Gene Ontology Annotations
Click to see Annotation Detail View
References
References - curated
Genomics
Variants
miRNA Target Status
Predicted Target Of
Summary Value | Count of predictions: | 46 | Count of miRNA genes: | 43 | Interacting mature miRNAs: | 44 | Transcripts: | ENSRNOT00000061427 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
Markers in Region
BI283846 |
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RH128922 |
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BI284841 |
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BI285828 |
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Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPMLow: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM
circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | nervous system | renal system | reproductive system | |
High | ||||||||
Medium | 9 | 5 | ||||||
Low | 2 | 2 | 7 | 2 | 10 | 2 | 5 | |
Below cutoff | 9 | 4 | 4 | 3 | 4 | 6 | 2 | 3 |
Sequence
Nucleotide Sequences
RefSeq Acc Id: | ENSRNOT00000061427 ⟹ ENSRNOP00000058146 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_172073 ⟹ NP_742070 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
Protein Sequences
Protein RefSeqs | NP_742070 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | BAA32481 | (Get FASTA) | NCBI Sequence Viewer |
EDL93856 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000058146 | ||
ENSRNOP00000058146.2 |
RefSeq Acc Id: | NP_742070 ⟸ NM_172073 |
- Peptide Label: | precursor |
- UniProtKB: | O88206 (UniProtKB/TrEMBL), F7EWR8 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000058146 ⟸ ENSRNOT00000061427 |