Imported Disease Annotations - MGITerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | hydrocephalus | | ISS | Kif27 (Mus musculus) | 13592920 | OMIM:123155 more ... | MouseDO | | |
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Imported Disease Annotations - MGITerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | hydrocephalus | | ISS | Kif27 (Mus musculus) | 13592920 | OMIM:123155 more ... | MouseDO | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
3. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
4. | NCBI rat LocusLink and RefSeq merged data October 15, 2003 | NCBI rat LocusLink and RefSeq merged data October 15, 2003 |
5. | Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs. | Oduru S, etal., BMC Genomics 2003 Jun 3;4(1):22. |
6. | GOA pipeline | RGD automated data pipeline |
7. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
8. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
9. | Kinesin-related proteins in the mammalian testes: candidate motors for meiosis and morphogenesis. | Sperry AO and Zhao LP, Mol Biol Cell 1996 Feb;7(2):289-305. |
Kif27 (Rattus norvegicus - Norway rat) |
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KIF27 (Homo sapiens - human) |
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Kif27 (Mus musculus - house mouse) |
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Kif27 (Chinchilla lanigera - long-tailed chinchilla) |
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LOC100967959 (Pan paniscus - bonobo/pygmy chimpanzee) |
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KIF27 (Canis lupus familiaris - dog) |
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Kif27 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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KIF27 (Sus scrofa - pig) |
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KIF27 (Chlorocebus sabaeus - green monkey) |
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Kif27 (Heterocephalus glaber - naked mole-rat) |
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Variants in Kif27
285 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH144247 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 7 | ||||||||||||
Low | 16 | 11 | 6 | 4 | 6 | 3 | 3 | 74 | 35 | 34 | 11 | 3 | |
Below cutoff | 3 | 23 | 44 | 33 | 15 | 33 | 5 | 7 | 5 |
RefSeq Transcripts | NM_198050 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006253556 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006253557 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008771424 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063276057 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063276058 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063276059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_010058809 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_360721 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_360722 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC111867 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF035954 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC079385 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BK001053 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474032 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000017 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000026054 ⟹ ENSRNOP00000026054 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000080683 ⟹ ENSRNOP00000074434 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_198050 ⟹ NP_932167 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006253556 ⟹ XP_006253618 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006253557 ⟹ XP_006253619 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_063276057 ⟹ XP_063132127 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063276058 ⟹ XP_063132128 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063276059 ⟹ XP_063132129 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_010058809 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_360721 | ||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XR_360722 | ||||||||||||||||||||
Type: | NON-CODING | ||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_932167 | (Get FASTA) | NCBI Sequence Viewer |
XP_006253618 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006253619 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063132127 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063132128 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063132129 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAB88702 | (Get FASTA) | NCBI Sequence Viewer |
DAA01311 | (Get FASTA) | NCBI Sequence Viewer | |
EDL93912 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000026054 | ||
ENSRNOP00000026054.5 | |||
ENSRNOP00000074434 | |||
ENSRNOP00000074434.2 | |||
ENSRNOP00055033192 | |||
GenBank Protein | Q7M6Z5 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_932167 ⟸ NM_198050 |
- UniProtKB: | Q7M6Z5 (UniProtKB/Swiss-Prot), A6KAK4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006253618 ⟸ XM_006253556 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q7M6Z5 (UniProtKB/Swiss-Prot), A6KAK4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006253619 ⟸ XM_006253557 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8L2R9D5 (UniProtKB/TrEMBL), A6KAK4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000074434 ⟸ ENSRNOT00000080683 |
RefSeq Acc Id: | ENSRNOP00000026054 ⟸ ENSRNOT00000026054 |
RefSeq Acc Id: | XP_063132128 ⟸ XM_063276058 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_063132129 ⟸ XM_063276059 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_063132127 ⟸ XM_063276057 |
- Peptide Label: | isoform X1 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q7M6Z5-F1-model_v2 | AlphaFold | Q7M6Z5 | 1-1394 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13700281 | ||||||||
Promoter ID: | EPDNEW_R10804 | ||||||||
Type: | initiation region | ||||||||
Name: | Kif27_1 | ||||||||
Description: | kinesin family member 27 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:621071 | AgrOrtholog |
BioCyc Gene | G2FUF-10352 | BioCyc |
Ensembl Genes | ENSRNOG00000019257 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ENSRNOG00055023803 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000026054 | ENTREZGENE |
ENSRNOT00000026054.5 | UniProtKB/Swiss-Prot | |
ENSRNOT00000080683.2 | UniProtKB/TrEMBL | |
ENSRNOT00055040856 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.40.850.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Kinesin-like_fam | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Kinesin_motor_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Kinesin_motor_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Kinesin_motor_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:246209 | UniProtKB/Swiss-Prot |
NCBI Gene | 246209 | ENTREZGENE |
PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KINESIN FAMILY MEMBER 27 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Kinesin | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Kif27 | PhenoGen |
PRINTS | KINESINHEAVY | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | KINESIN_MOTOR_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KINESIN_MOTOR_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000019257 | RatGTEx |
ENSRNOG00055023803 | RatGTEx | |
SMART | KISc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF52540 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A8L2R9D5 | ENTREZGENE, UniProtKB/TrEMBL |
A6KAK4 | ENTREZGENE, UniProtKB/TrEMBL | |
KIF27_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2005-02-28 | Kif27 | kinesin family member 27 | LOC306736 | kinesin-related protein KIF27A | Data merged from RGD:727818 | 737654 | APPROVED |
2005-01-20 | Kif27 | kinesin family member 27 | Krp5 | kinesin-related protein KRP5 | Symbol and Name updated | 1299863 | APPROVED |
2002-08-07 | Krp5 | kinesin-related protein KRP5 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
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gene_expression | expressed in the testis | 633050 |
gene_product | member of the kinesin superfamily | 633050 |