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Gene: Trim9 (tripartite motif-containing 9) Rattus norvegicus

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Symbol:

Trim9

Name:

tripartite motif-containing 9

RGD ID:

621540

Description:

Enables SNARE binding activity. Involved in negative regulation of SNARE complex assembly; negative regulation of dense core granule exocytosis; and synaptic vesicle exocytosis. Located in cytoskeleton and synapse. Is active in presynaptic cytosol and synaptic vesicle. Orthologous to human TRIM9 (tripartite motif containing 9); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bis(2-ethylhexyl) phthalate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

E3 ubiquitin-protein ligase TRIM9; RING-type E3 ubiquitin transferase TRIM9; SNAP-25-interacting RING finger protein; Spring; tripartite motif protein 9; tripartite motif-containing protein 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TRIM9 (tripartite motif containing 9)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther
Mus musculus (house mouse):	Trim9 (tripartite motif-containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Trim9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TRIM9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TRIM9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Trim9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TRIM9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TRIM9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Trim9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Trim9 (tripartite motif containing 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TRIM9 (tripartite motif containing 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Trim9 (tripartite motif-containing 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	trim9 (tripartite motif containing 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Trim9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	madd-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	trim9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	trim9	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl				GRCr8
mRatBN7.2	6	88,756,824 - 88,856,588 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	89,150,974 - 89,250,210 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	89,450,419 - 89,549,648 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	88,889,960 - 88,989,185 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	92,660,026 - 92,760,036 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	92,660,505 - 92,760,018 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	102,107,774 - 102,207,427 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	92,358,509 - 92,457,863 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	87,245,397 - 87,344,755 (-)	NCBI		Celera
RGSC_v3.1	6	92,361,964 - 92,461,319 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-palmitoylglycerol (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

CGP 52608 (ISO)

copper atom (EXP)

copper(0) (EXP)

cyclosporin A (ISO)

dorsomorphin (ISO)

doxorubicin (ISO)

ethanol (ISO)

fenvalerate (EXP)

fonofos (ISO)

FR900359 (ISO)

genistein (EXP)

irinotecan (ISO)

mono(2-ethylhexyl) phthalate (ISO)

N,N-diethyl-m-toluamide (EXP)

nickel atom (ISO)

okadaic acid (ISO)

panobinostat (ISO)

paracetamol (EXP,ISO)

parathion (ISO)

permethrin (EXP)

phenobarbital (ISO)

potassium dichromate (ISO)

resveratrol (ISO)

SB 431542 (ISO)

sotorasib (ISO)

sunitinib (ISO)

terbufos (ISO)

thimerosal (ISO)

titanium dioxide (ISO)

trametinib (ISO)

trichloroethene (EXP)

trichostatin A (ISO)

valproic acid (EXP,ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of calcium ion-dependent exocytosis (IDA,IMP)

negative regulation of dense core granule exocytosis (IDA)

negative regulation of SNARE complex assembly (IDA)

proteasome-mediated ubiquitin-dependent protein catabolic process (ISO,ISS)

protein ubiquitination (IEA)

synaptic vesicle exocytosis (IEP)

Cellular Component

cytoplasm (IBA,IEA,ISO,ISS)

cytoplasmic vesicle (IEA)

cytoskeleton (IDA,IEA)

dendrite (IEA,ISO,ISS)

presynaptic cytosol (IDA,IEP)

synapse (IDA,IEA)

synaptic vesicle (IDA,IEA,IEP,IMP)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

protein homodimerization activity (ISO)

SNARE binding (IPI)

transferase activity (IEA)

ubiquitin protein ligase activity (IEA,ISO,ISS)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	The neural cell recognition molecule neurofascin interacts with syntenin-1 but not with syntenin-2, both of which reveal self-associating activity.	Koroll M, etal., J Biol Chem 2001 Apr 6;276(14):10646-54.
3.	Spring, a novel RING finger protein that regulates synaptic vesicle exocytosis.	Li Y, etal., J Biol Chem 2001 Nov 2;276(44):40824-33.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11331580	PMID:20085810	PMID:22084112	PMID:32357304	PMID:37792226	PMID:38432885

Genomics

Comparative Map Data

Trim9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl				GRCr8
mRatBN7.2	6	88,756,824 - 88,856,588 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	6	89,150,974 - 89,250,210 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	89,450,419 - 89,549,648 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	88,889,960 - 88,989,185 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	92,660,026 - 92,760,036 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	92,660,505 - 92,760,018 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	6	102,107,774 - 102,207,427 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	6	92,358,509 - 92,457,863 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	6	87,245,397 - 87,344,755 (-)	NCBI		Celera
RGSC_v3.1	6	92,361,964 - 92,461,319 (-)	NCBI
Cytogenetic Map	6	q24	NCBI

TRIM9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	50,975,266 - 51,095,105 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	50,975,261 - 51,096,078 (-)	Ensembl			hg38	GRCh38
GRCh37	14	51,441,984 - 51,561,823 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	50,511,729 - 50,631,797 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	14	50,532,535 - 50,631,797	NCBI
Celera	14	31,309,019 - 31,429,455 (-)	NCBI		Celera
Cytogenetic Map	14	q22.1	NCBI
HuRef	14	31,567,844 - 31,722,219 (-)	NCBI		HuRef
CHM1_1	14	51,380,454 - 51,500,911 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	45,181,679 - 45,446,640 (-)	NCBI		T2T-CHM13v2.0

Trim9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	70,291,307 - 70,394,404 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	70,291,307 - 70,394,388 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	12	70,244,533 - 70,347,869 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	70,244,533 - 70,347,614 (-)	Ensembl			mm10	GRCm38
MGSCv37	12	71,345,520 - 71,448,601 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	12	71,166,338 - 71,265,932 (-)	NCBI		MGSCv36	mm8
Celera	12	71,344,221 - 71,453,621 (-)	NCBI		Celera
Cytogenetic Map	12	C2	NCBI
cM Map	12	29.07	NCBI

Trim9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955409	11,837,273 - 11,946,718 (+)	Ensembl
ChiLan1.0	NW_004955409	11,837,717 - 11,946,718 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRIM9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	52,111,942 - 52,378,574 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	51,328,451 - 51,595,083 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	31,577,859 - 31,844,298 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	49,863,424 - 50,129,520 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	49,863,433 - 49,986,212 (-)	Ensembl			panPan2	panpan1.1

TRIM9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	27,334,045 - 27,441,238 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	27,336,063 - 27,441,445 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	27,087,302 - 27,194,539 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	27,513,068 - 27,620,345 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	27,514,169 - 27,620,447 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	27,167,965 - 27,275,165 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	27,241,144 - 27,349,401 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	27,588,063 - 27,696,386 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Trim9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	59,525,669 - 59,628,862 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936495	14,562,553 - 14,664,033 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936495	14,561,765 - 14,666,043 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIM9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	180,723,287 - 180,830,243 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	180,723,281 - 180,830,555 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	201,010,831 - 201,116,480 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIM9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	28,060,365 - 28,202,708 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	28,068,601 - 28,185,269 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666053	16,351,692 - 16,656,165 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trim9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624731	17,851,116 - 17,969,453 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624731	17,851,106 - 17,969,461 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Trim9
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	7	83,924,177 - 84,023,634 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Trim9
624 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	208
Count of miRNA genes:	137
Interacting mature miRNAs:	166
Transcripts:	ENSRNOT00000009560
Prediction methods:	Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293088	Iddm28	Insulin dependent diabetes mellitus QTL 28	5.21		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	6	68767270	135411972	Rat
1331799	Bp211	Blood pressure QTL 211	3.66407		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	6	88019181	136741135	Rat
4889933	Bss88	Bone structure and strength QTL 88	3.8		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	6	53684921	98684921	Rat
61329	Eae9	Experimental allergic encephalomyelitis QTL 9	3.7		body mass (VT:0001259)	change in body weight (CMO:0002045)	6	84490437	129490437	Rat
5684992	Bmd83	Bone mineral density QTL 82	4.8		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	6	53684921	98684921	Rat
1331789	Rf37	Renal function QTL 37	3.224		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	6	86494122	112380234	Rat
4145119	Mcs25	Mammary carcinoma susceptibility QTL 25		0.0001	mammary gland integrity trait (VT:0010552)	ratio of deaths to total study population during a period of time (CMO:0001023)	6	71278722	116278722	Rat
70176	Mcsm1	Mammary carcinoma susceptibility modifier QTL 1			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	64367996	109367996	Rat
1581563	Uae33	Urinary albumin excretion QTL 33			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	93560258	136550638	Rat
10054138	Gmadr3	Adrenal mass QTL 3	3.68	0.00045	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	6	90871046	135871046	Rat
1558641	Cm47	Cardiac mass QTL 47	2.9	0.001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	6	63457441	94939581	Rat
724524	Uae2	Urinary albumin excretion QTL 2	2.7	0.0005	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	6	79198463	144254945	Rat
737827	Hcar11	Hepatocarcinoma resistance QTL 11	4.4		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	6	46050607	116278722	Rat
2303624	Vencon5	Ventilatory control QTL 5	4.45		respiration trait (VT:0001943)	minute ventilation (CMO:0000132)	6	93778632	138778632	Rat
1576309	Emca7	Estrogen-induced mammary cancer QTL 7	4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	6	20859430	113082285	Rat
2293837	Kiddil1	Kidney dilation QTL 1	3.7		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
2293842	Kiddil3	Kidney dilation QTL 3	4.3		kidney pelvis morphology trait (VT:0004194)	hydronephrosis severity score (CMO:0001208)	6	86867923	110125012	Rat
4889848	Pur25	Proteinuria QTL 25	14	0.003	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	63037319	95934232	Rat
10054123	Srcrt6	Stress Responsive Cort QTL 6	2.5	0.0043	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	6	90871046	135871046	Rat
724536	Uae7	Urinary albumin excretion QTL 7	3.5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	6	93560258	136550638	Rat
5684963	Bss99	Bone structure and strength QTL 99	3.1		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	6	53684921	98684921	Rat
1576302	Schws4	Schwannoma susceptibility QTL 4		0.0078	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	6	78204640	123204640	Rat
1581550	Pur8	Proteinuria QTL 8			urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	6	93560258	136550638	Rat
1300075	Glom7	Glomerulus QTL 7	5.6	0.0000002	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	6	76937178	121937178	Rat
6893332	Cm74	Cardiac mass QTL 74	0.4	0.64	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	6	63457441	94939581	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
14	6	30	157	79	78	47	77	47	6	263	133	6	135	63	90	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001434144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_130420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017594007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039111706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063261493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC128557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF350422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000009560 ⟹ ENSRNOP00000009559

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl
Rnor_6.0 Ensembl	6	92,660,505 - 92,760,018 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094403 ⟹ ENSRNOP00000077889

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098553 ⟹ ENSRNOP00000078486

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106074 ⟹ ENSRNOP00000088626

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108750 ⟹ ENSRNOP00000095332

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,514,847 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,778,883 - 88,856,542 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112008 ⟹ ENSRNOP00000093007

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,514,847 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,778,883 - 88,856,542 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000112240 ⟹ ENSRNOP00000086601

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	6	94,493,268 - 94,592,551 (-)	Ensembl
mRatBN7.2 Ensembl	6	88,757,303 - 88,856,542 (-)	Ensembl

RefSeq Acc Id:

NM_130420 ⟹ NP_569104

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,493,268 - 94,592,551 (-)	NCBI
mRatBN7.2	6	88,757,303 - 88,856,542 (-)	NCBI
Rnor_6.0	6	92,660,505 - 92,760,018 (-)	NCBI
Rnor_5.0	6	102,107,774 - 102,207,427 (-)	NCBI
RGSC_v3.4	6	92,358,509 - 92,457,863 (-)	RGD
Celera	6	87,245,397 - 87,344,755 (-)	RGD

Sequence:

show sequence

AGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCCACCACCGCCGCCGCTGG
CCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAGGCCCCCTTTGCCGCAGC
CTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGAAGAGTTAAAATGCCCCG
TGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCACAATTTATGCCAGGCTTG
CGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGAGCCGCCGGGCCTCGGGC
TCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCTTTACAGCGAGGCGGACA
GCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCGTGCCAGAAGTCGCCCAA
CGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACCTGTCACCGGCTTTGGCC
CCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAGCCTCATTCTGGATGACC
GGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATCGACCGCTACCAACAGAG
CAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGGAAGCCACGGTCATGTGC
GAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCACCCACCGAGGGGTCCCC
TAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGACGGCTGAGCCCGCGCAA
GGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACTGTGTGCAATGCAAGATG
CCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGAAGTCAAGGCTTTGGGGG
CTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGATTGTCAGATAGAGCCAA
AGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAATCCAGGAAAACAGTGTG
GAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGCCCTAAACCGAAGGAAGG
CTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAGGTGGTCCGGGACCAGAT
CTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGTACTGCTTGGAAGTGATT
AAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCATCAGACGAGTTCACTTAA
CTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACGGACTTCGACCTGAGCCT
GGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGCAAGTGAAAGCTTCCTCT
CCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCACAACAACAGTGCTACGC
TGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTACATTCTGGAGCTGGATGA
TGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAATGTGCACAGTGGATGGC
CTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAAAACAGGAGTCAGCCCCT
ACAGCAAGACACTGGTCCTCCAGACGTCTGAGGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGC
ACACTCTGACATCATCTTCTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGACCGG
GTGGTGCTGGGGAAAACTGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCT
ATGACAACCACCCTGATCCAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTT
AGGAAAGGACGACAAGGCTTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCACAAC
AACTCGCACACCAACAGAACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCG
ACTTAAACAGAAAGACATTAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGA
GAATGTGGAGGGCCTGTTCTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCAC
ACTGGGCTTCCGGTCCCCGACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGG
AGGCACTGGCTGTCCCTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCC
GGTAGAAGAATGAGAACAGCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCAT
CAGCCTCTCCGCATCGCTGAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGG
AGCTCTGCAGCCCACCGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTG
GGTTTTTGTTGTTGTTTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGAT
TCTTTTCTGATTGTGTTTTGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTCTCCT
GGAAACTTTTTTTCTTAAGCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAA
GCCGAATTTAGAGTTTGCCATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATG
TTAGTTCTTCATGGCTACTTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTAC
TACACCCTAAAGCACAAATACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACA
GGCTCTAGGTACTGGGAAGACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTT
TAATTAAGAACTACTACGGACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGT
CTGTCTTCCTGGAACTTATATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTA
CCAGAAAGGAGAGGAGTCAAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACCCACA
CACTCCAGCCATCACACAGACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAA
GGTCTCTGCTGCCACTCACCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCA
TTAGTGCTGTGCTCAGAACAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGAC
ACAGGACCCAGCCACAACCCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCAGGAT
AAACATGACATCTCCATGTATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGC
TGTCACAGCCTGACTTTCTAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCA
TTCCTAGCATTGACAGAAGACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGAT
GCTTCTGTTTGACACGAAGCTTTAGAGAATGTAGGACCTGG

hide sequence

RefSeq Acc Id:

XM_008764691 ⟹ XP_008762913

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,588 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,035 (-)	NCBI

Sequence:

show sequence

CTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCC
ACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAG
GCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGA
AGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCAC
AATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGA
GCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCT
TTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCG
TGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACC
TGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAG
CCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATC
GACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGG
AAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCA
CCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGA
CGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACT
GTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA
AGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGA
TTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAA
TCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGC
CCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAG
GTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGT
ACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCAT
CAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACG
GACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGC
AAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCA
CAACAACAGTGCTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTAC
ATTCTGGAGCTGGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAA
TGTGCACAGTGGACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAA
AACAGGAGTCAGCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGCAGCGGGAGCCCAT
GAGACAAAACCTATGAAGGACACAGATTCAGAAGAACAGACCCTCCCTTTTCCAGTGCCTTCGG
AAAGATTGCCGCTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTACAACCCAGCTTCCC
CGGGAGATCCTACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTGCATTCTTCTTTACAG
TCTCTCAATGCACCGGGCTGCAATTTTGAGACACAATCTGCATCTTACTCTCAATTAGTTGACA
TTAAAAAGCTGTTGGCAGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGCACACTCTGACATCAT
CTTCTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAA
ACTGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCTATGACAACCACCCTG
ATCCAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTTAGGAAAGGACGACAA
GGCTTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAAC
AGAACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCGACTTAAACAGAAAGA
CATTAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGAGAATGTGGAGGGCCT
GTTCTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCACACTGGGCTTCCGGTC
CCCGACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGGAGGCACTGGCTGTCC
CTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCCGGTAGAAGAATGAGA
ACAGCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCATCAGCCTCTCCGCATC
GCTGAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGGAGCTCTGCAGCCCAC
CGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTGGGTTTTTGTTGTTGT
TTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGATTCTTTTCTGATTGTG
TTTTGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTCTCCTGGAAACTTTTTTTCT
TAAGCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAAGCCGAATTTAGAGTT
TGCCATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATGTTAGTTCTTCATGGC
TACTTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTACTACACCCTAAAGCAC
AAATACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACAGGCTCTAGGTACTGG
GAAGACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTTTAATTAAGAACTACT
ACGGACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGTCTGTCTTCCTGGAAC
TTATATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTACCAGAAAGGAGAGGA
GTCAAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACCCACACACTCCAGCCATCAC
ACAGACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAAGGTCTCTGCTGCCAC
TCACCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCATTAGTGCTGTGCTCA
GAACAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGACACAGGACCCAGCCAC
AACCCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCAGGATAAACATGACATCTCC
ATGTATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGCTGTCACAGCCTGACT
TTCTAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCATTCCTAGCATTGACA
GAAGACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGATGCTTCTGTTTGACAC
GAAGCTTTAGAGAATGTAGGACCTGGGGGCGGGGACTTCTGATTAGTTGTGTAAATACTTTCCA
CTGAGCCAAGAAACCCATCAGTATAACAGTGACCGACAGAGGTGGGGCGGGACAGCCACAGTGC
TTTGGCAAAGAGTAATCTATGTAAATAGCTCATCCTCTGCCCATGTGCTCCCTCTAGATCATCT
CTGTCTTTGTGTTTTTCTAGTTAGAACCTAATTTACTGAATGGGTGCTATCCTGTCTATGTCTG
TCTCGGGTTCCTGTGACTACAGAACACTCTCGTGGGACTATACTCGTTTGATCTTTGATTGTTC
CGATGAGACTCCATGGCTGGGCCGCTAGTTACTCCCTTGATTAAATCCATCCCCCTGGTTAGAG
TTCTAGTGACTTATATCAAATAGTTTACACTGAACTACAACTATAGATGCATATAACTGCTGTA
CTAGGAGAGAAAGGTCATCCTCGGTATGCCAATAAAGCATTTTTATGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_008764692 ⟹ XP_008762914

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,035 (-)	NCBI

Sequence:

show sequence

CTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCC
ACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAG
GCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGA
AGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCAC
AATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGA
GCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCT
TTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCG
TGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACC
TGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAG
CCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATC
GACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGG
AAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCA
CCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGA
CGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACT
GTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA
AGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGA
TTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAA
TCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGC
CCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAG
GTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGT
ACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCAT
CAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACG
GACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGC
AAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCA
CAACAACAGTGCTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTAC
ATTCTGGAGCTGGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAA
TGTGCACAGTGGACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAA
AACAGGAGTCAGCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGCAGCGGGAGCCCAT
GAGACAAAACCTATGAAGGACACAGATTCAGAAGAACAGACCCTCCCTTTTCCAGTGCCTTCGG
AAAGATTGCCGCTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTACAACCCAGCTTCCC
CGGGAGATCCTACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTGCATTCTTCTTTACAG
TCTCTCAATGCACCGGGCTGCAATTTTGAGACACAATCTGCATCTTACTCTCAATTAGTTGACA
TTAAAAAGCTGTTGGCAGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGCACACTCTGACATCAT
CTTCTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAA
ACTGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCTATGACAACCACCCTG
ATCCAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTTAGGAAAGGACGACAA
GGCTTGGGCAATAACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCGACTTA
AACAGAAAGACATTAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGAGAATG
TGGAGGGCCTGTTCTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCACACTGG
GCTTCCGGTCCCCGACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGGAGGCA
CTGGCTGTCCCTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCCGGTAG
AAGAATGAGAACAGCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCATCAGCC
TCTCCGCATCGCTGAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGGAGCTC
TGCAGCCCACCGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTGGGTTT
TTGTTGTTGTTTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGATTCTTT
TCTGATTGTGTTTTGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTCTCCTGGAAA
CTTTTTTTCTTAAGCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAAGCCGA
ATTTAGAGTTTGCCATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATGTTAGT
TCTTCATGGCTACTTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTACTACAC
CCTAAAGCACAAATACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACAGGCTC
TAGGTACTGGGAAGACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTTTAATT
AAGAACTACTACGGACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGTCTGTC
TTCCTGGAACTTATATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTACCAGA
AAGGAGAGGAGTCAAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACCCACACACTC
CAGCCATCACACAGACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAAGGTCT
CTGCTGCCACTCACCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCATTAGT
GCTGTGCTCAGAACAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGACACAGG
ACCCAGCCACAACCCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCAGGATAAACA
TGACATCTCCATGTATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGCTGTCA
CAGCCTGACTTTCTAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCATTCCT
AGCATTGACAGAAGACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGATGCTTC
TGTTTGACACGAAGCTTTAGAGAATGTAGGACCTGGGGGCGGGGACTTCTGATTAGTTGTGTAA
ATACTTTCCACTGAGCCAAGAAACCCATCAGTATAACAGTGACCGACAGAGGTGGGGCGGGACA
GCCACAGTGCTTTGGCAAAGAGTAATCTATGTAAATAGCTCATCCTCTGCCCATGTGCTCCCTC
TAGATCATCTCTGTCTTTGTGTTTTTCTAGTTAGAACCTAATTTACTGAATGGGTGCTATCCTG
TCTATGTCTGTCTCGGGTTCCTGTGACTACAGAACACTCTCGTGGGACTATACTCGTTTGATCT
TTGATTGTTCCGATGAGACTCCATGGCTGGGCCGCTAGTTACTCCCTTGATTAAATCCATCCCC
CTGGTTAGAGTTCTAGTGACTTATATCAAATAGTTTACACTGAACTACAACTATAGATGCATAT
AACTGCTGTACTAGGAGAGAAAGGTCATCCTCGGTATGCCAATAAAGCATTTTTATGAGAGGAA
AAA

hide sequence

RefSeq Acc Id:

XM_008764693 ⟹ XP_008762915

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,035 (-)	NCBI

Sequence:

show sequence

CTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCC
ACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAG
GCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGA
AGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCAC
AATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGA
GCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCT
TTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCG
TGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACC
TGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAG
CCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATC
GACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGG
AAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCA
CCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGA
CGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACT
GTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA
AGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGA
TTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAA
TCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGC
CCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAG
GTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGT
ACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCAT
CAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACG
GACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGC
AAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCA
CAACAACAGTGCTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTAC
ATTCTGGAGCTGGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAA
TGTGCACAGTGGACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAA
AACAGGAGTCAGCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGCGGGAGCCCATGAG
ACAAAACCTATGAAGGACACAGATTCAGAAGAACAGACCCTCCCTTTTCCAGTGCCTTCGGAAA
GATTGCCGCTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTACAACCCAGCTTCCCCGG
GAGATCCTACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTGCATTCTTCTTTACAGTCT
CTCAATGCACCGGGCTGCAATTTTGAGACACAATCTGCATCTTACTCTCAATTAGTTGACATTA
AAAAGCTGTTGGCAGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGCACACTCTGACATCATCTT
CTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAAACT
GGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCTATGACAACCACCCTGATC
CAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTTAGGAAAGGACGACAAGGC
TTGGGCAATAACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCGACTTAAAC
AGAAAGACATTAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGAGAATGTGG
AGGGCCTGTTCTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCACACTGGGCT
TCCGGTCCCCGACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGGAGGCACTG
GCTGTCCCTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCCGGTAGAAG
AATGAGAACAGCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCATCAGCCTCT
CCGCATCGCTGAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGGAGCTCTGC
AGCCCACCGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTGGGTTTTTG
TTGTTGTTTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGATTCTTTTCT
GATTGTGTTTTGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTCTCCTGGAAACTT
TTTTTCTTAAGCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAAGCCGAATT
TAGAGTTTGCCATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATGTTAGTTCT
TCATGGCTACTTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTACTACACCCT
AAAGCACAAATACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACAGGCTCTAG
GTACTGGGAAGACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTTTAATTAAG
AACTACTACGGACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGTCTGTCTTC
CTGGAACTTATATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTACCAGAAAG
GAGAGGAGTCAAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACCCACACACTCCAG
CCATCACACAGACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAAGGTCTCTG
CTGCCACTCACCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCATTAGTGCT
GTGCTCAGAACAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGACACAGGACC
CAGCCACAACCCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCAGGATAAACATGA
CATCTCCATGTATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGCTGTCACAG
CCTGACTTTCTAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCATTCCTAGC
ATTGACAGAAGACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGATGCTTCTGT
TTGACACGAAGCTTTAGAGAATGTAGGACCTGGGGGCGGGGACTTCTGATTAGTTGTGTAAATA
CTTTCCACTGAGCCAAGAAACCCATCAGTATAACAGTGACCGACAGAGGTGGGGCGGGACAGCC
ACAGTGCTTTGGCAAAGAGTAATCTATGTAAATAGCTCATCCTCTGCCCATGTGCTCCCTCTAG
ATCATCTCTGTCTTTGTGTTTTTCTAGTTAGAACCTAATTTACTGAATGGGTGCTATCCTGTCT
ATGTCTGTCTCGGGTTCCTGTGACTACAGAACACTCTCGTGGGACTATACTCGTTTGATCTTTG
ATTGTTCCGATGAGACTCCATGGCTGGGCCGCTAGTTACTCCCTTGATTAAATCCATCCCCCTG
GTTAGAGTTCTAGTGACTTATATCAAATAGTTTACACTGAACTACAACTATAGATGCATATAAC
TGCTGTACTAGGAGAGAAAGGTCATCCTCGGTATGCCAATAAAGCATTTTTATGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_008764694 ⟹ XP_008762916

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,578 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,034 (-)	NCBI

Sequence:

show sequence

TCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCCA
CCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAGG
CCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGAA
GAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCACA
ATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGAG
CCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCTT
TACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCGT
GCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACCT
GTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAGC
CTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATCG
ACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGGA
AGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCAC
CCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGAC
GGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACTG
TGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGAA
GTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGAT
TGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAAT
CCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGCC
CTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAGG
TGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGTA
CTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCATC
AGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACGG
ACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGCA
AGTGAAAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCACAACAACAGTGCT
ACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTACATTCTGGAGCTGG
ATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAATGTGCACAGTGGA
CGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAAAACAGGAGTCAGC
CCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGTGGCGTGGTTTGCGTTTGACCCCGGCT
CGGCACACTCTGACATCATCTTCTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGA
CCGGGTGGTGCTGGGGAAAACTGGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGAT
CGCTATGACAACCACCCTGATCCAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGA
TGTTAGGAAAGGACGACAAGGCTTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCA
CAACAACTCGCACACCAACAGAACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTC
CTCGACTTAAACAGAAAGACATTAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCT
TTGAGAATGTGGAGGGCCTGTTCTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCT
TCACACTGGGCTTCCGGTCCCCGACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCT
GTGGAGGCACTGGCTGTCCCTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAG
AGCCGGTAGAAGAATGAGAACAGCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTC
CCATCAGCCTCTCCGCATCGCTGAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCA
GAGGAGCTCTGCAGCCCACCGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTT
AGTGGGTTTTTGTTGTTGTTTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTT
TGATTCTTTTCTGATTGTGTTTTGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTC
TCCTGGAAACTTTTTTTCTTAAGCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAA
AGAAGCCGAATTTAGAGTTTGCCATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGC
AATGTTAGTTCTTCATGGCTACTTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTC
TTACTACACCCTAAAGCACAAATACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCA
GACAGGCTCTAGGTACTGGGAAGACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAG
TTTTTAATTAAGAACTACTACGGACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAA
CAGTCTGTCTTCCTGGAACTTATATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTA
AGTACCAGAAAGGAGAGGAGTCAAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACC
CACACACTCCAGCCATCACACAGACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAA
CTAAGGTCTCTGCTGCCACTCACCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTA
CTCATTAGTGCTGTGCTCAGAACAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGA
GGACACAGGACCCAGCCACAACCCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCA
GGATAAACATGACATCTCCATGTATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCA
CCGCTGTCACAGCCTGACTTTCTAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGAC
ATCATTCCTAGCATTGACAGAAGACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTC
AGATGCTTCTGTTTGACACGAAGCTTTAGAGAATGTAGGACCTGGGGGCGGGGACTTCTGATTA
GTTGTGTAAATACTTTCCACTGAGCCAAGAAACCCATCAGTATAACAGTGACCGACAGAGGTGG
GGCGGGACAGCCACAGTGCTTTGGCAAAGAGTAATCTATGTAAATAGCTCATCCTCTGCCCATG
TGCTCCCTCTAGATCATCTCTGTCTTTGTGTTTTTCTAGTTAGAACCTAATTTACTGAATGGGT
GCTATCCTGTCTATGTCTGTCTCGGGTTCCTGTGACTACAGAACACTCTCGTGGGACTATACTC
GTTTGATCTTTGATTGTTCCGATGAGACTCCATGGCTGGGCCGCTAGTTACTCCCTTGATTAAA
TCCATCCCCCTGGTTAGAGTTCTAGTGACTTATATCAAATAGTTTACACTGAACTACAACTATA
GATGCATATAACTGCTGTACTAGGAGAGAAAGGTCATCCTCGGTATGCCAATAAAGCATTTTTA
TGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_017593996 ⟹ XP_017449485

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,035 (-)	NCBI

Sequence:

show sequence

CTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCC
ACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAG
GCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGA
AGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCAC
AATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGA
GCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCT
TTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCG
TGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACC
TGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAG
CCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATC
GACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGG
AAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCA
CCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGA
CGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACT
GTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA
AGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGA
TTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAA
TCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGC
CCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAG
GTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGT
ACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCAT
CAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACG
GACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGC
AAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCA
CAACAACAGTGCTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTAC
ATTCTGGAGCTGGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAA
TGTGCACAGTGGACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAA
AACAGGAGTCAGCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGCGGGAGCCCATGAG
ACAAAACCTATGAAGGACACAGATTCAGAAGAACAGACCCTCCCTTTTCCAGTGCCTTCGGAAA
GATTGCCGCTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTACAACCCAGCTTCCCCGG
GAGATCCTACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTGCATTCTTCTTTACAGTCT
CTCAATGCACCGGGCTGCAATTTTGAGACACAATCTGCATCTTACTCTCAATTAGTTGACATTA
AAAAGCTGTTGGCAGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGCACACTCTGACATCATCTT
CTCCAATGACAACCTGACAGTGACATGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAAACT
GGCTTCTCCAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCTATGACAACCACCCTGATC
CAGCATTTGGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTTAGGAAAGGACGACAAGGC
TTGGGCAATGTATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGA
ACTGAAGGAGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCGACTTAAACAGAAAGACAT
TAACGTTTTTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGAGAATGTGGAGGGCCTGTT
CTTTCCTGCCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCACACTGGGCTTCCGGTCCCC
GACTTCTACTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGGAGGCACTGGCTGTCCCTG
AGAAGGACAGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCCGGTAGAAGAATGAGAACA
GCTGGTCCTCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCATCAGCCTCTCCGCATCGCT
GAACCCAGGCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGGAGCTCTGCAGCCCACCGC
TCCCGTGTGTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTGGGTTTTTGTTGTTGTTTG
CTTGTTTGTTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGATTCTTTTCTGATTGTGTTT
TGGTGACTTACGTACACTACCTGGCACTGTCAAAAGACATTCTCCTGGAAACTTTTTTTCTTAA
GCGTTTGGACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAAGCCGAATTTAGAGTTTGC
CATTTGACTCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATGTTAGTTCTTCATGGCTAC
TTCTTGGGAGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTACTACACCCTAAAGCACAAA
TACATCATCTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACAGGCTCTAGGTACTGGGAA
GACCAGGTGGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTTTAATTAAGAACTACTACG
GACCAGGCACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGTCTGTCTTCCTGGAACTTA
TATTCTATGTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTACCAGAAAGGAGAGGAGTC
AAAGGAGGTGTCACTGACAAACCCTCAGACTGACGCTGAACCCACACACTCCAGCCATCACACA
GACATGTACCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAAGGTCTCTGCTGCCACTCA
CCGCAGAGCCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCATTAGTGCTGTGCTCAGAA
CAAGCCTTAAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGACACAGGACCCAGCCACAAC
CCTGGGCCTCCCGAGTTGCAAACCACAACATTTACATCCTCAGGATAAACATGACATCTCCATG
TATACTCTCTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGCTGTCACAGCCTGACTTTC
TAAAGAAGCTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCATTCCTAGCATTGACAGAA
GACTAACCAGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGATGCTTCTGTTTGACACGAA
GCTTTAGAGAATGTAGGACCTGGGGGCGGGGACTTCTGATTAGTTGTGTAAATACTTTCCACTG
AGCCAAGAAACCCATCAGTATAACAGTGACCGACAGAGGTGGGGCGGGACAGCCACAGTGCTTT
GGCAAAGAGTAATCTATGTAAATAGCTCATCCTCTGCCCATGTGCTCCCTCTAGATCATCTCTG
TCTTTGTGTTTTTCTAGTTAGAACCTAATTTACTGAATGGGTGCTATCCTGTCTATGTCTGTCT
CGGGTTCCTGTGACTACAGAACACTCTCGTGGGACTATACTCGTTTGATCTTTGATTGTTCCGA
TGAGACTCCATGGCTGGGCCGCTAGTTACTCCCTTGATTAAATCCATCCCCCTGGTTAGAGTTC
TAGTGACTTATATCAAATAGTTTACACTGAACTACAACTATAGATGCATATAACTGCTGTACTA
GGAGAGAAAGGTCATCCTCGGTATGCCAATAAAGCATTTTTATGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_017593998 ⟹ XP_017449487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,578 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,036 (-)	NCBI

Sequence:

show sequence

GCTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGC
CACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCA
GGCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAG
AAGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCA
CAATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAG
AGCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCC
TTTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCC
GTGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCAC
CTGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCA
GCCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCAT
CGACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAG
GAAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCC
ACCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCG
ACGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTAC
TGTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACG
AAGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGG
ATTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAA
ATCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATG
CCCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAA
GGTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAG
TACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCA
TCAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCAC
GGACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTG
CAAGTGAAAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCACAACAACAGTG
CTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTACATTCTGGAGCT
GGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAATGTGCACAGTG
GACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAAAACAGGAGTCA
GCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGCAGCGGGAGCCCATGAGACAAAACC
TATGAAGGACACAGATTCAGAAGAACAGACCCTCCCTTTTCCAGTGCCTTCGGAAAGATTGCCG
CTCCGTAGAATGAGTCCTTTCTCCTCCACCCTTAATCTACAACCCAGCTTCCCCGGGAGATCCT
ACTTTGATTTCCGGTCCTCACCCCACCAGCTGAGCTTGCATTCTTCTTTACAGTCTCTCAATGC
ACCGGGCTGCAATTTTGAGACACAATCTGCATCTTACTCTCAATTAGTTGACATTAAAAAGCTG
TTGGCAGTGGCGTGGTTTGCGTTTGACCCCGGCTCGGCACACTCTGACATCATCTTCTCCAATG
ACAACCTGACAGTGACATGCAGTAGCTACGATGACCGGGTGGTGCTGGGGAAAACTGGCTTCTC
CAAGGGCGTCCACTACTGGGAGCTGACCATAGATCGCTATGACAACCACCCTGATCCAGCATTT
GGCGTGGCTCGCATCGATGTGATGAAGGATATGATGTTAGGAAAGGACGACAAGGCTTGGGCAA
TGTATGTGGACAATAACCGGAGCTGGTTCATGCACAACAACTCGCACACCAACAGAACTGAAGG
AGGGATCACAAAAGGGGCCACTATCGGGGTCCTCCTCGACTTAAACAGAAAGACATTAACGTTT
TTCGTCAACAATGAACAGCAAGGCCCCATAGCCTTTGAGAATGTGGAGGGCCTGTTCTTTCCTG
CCGTCAGCCTGAACAGGAATGTACAGGTCACGCTTCACACTGGGCTTCCGGTCCCCGACTTCTA
CTCCAGCAGAGCTTCCATAGCCTAAGGGTGAGCTGTGGAGGCACTGGCTGTCCCTGAGAAGGAC
AGCCCAGAGCCTGCAGCCTCAGCAGAGGACACAGAGCCGGTAGAAGAATGAGAACAGCTGGTCC
TCAGCAATCTCCACCTTTAGAGCTCCACCCTTTCCCATCAGCCTCTCCGCATCGCTGAACCCAG
GCTCCCTTCCTCACCCAGAAACTCTACCCGCGCAGAGGAGCTCTGCAGCCCACCGCTCCCGTGT
GTTCCCACTTCCGTGTGTTCTTTTTCTTTAATTTAGTGGGTTTTTGTTGTTGTTTGCTTGTTTG
TTTGTTTTTGTTTTAATGTAGGTTGAATTCATTTTGATTCTTTTCTGATTGTGTTTTGGTGACT
TACGTACACTACCTGGCACTGTCAAAAGACATTCTCCTGGAAACTTTTTTTCTTAAGCGTTTGG
ACAAACAAAGGTGTTCTAGGAGAGCAGGTAGGAAAGAAGCCGAATTTAGAGTTTGCCATTTGAC
TCCTAGAATGTTCTTGCCCTGGTTCTTGTCAAGCAATGTTAGTTCTTCATGGCTACTTCTTGGG
AGGTGGGCAGAAGTGCATTTGGCATCCAGAAGTCTTACTACACCCTAAAGCACAAATACATCAT
CTACACTGGCTCATGGCAGGGTAAGGACCTTCCAGACAGGCTCTAGGTACTGGGAAGACCAGGT
GGCCCAATGGTTTGATTCATTTGACTAATACAAGTTTTTAATTAAGAACTACTACGGACCAGGC
ACTGTTCAAGACACTAGAATGCTGTGTTCATGAACAGTCTGTCTTCCTGGAACTTATATTCTAT
GTAACAAAGCAACAAATAACGTCAAGTTGTTCTAAGTACCAGAAAGGAGAGGAGTCAAAGGAGG
TGTCACTGACAAACCCTCAGACTGACGCTGAACCCACACACTCCAGCCATCACACAGACATGTA
CCAACCCAGTGCTTTTCCCACCGCACTACCGTAACTAAGGTCTCTGCTGCCACTCACCGCAGAG
CCCGTCTTCGGCAGAAATGATGTCACCATTGTTACTCATTAGTGCTGTGCTCAGAACAAGCCTT
AAAAGCCAGAATGTTAAAAAACAACATGACCAGAGGACACAGGACCCAGCCACAACCCTGGGCC
TCCCGAGTTGCAAACCACAACATTTACATCCTCAGGATAAACATGACATCTCCATGTATACTCT
CTGTGCCTGTTGCAAATGAGACTCCATCCGCTCACCGCTGTCACAGCCTGACTTTCTAAAGAAG
CTCAAATCGGGTTTGGAACAGCGTAAGTGTGGACATCATTCCTAGCATTGACAGAAGACTAACC
AGGCTTACGACTCTTAACGGAGTAGATACCCTTCAGATGCTTCTGTTTGACACGAAGCTTTAGA
GAATGTAGGACCTGGGGGCGGGGACTTCTGATTAGTTGTGTAAATACTTTCCACTGAGCCAAGA
AACCCATCAGTATAACAGTGACCGACAGAGGTGGGGCGGGACAGCCACAGTGCTTTGGCAAAGA
GTAATCTATGTAAATAGCTCATCCTCTGCCCATGTGCTCCCTCTAGATCATCTCTGTCTTTGTG
TTTTTCTAGTTAGAACCTAATTTACTGAATGGGTGCTATCCTGTCTATGTCTGTCTCGGGTTCC
TGTGACTACAGAACACTCTCGTGGGACTATACTCGTTTGATCTTTGATTGTTCCGATGAGACTC
CATGGCTGGGCCGCTAGTTACTCCCTTGATTAAATCCATCCCCCTGGTTAGAGTTCTAGTGACT
TATATCAAATAGTTTACACTGAACTACAACTATAGATGCATATAACTGCTGTACTAGGAGAGAA
AGGTCATCCTCGGTATGCCAATAAAGCATTTTTATGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_017593999 ⟹ XP_017449488

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI
Rnor_6.0	6	92,660,026 - 92,760,035 (-)	NCBI

Sequence:

show sequence

CTCCACCGCTCACAGAGAGAGCGCGTCCTGGGGAGTCGGCGCCTAGGCGACGCGGAAAGGCGCC
ACCACCGCCGCCGCTGGCCAAGGTGCTGGACACCACAGGCCTATCGACTGCTTCGCCAGGTCAG
GCCCCCTTTGCCGCAGCCTCTGCTGCCTCGCTTCCAGCCAGGTCCCCATGGAAGAGATGGAAGA
AGAGTTAAAATGCCCCGTGTGTGGCTCCTTCTATCGGGAGCCCATCATCCTGCCCTGCTCTCAC
AATTTATGCCAGGCTTGCGCCCGCAACATCCTGGTGCAGACCCCGGAGTCCGAGTCCCCCCAGA
GCCGCCGGGCCTCGGGCTCTGGGGTTTCTGACTATGACTATCTGGACCTGGACAAGATGAGCCT
TTACAGCGAGGCGGACAGCGGCTATGGCTCCTACGGAGGTTTCGCCAGCGCCCCCACTACCCCG
TGCCAGAAGTCGCCCAACGGCGTCCGTGTTTTCCCCCCTGCTATGCCGCCACCGCCCACCCACC
TGTCACCGGCTTTGGCCCCTGTGCCCCGCAACTCCTGCATTACCTGCCCCCAGTGCCACCGCAG
CCTCATTCTGGATGACCGGGGGCTCCGCGGCTTCCCCAAGAACCGCGTCCTGGAAGGGGTCATC
GACCGCTACCAACAGAGCAAAGCCGCGGCCCTCAAGTGCCAGCTCTGTGAGAAGGCGCCCAAGG
AAGCCACGGTCATGTGCGAACAGTGCGATGTCTTCTACTGCGACCCTTGCCGTCTACGCTGCCA
CCCACCGAGGGGTCCCCTAGCCAAACACCGTCTGGTGCCCCCGGCCCAGGGTCGCGTAAGCCGA
CGGCTGAGCCCGCGCAAGGTCTCCACCTGCACAGACCACGAGCTGGAGAACCACAGCATGTACT
GTGTGCAATGCAAGATGCCGGTGTGCTACCAGTGCTTGGAGGAGGGCAAACACTCCAGCCACGA
AGTCAAGGCTTTGGGGGCTATGTGGAAATTGCACAAGAGCCAGCTTTCCCAGGCGCTGAATGGA
TTGTCAGATAGAGCCAAAGAAGCCAAGGAGTTCCTGGTGCAACTCCGCACCATGGTGCAACAAA
TCCAGGAAAACAGTGTGGAGTTTGAAGCCTGCCTGGTGGCTCAGTGCGATGCTCTCATTGATGC
CCTAAACCGAAGGAAGGCTCAGCTGCTGGCCCGGGTCAACAAGGAACATGAGCACAAGCTGAAG
GTGGTCCGGGACCAGATCTCTCATTGCACAGTGAAACTGCGCCAGACCACGGGCCTCATGGAGT
ACTGCTTGGAAGTGATTAAGGAGAACGACCCCAGTGGCTTCCTGCAGATTTCAGATGCCCTCAT
CAGACGAGTTCACTTAACTGAGGACCAGTGGGGAAAAGGCACACTCACTCCCAGGATGACCACG
GACTTCGACCTGAGCCTGGACAACAGTCCTCTGCTACAGTCCATCCACCAGCTGGACTTCGTGC
AAGTGAAAGCTTCCTCTCCAGTCCCAGCAACCCCCATCCTCCAGCTGGAGGAGTGTTGCACCCA
CAACAACAGTGCTACGCTGTCCTGGAAACAGCCCCCTCTGTCCACTGTGGCCGCCGATGGCTAC
ATTCTGGAGCTGGATGATGGCAGTGGTGGTCAGTTCCGGGAAGTGTATGTTGGAAAAGAAACAA
TGTGCACAGTGGACGGCCTTCACTTCAACAGCACATACAACGCCCGCGTTAAGGCCTTCAACAA
AACAGGAGTCAGCCCCTACAGCAAGACACTGGTCCTCCAGACGTCTGAGGACACAGATTCAGAA
GAACAGACCCTCCCTTTTCCAGTGCCTTCGGAAAGATTGCCGCTCCGTAGAATGAGTCCTTTCT
CCTCCACCCTTAATCTACAACCCAGCTTCCCCGGGAGATCCTACTTTGATTTCCGGTCCTCACC
CCACCAGCTGAGCTTGCATTCTTCTTTACAGTCTCTCAATGCACCGGGCTGCAATTTTGAGACA
CAATCTGCATCTTACTCTCAATTAGTTGACATTAAAAAGCTGTTGGCAGTGGCGTGGTTTGCGT
TTGACCCCGGCTCGGCACACTCTGACATCATCTTCTCCAATGACAACCTGACAGTGACATGCAG
TAGCTACGATGACCGGGTGGTGCTGGGGAAAACTGGCTTCTCCAAGGGCGTCCACTACTGGGAG
CTGACCATAGATCGCTATGACAACCACCCTGATCCAGCATTTGGCGTGGCTCGCATCGATGTGA
TGAAGGATATGATGTTAGGAAAGGACGACAAGGCTTGGGCAATGTATGTGGACAATAACCGGAG
CTGGTTCATGCACAACAACTCGCACACCAACAGAACTGAAGGAGGGATCACAAAAGGGGCCACT
ATCGGGGTCCTCCTCGACTTAAACAGAAAGACATTAACGTTTTTCGTCAACAATGAACAGCAAG
GCCCCATAGCCTTTGAGAATGTGGAGGGCCTGTTCTTTCCTGCCGTCAGCCTGAACAGGAATGT
ACAGGTCACGCTTCACACTGGGCTTCCGGTCCCCGACTTCTACTCCAGCAGAGCTTCCATAGCC
TAAGGGTGAGCTGTGGAGGCACTGGCTGTCCCTGAGAAGGACAGCCCAGAGCCTGCAGCCTCAG
CAGAGGACACAGAGCCGGTAGAAGAATGAGAACAGCTGGTCCTCAGCAATCTCCACCTTTAGAG
CTCCACCCTTTCCCATCAGCCTCTCCGCATCGCTGAACCCAGGCTCCCTTCCTCACCCAGAAAC
TCTACCCGCGCAGAGGAGCTCTGCAGCCCACCGCTCCCGTGTGTTCCCACTTCCGTGTGTTCTT
TTTCTTTAATTTAGTGGGTTTTTGTTGTTGTTTGCTTGTTTGTTTGTTTTTGTTTTAATGTAGG
TTGAATTCATTTTGATTCTTTTCTGATTGTGTTTTGGTGACTTACGTACACTACCTGGCACTGT
CAAAAGACATTCTCCTGGAAACTTTTTTTCTTAAGCGTTTGGACAAACAAAGGTGTTCTAGGAG
AGCAGGTAGGAAAGAAGCCGAATTTAGAGTTTGCCATTTGACTCCTAGAATGTTCTTGCCCTGG
TTCTTGTCAAGCAATGTTAGTTCTTCATGGCTACTTCTTGGGAGGTGGGCAGAAGTGCATTTGG
CATCCAGAAGTCTTACTACACCCTAAAGCACAAATACATCATCTACACTGGCTCATGGCAGGGT
AAGGACCTTCCAGACAGGCTCTAGGTACTGGGAAGACCAGGTGGCCCAATGGTTTGATTCATTT
GACTAATACAAGTTTTTAATTAAGAACTACTACGGACCAGGCACTGTTCAAGACACTAGAATGC
TGTGTTCATGAACAGTCTGTCTTCCTGGAACTTATATTCTATGTAACAAAGCAACAAATAACGT
CAAGTTGTTCTAAGTACCAGAAAGGAGAGGAGTCAAAGGAGGTGTCACTGACAAACCCTCAGAC
TGACGCTGAACCCACACACTCCAGCCATCACACAGACATGTACCAACCCAGTGCTTTTCCCACC
GCACTACCGTAACTAAGGTCTCTGCTGCCACTCACCGCAGAGCCCGTCTTCGGCAGAAATGATG
TCACCATTGTTACTCATTAGTGCTGTGCTCAGAACAAGCCTTAAAAGCCAGAATGTTAAAAAAC
AACATGACCAGAGGACACAGGACCCAGCCACAACCCTGGGCCTCCCGAGTTGCAAACCACAACA
TTTACATCCTCAGGATAAACATGACATCTCCATGTATACTCTCTGTGCCTGTTGCAAATGAGAC
TCCATCCGCTCACCGCTGTCACAGCCTGACTTTCTAAAGAAGCTCAAATCGGGTTTGGAACAGC
GTAAGTGTGGACATCATTCCTAGCATTGACAGAAGACTAACCAGGCTTACGACTCTTAACGGAG
TAGATACCCTTCAGATGCTTCTGTTTGACACGAAGCTTTAGAGAATGTAGGACCTGGGGGCGGG
GACTTCTGATTAGTTGTGTAAATACTTTCCACTGAGCCAAGAAACCCATCAGTATAACAGTGAC
CGACAGAGGTGGGGCGGGACAGCCACAGTGCTTTGGCAAAGAGTAATCTATGTAAATAGCTCAT
CCTCTGCCCATGTGCTCCCTCTAGATCATCTCTGTCTTTGTGTTTTTCTAGTTAGAACCTAATT
TACTGAATGGGTGCTATCCTGTCTATGTCTGTCTCGGGTTCCTGTGACTACAGAACACTCTCGT
GGGACTATACTCGTTTGATCTTTGATTGTTCCGATGAGACTCCATGGCTGGGCCGCTAGTTACT
CCCTTGATTAAATCCATCCCCCTGGTTAGAGTTCTAGTGACTTATATCAAATAGTTTACACTGA
ACTACAACTATAGATGCATATAACTGCTGTACTAGGAGAGAAAGGTCATCCTCGGTATGCCAAT
AAAGCATTTTTATGAGAGGAAAAA

hide sequence

RefSeq Acc Id:

XM_039111704 ⟹ XP_038967632

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,578 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI

RefSeq Acc Id:

XM_039111705 ⟹ XP_038967633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI

RefSeq Acc Id:

XM_039111706 ⟹ XP_038967634

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,597 (-)	NCBI
mRatBN7.2	6	88,756,824 - 88,856,384 (-)	NCBI

RefSeq Acc Id:

XM_063261493 ⟹ XP_063117563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	6	94,492,789 - 94,592,578 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001421073	(Get FASTA)	NCBI Sequence Viewer
	NP_001421074	(Get FASTA)	NCBI Sequence Viewer
	NP_001421075	(Get FASTA)	NCBI Sequence Viewer
	NP_001421076	(Get FASTA)	NCBI Sequence Viewer
	NP_001421077	(Get FASTA)	NCBI Sequence Viewer
	NP_001421078	(Get FASTA)	NCBI Sequence Viewer
	NP_001421079	(Get FASTA)	NCBI Sequence Viewer
	NP_569104	(Get FASTA)	NCBI Sequence Viewer
	XP_008762913	(Get FASTA)	NCBI Sequence Viewer
	XP_008762914	(Get FASTA)	NCBI Sequence Viewer
	XP_008762915	(Get FASTA)	NCBI Sequence Viewer
	XP_008762916	(Get FASTA)	NCBI Sequence Viewer
	XP_017449485	(Get FASTA)	NCBI Sequence Viewer
	XP_017449487	(Get FASTA)	NCBI Sequence Viewer
	XP_017449488	(Get FASTA)	NCBI Sequence Viewer
	XP_038967632	(Get FASTA)	NCBI Sequence Viewer
	XP_038967633	(Get FASTA)	NCBI Sequence Viewer
	XP_038967634	(Get FASTA)	NCBI Sequence Viewer
	XP_063117563	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAL27988	(Get FASTA)	NCBI Sequence Viewer
	EDM03547	(Get FASTA)	NCBI Sequence Viewer
	EDM03548	(Get FASTA)	NCBI Sequence Viewer
	EDM03549	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000009559
	ENSRNOP00000009559.1
	ENSRNOP00000077889
	ENSRNOP00000086601
	ENSRNOP00000088626
GenBank Protein	Q91ZY8	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_569104 ⟸ NM_130420

- UniProtKB:

Q91ZY8 (UniProtKB/Swiss-Prot), A6HBZ2 (UniProtKB/TrEMBL), A0A8I5ZL10 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSK
GVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGG
ITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAVSLNRNVQVTLHTGLPVPDFYS
SRASIA

hide sequence

RefSeq Acc Id:

XP_008762916 ⟸ XM_008764694

- Peptide Label:

isoform X9

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVPATPILQLEECC
THNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAF
NKTGVSPYSKTLVLQTSEVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHY
WELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKG
ATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRAS
IA

hide sequence

RefSeq Acc Id:

XP_008762915 ⟸ XM_008764693

- Peptide Label:

isoform X7

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNL
QPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSA
HSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMML
GKDDKAWAITEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAVSLNRNVQV
TLHTGLPVPDFYSSRASIA

hide sequence

RefSeq Acc Id:

XP_008762914 ⟸ XM_008764692

- Peptide Label:

isoform X6

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLN
LQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGS
AHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMM
LGKDDKAWAITEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAVSLNRNVQ
VTLHTGLPVPDFYSSRASIA

hide sequence

RefSeq Acc Id:

XP_008762913 ⟸ XM_008764691

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLN
LQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGS
AHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMM
LGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAF
ENVEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA

hide sequence

RefSeq Acc Id:	XP_017449487 ⟸ XM_017593998
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZL10 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKVPATPILQLEECC THNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAF NKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPS FPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSD IIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKD DKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVE GLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA hide sequence

RefSeq Acc Id:

XP_017449488 ⟸ XM_017593999

- Peptide Label:

isoform X4

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYF
DFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDN
LTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMY
VDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENVEGLFFPAV
SLNRNVQVTLHTGLPVPDFYSSRASIA

hide sequence

RefSeq Acc Id:

XP_017449485 ⟸ XM_017593996

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLD
LDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITC
PQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDP
CRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEG
KHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQC
DALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQ
ISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQL
EECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNAR
VKAFNKTGVSPYSKTLVLQTSEAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNL
QPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSA
HSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMML
GKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFE
NVEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA

hide sequence

Ensembl Acc Id:

ENSRNOP00000009559 ⟸ ENSRNOT00000009560

RefSeq Acc Id:	XP_038967632 ⟸ XM_039111704
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZL10 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038967634 ⟸ XM_039111706
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_038967633 ⟸ XM_039111705
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5XWL7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000086601 ⟸ ENSRNOT00000112240

Ensembl Acc Id:

ENSRNOP00000077889 ⟸ ENSRNOT00000094403

Ensembl Acc Id:

ENSRNOP00000093007 ⟸ ENSRNOT00000112008

Ensembl Acc Id:

ENSRNOP00000095332 ⟸ ENSRNOT00000108750

Ensembl Acc Id:

ENSRNOP00000088626 ⟸ ENSRNOT00000106074

Ensembl Acc Id:

ENSRNOP00000078486 ⟸ ENSRNOT00000098553

RefSeq Acc Id:	XP_063117563 ⟸ XM_063261493
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I5XWL7 (UniProtKB/TrEMBL)

Protein Domains

B box-type B30.2/SPRY COS Fibronectin type-III RING-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q91ZY8-F1-model_v2	AlphaFold	Q91ZY8	1-710	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621540	AgrOrtholog
BioCyc Gene	G2FUF-37213	BioCyc
Ensembl Genes	ENSRNOG00000007031	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000009560	ENTREZGENE
	ENSRNOT00000009560.3	UniProtKB/Swiss-Prot
	ENSRNOT00000094403	ENTREZGENE
	ENSRNOT00000106074	ENTREZGENE
	ENSRNOT00000112240	ENTREZGENE
Gene3D-CATH	1.20.5.170	UniProtKB/Swiss-Prot
	2.60.120.920	UniProtKB/Swiss-Prot
	2.60.40.10	UniProtKB/Swiss-Prot
	3.30.40.10	UniProtKB/Swiss-Prot
	4.10.830.40	UniProtKB/Swiss-Prot
	Classic Zinc Finger	UniProtKB/Swiss-Prot
InterPro	B30.2/SPRY	UniProtKB/Swiss-Prot
	B30.2/SPRY_sf	UniProtKB/Swiss-Prot
	Bbox_C	UniProtKB/Swiss-Prot
	ConA-like_dom_sf	UniProtKB/Swiss-Prot
	COS_domain	UniProtKB/Swiss-Prot
	E3_ligase_FN3/SPRY	UniProtKB/Swiss-Prot
	FN3_dom	UniProtKB/Swiss-Prot
	FN3_sf	UniProtKB/Swiss-Prot
	Ig-like_fold	UniProtKB/Swiss-Prot
	SPRY_dom	UniProtKB/Swiss-Prot
	TRIM9_Bbox1	UniProtKB/Swiss-Prot
	Znf-RING_LisH	UniProtKB/Swiss-Prot
	Znf_B-box	UniProtKB/Swiss-Prot
	Znf_RING	UniProtKB/Swiss-Prot
	Znf_RING/FYVE/PHD	UniProtKB/Swiss-Prot
	Znf_RING_CS	UniProtKB/Swiss-Prot
KEGG Report	rno:155812	UniProtKB/Swiss-Prot
NCBI Gene	155812	ENTREZGENE
PANTHER	E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED	UniProtKB/Swiss-Prot
	E3 UBIQUITIN-PROTEIN LIGASE TRIM9	UniProtKB/Swiss-Prot
Pfam	ANCHR-like_BBOX	UniProtKB/Swiss-Prot
	fn3	UniProtKB/Swiss-Prot
	SPRY	UniProtKB/Swiss-Prot
	zf-B_box	UniProtKB/Swiss-Prot
	zf-RING_UBOX	UniProtKB/Swiss-Prot
PhenoGen	Trim9	PhenoGen
PROSITE	B302_SPRY	UniProtKB/Swiss-Prot
	COS	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	ZF_BBOX	UniProtKB/Swiss-Prot
	ZF_RING_1	UniProtKB/Swiss-Prot
	ZF_RING_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000007031	RatGTEx
SMART	BBC	UniProtKB/Swiss-Prot
	BBOX	UniProtKB/Swiss-Prot
	FN3	UniProtKB/Swiss-Prot
	RING	UniProtKB/Swiss-Prot
	SPRY	UniProtKB/Swiss-Prot
Superfamily-SCOP	B-box zinc-binding domain	UniProtKB/Swiss-Prot
	RING/U-box	UniProtKB/Swiss-Prot
	SSF49265	UniProtKB/Swiss-Prot
	SSF49899	UniProtKB/Swiss-Prot
UniProt	A0A8I5XWL7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZL10	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A649_RAT	UniProtKB/TrEMBL
	A0A8I6AAA7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AJF0_RAT	UniProtKB/TrEMBL
	A0A8I6ANE4_RAT	UniProtKB/TrEMBL
	A6HBZ2	ENTREZGENE, UniProtKB/TrEMBL
	A6HBZ3_RAT	UniProtKB/TrEMBL
	Q91ZY8	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-31	Trim9	tripartite motif-containing 9	Trim9	tripartite motif protein 9	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-30	Trim9	tripartite motif protein 9		tripartite motif-containing 9	Name updated	1299863	APPROVED
2004-09-10	Trim9	tripartite motif-containing 9		tripartite motif protein 9	Name updated	1299863	APPROVED
2004-02-26	Trim9	tripartite motif protein 9			Symbol and Name status set to approved	625702	APPROVED
2002-08-07	Trim9	tripartite motif protein 9			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_physical_interaction	binds to monomeric SNAP-25	631246
gene_protein	710 amino acids	631246

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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