Kif27 (kinesin family member 27) - Rat Genome Database

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Gene: Kif27 (kinesin family member 27) Rattus norvegicus
Analyze
Symbol: Kif27
Name: kinesin family member 27
RGD ID: 621071
Description: Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in cilium assembly and microtubule-based movement. Predicted to act upstream of or within epithelial cilium movement involved in extracellular fluid movement; establishment of localization in cell; and ventricular system development. Predicted to be located in cilium and extracellular region. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Orthologous to human KIF27 (kinesin family member 27); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: kinesin-like protein KIF27; kinesin-related protein KIF27A; kinesin-related protein KRP5; Krp5; LOC306736
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8176,304,960 - 6,383,745 (+)NCBIGRCr8
mRatBN7.2176,299,544 - 6,375,106 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl176,299,569 - 6,369,768 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx176,322,319 - 6,392,921 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0177,854,937 - 7,925,580 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0176,318,698 - 6,389,303 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0176,701,287 - 6,776,599 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl176,701,315 - 6,772,349 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0178,905,655 - 8,979,966 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41712,230,381 - 12,301,010 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11712,230,380 - 12,301,010 (+)NCBI
Celera176,409,277 - 6,479,398 (+)NCBICelera
Cytogenetic Map17p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. NCBI rat LocusLink and RefSeq merged data October 15, 2003 NCBI rat LocusLink and RefSeq merged data October 15, 2003
5. Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs. Oduru S, etal., BMC Genomics 2003 Jun 3;4(1):22.
6. GOA pipeline RGD automated data pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Kinesin-related proteins in the mammalian testes: candidate motors for meiosis and morphogenesis. Sperry AO and Zhao LP, Mol Biol Cell 1996 Feb;7(2):289-305.
Additional References at PubMed
PMID:12477932   PMID:19305393   PMID:21746835   PMID:23376485  


Genomics

Comparative Map Data
Kif27
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8176,304,960 - 6,383,745 (+)NCBIGRCr8
mRatBN7.2176,299,544 - 6,375,106 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl176,299,569 - 6,369,768 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx176,322,319 - 6,392,921 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0177,854,937 - 7,925,580 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0176,318,698 - 6,389,303 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0176,701,287 - 6,776,599 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl176,701,315 - 6,772,349 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0178,905,655 - 8,979,966 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41712,230,381 - 12,301,010 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11712,230,380 - 12,301,010 (+)NCBI
Celera176,409,277 - 6,479,398 (+)NCBICelera
Cytogenetic Map17p14NCBI
KIF27
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38983,834,099 - 83,921,432 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl983,834,099 - 83,921,465 (-)EnsemblGRCh38hg38GRCh38
GRCh37986,449,014 - 86,536,347 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36985,641,433 - 85,726,162 (-)NCBINCBI36Build 36hg18NCBI36
Build 34983,681,170 - 83,765,896NCBI
Celera957,021,633 - 57,107,363 (-)NCBICelera
Cytogenetic Map9q21.32NCBI
HuRef956,276,916 - 56,362,073 (-)NCBIHuRef
CHM1_1986,598,318 - 86,683,066 (-)NCBICHM1_1
T2T-CHM13v2.0995,983,785 - 96,071,752 (-)NCBIT2T-CHM13v2.0
Kif27
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391358,432,541 - 58,512,559 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1358,435,316 - 58,506,936 (-)EnsemblGRCm39 Ensembl
GRCm381358,284,727 - 58,364,745 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1358,287,502 - 58,359,122 (-)EnsemblGRCm38mm10GRCm38
MGSCv371358,388,877 - 58,456,223 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361358,297,139 - 58,364,485 (-)NCBIMGSCv36mm8
Celera1359,349,633 - 59,416,694 (-)NCBICelera
Cytogenetic Map13B1NCBI
cM Map1330.99NCBI
Kif27
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554323,311,026 - 3,438,944 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554323,298,427 - 3,441,116 (+)NCBIChiLan1.0ChiLan1.0
LOC100967959
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21184,951,618 - 85,001,782 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1984,934,307 - 85,044,129 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0939,036,564 - 39,098,005 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1983,225,736 - 83,278,201 (-)NCBIpanpan1.1PanPan1.1panPan2
KIF27
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1175,554,024 - 75,638,421 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl175,553,751 - 75,637,456 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,203,471 - 76,289,810 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0175,854,838 - 75,941,236 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl175,854,800 - 75,939,183 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1175,668,754 - 75,754,818 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0175,431,669 - 75,519,912 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,134,517 - 76,221,018 (+)NCBIUU_Cfam_GSD_1.0
Kif27
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947122,210,619 - 122,320,548 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936828703,927 - 796,881 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936828706,635 - 796,826 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF27
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1031,026,144 - 31,114,503 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11031,026,133 - 31,117,900 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21034,991,892 - 35,051,403 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIF27
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11294,651,652 - 94,734,488 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1294,651,661 - 94,734,014 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603883,065,546 - 83,152,298 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kif27
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248097,357,008 - 7,488,456 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248097,356,598 - 7,501,691 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kif27
285 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:100
Count of miRNA genes:74
Interacting mature miRNAs:85
Transcripts:ENSRNOT00000026054
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat

Markers in Region
RH144247  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2176,308,515 - 6,308,667 (+)MAPPERmRatBN7.2
Rnor_6.0176,710,262 - 6,710,413NCBIRnor6.0
Rnor_5.0178,914,635 - 8,914,786UniSTSRnor5.0
RGSC_v3.41712,239,328 - 12,239,479UniSTSRGSC3.4
Celera176,418,224 - 6,418,375UniSTS
RH 3.4 Map1771.0UniSTS
Cytogenetic Map17p14UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 7
Low 16 11 6 4 6 3 3 74 35 34 11 3
Below cutoff 3 23 44 33 15 33 5 7 5

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_198050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006253556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006253557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008771424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063276059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010058809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_360721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_360722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC111867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF035954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC079385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BK001053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000026054   ⟹   ENSRNOP00000026054
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl176,299,569 - 6,369,768 (+)Ensembl
Rnor_6.0 Ensembl176,701,315 - 6,771,233 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000080683   ⟹   ENSRNOP00000074434
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl176,299,569 - 6,369,768 (+)Ensembl
Rnor_6.0 Ensembl176,701,420 - 6,772,349 (+)Ensembl
RefSeq Acc Id: NM_198050   ⟹   NP_932167
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,989 - 6,375,182 (+)NCBI
mRatBN7.2176,299,569 - 6,369,768 (+)NCBI
Rnor_6.0176,701,315 - 6,771,233 (+)NCBI
Rnor_5.0178,905,655 - 8,979,966 (+)NCBI
RGSC_v3.41712,230,381 - 12,301,010 (+)RGD
Celera176,409,277 - 6,479,398 (+)RGD
Sequence:
RefSeq Acc Id: XM_006253556   ⟹   XP_006253618
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,378,732 (+)NCBI
mRatBN7.2176,299,544 - 6,371,158 (+)NCBI
Rnor_6.0176,701,287 - 6,772,418 (+)NCBI
Rnor_5.0178,905,655 - 8,979,966 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006253557   ⟹   XP_006253619
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,378,732 (+)NCBI
mRatBN7.2176,299,544 - 6,371,158 (+)NCBI
Rnor_6.0176,701,287 - 6,772,418 (+)NCBI
Rnor_5.0178,905,655 - 8,979,966 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063276057   ⟹   XP_063132127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,305,265 - 6,378,732 (+)NCBI
RefSeq Acc Id: XM_063276058   ⟹   XP_063132128
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,375,088 (+)NCBI
RefSeq Acc Id: XM_063276059   ⟹   XP_063132129
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,358,067 (+)NCBI
RefSeq Acc Id: XR_010058809
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,378,732 (+)NCBI
RefSeq Acc Id: XR_360721
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,378,732 (+)NCBI
mRatBN7.2176,299,544 - 6,373,319 (+)NCBI
Rnor_6.0176,701,287 - 6,774,767 (+)NCBI
Rnor_5.0178,905,655 - 8,979,966 (+)NCBI
Sequence:
RefSeq Acc Id: XR_360722
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8176,304,960 - 6,383,745 (+)NCBI
mRatBN7.2176,299,544 - 6,375,106 (+)NCBI
Rnor_6.0176,701,287 - 6,776,599 (+)NCBI
Rnor_5.0178,905,655 - 8,979,966 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_932167   ⟸   NM_198050
- UniProtKB: Q7M6Z5 (UniProtKB/Swiss-Prot),   A6KAK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253618   ⟸   XM_006253556
- Peptide Label: isoform X1
- UniProtKB: Q7M6Z5 (UniProtKB/Swiss-Prot),   A6KAK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006253619   ⟸   XM_006253557
- Peptide Label: isoform X2
- UniProtKB: A0A8L2R9D5 (UniProtKB/TrEMBL),   A6KAK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000074434   ⟸   ENSRNOT00000080683
RefSeq Acc Id: ENSRNOP00000026054   ⟸   ENSRNOT00000026054
RefSeq Acc Id: XP_063132128   ⟸   XM_063276058
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063132129   ⟸   XM_063276059
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063132127   ⟸   XM_063276057
- Peptide Label: isoform X1
Protein Domains
Kinesin motor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7M6Z5-F1-model_v2 AlphaFold Q7M6Z5 1-1394 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700281
Promoter ID:EPDNEW_R10804
Type:initiation region
Name:Kif27_1
Description:kinesin family member 27
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0176,701,286 - 6,701,346EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621071 AgrOrtholog
BioCyc Gene G2FUF-10352 BioCyc
Ensembl Genes ENSRNOG00000019257 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055023803 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000026054 ENTREZGENE
  ENSRNOT00000026054.5 UniProtKB/Swiss-Prot
  ENSRNOT00000080683.2 UniProtKB/TrEMBL
  ENSRNOT00055040856 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.850.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kinesin-like_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinesin_motor_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:246209 UniProtKB/Swiss-Prot
NCBI Gene 246209 ENTREZGENE
PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN FAMILY MEMBER 27 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Kinesin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Kif27 PhenoGen
PRINTS KINESINHEAVY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE KINESIN_MOTOR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KINESIN_MOTOR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000019257 RatGTEx
  ENSRNOG00055023803 RatGTEx
SMART KISc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8L2R9D5 ENTREZGENE, UniProtKB/TrEMBL
  A6KAK4 ENTREZGENE, UniProtKB/TrEMBL
  KIF27_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-02-28 Kif27  kinesin family member 27  LOC306736  kinesin-related protein KIF27A  Data merged from RGD:727818 737654 APPROVED
2005-01-20 Kif27  kinesin family member 27  Krp5  kinesin-related protein KRP5  Symbol and Name updated 1299863 APPROVED
2002-08-07 Krp5  kinesin-related protein KRP5      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in the testis 633050
gene_product member of the kinesin superfamily 633050