000075463.3
	ENSRNOP00000081328
	ENSRNOP00000081328.2
	ENSRNOP00000084371
	ENSRNOP00000084371.2
	ENSRNOP00000089154
	ENSRNOP00000089154.2
	ENSRNOP00000101660
	ENSRNOP00000101660.1
	ENSRNOP00000107534
	ENSRNOP00000107534.1

RefSeq Acc Id:

NP_001258133 ⟸ NM_001271204

- UniProtKB:

A0A8I6A6L7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIK
AEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLL
PQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPSKCLEPPSHPEEPSDLEELEQFAR
TFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMS
VDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHM
EKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTV
TTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNP
SAGPGLWWNPAPYQP

hide sequence

RefSeq Acc Id:	XP_006228434 ⟸ XM_006228372
- Peptide Label:	isoform X24
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIK AEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLL PQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAMTRPTLPDPHLSHPQPSKCLEPPS HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK LKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQ KPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGA GTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNP SPQGSHSAIGLTGLNPSAGPGLWWNPAPYQP hide sequence

RefSeq Acc Id:	XP_006228433 ⟸ XM_006228371
- Peptide Label:	isoform X23
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKVG ILSGLHLTFWGPGPCLSPPQIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQL LQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPSK CLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLS FKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEK SFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLV TPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPAT TNSTNPSPQGSHSAIGLTGLNPSAGPGLWWNPAPYQP hide sequence

RefSeq Acc Id:	XP_017444178 ⟸ XM_017588689
- Peptide Label:	isoform X26
- UniProtKB:	A0A8I5ZSA9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKDI QQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQ LHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKCLEPPSHPEEPSDLEELEQFARTFKQRR IKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLP SPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIR VWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSA VGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNPSAGPGL WWNPAPYQP hide sequence

RefSeq Acc Id:	XP_017444177 ⟸ XM_017588688
- Peptide Label:	isoform X22
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIK AEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLL PQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQLHPGPRSCIPSTCPPYQAMTRPTLP DPHLSHPQPSKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQT TISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTS IETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSP GKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNS IPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNPSAGPGLWWNPAPYQP hide sequence

RefSeq Acc Id:

XP_017444168 ⟸ XM_017588679

- Peptide Label:

isoform X3

- Sequence:

show sequence

MSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKVGILSGLHLTFWGP
GPCLSPPQIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGLSALIPAQQQLLLQQAQ
AQLLAAAVQQSNAAAANAAAAAAAASTSSSTSSASSSTSQTPASSGGGDLPPSQPTSQPPGTPQ
LTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQG
ALLTSQPRAGLPTQLHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKCLEPPSHPEEPSDL
EELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKW
LNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL
LIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQA
SSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSA
IGLTGLNPSAGSTMVGLSSGLSPALMGNNPLATIQGACCLMSPHCHQSCPLLGLEAPSPLLPQP
CHPALPLTALLACSSPSVFGEGVRVLLLGSQWDRQEMGCSGRVHRGQGLPGLMYLQLSLSFSSP
ALASGGTLPLTSLDSSGNLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAV
AATISSKSPGLSSSSSSSSSSSTCSEVAAQTSGGPGGPEAGSKAE

hide sequence

RefSeq Acc Id:	XP_017444175 ⟸ XM_017588686
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6A150 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKDI QQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQ LHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKCLEPPSHPEEPSDLEELEQFARTFKQRR IKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLP SPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIR VWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSA VGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNPSAGSTM VGLSSGLSPALMGNNPLATIQGACCLMSPHCHQSCPLLGLEAPSPLLPQPCHPALPLTALLACS SPSVFGEGVRVLLLGSQWDRQEMGCSGRVHRGQGLPGLMYLQLSLSFSSPALASGGTLPLTSLD SSGNLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKSPGLSSS SSSSSSSSTCSEVAAQTSGGPGGPEAGSKAE hide sequence

RefSeq Acc Id:	XP_017444176 ⟸ XM_017588687
- Peptide Label:	isoform X19
- UniProtKB:	A0A0G2KAN4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIK AEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLL PQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPSKCLEPPSHPEEPSDLEELEQFAR TFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMS VDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHM EKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTV TTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNP SAGSTMVGLSSGLSPALMGNNPLATIQALASGGTLPLTSLDSSGNLVLGAAGAAPGSPSLVTSP LFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKSPGLSSSSSSSSSSSTCSEVAAQTSGGPGG PEAGSKAE hide sequence

RefSeq Acc Id:	XP_017444174 ⟸ XM_017588685
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6A150 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKIK AEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQLLQLQQLVLVPGHHLQPPAQFLL PQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQPSKCLEPPSHPEEPSDLEELEQFAR TFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMS VDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHM EKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTV TTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNP SAGSTMVGLSSGLSPALMGNNPLATIQGACCLMSPHCHQSCPLLGLEAPSPLLPQPCHPALPLT ALLACSSPSVFGEGVRVLLLGSQWDRQEMGCSGRVHRGQGLPGLMYLQLSLSFSSPALASGGTL PLTSLDSSGNLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKS PGLSSSSSSSSSSSTCSEVAAQTSGGPGGPEAGSKAE hide sequence

RefSeq Acc Id:	XP_017444171 ⟸ XM_017588682
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6A150 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKVG ILSGLHLTFWGPGPCLSPPQIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGDIQQL LQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQLHP GPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKCLEPPSHPEEPSDLEELEQFARTFKQRRIKL GFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPN QLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWF CNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGT LHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLTGLNPSAGSTMVGL SSGLSPALMGNNPLATIQGACCLMSPHCHQSCPLLGLEAPSPLLPQPCHPALPLTALLACSSPS VFGEGVRVLLLGSQWDRQEMGCSGRVHRGQGLPGLMYLQLSLSFSSPALASGGTLPLTSLDSSG NLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKSPGLSSSSSS SSSSSTCSEVAAQTSGGPGGPEAGSKAE hide sequence

RefSeq Acc Id:

XP_017444172 ⟸ XM_017588683

- Peptide Label:

isoform X8

- Sequence:

show sequence

MVHSSMGAPEIRMSKPLEAEKQSLDSPSEHTDTERNGPDINHQNPQNKASPFSVSPTGPSTKVG
ILSGLHLTFWGPGPCLSPPQIKAEDPSGDSAPAAPPPPQPAQPHLPQAQLMLTGSQLAGLSALI
PAQQQLLLQQAQAQLLAAAVQQSNAAAANAAAAAAAASTSSSTSSASSSTSQTPASSGGGDLPP
SQPTSQPPGTPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPT
PNLFQLPQQTQGALLTSQPRAGLPTQLHPGPRSCIPSTCPPYQAMTRPTLPDPHLSHPQPSKCL
EPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK
NMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSF
LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPTSYSPHLVTP
QGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGGGGGAAPPLNSIPSVTPPPPATTN
STNPSPQGSHSAIGLTGLNPSAGSTMVGLSSGLSPALMGNNPLATIQALASGGTLPLTSLDSSG
NLVLGAAGAAPGSPSLVTSPLFLNHTGLPLLSAPPGVGLVSAAAAAVAATISSKSPGLSSSSSS
SSSSSTCSEVAAQTSGGPGGPEAGSKAE

hide sequence

Ensembl Acc Id:

ENSRNOP00000075463 ⟸ ENSRNOT00000084569

Ensembl Acc Id:

ENSRNOP00000072745 ⟸ ENSRNOT00000087572

RefSeq Acc Id:	XP_038968969 ⟸ XM_039113041
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038969019 ⟸ XM_039113091
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038969057 ⟸ XM_039113129
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038968995 ⟸ XM_039113067
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038968890 ⟸ XM_039112962
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038969235 ⟸ XM_039113307
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_038969116 ⟸ XM_039113188
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I6A150 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038968978 ⟸ XM_039113050
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038968932 ⟸ XM_039113004
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038934006 ⟸ XM_039078078
- Peptide Label:	isoform X25
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000089154 ⟸ ENSRNOT00000103845

Ensembl Acc Id:

ENSRNOP00000084371 ⟸ ENSRNOT00000104344

Ensembl Acc Id:

ENSRNOP00000081328 ⟸ ENSRNOT00000118587

RefSeq Acc Id:	XP_063123043 ⟸ XM_063266973
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063123409 ⟸ XM_063267339
- Peptide Label:	isoform X21
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123115 ⟸ XM_063267045
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063123382 ⟸ XM_063267312
- Peptide Label:	isoform X20
- UniProtKB:	A0A8I6A6L7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123082 ⟸ XM_063267012
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063123594 ⟸ XM_063267524
- Peptide Label:	isoform X27
- UniProtKB:	A0A8I5ZSA9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123288 ⟸ XM_063267218
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063123253 ⟸ XM_063267183
- Peptide Label:	isoform X17
- UniProtKB:	A0A0G2K3R5 (UniProtKB/TrEMBL), A0A0G2KAN4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123199 ⟸ XM_063267129
- Peptide Label:	isoform X15

Ensembl Acc Id:

ENSRNOP00000107534 ⟸ ENSRNOT00000147093

Ensembl Acc Id:

ENSRNOP00000101660 ⟸ ENSRNOT00000137877

Protein Domains

Homeobox POU-specific

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2K3R5-F1-model_v2	AlphaFold	A0A0G2K3R5	1-479	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621690	AgrOrtholog
BioCyc Gene	G2FUF-60404	BioCyc
Ensembl Genes	ENSRNOG00000055650	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000084569.3	UniProtKB/TrEMBL
	ENSRNOT00000087572	ENTREZGENE
	ENSRNOT00000087572.3	UniProtKB/TrEMBL
	ENSRNOT00000103845	ENTREZGENE
	ENSRNOT00000103845.2	UniProtKB/TrEMBL
	ENSRNOT00000104344	ENTREZGENE
	ENSRNOT00000104344.2	UniProtKB/TrEMBL
	ENSRNOT00000118587	ENTREZGENE
	ENSRNOT00000118587.2	UniProtKB/TrEMBL
	ENSRNOT00000137877	ENTREZGENE
	ENSRNOT00000137877.1	UniProtKB/TrEMBL
	ENSRNOT00000147093	ENTREZGENE
	ENSRNOT00000147093.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.260.40	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
InterPro	Homeobox	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeodomain-like	UniProtKB/TrEMBL
	Lambda_DNA-bd	UniProtKB/TrEMBL
	POU	UniProtKB/TrEMBL
	POU2F1_C	UniProtKB/TrEMBL
	POU_domain_TF	UniProtKB/TrEMBL
	POU_specific	UniProtKB/TrEMBL
	TF_octamer	UniProtKB/TrEMBL
NCBI Gene	117058	ENTREZGENE
PANTHER	POU DOMAIN	UniProtKB/TrEMBL
	POU DOMAIN, CLASS 2, TRANSCRIPTION FACTOR 2	UniProtKB/TrEMBL
Pfam	Homeobox	UniProtKB/TrEMBL
	Pou	UniProtKB/TrEMBL
	POU2F1_C	UniProtKB/TrEMBL
PhenoGen	Pou2f2	PhenoGen
PRINTS	OCTAMER	UniProtKB/TrEMBL
	POUDOMAIN	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
	POU_1	UniProtKB/TrEMBL
	POU_2	UniProtKB/TrEMBL
	POU_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000055650	RatGTEx
SMART	HOX	UniProtKB/TrEMBL
	POU	UniProtKB/TrEMBL
Superfamily-SCOP	Homeodomain_like	UniProtKB/TrEMBL
	Lambda_like_DNA	UniProtKB/TrEMBL
UniProt	A0A0G2K3R5	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2KAN4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZSA9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A150	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A6L7	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LB17_RAT	UniProtKB/TrEMBL
	A0ABK0LNT5_RAT	UniProtKB/TrEMBL
	A6J940_RAT	UniProtKB/TrEMBL
	A6J941_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-09-24	Pou2f2	POU class 2 homeobox 2	Pou2f2	POU domain, class 2, transcription factor 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Pou2f2	POU domain, class 2, transcription factor 2			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Pou2f2	POU domain, class 2, transcription factor 2			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD