Anp32b (acidic nuclear phosphoprotein 32 family member B) - Rat Genome Database

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Gene: Anp32b (acidic nuclear phosphoprotein 32 family member B) Rattus norvegicus
Analyze
Symbol: Anp32b
Name: acidic nuclear phosphoprotein 32 family member B
RGD ID: 621285
Description: Predicted to enable RNA polymerase binding activity and histone binding activity. Involved in negative regulation of apoptotic process; positive regulation of G1/S transition of mitotic cell cycle; and positive regulation of cell population proliferation. Predicted to be located in cytoplasm and nucleolus. Predicted to be active in nucleus. Orthologous to human ANP32B (acidic nuclear phosphoprotein 32 family member B); PARTICIPATES IN CRM1 export pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: acidic (leucine-rich) nuclear phosphoprotein 32 family, member B; acidic leucine-rich nuclear phosphoprotein 32 family member B; acidic nuclear phosphoprotein 32 family, member B; PAL31; proliferation related acidic leucine rich protein PAL31; proliferation-related acidic leucine-rich protein PAL31
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8565,538,872 - 65,561,305 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl565,538,535 - 65,561,437 (+)EnsemblGRCr8
mRatBN7.2560,743,077 - 60,765,726 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl560,743,443 - 60,765,717 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx562,715,573 - 62,737,025 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0564,534,945 - 64,556,401 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0564,504,360 - 64,525,815 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0562,070,709 - 62,094,633 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl562,071,346 - 62,094,633 (+)Ensemblrn6Rnor6.0
Rnor_5.0566,592,162 - 66,624,323 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4563,044,718 - 63,058,038 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera559,304,609 - 59,327,346 (+)NCBICelera
RGSC_v3.1563,044,896 - 63,058,218 (+)NCBI
Cytogenetic Map5q22NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
6-propyl-2-thiouracil  (EXP)
aminoglutethimide  (ISO)
amitrole  (EXP)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
busulfan  (ISO)
butanal  (ISO)
cadmium dichloride  (EXP)
cannabidiol  (ISO)
carbon nanotube  (ISO)
carbonyl sulfide  (EXP)
CGP 52608  (ISO)
chloropicrin  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
chromium(6+)  (ISO)
clofarabine  (ISO)
clofibric acid  (EXP)
Cuprizon  (EXP)
cyclosporin A  (ISO)
DDE  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
enzyme inhibitor  (ISO)
flutamide  (EXP)
folic acid  (ISO)
gentamycin  (EXP)
GSK-J4  (ISO)
ivermectin  (ISO)
L-methionine  (ISO)
lipopolysaccharide  (ISO)
menadione  (ISO)
methimazole  (EXP)
N-nitrosodiethylamine  (EXP)
nefazodone  (EXP)
nitrates  (ISO)
oxaliplatin  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
pirinixic acid  (ISO)
propanal  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
T-2 toxin  (EXP)
thimerosal  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
topotecan  (EXP)
trichloroethene  (ISO)
trichostatin A  (ISO)
trimellitic anhydride  (ISO)
troglitazone  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
vorinostat  (ISO)
zearalenone  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)
cytosol  (ISO)
nucleolus  (ISO)
nucleoplasm  (ISO)
nucleus  (IBA,IEA,ISO)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Synaptotagmin 11 interacts with components of the RNA-induced silencing complex RISC in clonal pancreatic beta-cells. Milochau A, etal., FEBS Lett. 2014 Jun 27;588(14):2217-22. doi: 10.1016/j.febslet.2014.05.031. Epub 2014 May 29.
4. Postage for the messenger: designating routes for nuclear mRNA export. Natalizio BJ and Wente SR, Trends Cell Biol. 2013 Aug;23(8):365-73. doi: 10.1016/j.tcb.2013.03.006. Epub 2013 Apr 11.
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Comprehensive gene review and curation RGD comprehensive gene curation
9. PAL31, a nuclear protein required for progression to the S phase. Sun W, etal., Biochem Biophys Res Commun 2001 Feb 2;280(4):1048-54.
10. Proliferation related acidic leucine-rich protein PAL31 functions as a caspase-3 inhibitor. Sun W, etal., Biochem Biophys Res Commun. 2006 Apr 14;342(3):817-23. Epub 2006 Feb 17.
11. Cytoprotective and anti-inflammatory effects of PAL31 overexpression in glial cells. Tseng FW, etal., J Biomed Sci. 2014 Jul 17;21:60. doi: 10.1186/1423-0127-21-60.
Additional References at PubMed
PMID:9285060   PMID:10716735   PMID:10913355   PMID:12477932   PMID:14703996   PMID:15489334   PMID:15895553   PMID:16791210   PMID:17178712   PMID:19141070   PMID:20015864   PMID:20458337  
PMID:20538007   PMID:21636789   PMID:22705300   PMID:25931508   PMID:31505169  


Genomics

Comparative Map Data
Anp32b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8565,538,872 - 65,561,305 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl565,538,535 - 65,561,437 (+)EnsemblGRCr8
mRatBN7.2560,743,077 - 60,765,726 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl560,743,443 - 60,765,717 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx562,715,573 - 62,737,025 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0564,534,945 - 64,556,401 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0564,504,360 - 64,525,815 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0562,070,709 - 62,094,633 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl562,071,346 - 62,094,633 (+)Ensemblrn6Rnor6.0
Rnor_5.0566,592,162 - 66,624,323 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4563,044,718 - 63,058,038 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera559,304,609 - 59,327,346 (+)NCBICelera
RGSC_v3.1563,044,896 - 63,058,218 (+)NCBI
Cytogenetic Map5q22NCBI
ANP32B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38997,983,341 - 98,015,943 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl997,983,215 - 98,015,943 (+)Ensemblhg38GRCh38
GRCh379100,745,623 - 100,778,225 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36999,785,310 - 99,818,046 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34997,825,197 - 97,857,776NCBI
Celera971,259,753 - 71,292,490 (+)NCBICelera
Cytogenetic Map9q22.33NCBI
HuRef970,346,857 - 70,378,291 (+)NCBIHuRef
CHM1_19100,892,012 - 100,924,659 (+)NCBICHM1_1
T2T-CHM13v2.09110,155,281 - 110,187,884 (+)NCBIT2T-CHM13v2.0
Anp32b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39446,450,926 - 46,472,657 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl446,450,902 - 46,472,657 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38446,450,926 - 46,472,657 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl446,450,902 - 46,472,657 (+)Ensemblmm10GRCm38
MGSCv37446,463,989 - 46,485,395 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36446,472,215 - 46,493,623 (+)NCBIMGSCv36mm8
Celera446,475,780 - 46,497,386 (+)NCBICelera
Cytogenetic Map4B1NCBI
cM Map424.79NCBI
Anp32b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541927,471,930 - 27,488,065 (-)Ensembl
ChiLan1.0NW_00495541927,471,539 - 27,553,078 (-)NCBIChiLan1.0ChiLan1.0
ANP32B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21141,439,478 - 41,477,862 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1941,441,855 - 41,479,153 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0969,075,972 - 69,108,178 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1997,198,447 - 97,228,536 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl997,207,823 - 97,228,542 (+)EnsemblpanPan2panpan1.1
ANP32B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11155,230,017 - 55,272,744 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1155,243,854 - 55,350,194 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1153,663,727 - 53,706,272 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01156,342,087 - 56,384,716 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1156,360,282 - 56,462,127 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11154,838,237 - 54,880,571 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01154,868,718 - 54,911,284 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01155,565,302 - 55,607,676 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Anp32b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947170,187,829 - 170,210,294 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365246,742,853 - 6,756,038 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365246,735,047 - 6,757,874 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANP32B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1239,842,067 - 239,868,403 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11239,842,062 - 239,868,404 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21268,022,424 - 268,037,942 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANP32B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11241,400,796 - 41,432,756 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1241,401,188 - 41,432,711 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603838,442,243 - 38,474,164 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anp32b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248252,814,758 - 2,844,008 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Anp32b
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1199,536,059 - 99,558,254 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Anp32b
210 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:38
Count of miRNA genes:37
Interacting mature miRNAs:37
Transcripts:ENSRNOT00000012478
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53801167083011670Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)55266537294894052Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)53275164977751649Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
6907115Mcs29Mammary carcinoma susceptibility QTL 29mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)53800433183004331Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)52367149379046465Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)565089051103648916Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)548523123134369373Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53801167083011670Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53801167083011670Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
1331782Rf36Renal function QTL 363.296kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)539019942102105896Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)53331167378311673Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)53275164977751649Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)53998594884985948Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)5692228281330203Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53331167378311673Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)53952692484526924Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54852312391770353Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)560601597137492949Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906491770353Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)560511627105511627Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)564589016109589016Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5706553574335773Rat
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)51001906487027358Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52602321171023211Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)56458901693503770Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)556546393101546393Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)52367149368671493Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)56458901691762830Rat

Markers in Region
D5Got293  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2560,773,072 - 60,773,313 (+)MAPPERmRatBN7.2
Rnor_6.0562,101,984 - 62,102,224NCBIRnor6.0
Rnor_5.0566,629,973 - 66,630,213UniSTSRnor5.0
Rnor_5.0566,610,218 - 66,610,458UniSTSRnor5.0
RGSC_v3.4563,065,305 - 63,065,545UniSTSRGSC3.4
Celera559,334,912 - 59,335,152UniSTS
Cytogenetic Map5q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000012478   ⟹   ENSRNOP00000012478
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl565,539,430 - 65,561,437 (+)Ensembl
mRatBN7.2 Ensembl560,743,443 - 60,765,717 (+)Ensembl
Rnor_6.0 Ensembl562,071,346 - 62,094,633 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110089   ⟹   ENSRNOP00000088536
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl565,538,535 - 65,561,437 (+)Ensembl
mRatBN7.2 Ensembl560,750,610 - 60,765,717 (+)Ensembl
RefSeq Acc Id: NM_131911   ⟹   NP_571986
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8565,538,872 - 65,561,305 (+)NCBI
mRatBN7.2560,743,284 - 60,765,722 (+)NCBI
Rnor_6.0562,071,346 - 62,094,633 (+)NCBI
Rnor_5.0566,592,162 - 66,624,323 (+)NCBI
RGSC_v3.4563,044,718 - 63,058,038 (+)RGD
Celera559,304,609 - 59,327,346 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_571986 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH86508 (Get FASTA)   NCBI Sequence Viewer  
  BAB12435 (Get FASTA)   NCBI Sequence Viewer  
  EDL98840 (Get FASTA)   NCBI Sequence Viewer  
  EDL98841 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000012478.5
  ENSRNOP00000088536
GenBank Protein Q9EST6 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_571986   ⟸   NM_131911
- UniProtKB: Q9EST6 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000012478   ⟸   ENSRNOT00000012478
Ensembl Acc Id: ENSRNOP00000088536   ⟸   ENSRNOT00000110089
Protein Domains
LRRCT   U2A'/phosphoprotein 32 family A C-terminal

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EST6-F1-model_v2 AlphaFold Q9EST6 1-272 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13693713
Promoter ID:EPDNEW_R4237
Type:initiation region
Name:Anp32b_1
Description:acidic nuclear phosphoprotein 32 family member B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0562,071,314 - 62,071,374EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621285 AgrOrtholog
BioCyc Gene G2FUF-41405 BioCyc
Ensembl Genes ENSRNOG00000009266 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000012478.6 UniProtKB/Swiss-Prot
  ENSRNOT00000110089 ENTREZGENE
Gene3D-CATH 3.80.10.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7103152 IMAGE-MGC_LOAD
InterPro AN32 UniProtKB/Swiss-Prot
  Leu-rich_rpt UniProtKB/Swiss-Prot
  LRR_dom_sf UniProtKB/Swiss-Prot
  U2A'_phosphoprotein32A_C UniProtKB/Swiss-Prot
KEGG Report rno:170724 UniProtKB/Swiss-Prot
MGC_CLONE MGC:91514 IMAGE-MGC_LOAD
NCBI Gene 170724 ENTREZGENE
PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY MEMBER B UniProtKB/Swiss-Prot
  PTHR11375 UniProtKB/Swiss-Prot
Pfam LRR_9 UniProtKB/Swiss-Prot
PhenoGen Anp32b PhenoGen
PROSITE LRR UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000009266 RatGTEx
SMART LRRcap UniProtKB/Swiss-Prot
Superfamily-SCOP L domain-like UniProtKB/Swiss-Prot
UniProt A0A8I6AAZ7_RAT UniProtKB/TrEMBL
  A6IJC0_RAT UniProtKB/TrEMBL
  A6IJC1_RAT UniProtKB/TrEMBL
  AN32B_RAT UniProtKB/Swiss-Prot
  F1LP34_RAT UniProtKB/TrEMBL
  Q9EST6 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-12 Anp32b  acidic nuclear phosphoprotein 32 family member B  Anp32b  acidic (leucine-rich) nuclear phosphoprotein 32 family, member B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Anp32b  acidic (leucine-rich) nuclear phosphoprotein 32 family, member B  Anp32b  acidic nuclear phosphoprotein 32 family, member B  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 Anp32b  acidic nuclear phosphoprotein 32 family, member B  PAL31  proliferation related acidic leucine rich protein PAL31  Symbol and Name updated 1299863 APPROVED
2002-08-07 PAL31  proliferation related acidic leucine rich protein PAL31      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_cellular_localization localizes in the nuclei at the S phase 633716
gene_expression expressed predominantly in fetal brain; expressed specific to the late G1 and S phases 633716
gene_regulation induced by prolactin (PRL) 633716