Hint3 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 28,854,860 - 28,864,723 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 28,854,844 - 28,867,125 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 27,035,936 - 27,045,799 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 27,035,905 - 27,047,721 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 26,787,103 - 26,796,951 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 32,786,909 - 32,796,757 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 26,987,684 - 26,997,532 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 29,413,425 - 29,423,288 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 29,413,365 - 29,423,347 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 30,852,923 - 30,864,803 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 27,719,396 - 27,729,255 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 25,712,849 - 25,722,713 (+) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 27,722,396 - 27,732,198 (+) | NCBI | | | | | Cytogenetic Map | 1 | p11 | NCBI | | | | |
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HINT3 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 6 | 125,956,770 - 125,980,244 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 125,956,733 - 125,980,244 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 6 | 126,277,916 - 126,301,390 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 126,319,629 - 126,341,265 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 126,319,628 - 126,341,265 | NCBI | | | | | Celera | 6 | 127,020,206 - 127,043,674 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q22.32 | NCBI | | | | | HuRef | 6 | 123,854,165 - 123,877,740 (+) | NCBI | | HuRef | | | CHM1_1 | 6 | 126,541,832 - 126,565,299 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 127,145,464 - 127,168,867 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Hint3 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 10 | 30,479,191 - 30,499,526 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 30,484,137 - 30,505,628 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 10 | 30,603,195 - 30,623,530 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 30,608,141 - 30,629,632 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 10 | 30,328,013 - 30,338,172 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 30,297,623 - 30,307,782 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 31,534,282 - 31,544,441 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | A4 | NCBI | | | | | cM Map | 10 | 17.1 | NCBI | | | | |
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Hint3 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955436 | 7,254,675 - 7,266,111 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955436 | 7,254,572 - 7,265,936 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HINT3 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 5 | 145,946,826 - 145,970,499 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 143,852,094 - 143,875,773 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 123,741,237 - 123,764,600 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 127,859,194 - 127,882,535 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 127,859,194 - 127,882,535 (+) | Ensembl | | | panPan2 | panpan1.1 |
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HINT3 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 1 | 64,831,833 - 64,850,594 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 65,636,112 - 65,660,357 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 65,036,946 - 65,061,118 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 1 | 65,036,893 - 65,127,836 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 1 | 64,964,622 - 64,988,869 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 64,752,433 - 64,777,544 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 65,403,324 - 65,427,591 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Hint3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024404946 | 114,902,766 - 114,914,010 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936639 | 3,505,101 - 3,516,568 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936639 | 3,505,107 - 3,516,410 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HINT3 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 1 | 37,008,504 - 37,023,935 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 37,008,063 - 37,024,203 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 40,782,700 - 40,795,796 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
HINT3 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 13 | 47,741,551 - 47,764,977 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 47,740,440 - 47,764,916 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666040 | 20,052,713 - 20,081,126 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hint3 (Rattus rattus - black rat) |
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