Zfp260 (zinc finger protein 260) - Rat Genome Database

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Pathways
Gene: Zfp260 (zinc finger protein 260) Rattus norvegicus
Analyze
Symbol: Zfp260
Name: zinc finger protein 260
RGD ID: 621205
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Orthologous to human ZNF260 (zinc finger protein 260); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: OZF; pancreas zinc finger protein; pancreas-only zinc finger protein 1; POZF-1; zfp-260; zinc finger protein 146; Znf146; Znf260
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Zfp260-ps1  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,469,861 - 94,477,377 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl194,460,733 - 94,478,217 (+)EnsemblGRCr8
mRatBN7.2185,336,567 - 85,349,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,336,618 - 85,350,067 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx190,754,671 - 90,762,156 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,223,696 - 99,231,215 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0192,512,927 - 92,520,412 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0188,452,133 - 88,465,110 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,451,958 - 88,453,578 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl188,457,594 - 88,465,110 (+)Ensemblrn6Rnor6.0
Rnor_5.0189,619,190 - 89,626,706 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,141,167 - 85,144,447 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera179,720,654 - 79,723,934 (+)NCBICelera
RGSC_v3.1185,219,287 - 85,220,864 (+)NCBI
Cytogenetic Map1q21NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IEA)
nucleoplasm  (IEA,ISO)
nucleus  (IBA,IEA)

References

References - curated
# Reference Title Reference Citation
1. The zinc finger protein OZF (ZNF146) is overexpressed in colorectal cancer. Ferbus D, etal., J Pathol 2003 Jun;200(2):177-82.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:15489334   PMID:16166646  


Genomics

Comparative Map Data
Zfp260
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8194,469,861 - 94,477,377 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl194,460,733 - 94,478,217 (+)EnsemblGRCr8
mRatBN7.2185,336,567 - 85,349,896 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl185,336,618 - 85,350,067 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx190,754,671 - 90,762,156 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,223,696 - 99,231,215 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0192,512,927 - 92,520,412 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0188,452,133 - 88,465,110 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl188,451,958 - 88,453,578 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl188,457,594 - 88,465,110 (+)Ensemblrn6Rnor6.0
Rnor_5.0189,619,190 - 89,626,706 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4185,141,167 - 85,144,447 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera179,720,654 - 79,723,934 (+)NCBICelera
RGSC_v3.1185,219,287 - 85,220,864 (+)NCBI
Cytogenetic Map1q21NCBI
ZNF260
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381936,510,687 - 36,528,271 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1936,510,687 - 36,528,696 (-)Ensemblhg38GRCh38
GRCh371937,001,589 - 37,019,173 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361941,693,434 - 41,711,010 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1933,786,507 - 33,804,162 (-)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1933,469,757 - 33,487,418 (-)NCBIHuRef
CHM1_11937,002,174 - 37,019,833 (-)NCBICHM1_1
T2T-CHM13v2.01939,185,915 - 39,203,539 (-)NCBIT2T-CHM13v2.0
Zfp260
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39729,794,207 - 29,807,047 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl729,794,202 - 29,807,047 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38730,094,782 - 30,107,622 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,094,777 - 30,107,622 (+)Ensemblmm10GRCm38
MGSCv37730,880,095 - 30,892,633 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36722,374,526 - 22,387,084 (+)NCBIMGSCv36mm8
MGSCv36729,803,836 - 29,816,374 (+)NCBIMGSCv36mm8
Celera724,685,371 - 24,697,725 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map717.26NCBI
Znf260
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554682,183,596 - 2,198,443 (-)Ensembl
ChiLan1.0NW_0049554682,183,596 - 2,198,443 (-)NCBIChiLan1.0ChiLan1.0
ZNF260
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22042,650,854 - 42,674,141 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11944,532,787 - 44,556,643 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01933,469,678 - 33,487,800 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11943,276,245 - 43,294,371 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1943,289,822 - 43,291,060 (+)EnsemblpanPan2panpan1.1
ZNF260
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11116,128,638 - 116,158,960 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1116,142,328 - 116,143,566 (-)EnsemblcanFam3CanFam3.1
ROS_Cfam_1.0 Ensembl1116,742,327 - 116,762,709 (-)EnsemblROS_Cfam_1.0 Ensembl
Znf260
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934911,645,983 - 11,664,855 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936922432,758 - 433,987 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936922415,815 - 419,076 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF260
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl645,847,013 - 45,880,709 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1645,858,074 - 45,882,107 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2641,303,023 - 41,323,794 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF260
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1631,368,786 - 31,381,940 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl631,369,241 - 31,370,479 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660739,168,992 - 9,187,788 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf260
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479410,689,551 - 10,704,101 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Znf260
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v12165,929,447 - 165,937,803 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zfp260
100 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:174
Count of miRNA genes:133
Interacting mature miRNAs:145
Transcripts:ENSRNOT00000049877, ENSRNOT00000074301
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)151940904101229020Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)187889942132889942Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)151941022208479811Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)139728272132889942Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)151940904168768703Rat
2300324Fetw1Fetal weight QTL 112.10.005fetal growth trait (VT:0004201)fetal body weight (CMO:0002080)192963855109494029Rat
1331800Scl25Serum cholesterol level QTL 253.013blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)187785026142582336Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183019780128019780Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)166404680111404680Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134184556172281316Rat
631512Scl6Serum cholesterol level QTL 69.6blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)18126986099645535Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)166009857160501508Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134565911208798288Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)193903998191260518Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)166400974132889942Rat
1549903Bp267Blood pressure QTL 267arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)184107164115183752Rat
2313083Bmd74Bone mineral density QTL 7440.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)191302413136302413Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)151511344153680016Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16540563796805205Rat
1358192Ept13Estrogen-induced pituitary tumorigenesis QTL 133.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)186622262131622262Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)158769992103769992Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)166077886111077886Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of, or within a discrete space in an open field apparatus (CMO:0001514)192683681137683681Rat
10054135Gmadr2Adrenal mass QTL 21.970.0129adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)186993904131993904Rat
152025249Scl82Serum cholesterol level QTL 824.77blood cholesterol amount (VT:0000180)152891222109116986Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)192683681137683681Rat
7411712Strs4Sensitivity to stroke QTL 48.7cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)187558587132558587Rat

Markers in Region
D1Bda10  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2185,346,425 - 85,346,740 (+)MAPPERmRatBN7.2
Rnor_6.0188,461,640 - 88,461,954NCBIRnor6.0
Rnor_6.0188,451,836 - 88,452,150NCBIRnor6.0
Rnor_5.0189,613,432 - 89,613,746UniSTSRnor5.0
Rnor_5.0189,623,236 - 89,623,550UniSTSRnor5.0
RGSC_v3.4185,141,203 - 85,141,517UniSTSRGSC3.4
Celera179,720,690 - 79,721,004UniSTS
Cytogenetic Map1q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
23 13 84 231 117 112 69 146 69 12 489 285 22 197 104 142 43 25 25

Sequence


Ensembl Acc Id: ENSRNOT00000049877   ⟹   ENSRNOP00000047459
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,467,216 - 94,477,549 (+)Ensembl
mRatBN7.2 Ensembl185,344,937 - 85,349,891 (+)Ensembl
Rnor_6.0 Ensembl188,457,594 - 88,465,110 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000074301   ⟹   ENSRNOP00000065656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,469,169 - 94,477,549 (+)Ensembl
mRatBN7.2 Ensembl185,336,618 - 85,350,067 (+)Ensembl
Rnor_6.0 Ensembl188,451,958 - 88,453,578 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103714   ⟹   ENSRNOP00000088893
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,464,100 - 94,478,042 (+)Ensembl
mRatBN7.2 Ensembl185,336,923 - 85,349,904 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000113539   ⟹   ENSRNOP00000087535
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,460,733 - 94,477,549 (+)Ensembl
mRatBN7.2 Ensembl185,336,619 - 85,350,067 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000124657   ⟹   ENSRNOP00000100166
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,460,782 - 94,477,549 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000132878   ⟹   ENSRNOP00000107711
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,464,867 - 94,478,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000134391   ⟹   ENSRNOP00000102348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,460,793 - 94,477,549 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000140816   ⟹   ENSRNOP00000103403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,464,100 - 94,478,042 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000149556   ⟹   ENSRNOP00000106452
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,464,070 - 94,478,143 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000151639   ⟹   ENSRNOP00000105583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl194,468,350 - 94,478,217 (+)Ensembl
RefSeq Acc Id: NM_017364   ⟹   NP_059060
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8194,469,861 - 94,477,377 (+)NCBI
mRatBN7.2185,342,380 - 85,349,896 (+)NCBI
Rnor_6.0188,457,594 - 88,465,110 (+)NCBI
Rnor_5.0189,619,190 - 89,626,706 (+)NCBI
RGSC_v3.4185,141,167 - 85,144,447 (+)RGD
Celera179,720,654 - 79,723,934 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_059060 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB01227 (Get FASTA)   NCBI Sequence Viewer  
  AAH99805 (Get FASTA)   NCBI Sequence Viewer  
  EDM07799 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000047459.3
  ENSRNOP00000065656
  ENSRNOP00000065656.1
  ENSRNOP00000087535.1
  ENSRNOP00000088893.1
GenBank Protein Q62981 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_059060   ⟸   NM_017364
- UniProtKB: Q499Q6 (UniProtKB/Swiss-Prot),   Q62981 (UniProtKB/Swiss-Prot),   A6J9T5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000065656   ⟸   ENSRNOT00000074301
Ensembl Acc Id: ENSRNOP00000047459   ⟸   ENSRNOT00000049877
Ensembl Acc Id: ENSRNOP00000087535   ⟸   ENSRNOT00000113539
Ensembl Acc Id: ENSRNOP00000088893   ⟸   ENSRNOT00000103714
Ensembl Acc Id: ENSRNOP00000102348   ⟸   ENSRNOT00000134391
Ensembl Acc Id: ENSRNOP00000106452   ⟸   ENSRNOT00000149556
Ensembl Acc Id: ENSRNOP00000105583   ⟸   ENSRNOT00000151639
Ensembl Acc Id: ENSRNOP00000103403   ⟸   ENSRNOT00000140816
Ensembl Acc Id: ENSRNOP00000107711   ⟸   ENSRNOT00000132878
Ensembl Acc Id: ENSRNOP00000100166   ⟸   ENSRNOT00000124657
Protein Domains
C2H2-type

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62981-F1-model_v2 AlphaFold Q62981 1-407 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621205 AgrOrtholog
BioCyc Gene G2FUF-60149 BioCyc
Ensembl Genes ENSRNOG00000020762 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00000046867 Ensembl
Ensembl Transcript ENSRNOT00000049877.5 UniProtKB/Swiss-Prot
  ENSRNOT00000074301 ENTREZGENE
  ENSRNOT00000074301.3 UniProtKB/Swiss-Prot
  ENSRNOT00000103714.1 UniProtKB/Swiss-Prot
  ENSRNOT00000113539.1 UniProtKB/Swiss-Prot
Gene3D-CATH Classic Zinc Finger UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7937786 IMAGE-MGC_LOAD
InterPro Znf_C2H2_sf UniProtKB/Swiss-Prot
  Znf_C2H2_type UniProtKB/Swiss-Prot
KEGG Report rno:53982 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124623 IMAGE-MGC_LOAD
NCBI Gene 53982 ENTREZGENE
PANTHER ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/Swiss-Prot
  ZINC FINGER PROTEIN ZFP2 UniProtKB/Swiss-Prot
Pfam zf-C2H2 UniProtKB/Swiss-Prot
  zf-C2H2_6 UniProtKB/Swiss-Prot
  zf-H2C2_2 UniProtKB/Swiss-Prot
PhenoGen Zfp260 PhenoGen
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/Swiss-Prot
  ZINC_FINGER_C2H2_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000020762 RatGTEx
  ENSRNOG00000046867 RatGTEx
SMART ZnF_C2H2 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF57667 UniProtKB/Swiss-Prot
UniProt A6J9T5 ENTREZGENE, UniProtKB/TrEMBL
  Q499Q6 ENTREZGENE
  Q62981 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q499Q6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Zfp260  zinc finger protein 260  Znf146    Symbol updated 1299863 APPROVED
2002-08-07 Znf146        Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference