Vax1 (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 1 | 268,310,644 - 268,326,713 (-) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 1 | 268,311,348 - 268,316,464 (-) | Ensembl | | | | GRCr8 | mRatBN7.2 | 1 | 258,324,571 - 258,342,396 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 258,326,276 - 258,330,192 (-) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 1 | 266,532,877 - 266,536,799 (-) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 273,238,899 - 273,242,819 (-) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 265,880,448 - 265,884,366 (-) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 280,334,897 - 280,338,813 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 280,334,897 - 280,338,813 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 287,695,646 - 287,699,562 (-) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 1 | 265,699,404 - 265,703,320 (-) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 1 | 253,980,379 - 253,984,299 (-) | NCBI | | Celera | | | RGSC_v3.1 | 1 | 265,910,448 - 265,914,365 (-) | NCBI | | | | | Cytogenetic Map | 1 | q55 | NCBI | | | | |
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VAX1 (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 10 | 117,128,520 - 117,138,270 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 117,128,521 - 117,138,301 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 10 | 118,888,031 - 118,897,781 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 118,878,022 - 118,887,802 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 10 | 112,617,376 - 112,627,160 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q25.3 | NCBI | | | | | HuRef | 10 | 112,516,187 - 112,526,080 (-) | NCBI | | HuRef | | | CHM1_1 | 10 | 119,172,341 - 119,182,118 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 118,023,007 - 118,032,756 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Vax1 (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 19 | 59,152,912 - 59,158,829 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 59,154,619 - 59,158,488 (-) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 19 | 59,164,480 - 59,170,397 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 59,166,187 - 59,170,056 (-) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 19 | 59,240,677 - 59,244,519 (-) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 59,219,437 - 59,223,279 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 61,364,938 - 61,368,428 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | D3 | NCBI | | | | | cM Map | 19 | 54.61 | NCBI | | | | |
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Vax1 (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955431 | 21,853,636 - 21,857,547 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955431 | 21,853,636 - 21,857,547 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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VAX1 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 8 | 129,000,474 - 129,007,775 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 129,007,153 - 129,013,113 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 113,710,934 - 113,720,671 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 117,139,483 - 117,148,979 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | |
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VAX1 (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 28 | 27,624,699 - 27,628,736 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 27,623,971 - 27,628,717 (-) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 27,768,175 - 27,772,234 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 28,154,409 - 28,158,468 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 28,153,678 - 28,158,468 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 28 | 27,715,574 - 27,719,628 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 27,729,062 - 27,733,114 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 27,923,619 - 27,927,682 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Vax1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024407213 | 18,581,259 - 18,586,636 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936486 | 6,974,662 - 6,978,542 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936486 | 6,972,972 - 6,978,544 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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VAX1 (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 14 | 127,271,566 - 127,275,744 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 127,269,723 - 127,277,007 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 138,568,540 - 138,574,416 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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VAX1 (Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChlSab1.1 | 9 | 109,925,282 - 109,935,003 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 109,930,708 - 109,934,763 (-) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666048 | 71,182,204 - 71,191,902 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Vax1 (Heterocephalus glaber - naked mole-rat) |
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Vax1 (Rattus rattus - black rat) |
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