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Gene: Myo16 (myosin XVI) Rattus norvegicus

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Symbol:

Myo16

Name:

myosin XVI

RGD ID:

621561

Description:

Enables actin filament binding activity and protein phosphatase binding activity. Involved in cerebellum development; negative regulation of G1/S transition of mitotic cell cycle; and negative regulation of cell population proliferation. Located in nucleoplasm; perinuclear region of cytoplasm; and plasma membrane. Part of myosin complex. Orthologous to human MYO16 (myosin XVI); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

Loc192253; myosin heavy chain Myr 8; myosin-XVI; Myr8; neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 3; unconventional myosin-16; unconventional myosin-XVI

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MYO16 (myosin XVI)	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Myo16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MYO16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MYO16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Myo16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MYO16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MYO16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Myo16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Myo16 (myosin XVI)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	MYO16 (myosin XVI)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Myo16 (myosin XVI)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myo16 (myosin XVI)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	myo16 (myosin XVI)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	hum-4	Alliance	DIOPT (Ensembl Compara\|OrthoFinder)
Xenopus tropicalis (tropical clawed frog):	myo16	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	myo16	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	85,586,428 - 86,066,537 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	85,586,429 - 85,973,879 (-)	Ensembl				GRCr8
mRatBN7.2	16	78,884,405 - 79,364,445 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	78,884,406 - 79,248,388 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	84,164,793 - 84,528,736 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	87,617,465 - 87,981,387 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	82,861,492 - 83,225,010 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	84,575,149 - 85,177,834 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	84,575,150 - 84,939,323 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	84,230,049 - 84,387,681 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	84,026,826 - 84,196,088 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	83,812,189 - 84,174,521 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	76,676,597 - 77,035,726 (-)	NCBI		Celera
RGSC_v3.1	16	83,798,041 - 84,160,561 (-)	NCBI
Cytogenetic Map	16	q12.5	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

prostate cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (EXP)

3,7-dihydropurine-6-thione (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

ammonium chloride (EXP)

atrazine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

butyric acid (ISO)

cadmium dichloride (ISO)

clotrimazole (EXP)

cobalt dichloride (EXP)

coumarin (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

endosulfan (EXP)

fulvestrant (ISO)

genistein (ISO)

glyphosate (EXP)

lead(0) (ISO)

lipopolysaccharide (ISO)

mercaptopurine (EXP)

methapyrilene (ISO)

methimazole (EXP)

methoxychlor (EXP)

N-Nitrosopyrrolidine (ISO)

O-methyleugenol (ISO)

okadaic acid (ISO)

paracetamol (ISO)

progesterone (ISO)

propiconazole (EXP)

purine-6-thiol (EXP)

S-(1,2-dichlorovinyl)-L-cysteine (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cerebellum development (IEP)

negative regulation of cell population proliferation (IDA)

negative regulation of G1/S transition of mitotic cell cycle (IBA,IDA)

neuron projection morphogenesis (IBA,IEA,ISO)

phosphatidylinositol 3-kinase/protein kinase B signal transduction (IBA,IEA,ISO)

Cellular Component

cytoplasm (IDA,IEA)

myosin complex (IBA,IDA,IEA)

nucleoplasm (IBA,IDA,ISO)

perinuclear region of cytoplasm (IBA,IDA,ISO)

plasma membrane (IDA)

Molecular Function

actin binding (IDA,IEA)

actin filament binding (IBA,IDA)

ATP binding (IEA)

cytoskeletal motor activity (IEA)

nucleotide binding (IEA)

protein binding (IPI,ISO)

protein phosphatase binding (IBA,IPI)

protein-containing complex binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Myosin16b: The COOH-tail region directs localization to the nucleus and overexpression delays S-phase progression.	Cameron RS, etal., Cell Motil Cytoskeleton. 2007 Jan;64(1):19-48.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
4.	Myr 8, a novel unconventional myosin expressed during brain development associates with the protein phosphatase catalytic subunits 1alpha and 1gamma1.	Patel KG, etal., J Neurosci 2001 Oct 15;21(20):7954-68.
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:16025302	PMID:21946561	PMID:23596177

Genomics

Comparative Map Data

Myo16
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	85,586,428 - 86,066,537 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	85,586,429 - 85,973,879 (-)	Ensembl				GRCr8
mRatBN7.2	16	78,884,405 - 79,364,445 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	78,884,406 - 79,248,388 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	16	84,164,793 - 84,528,736 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	87,617,465 - 87,981,387 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	82,861,492 - 83,225,010 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	84,575,149 - 85,177,834 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	84,575,150 - 84,939,323 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	84,230,049 - 84,387,681 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Rnor_5.0	16	84,026,826 - 84,196,088 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	83,812,189 - 84,174,521 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	76,676,597 - 77,035,726 (-)	NCBI		Celera
RGSC_v3.1	16	83,798,041 - 84,160,561 (-)	NCBI
Cytogenetic Map	16	q12.5	NCBI

MYO16
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	13	108,495,716 - 109,208,005 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	13	108,596,152 - 109,208,005 (+)	Ensembl			hg38	GRCh38
GRCh37	13	109,248,253 - 109,860,353 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	13	108,046,501 - 108,658,356 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	13	90,093,241 - 90,704,849 (+)	NCBI		Celera
Cytogenetic Map	13	q33.3	NCBI
HuRef	13	89,841,420 - 90,459,347 (+)	NCBI		HuRef
CHM1_1	13	109,217,125 - 109,828,656 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	13	107,723,546 - 108,435,400 (+)	NCBI		T2T-CHM13v2.0

Myo16
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	10,203,911 - 10,684,742 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	10,203,911 - 10,684,742 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	8	10,153,911 - 10,634,742 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	10,153,911 - 10,634,742 (+)	Ensembl			mm10	GRCm38
MGSCv37	8	10,153,923 - 10,633,950 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	8	10,153,883 - 10,634,716 (+)	NCBI		MGSCv36	mm8
Celera	8	10,328,629 - 10,808,123 (+)	NCBI		Celera
Cytogenetic Map	8	A1.1	NCBI
cM Map	8	4.77	NCBI

MYO16
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	14	110,112,484 - 110,698,180 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	13	108,792,576 - 109,377,691 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	13	89,754,451 - 90,338,658 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	13	108,927,287 - 109,474,930 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	13	108,922,993 - 109,473,752 (+)	Ensembl			panPan2	panpan1.1

MYO16
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	22	57,313,714 - 57,794,415 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	22	57,198,283 - 57,648,949 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	22	57,085,190 - 57,565,676 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	22	57,839,484 - 58,412,897 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	22	57,435,509 - 57,915,297 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	22	57,308,927 - 57,905,949 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	22	57,461,062 - 57,942,253 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Myo16
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	192,377,582 - 192,794,647 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936472	3,212,773 - 3,574,114 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936472	3,157,508 - 3,548,164 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MYO16
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	11	75,739,783 - 76,271,958 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	11	83,414,995 - 83,584,583 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MYO16
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	3	86,850,362 - 87,550,840 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666046	43,511,471 - 44,211,261 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Myo16
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624793	2,956,643 - 3,399,949 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Myo16
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	73,227,563 - 73,610,448 (-)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	657
Count of miRNA genes:	268
Interacting mature miRNAs:	341
Transcripts:	ENSRNOT00000022742
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2300163	Bmd64	Bone mineral density QTL 64	5.3	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	16	44455123	89455123	Rat
7411648	Foco22	Food consumption QTL 22	15	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	16	59428714	91442908	Rat
2293690	Bss45	Bone structure and strength QTL 45	5.13	0.0001	lumbar vertebra morphology trait (VT:0010494)	lumbar vertebra cortical cross-sectional area (CMO:0001690)	16	44455123	89455123	Rat
1578768	Stresp22	Stress response QTL 22	2.8		thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	16	41992064	86992064	Rat
8694364	Abfw7	Abdominal fat weight QTL 7	12.22	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	16	59428714	91442908	Rat
8694429	Bw164	Body weight QTL 164	5	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	16	59428714	91442908	Rat
7205510	Activ5	Activity QTL 5	3.78	0.00028	locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	16	49099196	91442908	Rat

Markers in Region

RH138613

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	78,965,558 - 78,965,743 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	84,656,213 - 84,656,397	NCBI	Rnor6.0
Rnor_5.0	16	84,107,935 - 84,108,119	UniSTS	Rnor5.0
RGSC_v3.4	16	83,893,463 - 83,893,647	UniSTS	RGSC3.4
Celera	16	76,757,844 - 76,758,028	UniSTS
RH 3.4 Map	16	760.5	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

BF388471

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	16	78,884,581 - 78,884,794 (+)	MAPPER	mRatBN7.2
Rnor_6.0	16	84,575,326 - 84,575,538	NCBI	Rnor6.0
Rnor_5.0	16	84,027,002 - 84,027,214	UniSTS	Rnor5.0
RGSC_v3.4	16	83,812,365 - 83,812,577	UniSTS	RGSC3.4
Celera	16	76,676,773 - 76,676,985	UniSTS
RH 3.4 Map	16	762.4	UniSTS
Cytogenetic Map	16	q12.5	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
13	11	62	159	49	49	18	28	18	6	236	122	10	138	76	90	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_138893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008771384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039094188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF209114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY004215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022742 ⟹ ENSRNOP00000022741

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	85,586,429 - 85,973,879 (-)	Ensembl
mRatBN7.2 Ensembl	16	78,884,406 - 79,248,388 (-)	Ensembl
Rnor_6.0 Ensembl	16	84,575,150 - 84,939,323 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000076341

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	85,586,429 - 85,950,368 (-)	Ensembl
mRatBN7.2 Ensembl	16	78,884,406 - 79,248,388 (-)	Ensembl
Rnor_6.0 Ensembl	16	84,648,540 - 84,939,323 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099053 ⟹ ENSRNOP00000096592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	85,586,429 - 85,950,368 (-)	Ensembl
mRatBN7.2 Ensembl	16	78,884,406 - 79,248,388 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000157694 ⟹ ENSRNOP00000104703

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	85,586,429 - 85,973,879 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167515 ⟹ ENSRNOP00000103694

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	16	85,586,429 - 85,973,879 (-)	Ensembl

RefSeq Acc Id:

NM_138893 ⟹ NP_620248

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	85,586,429 - 85,950,368 (-)	NCBI
mRatBN7.2	16	78,884,406 - 79,248,388 (-)	NCBI
Rnor_6.0	16	84,575,150 - 84,939,323 (-)	NCBI
Rnor_5.0	16	84,026,826 - 84,196,088 (-)	NCBI
Rnor_5.0	16	84,230,049 - 84,387,681 (-)	NCBI
RGSC_v3.4	16	83,812,189 - 84,174,521 (-)	RGD
Celera	16	76,676,597 - 77,035,726 (-)	RGD

Sequence:

show sequence

GCACGAGACCAGCTATGTAATGTTTTTCGATCTCATGAGATGGAAATTGACCAGTGCTTGCTGG
AGTCCCTCCCCCTGGGCCAGCGGCAGCGTCTGGTGAGGCGCATGCGCTGTGAGCAAATCAAAGC
CTACTATGAGCGAGAGAAAGTGTTCCAGAAGCAGGAAGGGCTCCTGAAGAGAATTAAGCCTGGG
AAAAGCCAGAAGGTCCGCTTCGGCCTGGCTGACATGATTCAGGATGCCATTATCCACCACCACG
ACAAAGAGGTGCTTCAACTCTTGAAGGAGGGGGCCGACCCACACACTCTTGTTTCCTCAGGAGG
GTCTTTACTTCACCTGTGTGCTCGCTATGACAATGTCTTCATCGCAGAAGTCCTCATTGACAGG
GGTGTCAATGTCAACCACCAGGATGAGGACTTTTGGGCCCCAATGCACATTGCCTGTGCCTGTG
ACAACCCTGACATTGTCCTGTTGCTCATATTAGCTGGAGCCAACGTCCTTCTGCAAGATGTGAA
TGGAAATATCCCGTTAGATTACGCTGTCGAAGGGACAGAATCTAGTGCTATCCTGCTGGCCTAT
TTGGATGAAAACGGGGTGGACCTGAACTCTCTGCGCCAGATAAAGCTGCAGCGGCCCCTGAGTA
TGCTGACAGACGTCAGGCACTTCCTGTCTTCAGGTGGAGATGTCAACGAGAAAAATGATGACGG
GGTGACCCTGCTGCACATGGCGTGTGCCAGTGGCTACAAAGAGGTGGTGCTTCTCCTCTTAGAA
CATGGCGGAGACCTCAATGGGATGGATGATGGGTACTGGACACCCCTGCATTTAGCAGCCAAGT
ATGGCCAGACAACCCTGGTGAAGCTCCTTCTGGCACATCAGGCAAACCCCCACCTTGTGAACTG
CAATGGGGAGAAACCATCAGACATCGCTGCCTCTGAGTCTATTGAGGAGATGCTGCTGAAAGCA
GAGATTGCCTGGGAGGAGAGAATGAAAGAGTCCCCGTCTGTTCCTAGCTTAGCACAGGAGGAGC
TGTATGAGGAGATCCTTCACGACCTCCCGGAGCTTTCCAGTAAGCTCAGTCCTCTGGTGCTACC
AATTGCCAAGCAGGACAGTTTGCTGGAAAAAGACATTATGTTCAAAGACACAACAAAAGGTCTG
TGCAACCAGGAATCCCAGGATGGCCCTCCTGAGACCAGCATGGTGAGCAGCTCCAGCAAGCCAG
AACAGGTCCAGCTCACGCCTCCAGCTCCCAGTGATGACCTGGCCACACTCAGCGAGCTGAATGA
CAGCAGCCTGCTCTATGAAATCCAGAAGCGCTTCGGGAATGACCAGATACACACCTTCATCGGA
GACATCTTTTTGCTCGTTAACCCTTTCAAAGAACTCCCAATTTACTCCACTGTGGTGTCCCAAA
TGTACCTGAGCCCCACAGGCCAGCGCAGCCCCTCACTGCCACCCCACCTCTTCTCCTGTGCAGA
GAGAGCCTTCCACAGGCTGTTCCAGGAGCGAAGGCCACAGAACATCATCCTCAGTGGAGAAAGA
GGTTCGGGGAAGACCCAGGCCAGCAAGCAAATCATGAAGCACCTTACCAGCAGGGCCAGCTCCA
GCTGTACCATGTTTGACTCCAGATTCAAGCATGCCATATGCATCTTGGAGGCCTTCGGACATGC
CAAGACCACACTCAACAACGTATCCAGTTGCCTCATACAGTACTGGGAACTGCAGTTCTGTCAG
AGGAGAAAACACGTAACTGGAGCCAGAATTTCCACTTACATGCTGGAGAAGCCCAGGCTTGTGG
CTCAGCCTCCTGGCCAGGGCAGCTTCCTGATTTTCTCCTGGTTGATGGACGGCTTATCCGCAGA
AGAAAAATGTGGACTTCACCTTAGTAACTTCTGTGCACACCGGTACGTGAGCCAAGGCATGCGG
GAAGATGTGTCCACAGCAGAGCGTTCTCTGAACAAGGAGAGACTTGCAGATCTGAAACATGCTC
TGAATGTAATTGGCTTCAGCGCCTTGGAGGTGGAGAACCTGTTCGCTATCCTGTCGGCGATCTT
ACACATCGGAGACATCCAGTTCACCGCGCTGACGGAAGCTGACTCGGCCTTTGTCTCTGACCTC
CAGCTTCTGGAACAAGTGGCAGACATGTTGCAAGTGTCGACAGATGAGCTGGCATCCGCCCTAA
CAACTGATATTCAGTATTTTAAAGGAGATGTGATAATACGTCGACACACCACCCAGATCGCTGC
ATTTTACCGAGACCTCCTGGCCAAGTCGCTGTACAGCCGATTGTTTGGTTTTCTGATAAACACT
GTGAATTGCTGCCTCCAGAGTCAAGATGAATATAAAAGCCTACAGACATTGGATATTGGAATAC
TGGACATTTTTGGTTTTGAGGAATTTCAAAAGAATGAATTTGAACAACTCTGTGTCAACCTGAC
CAACGAAAAAATGCACCACTATATCCAAGAAGTGCTTTTCCTACAAGAGCAAACAGAGTGTGTA
CAAGAGGGAGTTGCCATGGAAACTGCCTGTTCTCCTGGTAACCAGGCTGGAGTTTTGGATTTCT
TCTTCCAGAAACCATCAGGATTCTTCTCCCTATTGGACGAGGAGAGTCAAGCGATTTGGTCAGT
GGAGCCAAACCTTCCCAGGAAGCTGCAGGGTCTCCTGGAATCATCAAACACAAATGCAGTCTAT
TCCCCCATGAAGGACGGCAACGGGAATGTTGCTTTCAAAGGTCAAGGCGCAGCCTTCACTGTCA
TGCACTACGCAGGAAGGGTAACGTATGAAATCAGAGGAGCGGTGGAAAGGAATAAAGACTCTCT
TTCACAGAACCTCCTATTTGTAATGAAAACAAGTGAAAATGTCGTGATCAGTCACCTGTTCCAG
TCAAAACTCTCACCGACGGGATCGCTCATATCTTCCTACCCATCCTTTAAATTTGGAGGACACA
AATCCAGCCTGCTCAGTAAGAGAATTGCCTCTTCAATGGTTGGAGTGAACAAGAATTACCTAGA
ACTTAGCAAGTTATTAAAAAAGAAGGGAACTTGCACATTCCTACAAAGACTGGAACGCGGAGAC
CCCGCCACTACTGCGTCGCAACTCACGAAATCTCTGGCAGACATCACTGCAAAGCTGCAGAAGG
GCAGTCCGCACTTCATCCTTTGCGTCAAGCCTAATACCTCACAGCTACCTGGTGTGTTCGATCA
CTTCTACGTGTCTGCCCAACTGCAGTACCTCGGTGTCCTAGGGCTGGTGAGGCTGTTCCGCTAT
GGGTACCCAGTGCGCCCTTCCTTCGAGGACTTCCTGTCCAGATATGAGCCACTGGCTTCTGTCC
TCCTGGGTGAGAAGAAGGGTCAGCCCGCCGAGGAGAGATGTCGGCTGGTTCTCCAGCGGTGTAA
ACTACAAGGTTGGCAGATGGGCGTCCACAAAGTGTTCCTGAAGTACTGGCAGGTGGACCAGCTC
GGTGACCTGTGGCTCCAGATGCAAAGGAAGATTGTAACTTGTCAGAAAGTTATAAGAGGGTTTC
TAGCCCGCCAGCACTTACTTCAGAGAATGAGCATCAAGCAGCAAGAGGTTACATCCATCAAGAG
CTTCTTACAGAGCACAGAGGACATGGCACTGAAAACCTATGATGCCCTGGTTATTCAGAACGCT
TCTGACATTGCCCGGGAACATGATAGGCTCCGGAAGGAGGTCCATGCTGCCTACCACAGGAACA
GACAAGAGGAAGGAACCAAGAGAGCTGAAGACCAGGGAGGATGCCGGCATGCCCATTCCAACTC
GGTTCCCGTGCCCATGGCAGTGGACAGCCTTGCCCAGGCTCTCGCCGGCCCGTCCAGTCGGTCC
CCATCACTGCACTCTGTGTTCAGCATGGATGACAGCACTGGCCTCCCGTCACCACGGAAACAGC
CTCCACCCAAGCCAAAGAGGGACCCCAACACCCGGCTGAGTGCCTCCTATGAGGCTGTGAGCGC
CTGCCTTTCGGCCACCAAGGATGCAGCCAGCGAAGCTCTGACACGGCCCAGACCCCACAGTGAT
GATTACAGTACCATGAAGAAAATTCCCCCTCGGAAGCCAAAGAGAAGTCCCCACACGAAGCTCA
GTGGCTCTTATGAGGAGATCTGGGGACCGAGGCCTTCTGGTACAATGGGCCAGGTGGGCAAACA
TCATGCCCCAGGGACACTGGGTGTGCAGTGGGCCAGTCCTGACTCCATGCCACAGTGCACACCC
CAGCTGCCTCTGCACCTGCCATTGCCACAGGGTGACTATGACGATGACGGCGAGCCTGTGTATA
TCGAGATGGTAGGGAACGCAGCCAGGGCAGGCGGATCTGAGACTGACAGCCCTGACCAGGGCGA
GTCTGTGTATGAGGAGATGAAGTACGTCTTGCCTGAGGAGGGCTGTGGTCCAGGGATGCTCACC
TTCCTGCCTGCCTCGCCACCTCTGTTTTTAGAGACCCGAAAAGCCATCATCTTGGAGGCTGGAG
AGGGGAGCTGCCAGCCCCTGAAGGACACGTGTGACATCCCCCCACCCTTCCCGAATCTGCTTCC
CCATAGGCCGCCGCTCCTGGTCTTTCCTCCCACCCCAGTGACCTGCTCCCCAGCTTCTGATGAG
TCTCCACTGACACCCTTGGAGGTAAAGAAACTGCCAGTCTTAGAGACCAACCTCAAGTACCCAG
TGCAGTCCGAAGGCTCCAGTCCCTTGTCACCACAGTACTCAAAAGCACAGAAGGGAGAAAATGA
CCAGCTGACGTCTCCTGGCTTTCCTGTGTTTAATGGGCCCAGCCGAATCTCACCACCTGCCACA
CCACCGCCACCTCCAGGGCCACCTCCTGCACCCTGTGGGCCACCTTCTGCACCCTGTGGGCCAC
CTCCTGCACCGTGTGGGCCACCTCCTGTACCCTGTGGGCCACCTCCTGCACCCTGTGGGCCACC
TCCTGCACCCTGTGGGGCAGCCCCTGCACCCTGCAGGCCACCCACACACTTTGCCTTTCCACCA
GATTCTGTCTTGGTCACTGCAGCTAAAGCACTGACTAACTCTGACCTGCCCAGAACACAGCCAA
AGCCCAGTTCAGCCCCAGTACTGGGTCCCTGCAGCCCCTTTGTCAAGGCTCCATATTCACCCGG
AAGGACAGCCAGAGCAGACCTCAGGAAGGCCTCATCCACCTTCTCCCCACCGAGCCCTTACAGC
CCACCCAACAGCAGGCCGCTGTCCAGCCCTCTGGATGAGCTGGCCAGCCTCTTCAACTCGGGAA
GGAGTGTGCTACGCAGGTCTGCAGTGGGACGAAGGATCAGGGAGGCTGAAGGTTTTGAAACTAA
CATGAACCTGAGTAGCCGGGATGAACCCAGCTCATCAGAAATGGCTTCCGAGACTCAAGACAGA
AACGCAAACAACCACGGGACTCAGCTCTCCAGCTCCCTGTCCAGTGTCGTCGCGGCTGAAAATG
GAAATCCTGTCACCAACGGTTTAGCTGAGGACGATGGGTGCTCAAGGCTGTGTCTGAGTGGCAT
GGGGACTTCATCATTTCAGAGACATCGGGAGAGCCACACCACCCAGGTTATCCATCAGCTGAGG
CTCTCCGAGAATGAAAGCGTAGCTCTTCAGGAGCTGCTGGACTGGAGGAGGAAGCTCTGTGAGT
CCAGAGAAGGCTGGCAGGAAGCCATGCAGCACCCAGAGCCCCGCGCACCTCCACCGCCACCCTG
CAAGAAGCCGACACTCCTAAAGAAGCCGGAGGGGGGCTCCTGCACTAGGCTGTCTTCCCAACTC
TGGGACAGTAGTATCTGATACAGCCTGGACTGTGAGCACCTGTCAGAGCTGTCTAGTGACTTCG
GGCTGCTTCTGCAGGAGGCTGCCTTCGGATGCCTGAGGTCTCCTCTCCAGGCATCTCCACAAAA
GCACAGGACACTAATGATGACTACCCAGGACCTCCCGCGTGTGTGAGGGTCTGCGTGTGCTCAC
TGGTTCCTTCTCCATTTCTTGATAGCACACTAAATCTTAGGGCCACCCTGCTTCCAGATAGCCA
GAGGCAAGGAGGCATGTGGCTGAGGTCAGAGGTCAGAGCAGTGGGGGGAGGTCCTCCAGGCAGC
TGTTTCTAGTACACCCCACAGTGGCCACGACCCAACCGGTGGCTGTCATATGGTGCAGCACATA
GGATGTGTGTTTCGTTTCTTTGTAGTTGTCTGTCATTAGAATTACAAACCCAACGATGTTTTAC
ATGTTTATTACCGTATTTTATAACGTTATGCAACTGGCGTGTTCCCTTTCATCAAAATACAGAT
TTAAAAAAAAAAACATTTCTAGGGTTTTTTTTTTTTTAATTCTACGTGCTTATTTTTAACCCAA
AGCCCCCAAAGGCGTGGGAACTGTGCGTTGCCTTGGCTTTAACAGATGCCTACAGCAATGCTAG
AGTTTATGTGCCCTGTCCCTCTACTCTTCCCTGCACCCAGCATCTCCCTTGGGTACATGTGGCT
TCAGCATTCACTGGTTAAGCTTCGTTCCCACCCAACCCCTCAGTTCGGTGTAGATGACAGGATG
TTTACGGTTCAAAACATATGGCTTCAAGTTCCTAGCTGATGATACAGGACTTTCAACAGGACTG
ACAAGCAGGCTGAGTCTCGTGGGACAGAGCAGTGTGCTGCCCTCCCTAGGAACACTGCATGACT
CCCTTGCTGTATGCCCGACCGGCTGTCATGCGTGTGATGGCCTTGCTTCTCCATGTCTTTCTGC
CTACTGTCCGTGAGTTCTGAGCGGTGGCTCTACCAGCCATCTGCCACCTCCTCCCACCACTTGG
ACCTGTTCACTCATTTCCACCATTGCAGAGCTTCTGTGCCAATAAAAGGGTGCAACTGT

hide sequence

RefSeq Acc Id:

XM_008771384 ⟹ XP_008769606

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	85,586,428 - 85,974,200 (-)	NCBI
mRatBN7.2	16	78,884,405 - 79,272,216 (-)	NCBI
Rnor_6.0	16	84,575,149 - 84,963,529 (-)	NCBI

Sequence:

show sequence

AAATATGGTATTTATCTCCATTGAAATAGAGTCTGGGAGACCATGTGTTGCCTTCCGATTGCAA
CCCAGGCAAACTTTATTCTCTGGCTTAGGTTGTGCAGTTTAATTCATTGCAATTTGCAGAGGTA
GCAGAATCCTAAATTTTAAAGCTGTGCAAATCAACACATTTCTCTGGGTAATTTAAATTTTGCA
TTCTGCATAGATAACCAAAAGGATCCCTTGCGAGAATGCTTCCTGGCTAGAGGCAGATCAAAGC
ATCCTCATCCTAAGAGGGGGCTATTTTCAGCTCCTGCTGTCCATTTCCAATCCACACAGCAACT
GGTGGCAACTAAATATAACGAATGAGCTTGGCCAAGGGCTAAGAATTCAGTCCTACGGAGCAGC
GCGCCGGGAGCACGGGCGAGCTTCTGGATGCCTTGTGCAGCATCTCCCTCCTGCCCACTCATCA
GTGTAGTCTTCTGCATTTTGAAAGCTATTGAGAAGCCATTAGCAGGCAGGACCAGGAGGGAGAG
CCGCACTGCAGCACACCTCCACACTAGTGGCAGGCTGTAGCTGCACACACGTGAGCAACAATTA
GAGCGACCCTTCCCAGGACTGTGGCGCTGGAATGTGTCAATCAAGGGCGCCCGGATAAGCACGT
GCAGCAGCAGCAGCAGCGGCAGCGGTGGCTCAGACCCACCCCGGGGGCTGCTCTAAACTCCAGC
TGCTGAATGAAAATGAGTTGGTACACTCTGCAAGATCATGAAGGGGAGCCTCTGTTCAGTAATG
CATTCTGAGGTACACCGTTACCTGAGCAGGGACCCTGAATTATGCATTTCCTGGAGACAACAGT
CATAGCTGAAGAGAATGCTGGGACCCACTGCAAGATCCAAGCCTGAGAAGGGACAATGTCTCAG
TATCATTTTATCAAGTGCTGTTGCTACCAGCTATGTAATGTTTTTCGATCTCATGAGATGGAAA
TTGACCAGTGCTTGCTGGAGTCCCTCCCCCTGGGCCAGCGGCAGCGTCTGGTGAGGCGCATGCG
CTGTGAGCAAATCAAAGCCTACTATGAGCGAGAGAAAGTGTTCCAGAAGCAGGAAGGGCTCCTG
AAGAGAATTAAGCCTGGGAAAAGCCAGAAGGTCCGCTTCGGCCTGGCTGACATGATTCAGGATG
CCATTATCCACCACCACGACAAAGAGGTGCTTCAACTCTTGAAGGAGGGGGCCGACCCACACAC
TCTTGTTTCCTCAGGAGGGTCTTTACTTCACCTGTGTGCTCGCTATGACAATGTCTTCATCGCA
GAAGTCCTCATTGACAGGGGTGTCAATGTCAACCACCAGGATGAGGACTTTTGGGCCCCAATGC
ACATTGCCTGTGCCTGTGACAACCCTGACATTGTCCTGTTGCTCATATTAGCTGGAGCCAACGT
CCTTCTGCAAGATGTGAATGGAAATATCCCGTTAGATTACGCTGTCGAAGGGACAGAATCTAGT
GCTATCCTGCTGGCCTATTTGGATGAAAACGGGGTGGACCTGAACTCTCTGCGCCAGATAAAGC
TGCAGCGGCCCCTGAGTATGCTGACAGACGTCAGGCACTTCCTGTCTTCAGGTGGAGATGTCAA
CGAGAAAAATGATGACGGGGTGACCCTGCTGCACATGGCGTGTGCCAGTGGCTACAAAGAGGTG
GTGCTGCTCCTCTTAGAACATGGCGGAGACCTCAATGGGATGGATGATGGGTACTGGACACCCC
TGCATTTAGCAGCCAAGTATGGCCAGACAACCCTGGTGAAGCTCCTTCTGGCACATCAGGCAAA
CCCCCACCTTGTGAACTGCAATGGGGAGAAACCATCAGACATCGCTGCCTCTGAGTCTATTGAG
GAGATGCTGCTGAAAGCAGAGATTGCCTGGGAGGAGAGAATGAAAGAGTCCCCGTCTGTTCCTA
GCTTAGCACAGGAGGAGCTGTATGAGGAGATCCTTCACGACCTCCCGGAGCTTTCCAGTAAGCT
CAGTCCTCTGGTGCTACCAATTGCCAAGCAGGACAGTTTGCTGGAAAAAGACATTATGTTCAAA
GACACAACAAAAGGTCTGTGCAACCAGGAATCCCAGGATGGCCCTCCTGAGACCAGCATGGTGA
GCAGCTCCAGCAAGCCAGAACAGGTCCAGCTCACGCCTCCAGCTCCCAGTGATGACCTGGCCAC
ACTCAGCGAGCTGAATGACAGCAGCCTGCTCTATGAAATCCAGAAGCGCTTCGGGAATGACCAG
ATACACACCTTCATCGGAGACATCTTTTTGCTCGTTAACCCTTTCAAAGAACTCCCAATTTACT
CCACTGTGGTGTCCCAAATGTACCTGAGCCCCACAGGCCAGCGCAGCCCCTCACTGCCACCCCA
CCTCTTCTCCTGTGCAGAGAGAGCCTTCCACAGGCTGTTCCAGGAGCGAAGGCCACAGAACATC
ATCCTCAGTGGAGAAAGAGGTTCGGGGAAGACCCAGGCCAGCAAGCAAATCATGAAGCACCTTA
CCAGCAGGGCCAGCTCCAGCTGTACCATGTTTGACTCCAGATTCAAGCATGCCATATGCATCTT
GGAGGCCTTCGGACATGCCAAGACCACACTCAACAACGTATCCAGTTGCCTCATACAGTACTGG
GAACTGCAGTTCTGTCAGAGGAGAAAACACGTAACTGGAGCCAGAATTTCCACTTACATGCTGG
AGAAGCCCAGGCTTGTGGCTCAGCCTCCTGGCCAGGGCAGCTTCCTGATTTTCTCCTGGTTGAT
GGACGGCTTATCCGCAGAAGAAAAATGTGGACTTCACCTTAGTAACTTCTGTGCACACCGGTAC
GTGAGCCAAGGCATGCGGGAAGATGTGTCCACAGCAGAGCGTTCTCTGAACAAGGAGAGACTTG
CAGATCTGAAACATGCTCTGAATGTAATTGGCTTCAGCGCCTTGGAGGTGGAGAACCTGTTCGC
TATCCTGTCGGCGATCTTACACATCGGAGACATCCAGTTCACCGCGCTGACGGAAGCTGACTCG
GCCTTTGTCTCTGACCTCCAGCTTCTGGAACAAGTGGCAGACATGTTGCAAGTGTCGACAGATG
AGCTGGCATCCGCCCTAACAACTGATATTCAGTATTTTAAAGGAGATGTGATAATACGTCGACA
CACCACCCAGATCGCTGCATTTTACCGAGACCTCCTGGCCAAGTCGCTGTACAGCCGATTGTTT
GGTTTTCTGATAAACACTGTGAATTGCTGCCTCCAGAGTCAAGATGAATATAAAAGCCTACAGA
CATTGGATATTGGAATACTGGACATTTTTGGTTTTGAGGAATTTCAAAAGAATGAATTTGAACA
ACTCTGTGTCAACCTGACCAACGAAAAAATGCACCACTATATCCAAGAAGTGCTTTTCCTACAA
GAGCAAACAGAGTGTGTACAAGAGGGAGTTGCCATGGAAACTGCCTGTTCTCCTGGTAACCAGG
CTGGAGTTTTGGATTTCTTCTTCCAGAAACCATCAGGATTCTTCTCCCTATTGGACGAGGAGAG
TCAAGCGATTTGGTCAGTGGAGCCAAACCTTCCCAGGAAGCTGCAGGGTCTCCTGGAATCATCA
AACACAAATGCAGTCTATTCCCCCATGAAGGACGGCAACGGGAATGTTGCTTTCAAAGGTCAAG
GCGCAGCCTTCACTGTCATGCACTACGCAGGAAGGGTAACGTATGAAATCAGAGGAGCGGTGGA
AAGGAATAAAGACTCTCTTTCACAGAACCTCCTATTTGTAATGAAAACAAGTGAAAATGTCGTG
ATCAGTCACCTGTTCCAGTCAAAACTCTCACCGACGGGATCGCTCATATCTTCCTACCCATCCT
TTAAATTTGGAGGACACAAATCCAGCCTGCTCAGTAAGAGAATTGCCTCTTCAATGGTTGGAGT
GAACAAGAATTACCTAGAACTTAGCAAGTTATTAAAAAAGAAGGGAACTTGCACATTCCTACAA
AGACTGGAACGCGGAGACCCCGCCACTACTGCGTCGCAACTCACGAAATCTCTGGCAGACATCA
CTGCAAAGCTGCAGAAGGGCAGTCCGCACTTCATCCTTTGCGTCAAGCCTAATACCTCACAGCT
ACCTGGTGTGTTCGATCACTTCTACGTGTCTGCCCAACTGCAGTACCTCGGTGTCCTAGGGCTG
GTGAGGCTGTTCCGCTATGGGTACCCAGTGCGCCCTTCCTTCGAGGACTTCCTGTCCAGATATG
AGCCACTGGCTTCTGTCCTCCTGGGTGAGAAGAAGGGTCAGCCCGCCGAGGAGAGATGTCGGCT
GGTTCTCCAGCGGTGTAAACTACAAGGTTGGCAGATGGGCGTCCACAAAGTGTTCCTGAAGTAC
TGGCAGGTGGACCAGCTCGGTGACCTGTGGCTCCAGATGCAAAGGAAGATTGTAACTTGTCAGA
AAGTTATAAGAGGGTTTCTAGCCCGCCAGCACTTACTTCAGAGAATGAGCATCAAGCAGCAAGA
GGTTACATCCATCAAGAGCTTCTTACAGAGCACAGAGGACATGGCACTGAAAACCTATGATGCC
CTGGTTATTCAGAACGCTTCTGACATTGCCCGGGAACATGATAGGCTCCGGAAGGAGGTCCATG
CTGCCTACCACAGGAACAGACAAGAGGAAGGAACCAAGAGAGCTGAAGACCAGGGAGGATGCCG
GCATGCCCATTCCAACTCGGTTCCCGTGCCCATGGCAGTGGACAGCCTTGCCCAGGCTCTCGCC
GGCCCGTCCAGTCGGTCCCCATCACTGCACTCTGTGTTCAGCATGGATGACAGCACTGGCCTCC
CGTCACCACGGAAACAGCCTCCACCCAAGCCAAAGAGGGACCCCAACACCCGGCTGAGTGCCTC
CTATGAGGCTGTGAGCGCCTGCCTTTCGGCCACCAAGGATGCAGCCAGCGAAGCTCTGACACGG
CCCAGACCCCACAGTGATGATTACAGTACCATGAAGAAAATTCCCCCTCGGAAGCCAAAGAGAA
GTCCCCACACGAAGCTCAGTGGCTCTTATGAGGAGATCTGGGGACCGAGGCCTTCTGGTACAAT
GGGCCAGGTGGGCAAACATCATGCCCCAGGGACACTGGGTGTGCAGTGGGCCAGTCCTGACTCC
ATGCCACAGTGCACACCCCAGCTGCCTCTGCACCTGCCATTGCCACAGGGTGACTATGACGATG
ACGGCGAGCCTGTGTATATCGAGATGGTAGGGAACGCAGCCAGGGCAGGCGGATCTGAGACTGA
CAGCCCTGACCAGGGCGAGTCTGTGTATGAGGAGATGAAGTACGTCTTGCCTGAGGAGGGCTGT
GGTCCAGGGATGCTCACCTTCCTGCCTGCCTCGCCACCTCTGTTTTTAGAGACCCGAAAAGCCA
TCATCTTGGAGGCTGGAGAGGGGAGCTGCCAGCCCCTGAAGGACACGTGTGACATCCCCCCACC
CTTCCCGAATCTGCTTCCCCATAGGCCGCCGCTCCTGGTCTTTCCTCCCACCCCAGTGACCTGC
TCCCCAGCTTCTGATGAGTCTCCACTGACACCCTTGGAGGTAAAGAAACTGCCAGTCTTAGAGA
CCAACCTCAAGTACCCAGTGCAGTCCGAAGGCTCCAGTCCCTTGTCACCACAGTACTCAAAAGC
ACAGAAGGGAGAAAATGACCAGCTGACGTCTCCTGGCTTTCCTGTGTTTAATGGGCCCAGCCGA
ATCTCACCACCTGCCACACCACCGCCACCTCCAGGGCCACCTCCTGCACCCTGTGGGCCACCTT
CTGCACCCTGTGGGCCACCTCCTGCACCGTGTGGGCCACCTCCTGTACCCTGTGGGCCACCTCC
TGCACCCTGTGGGCCACCTCCTGCACCCTGTGGGGCAGCCCCTGCACCCTGCAGGCCACCCACA
CACTTTGCCTTTCCACCAGATTCTGTCTTGGTCACTGCAGCTAAAGCACTGACTAACTCTGACC
TGCCCAGAACACAGCCAAAGCCCAGTTCAGCCCCAGTACTGGGTCCCTGCAGCCCCTTTGTCAA
GGCTCCATATTCACCCGGAAGGACAGCCAGAGCAGACCTCAGGAAGGCCTCATCCACCTTCTCC
CCACCGAGCCCTTACAGCCCACCCAACAGCAGGCCGCTGTCCAGCCCTCTGGATGAGCTGGCCA
GCCTCTTCAACTCGGGAAGGAGTGTGCTACGCAGGTCTGCAGTGGGACGAAGGATCAGGGAGGC
TGAAGGTTTTGAAACTAACATGAACCTGAGTAGCCGGGATGAACCCAGCTCATCAGAAATGGCT
TCCGAGACTCAAGACAGAAACGCAAACAACCACGGGACTCAGCTCTCCAGCTCCCTGTCCAGTG
TCGTCGCGGCTGAAAATGGAAATCCTGTCACCAACGGTTTAGCTGAGGACGATGGGTGCTCAAG
GCTGTGTCTGAGTGGCATGGGGACTTCATCATTTCAGAGACATCGGGAGAGCCACACCACCCAG
GTTATCCATCAGCTGAGGCTCTCCGAGAATGAAAGCGTAGCTCTTCAGGAGCTGCTGGACTGGA
GGAGGAAGCTCTGTGAGTCCAGAGAAGGCTGGCAGGAAGCCATGCAGCACCCAGAGCCCCGCGC
ACCTCCACCGCCACCCTGCAAGAAGCCGACACTCCTAAAGAAGCCGGAGGGGGGCTCCTGCACT
AGGCTGTCTTCCCAACTCTGGGACAGTAGTATCTGATACAGCCTGGACTGTGAGCACCTGTCAG
AGCTGTCTAGTGACTTCGGGCTGCTTCTGCAGGAGGCTGCCTTCGGATGCCTGAGGTCTCCTCT
CCAGGCATCTCCACAAAAGCACAGGACACTAATGATGACTACCCAGGACCTCCCGCGTGTGTGA
GGGTCTGCGTGTGCTCACTGGTTCCTTCTCCATTTCTTGATAGCACACTAAATCTTAGGGCCAC
CCTGCTTCCAGATAGCCAGAGGCAAGGAGGCATGTGGCTGAGGTCAGAGGTCAGAGCAGTGGGG
GGAGGTCCTCCAGGCAGCTGTTTCTAGTACACCCCACAGTGGCCACGACCCAACCGGTGGCTGT
CATATGGTGCAGCACATAGGATGTGTGTTTCGTTTCTTTGTAGTTGTCTGTCATTAGAATTACA
AACCCAACGATGTTTTACATGTTTATTACCGTATTTTATAACGTTATGCAACTGGCGTGTTCCC
TTTCATCAAAATACAGATTTAAAAAAAAAAACATTTCTAGGGTTTTTTTTTTTTTAATTCTACG
TGCTTATTTTTAACCCAAAGCCCCCAAAGGCGTGGGAACTGTGCGTTGCCTTGGCTTTAACAGA
TGCCTACAGCAATGCTAGAGTTTATGTGCCCTGTCCCTCTACTCTTCCCTGCACCCAGCATCTC
CCTTGGGTACATGTGGCTTCAGCATTCACTGGTTAAGCTTCGTTCCCACCCAACCCCTCAGTTC
GGTGTAGATGACAGGATGTTTACGGTTCAAAACATATGGCTTCAAGTTCCTAGCTGATGATACA
GGACTTTCAACAGGACTGACAAGCAGGCTGAGTCTCGTGGGACAGAGCAGTGTGCTGCCCTCCC
TAGGAACACTGCATGACTCCCTTGCTGTATGCCCGACCGGCTGTCATGCGTGTGATGGCCTTGC
TTCTCCATGTCTTTCTGCCTACTGTCCGTGAGTTCTGAGCGGTGGCTCTACCAGCCATCTGCCA
CCTCCTCCCACCACTTGGACCTGTTCACTCATTTCCACCATTGCAGAGCTTCTGTGCCAATAAA
AGGGTGCAACTGTA

hide sequence

RefSeq Acc Id:

XM_017599990 ⟹ XP_017455479

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	85,586,428 - 86,066,537 (-)	NCBI
mRatBN7.2	16	78,884,405 - 79,364,445 (-)	NCBI
Rnor_6.0	16	84,575,149 - 85,177,834 (-)	NCBI

Sequence:

show sequence

GGGCGCCAGGACCAAGCGACAGCCCTGGTGGTTGCGTGGGGATCCAGAGTGACCAAGAGGACCA
GAAGGGACCGGGAACCCAGCTGTGGGCTATGTAGGGAGGGGGCGGAGCGCGGACCGAGTGGGCA
GGGACAGAGCTGCGGTTGGAGGGGCGGGGGCTGCGAGCTGCCAGCGGGTGGAGTCGGGGTCCCC
AGCGCTTCTCAGCGCAGCGCATCTCCTCCTGTCTGTGCTCGGTGGCCGGGCGTCCAGCAGCAGA
GGAGAGCCGGACTGTCCGTTGCTGGGTCGTGGGACACCGGGGATCCGTCTTCAGCAGGTTGCTA
CCAGCTATGTAATGTTTTTCGATCTCATGAGATGGAAATTGACCAGTGCTTGCTGGAGTCCCTC
CCCCTGGGCCAGCGGCAGCGTCTGGTGAGGCGCATGCGCTGTGAGCAAATCAAAGCCTACTATG
AGCGAGAGAAAGTGTTCCAGAAGCAGGAAGGGCTCCTGAAGAGAATTAAGCCTGGGAAAAGCCA
GAAGGTCCGCTTCGGCCTGGCTGACATGATTCAGGATGCCATTATCCACCACCACGACAAAGAG
GTGCTTCAACTCTTGAAGGAGGGGGCCGACCCACACACTCTTGTTTCCTCAGGAGGGTCTTTAC
TTCACCTGTGTGCTCGCTATGACAATGTCTTCATCGCAGAAGTCCTCATTGACAGGGGTGTCAA
TGTCAACCACCAGGATGAGGACTTTTGGGCCCCAATGCACATTGCCTGTGCCTGTGACAACCCT
GACATTGTCCTGTTGCTCATATTAGCTGGAGCCAACGTCCTTCTGCAAGATGTGAATGGAAATA
TCCCGTTAGATTACGCTGTCGAAGGGACAGAATCTAGTGCTATCCTGCTGGCCTATTTGGATGA
AAACGGGGTGGACCTGAACTCTCTGCGCCAGATAAAGCTGCAGCGGCCCCTGAGTATGCTGACA
GACGTCAGGCACTTCCTGTCTTCAGGTGGAGATGTCAACGAGAAAAATGATGACGGGGTGACCC
TGCTGCACATGGCGTGTGCCAGTGGCTACAAAGAGGTGGTGCTGCTCCTCTTAGAACATGGCGG
AGACCTCAATGGGATGGATGATGGGTACTGGACACCCCTGCATTTAGCAGCCAAGTATGGCCAG
ACAACCCTGGTGAAGCTCCTTCTGGCACATCAGGCAAACCCCCACCTTGTGAACTGCAATGGGG
AGAAACCATCAGACATCGCTGCCTCTGAGTCTATTGAGGAGATGCTGCTGAAAGCAGAGATTGC
CTGGGAGGAGAGAATGAAAGAGTCCCCGTCTGTTCCTAGCTTAGCACAGGAGGAGCTGTATGAG
GAGATCCTTCACGACCTCCCGGAGCTTTCCAGTAAGCTCAGTCCTCTGGTGCTACCAATTGCCA
AGCAGGACAGTTTGCTGGAAAAAGACATTATGTTCAAAGACACAACAAAAGGTCTGTGCAACCA
GGAATCCCAGGATGGCCCTCCTGAGACCAGCATGGTGAGCAGCTCCAGCAAGCCAGAACAGGTC
CAGCTCACGCCTCCAGCTCCCAGTGATGACCTGGCCACACTCAGCGAGCTGAATGACAGCAGCC
TGCTCTATGAAATCCAGAAGCGCTTCGGGAATGACCAGATACACACCTTCATCGGAGACATCTT
TTTGCTCGTTAACCCTTTCAAAGAACTCCCAATTTACTCCACTGTGGTGTCCCAAATGTACCTG
AGCCCCACAGGCCAGCGCAGCCCCTCACTGCCACCCCACCTCTTCTCCTGTGCAGAGAGAGCCT
TCCACAGGCTGTTCCAGGAGCGAAGGCCACAGAACATCATCCTCAGTGGAGAAAGAGGTTCGGG
GAAGACCCAGGCCAGCAAGCAAATCATGAAGCACCTTACCAGCAGGGCCAGCTCCAGCTGTACC
ATGTTTGACTCCAGATTCAAGCATGCCATATGCATCTTGGAGGCCTTCGGACATGCCAAGACCA
CACTCAACAACGTATCCAGTTGCCTCATACAGTACTGGGAACTGCAGTTCTGTCAGAGGAGAAA
ACACGTAACTGGAGCCAGAATTTCCACTTACATGCTGGAGAAGCCCAGGCTTGTGGCTCAGCCT
CCTGGCCAGGGCAGCTTCCTGATTTTCTCCTGGTTGATGGACGGCTTATCCGCAGAAGAAAAAT
GTGGACTTCACCTTAGTAACTTCTGTGCACACCGGTACGTGAGCCAAGGCATGCGGGAAGATGT
GTCCACAGCAGAGCGTTCTCTGAACAAGGAGAGACTTGCAGATCTGAAACATGCTCTGAATGTA
ATTGGCTTCAGCGCCTTGGAGGTGGAGAACCTGTTCGCTATCCTGTCGGCGATCTTACACATCG
GAGACATCCAGTTCACCGCGCTGACGGAAGCTGACTCGGCCTTTGTCTCTGACCTCCAGCTTCT
GGAACAAGTGGCAGACATGTTGCAAGTGTCGACAGATGAGCTGGCATCCGCCCTAACAACTGAT
ATTCAGTATTTTAAAGGAGATGTGATAATACGTCGACACACCACCCAGATCGCTGCATTTTACC
GAGACCTCCTGGCCAAGTCGCTGTACAGCCGATTGTTTGGTTTTCTGATAAACACTGTGAATTG
CTGCCTCCAGAGTCAAGATGAATATAAAAGCCTACAGACATTGGATATTGGAATACTGGACATT
TTTGGTTTTGAGGAATTTCAAAAGAATGAATTTGAACAACTCTGTGTCAACCTGACCAACGAAA
AAATGCACCACTATATCCAAGAAGTGCTTTTCCTACAAGAGCAAACAGAGTGTGTACAAGAGGG
AGTTGCCATGGAAACTGCCTGTTCTCCTGGTAACCAGGCTGGAGTTTTGGATTTCTTCTTCCAG
AAACCATCAGGATTCTTCTCCCTATTGGACGAGGAGAGTCAAGCGATTTGGTCAGTGGAGCCAA
ACCTTCCCAGGAAGCTGCAGGGTCTCCTGGAATCATCAAACACAAATGCAGTCTATTCCCCCAT
GAAGGACGGCAACGGGAATGTTGCTTTCAAAGGTCAAGGCGCAGCCTTCACTGTCATGCACTAC
GCAGGAAGGGTAACGTATGAAATCAGAGGAGCGGTGGAAAGGAATAAAGACTCTCTTTCACAGA
ACCTCCTATTTGTAATGAAAACAAGTGAAAATGTCGTGATCAGTCACCTGTTCCAGTCAAAACT
CTCACCGACGGGATCGCTCATATCTTCCTACCCATCCTTTAAATTTGGAGGACACAAATCCAGC
CTGCTCAGTAAGAGAATTGCCTCTTCAATGGTTGGAGTGAACAAGAATTACCTAGAACTTAGCA
AGTTATTAAAAAAGAAGGGAACTTGCACATTCCTACAAAGACTGGAACGCGGAGACCCCGCCAC
TACTGCGTCGCAACTCACGAAATCTCTGGCAGACATCACTGCAAAGCTGCAGAAGGGCAGTCCG
CACTTCATCCTTTGCGTCAAGCCTAATACCTCACAGCTACCTGGTGTGTTCGATCACTTCTACG
TGTCTGCCCAACTGCAGTACCTCGGTGTCCTAGGGCTGGTGAGGCTGTTCCGCTATGGGTACCC
AGTGCGCCCTTCCTTCGAGGACTTCCTGTCCAGATATGAGCCACTGGCTTCTGTCCTCCTGGGT
GAGAAGAAGGGTCAGCCCGCCGAGGAGAGATGTCGGCTGGTTCTCCAGCGGTGTAAACTACAAG
GTTGGCAGATGGGCGTCCACAAAGTGTTCCTGAAGTACTGGCAGGTGGACCAGCTCGGTGACCT
GTGGCTCCAGATGCAAAGGAAGATTGTAACTTGTCAGAAAGTTATAAGAGGGTTTCTAGCCCGC
CAGCACTTACTTCAGAGAATGAGCATCAAGCAGCAAGAGGTTACATCCATCAAGAGCTTCTTAC
AGAGCACAGAGGACATGGCACTGAAAACCTATGATGCCCTGGTTATTCAGAACGCTTCTGACAT
TGCCCGGGAACATGATAGGCTCCGGAAGGAGGTCCATGCTGCCTACCACAGGAACAGACAAGAG
GAAGGAACCAAGAGAGCTGAAGACCAGGGAGGATGCCGGCATGCCCATTCCAACTCGGTTCCCG
TGCCCATGGCAGTGGACAGCCTTGCCCAGGCTCTCGCCGGCCCGTCCAGTCGGTCCCCATCACT
GCACTCTGTGTTCAGCATGGATGACAGCACTGGCCTCCCGTCACCACGGAAACAGCCTCCACCC
AAGCCAAAGAGGGACCCCAACACCCGGCTGAGTGCCTCCTATGAGGCTGTGAGCGCCTGCCTTT
CGGCCACCAAGGATGCAGCCAGCGAAGCTCTGACACGGCCCAGACCCCACAGTGATGATTACAG
TACCATGAAGAAAATTCCCCCTCGGAAGCCAAAGAGAAGTCCCCACACGAAGCTCAGTGGCTCT
TATGAGGAGATCTGGGGACCGAGGCCTTCTGGTACAATGGGCCAGGTGGGCAAACATCATGCCC
CAGGGACACTGGGTGTGCAGTGGGCCAGTCCTGACTCCATGCCACAGTGCACACCCCAGCTGCC
TCTGCACCTGCCATTGCCACAGGGTGACTATGACGATGACGGCGAGCCTGTGTATATCGAGATG
GTAGGGAACGCAGCCAGGGCAGGCGGATCTGAGACTGACAGCCCTGACCAGGGCGAGTCTGTGT
ATGAGGAGATGAAGTACGTCTTGCCTGAGGAGGGCTGTGGTCCAGGGATGCTCACCTTCCTGCC
TGCCTCGCCACCTCTGTTTTTAGAGACCCGAAAAGCCATCATCTTGGAGGCTGGAGAGGGGAGC
TGCCAGCCCCTGAAGGACACGTGTGACATCCCCCCACCCTTCCCGAATCTGCTTCCCCATAGGC
CGCCGCTCCTGGTCTTTCCTCCCACCCCAGTGACCTGCTCCCCAGCTTCTGATGAGTCTCCACT
GACACCCTTGGAGGTAAAGAAACTGCCAGTCTTAGAGACCAACCTCAAGTACCCAGTGCAGTCC
GAAGGCTCCAGTCCCTTGTCACCACAGTACTCAAAAGCACAGAAGGGAGAAAATGACCAGCTGA
CGTCTCCTGGCTTTCCTGTGTTTAATGGGCCCAGCCGAATCTCACCACCTGCCACACCACCGCC
ACCTCCAGGGCCACCTCCTGCACCCTGTGGGCCACCTTCTGCACCCTGTGGGCCACCTCCTGCA
CCGTGTGGGCCACCTCCTGTACCCTGTGGGCCACCTCCTGCACCCTGTGGGCCACCTCCTGCAC
CCTGTGGGGCAGCCCCTGCACCCTGCAGGCCACCCACACACTTTGCCTTTCCACCAGATTCTGT
CTTGGTCACTGCAGCTAAAGCACTGACTAACTCTGACCTGCCCAGAACACAGCCAAAGCCCAGT
TCAGCCCCAGTACTGGGTCCCTGCAGCCCCTTTGTCAAGGCTCCATATTCACCCGGAAGGACAG
CCAGAGCAGACCTCAGGAAGGCCTCATCCACCTTCTCCCCACCGAGCCCTTACAGCCCACCCAA
CAGCAGGCCGCTGTCCAGCCCTCTGGATGAGCTGGCCAGCCTCTTCAACTCGGGAAGGAGTGTG
CTACGCAGGTCTGCAGTGGGACGAAGGATCAGGGAGGCTGAAGGTTTTGAAACTAACATGAACC
TGAGTAGCCGGGATGAACCCAGCTCATCAGAAATGGCTTCCGAGACTCAAGACAGAAACGCAAA
CAACCACGGGACTCAGCTCTCCAGCTCCCTGTCCAGTGTCGTCGCGGCTGAAAATGGAAATCCT
GTCACCAACGGTTTAGCTGAGGACGATGGGTGCTCAAGGCTGTGTCTGAGTGGCATGGGGACTT
CATCATTTCAGAGACATCGGGAGAGCCACACCACCCAGGTTATCCATCAGCTGAGGCTCTCCGA
GAATGAAAGCGTAGCTCTTCAGGAGCTGCTGGACTGGAGGAGGAAGCTCTGTGAGTCCAGAGAA
GGCTGGCAGGAAGCCATGCAGCACCCAGAGCCCCGCGCACCTCCACCGCCACCCTGCAAGAAGC
CGACACTCCTAAAGAAGCCGGAGGGGGGCTCCTGCACTAGGCTGTCTTCCCAACTCTGGGACAG
TAGTATCTGATACAGCCTGGACTGTGAGCACCTGTCAGAGCTGTCTAGTGACTTCGGGCTGCTT
CTGCAGGAGGCTGCCTTCGGATGCCTGAGGTCTCCTCTCCAGGCATCTCCACAAAAGCACAGGA
CACTAATGATGACTACCCAGGACCTCCCGCGTGTGTGAGGGTCTGCGTGTGCTCACTGGTTCCT
TCTCCATTTCTTGATAGCACACTAAATCTTAGGGCCACCCTGCTTCCAGATAGCCAGAGGCAAG
GAGGCATGTGGCTGAGGTCAGAGGTCAGAGCAGTGGGGGGAGGTCCTCCAGGCAGCTGTTTCTA
GTACACCCCACAGTGGCCACGACCCAACCGGTGGCTGTCATATGGTGCAGCACATAGGATGTGT
GTTTCGTTTCTTTGTAGTTGTCTGTCATTAGAATTACAAACCCAACGATGTTTTACATGTTTAT
TACCGTATTTTATAACGTTATGCAACTGGCGTGTTCCCTTTCATCAAAATACAGATTTAAAAAA
AAAAACATTTCTAGGGTTTTTTTTTTTTTAATTCTACGTGCTTATTTTTAACCCAAAGCCCCCA
AAGGCGTGGGAACTGTGCGTTGCCTTGGCTTTAACAGATGCCTACAGCAATGCTAGAGTTTATG
TGCCCTGTCCCTCTACTCTTCCCTGCACCCAGCATCTCCCTTGGGTACATGTGGCTTCAGCATT
CACTGGTTAAGCTTCGTTCCCACCCAACCCCTCAGTTCGGTGTAGATGACAGGATGTTTACGGT
TCAAAACATATGGCTTCAAGTTCCTAGCTGATGATACAGGACTTTCAACAGGACTGACAAGCAG
GCTGAGTCTCGTGGGACAGAGCAGTGTGCTGCCCTCCCTAGGAACACTGCATGACTCCCTTGCT
GTATGCCCGACCGGCTGTCATGCGTGTGATGGCCTTGCTTCTCCATGTCTTTCTGCCTACTGTC
CGTGAGTTCTGAGCGGTGGCTCTACCAGCCATCTGCCACCTCCTCCCACCACTTGGACCTGTTC
ACTCATTTCCACCATTGCAGAGCTTCTGTGCCAATAAAAGGGTGCAACTGTA

hide sequence

RefSeq Acc Id:

XM_039094188 ⟹ XP_038950116

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	16	85,586,428 - 85,974,200 (-)	NCBI
mRatBN7.2	16	78,884,405 - 79,272,218 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_620248	(Get FASTA)	NCBI Sequence Viewer
	XP_008769606	(Get FASTA)	NCBI Sequence Viewer
	XP_017455479	(Get FASTA)	NCBI Sequence Viewer
	XP_038950116	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF20150	(Get FASTA)	NCBI Sequence Viewer
	AAG23288	(Get FASTA)	NCBI Sequence Viewer
	EDM08806	(Get FASTA)	NCBI Sequence Viewer
	EDM08807	(Get FASTA)	NCBI Sequence Viewer
	EDM08808	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022741
	ENSRNOP00000022741.4
	ENSRNOP00000095008
GenBank Protein	Q9ERC1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_620248 ⟸ NM_138893

- UniProtKB:

Q9QXI0 (UniProtKB/Swiss-Prot), Q9ERC1 (UniProtKB/Swiss-Prot), A6IWR4 (UniProtKB/TrEMBL), A0A8I6ANW7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEIDQCLLESLPLGQRQRLVRRMRCEQIKAYYEREKVFQKQEGLLKRIKPGKSQKVRFGLADMI
QDAIIHHHDKEVLQLLKEGADPHTLVSSGGSLLHLCARYDNVFIAEVLIDRGVNVNHQDEDFWA
PMHIACACDNPDIVLLLILAGANVLLQDVNGNIPLDYAVEGTESSAILLAYLDENGVDLNSLRQ
IKLQRPLSMLTDVRHFLSSGGDVNEKNDDGVTLLHMACASGYKEVVLLLLEHGGDLNGMDDGYW
TPLHLAAKYGQTTLVKLLLAHQANPHLVNCNGEKPSDIAASESIEEMLLKAEIAWEERMKESPS
VPSLAQEELYEEILHDLPELSSKLSPLVLPIAKQDSLLEKDIMFKDTTKGLCNQESQDGPPETS
MVSSSSKPEQVQLTPPAPSDDLATLSELNDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKELP
IYSTVVSQMYLSPTGQRSPSLPPHLFSCAERAFHRLFQERRPQNIILSGERGSGKTQASKQIMK
HLTSRASSSCTMFDSRFKHAICILEAFGHAKTTLNNVSSCLIQYWELQFCQRRKHVTGARISTY
MLEKPRLVAQPPGQGSFLIFSWLMDGLSAEEKCGLHLSNFCAHRYVSQGMREDVSTAERSLNKE
RLADLKHALNVIGFSALEVENLFAILSAILHIGDIQFTALTEADSAFVSDLQLLEQVADMLQVS
TDELASALTTDIQYFKGDVIIRRHTTQIAAFYRDLLAKSLYSRLFGFLINTVNCCLQSQDEYKS
LQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPG
NQAGVLDFFFQKPSGFFSLLDEESQAIWSVEPNLPRKLQGLLESSNTNAVYSPMKDGNGNVAFK
GQGAAFTVMHYAGRVTYEIRGAVERNKDSLSQNLLFVMKTSENVVISHLFQSKLSPTGSLISSY
PSFKFGGHKSSLLSKRIASSMVGVNKNYLELSKLLKKKGTCTFLQRLERGDPATTASQLTKSLA
DITAKLQKGSPHFILCVKPNTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRYGYPVRPSFEDFLS
RYEPLASVLLGEKKGQPAEERCRLVLQRCKLQGWQMGVHKVFLKYWQVDQLGDLWLQMQRKIVT
CQKVIRGFLARQHLLQRMSIKQQEVTSIKSFLQSTEDMALKTYDALVIQNASDIAREHDRLRKE
VHAAYHRNRQEEGTKRAEDQGGCRHAHSNSVPVPMAVDSLAQALAGPSSRSPSLHSVFSMDDST
GLPSPRKQPPPKPKRDPNTRLSASYEAVSACLSATKDAASEALTRPRPHSDDYSTMKKIPPRKP
KRSPHTKLSGSYEEIWGPRPSGTMGQVGKHHAPGTLGVQWASPDSMPQCTPQLPLHLPLPQGDY
DDDGEPVYIEMVGNAARAGGSETDSPDQGESVYEEMKYVLPEEGCGPGMLTFLPASPPLFLETR
KAIILEAGEGSCQPLKDTCDIPPPFPNLLPHRPPLLVFPPTPVTCSPASDESPLTPLEVKKLPV
LETNLKYPVQSEGSSPLSPQYSKAQKGENDQLTSPGFPVFNGPSRISPPATPPPPPGPPPAPCG
PPSAPCGPPPAPCGPPPVPCGPPPAPCGPPPAPCGAAPAPCRPPTHFAFPPDSVLVTAAKALTN
SDLPRTQPKPSSAPVLGPCSPFVKAPYSPGRTARADLRKASSTFSPPSPYSPPNSRPLSSPLDE
LASLFNSGRSVLRRSAVGRRIREAEGFETNMNLSSRDEPSSSEMASETQDRNANNHGTQLSSSL
SSVVAAENGNPVTNGLAEDDGCSRLCLSGMGTSSFQRHRESHTTQVIHQLRLSENESVALQELL
DWRRKLCESREGWQEAMQHPEPRAPPPPPCKKPTLLKKPEGGSCTRLSSQLWDSSI

hide sequence

RefSeq Acc Id:	XP_008769606 ⟸ XM_008771384
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6ANW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSQYHFIKCCCYQLCNVFRSHEMEIDQCLLESLPLGQRQRLVRRMRCEQIKAYYEREKVFQKQE GLLKRIKPGKSQKVRFGLADMIQDAIIHHHDKEVLQLLKEGADPHTLVSSGGSLLHLCARYDNV FIAEVLIDRGVNVNHQDEDFWAPMHIACACDNPDIVLLLILAGANVLLQDVNGNIPLDYAVEGT ESSAILLAYLDENGVDLNSLRQIKLQRPLSMLTDVRHFLSSGGDVNEKNDDGVTLLHMACASGY KEVVLLLLEHGGDLNGMDDGYWTPLHLAAKYGQTTLVKLLLAHQANPHLVNCNGEKPSDIAASE SIEEMLLKAEIAWEERMKESPSVPSLAQEELYEEILHDLPELSSKLSPLVLPIAKQDSLLEKDI MFKDTTKGLCNQESQDGPPETSMVSSSSKPEQVQLTPPAPSDDLATLSELNDSSLLYEIQKRFG NDQIHTFIGDIFLLVNPFKELPIYSTVVSQMYLSPTGQRSPSLPPHLFSCAERAFHRLFQERRP QNIILSGERGSGKTQASKQIMKHLTSRASSSCTMFDSRFKHAICILEAFGHAKTTLNNVSSCLI QYWELQFCQRRKHVTGARISTYMLEKPRLVAQPPGQGSFLIFSWLMDGLSAEEKCGLHLSNFCA HRYVSQGMREDVSTAERSLNKERLADLKHALNVIGFSALEVENLFAILSAILHIGDIQFTALTE ADSAFVSDLQLLEQVADMLQVSTDELASALTTDIQYFKGDVIIRRHTTQIAAFYRDLLAKSLYS RLFGFLINTVNCCLQSQDEYKSLQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVL FLQEQTECVQEGVAMETACSPGNQAGVLDFFFQKPSGFFSLLDEESQAIWSVEPNLPRKLQGLL ESSNTNAVYSPMKDGNGNVAFKGQGAAFTVMHYAGRVTYEIRGAVERNKDSLSQNLLFVMKTSE NVVISHLFQSKLSPTGSLISSYPSFKFGGHKSSLLSKRIASSMVGVNKNYLELSKLLKKKGTCT FLQRLERGDPATTASQLTKSLADITAKLQKGSPHFILCVKPNTSQLPGVFDHFYVSAQLQYLGV LGLVRLFRYGYPVRPSFEDFLSRYEPLASVLLGEKKGQPAEERCRLVLQRCKLQGWQMGVHKVF LKYWQVDQLGDLWLQMQRKIVTCQKVIRGFLARQHLLQRMSIKQQEVTSIKSFLQSTEDMALKT YDALVIQNASDIAREHDRLRKEVHAAYHRNRQEEGTKRAEDQGGCRHAHSNSVPVPMAVDSLAQ ALAGPSSRSPSLHSVFSMDDSTGLPSPRKQPPPKPKRDPNTRLSASYEAVSACLSATKDAASEA LTRPRPHSDDYSTMKKIPPRKPKRSPHTKLSGSYEEIWGPRPSGTMGQVGKHHAPGTLGVQWAS PDSMPQCTPQLPLHLPLPQGDYDDDGEPVYIEMVGNAARAGGSETDSPDQGESVYEEMKYVLPE EGCGPGMLTFLPASPPLFLETRKAIILEAGEGSCQPLKDTCDIPPPFPNLLPHRPPLLVFPPTP VTCSPASDESPLTPLEVKKLPVLETNLKYPVQSEGSSPLSPQYSKAQKGENDQLTSPGFPVFNG PSRISPPATPPPPPGPPPAPCGPPSAPCGPPPAPCGPPPVPCGPPPAPCGPPPAPCGAAPAPCR PPTHFAFPPDSVLVTAAKALTNSDLPRTQPKPSSAPVLGPCSPFVKAPYSPGRTARADLRKASS TFSPPSPYSPPNSRPLSSPLDELASLFNSGRSVLRRSAVGRRIREAEGFETNMNLSSRDEPSSS EMASETQDRNANNHGTQLSSSLSSVVAAENGNPVTNGLAEDDGCSRLCLSGMGTSSFQRHRESH TTQVIHQLRLSENESVALQELLDWRRKLCESREGWQEAMQHPEPRAPPPPPCKKPTLLKKPEGG SCTRLSSQLWDSSI hide sequence

RefSeq Acc Id:	XP_017455479 ⟸ XM_017599990
- Peptide Label:	isoform X3
- UniProtKB:	Q9QXI0 (UniProtKB/Swiss-Prot), Q9ERC1 (UniProtKB/Swiss-Prot), A6IWR4 (UniProtKB/TrEMBL), A0A8I6ANW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEIDQCLLESLPLGQRQRLVRRMRCEQIKAYYEREKVFQKQEGLLKRIKPGKSQKVRFGLADMI QDAIIHHHDKEVLQLLKEGADPHTLVSSGGSLLHLCARYDNVFIAEVLIDRGVNVNHQDEDFWA PMHIACACDNPDIVLLLILAGANVLLQDVNGNIPLDYAVEGTESSAILLAYLDENGVDLNSLRQ IKLQRPLSMLTDVRHFLSSGGDVNEKNDDGVTLLHMACASGYKEVVLLLLEHGGDLNGMDDGYW TPLHLAAKYGQTTLVKLLLAHQANPHLVNCNGEKPSDIAASESIEEMLLKAEIAWEERMKESPS VPSLAQEELYEEILHDLPELSSKLSPLVLPIAKQDSLLEKDIMFKDTTKGLCNQESQDGPPETS MVSSSSKPEQVQLTPPAPSDDLATLSELNDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKELP IYSTVVSQMYLSPTGQRSPSLPPHLFSCAERAFHRLFQERRPQNIILSGERGSGKTQASKQIMK HLTSRASSSCTMFDSRFKHAICILEAFGHAKTTLNNVSSCLIQYWELQFCQRRKHVTGARISTY MLEKPRLVAQPPGQGSFLIFSWLMDGLSAEEKCGLHLSNFCAHRYVSQGMREDVSTAERSLNKE RLADLKHALNVIGFSALEVENLFAILSAILHIGDIQFTALTEADSAFVSDLQLLEQVADMLQVS TDELASALTTDIQYFKGDVIIRRHTTQIAAFYRDLLAKSLYSRLFGFLINTVNCCLQSQDEYKS LQTLDIGILDIFGFEEFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPG NQAGVLDFFFQKPSGFFSLLDEESQAIWSVEPNLPRKLQGLLESSNTNAVYSPMKDGNGNVAFK GQGAAFTVMHYAGRVTYEIRGAVERNKDSLSQNLLFVMKTSENVVISHLFQSKLSPTGSLISSY PSFKFGGHKSSLLSKRIASSMVGVNKNYLELSKLLKKKGTCTFLQRLERGDPATTASQLTKSLA DITAKLQKGSPHFILCVKPNTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRYGYPVRPSFEDFLS RYEPLASVLLGEKKGQPAEERCRLVLQRCKLQGWQMGVHKVFLKYWQVDQLGDLWLQMQRKIVT CQKVIRGFLARQHLLQRMSIKQQEVTSIKSFLQSTEDMALKTYDALVIQNASDIAREHDRLRKE VHAAYHRNRQEEGTKRAEDQGGCRHAHSNSVPVPMAVDSLAQALAGPSSRSPSLHSVFSMDDST GLPSPRKQPPPKPKRDPNTRLSASYEAVSACLSATKDAASEALTRPRPHSDDYSTMKKIPPRKP KRSPHTKLSGSYEEIWGPRPSGTMGQVGKHHAPGTLGVQWASPDSMPQCTPQLPLHLPLPQGDY DDDGEPVYIEMVGNAARAGGSETDSPDQGESVYEEMKYVLPEEGCGPGMLTFLPASPPLFLETR KAIILEAGEGSCQPLKDTCDIPPPFPNLLPHRPPLLVFPPTPVTCSPASDESPLTPLEVKKLPV LETNLKYPVQSEGSSPLSPQYSKAQKGENDQLTSPGFPVFNGPSRISPPATPPPPPGPPPAPCG PPSAPCGPPPAPCGPPPVPCGPPPAPCGPPPAPCGAAPAPCRPPTHFAFPPDSVLVTAAKALTN SDLPRTQPKPSSAPVLGPCSPFVKAPYSPGRTARADLRKASSTFSPPSPYSPPNSRPLSSPLDE LASLFNSGRSVLRRSAVGRRIREAEGFETNMNLSSRDEPSSSEMASETQDRNANNHGTQLSSSL SSVVAAENGNPVTNGLAEDDGCSRLCLSGMGTSSFQRHRESHTTQVIHQLRLSENESVALQELL DWRRKLCESREGWQEAMQHPEPRAPPPPPCKKPTLLKKPEGGSCTRLSSQLWDSSI hide sequence

Ensembl Acc Id:

ENSRNOP00000022741 ⟸ ENSRNOT00000022742

RefSeq Acc Id:	XP_038950116 ⟸ XM_039094188
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6ANW7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000096592 ⟸ ENSRNOT00000099053

Ensembl Acc Id:

ENSRNOP00000104703 ⟸ ENSRNOT00000157694

Ensembl Acc Id:

ENSRNOP00000103694 ⟸ ENSRNOT00000167515

Protein Domains

IQ Myosin motor

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9ERC1-F1-model_v2	AlphaFold	Q9ERC1	1-1912	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621561	AgrOrtholog
BioCyc Gene	G2FUF-10617	BioCyc
Ensembl Genes	ENSRNOG00000016483	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000022742	ENTREZGENE
	ENSRNOT00000022742.4	UniProtKB/Swiss-Prot
	ENSRNOT00000076341	ENTREZGENE
Gene3D-CATH	1.10.10.820	UniProtKB/Swiss-Prot
	1.20.5.4820	UniProtKB/Swiss-Prot
	1.20.58.530	UniProtKB/Swiss-Prot
	1.25.40.20	UniProtKB/Swiss-Prot
	3.40.850.10	UniProtKB/Swiss-Prot
	Myosin VI head, motor domain, U50 subdomain	UniProtKB/Swiss-Prot
InterPro	Ankyrin_rpt	UniProtKB/Swiss-Prot
	Ankyrin_rpt-contain_sf	UniProtKB/Swiss-Prot
	Kinesin_motor_dom_sf	UniProtKB/Swiss-Prot
	Myosin-XVI	UniProtKB/Swiss-Prot
	Myosin_head_motor_dom	UniProtKB/Swiss-Prot
	MYSc_Myo16	UniProtKB/Swiss-Prot
	NYAP_N	UniProtKB/Swiss-Prot
	P-loop_NTPase	UniProtKB/Swiss-Prot
KEGG Report	rno:192253	UniProtKB/Swiss-Prot
NCBI Gene	192253	ENTREZGENE
PANTHER	UNCONVENTIONAL MYOSIN-XVI	UniProtKB/Swiss-Prot
	UNCONVENTIONAL MYOSIN-XVI	UniProtKB/Swiss-Prot
Pfam	Ank_2	UniProtKB/Swiss-Prot
	Myosin_head	UniProtKB/Swiss-Prot
	NYAP_N	UniProtKB/Swiss-Prot
PhenoGen	Myo16	PhenoGen
PRINTS	MYOSINHEAVY	UniProtKB/Swiss-Prot
PROSITE	ANK_REP_REGION	UniProtKB/Swiss-Prot
	ANK_REPEAT	UniProtKB/Swiss-Prot
	MYOSIN_MOTOR	UniProtKB/Swiss-Prot
	PS50096	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000016483	RatGTEx
SMART	ANK	UniProtKB/Swiss-Prot
	MYSc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF48403	UniProtKB/Swiss-Prot
	SSF52540	UniProtKB/Swiss-Prot
UniProt	A0A8I6ANW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ATL1_RAT	UniProtKB/TrEMBL
	A0ABK0LE01_RAT	UniProtKB/TrEMBL
	A0ABK0LH23_RAT	UniProtKB/TrEMBL
	A6IWR4	ENTREZGENE, UniProtKB/TrEMBL
	MYO16_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q9QXI0	ENTREZGENE
UniProt Secondary	Q9QXI0	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2007-09-11	Myo16	myosin XVI	Myr8	myosin heavy chain Myr 8	Symbol and Name updated to reflect Human and Mouse nomenclature	1299863	APPROVED
2005-01-20	Myr8	myosin heavy chain Myr 8	Loc192253		Symbol updated	1299863	APPROVED
2002-08-07	Loc192253	myosin heavy chain Myr 8			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	head domain contains a large N-terminal extension composed of multiple ankyrin repeats	633234
gene_physical_interaction	associated with the protein phosphatase catalytic subunits 1alpha and 1gamma1; binds to F-actin in an ATP-sensitive manner	633234

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
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InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar