Rab26 (RAB26, member RAS oncogene family) - Rat Genome Database

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Gene: Rab26 (RAB26, member RAS oncogene family) Rattus norvegicus
Analyze
Symbol: Rab26
Name: RAB26, member RAS oncogene family
RGD ID: 620890
Description: Enables GTP binding activity. Involved in exocrine system development and regulation of exocytosis. Located in plasma membrane. Orthologous to human RAB26 (RAB26, member RAS oncogene family); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ras-related protein Rab-26
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,057,942 - 14,062,602 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1014,057,942 - 14,062,577 (-)EnsemblGRCr8
mRatBN7.21013,553,395 - 13,558,063 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1018,299,890 - 18,304,657 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,788,735 - 17,793,502 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,287,922 - 13,292,689 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,894,271 - 13,898,578 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)Ensemblrn6Rnor6.0
Rnor_5.01013,711,256 - 13,715,563 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41013,780,502 - 13,784,809 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1013,233,628 - 13,237,935 (-)NCBICelera
RGSC_v3.11013,780,501 - 13,783,719 (-)NCBI
Cytogenetic Map10q12NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function
G protein activity  (IEA,ISO,ISS)
GMP binding  (ISO,ISS)
GTP binding  (IBA,IDA,IEA,ISO,TAS)
GTPase activity  (IBA,IEA,TAS)
hydrolase activity  (IEA)
metal ion binding  (IEA)
nucleotide binding  (IEA)
protein binding  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
8. Molecular cloning of a new member of the Rab protein family, Rab 26, from rat pancreas. Wagner AC, etal., Biochem Biophys Res Commun 1995 Feb 27;207(3):950-6.
9. Expression, characterization, and localization of Rab26, a low molecular weight GTP-binding protein, in the rat parotid gland. Yoshie S, etal., Histochem Cell Biol. 2000 Apr;113(4):259-63.
Additional References at PubMed
PMID:15489334   PMID:20038531   PMID:23105096   PMID:25643395   PMID:29084947  


Genomics

Comparative Map Data
Rab26
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,057,942 - 14,062,602 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1014,057,942 - 14,062,577 (-)EnsemblGRCr8
mRatBN7.21013,553,395 - 13,558,063 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1018,299,890 - 18,304,657 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,788,735 - 17,793,502 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,287,922 - 13,292,689 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,894,271 - 13,898,578 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)Ensemblrn6Rnor6.0
Rnor_5.01013,711,256 - 13,715,563 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41013,780,502 - 13,784,809 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1013,233,628 - 13,237,935 (-)NCBICelera
RGSC_v3.11013,780,501 - 13,783,719 (-)NCBI
Cytogenetic Map10q12NCBI
RAB26
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,148,144 - 2,154,165 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,140,803 - 2,154,165 (+)Ensemblhg38GRCh38
GRCh37162,198,145 - 2,204,166 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,138,652 - 2,144,142 (+)NCBIBuild 36Build 36hg18NCBI36
Build 34162,138,651 - 2,144,141NCBI
Celera162,413,043 - 2,418,558 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,124,981 - 2,130,406 (+)NCBIHuRef
CHM1_1162,198,600 - 2,204,114 (+)NCBICHM1_1
T2T-CHM13v2.0162,170,604 - 2,176,626 (+)NCBIT2T-CHM13v2.0
Rab26
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,748,038 - 24,752,696 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,746,215 - 24,753,184 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381724,529,054 - 24,533,747 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,527,241 - 24,534,210 (-)Ensemblmm10GRCm38
MGSCv371724,665,999 - 24,670,692 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361724,256,654 - 24,261,489 (-)NCBIMGSCv36mm8
Celera1725,045,266 - 25,049,953 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.4NCBI
Rab26
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,114,333 - 15,120,123 (-)Ensembl
ChiLan1.0NW_00495544215,114,333 - 15,119,481 (-)NCBIChiLan1.0ChiLan1.0
LOC100977490
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,651,129 - 2,656,678 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,432,500 - 6,438,014 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,006,847 - 1,012,263 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,250,286 - 2,254,513 (+)NCBIPanPan1.1PanPan1.1panPan2
RAB26
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,806,750 - 38,812,541 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,807,487 - 38,812,379 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha640,045,910 - 40,051,589 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0639,115,273 - 39,120,961 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,115,276 - 39,121,022 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,800,104 - 38,805,782 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,772,414 - 38,778,087 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,251,172 - 39,256,854 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Rab26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,807,158 - 104,813,110 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366941,893,076 - 1,902,605 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366941,896,360 - 1,902,272 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAB26
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,831,981 - 39,837,515 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1339,831,981 - 39,837,510 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2342,344,040 - 42,349,574 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RAB26
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,041,871 - 2,049,623 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,043,829 - 2,049,836 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606829,012,370 - 29,018,651 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rab26
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913101,900 - 107,691 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624913101,788 - 107,267 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Rab26
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v191,812,402 - 1,817,040 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Rab26
7 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:205
Count of miRNA genes:153
Interacting mature miRNAs:173
Transcripts:ENSRNOT00000004249
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
631660Hcar1Hepatocarcinoma resistance QTL 13.40.0001liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)10666111835509383Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10666092373950353Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10589381150893811Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10125055464349221Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10589381150893811Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10687714251877142Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135730538Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10130004247Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10589381150893811Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10686461896620484Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1092219745922197Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)10210370847103708Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10589381150893811Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10117749933Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138832698Rat

Markers in Region
RH130595  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21013,553,457 - 13,553,669 (+)MAPPERmRatBN7.2
Rnor_6.01013,894,331 - 13,894,542NCBIRnor6.0
Rnor_5.01013,711,316 - 13,711,527UniSTSRnor5.0
RGSC_v3.41013,780,562 - 13,780,773UniSTSRGSC3.4
Celera1013,233,688 - 13,233,899UniSTS
Cytogenetic Map10q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 161 91 90 59 92 59 6 355 192 11 140 80 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_133580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039085147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063268368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005489684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010055125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC093937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC103090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U18771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000004249   ⟹   ENSRNOP00000004249
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1014,057,942 - 14,062,577 (-)Ensembl
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)Ensembl
Rnor_6.0 Ensembl1013,893,290 - 13,898,855 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000097378   ⟹   ENSRNOP00000083203
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1014,057,942 - 14,062,577 (-)Ensembl
mRatBN7.2 Ensembl1013,553,395 - 13,558,030 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000144497   ⟹   ENSRNOP00000104150
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1014,057,942 - 14,062,577 (-)Ensembl
RefSeq Acc Id: NM_133580   ⟹   NP_598264
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,942 - 14,062,577 (-)NCBI
mRatBN7.21013,553,395 - 13,558,030 (-)NCBI
Rnor_6.01013,894,271 - 13,898,578 (-)NCBI
Rnor_5.01013,711,256 - 13,715,563 (-)NCBI
RGSC_v3.41013,780,502 - 13,784,809 (-)RGD
Celera1013,233,628 - 13,237,935 (-)RGD
Sequence:
RefSeq Acc Id: XM_039085122   ⟹   XP_038941050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,602 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085125   ⟹   XP_038941053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,602 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085128   ⟹   XP_038941056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,601 (-)NCBI
mRatBN7.21013,553,395 - 13,558,062 (-)NCBI
RefSeq Acc Id: XM_039085130   ⟹   XP_038941058
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085134   ⟹   XP_038941062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,600 (-)NCBI
mRatBN7.21013,553,395 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085136   ⟹   XP_038941064
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,600 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085137   ⟹   XP_038941065
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,059 (-)NCBI
RefSeq Acc Id: XM_039085138   ⟹   XP_038941066
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,058 (-)NCBI
RefSeq Acc Id: XM_039085140   ⟹   XP_038941068
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,601 (-)NCBI
mRatBN7.21013,553,395 - 13,558,061 (-)NCBI
RefSeq Acc Id: XM_039085143   ⟹   XP_038941071
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,726 - 14,062,601 (-)NCBI
mRatBN7.21013,554,167 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085144   ⟹   XP_038941072
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,622 - 14,062,599 (-)NCBI
mRatBN7.21013,554,166 - 13,558,058 (-)NCBI
RefSeq Acc Id: XM_039085145   ⟹   XP_038941073
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,733 - 14,062,601 (-)NCBI
mRatBN7.21013,554,187 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_039085146   ⟹   XP_038941074
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
mRatBN7.21013,553,395 - 13,558,057 (-)NCBI
RefSeq Acc Id: XM_039085147   ⟹   XP_038941075
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,292 - 14,062,601 (-)NCBI
mRatBN7.21013,553,834 - 13,558,060 (-)NCBI
RefSeq Acc Id: XM_063268366   ⟹   XP_063124436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,057,943 - 14,062,599 (-)NCBI
RefSeq Acc Id: XM_063268368   ⟹   XP_063124438
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,835 - 14,062,601 (-)NCBI
RefSeq Acc Id: XR_005489682
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,621 - 14,062,600 (-)NCBI
mRatBN7.21013,554,072 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_005489683
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,647 - 14,062,601 (-)NCBI
mRatBN7.21013,554,093 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_005489684
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,647 - 14,062,601 (-)NCBI
mRatBN7.21013,554,106 - 13,558,060 (-)NCBI
RefSeq Acc Id: XR_010055125
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81014,058,619 - 14,062,599 (-)NCBI
RefSeq Acc Id: NP_598264   ⟸   NM_133580
- UniProtKB: P51156 (UniProtKB/Swiss-Prot),   Q6P6W7 (UniProtKB/Swiss-Prot),   A6HCT9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000004249   ⟸   ENSRNOT00000004249
RefSeq Acc Id: XP_038941056   ⟸   XM_039085128
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038941053   ⟸   XM_039085125
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038941050   ⟸   XM_039085122
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038941068   ⟸   XM_039085140
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038941062   ⟸   XM_039085134
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038941065   ⟸   XM_039085137
- Peptide Label: isoform X8
- UniProtKB: A0A8I5ZZI4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038941064   ⟸   XM_039085136
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038941058   ⟸   XM_039085130
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038941066   ⟸   XM_039085138
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038941074   ⟸   XM_039085146
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038941075   ⟸   XM_039085147
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038941072   ⟸   XM_039085144
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038941071   ⟸   XM_039085143
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038941073   ⟸   XM_039085145
- Peptide Label: isoform X13
Ensembl Acc Id: ENSRNOP00000083203   ⟸   ENSRNOT00000097378
RefSeq Acc Id: XP_063124436   ⟸   XM_063268366
- Peptide Label: isoform X6
- UniProtKB: A0A8L2Q1F9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063124438   ⟸   XM_063268368
- Peptide Label: isoform X16
Ensembl Acc Id: ENSRNOP00000104150   ⟸   ENSRNOT00000144497

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P51156-F1-model_v2 AlphaFold P51156 1-257 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697015
Promoter ID:EPDNEW_R7540
Type:single initiation site
Name:Rab26_1
Description:RAB26, member RAS oncogene family
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01013,898,900 - 13,898,960EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620890 AgrOrtholog
BioCyc Gene G2FUF-25848 BioCyc
Ensembl Genes ENSRNOG00000042086 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000004249 ENTREZGENE
  ENSRNOT00000097378 ENTREZGENE
  ENSRNOT00000144497 ENTREZGENE
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5599180 IMAGE-MGC_LOAD
InterPro P-loop_NTPase UniProtKB/Swiss-Prot
  Small_GTP-bd_dom UniProtKB/Swiss-Prot
  Small_GTPase UniProtKB/Swiss-Prot
  Small_GTPase_Rab UniProtKB/Swiss-Prot
KEGG Report rno:171111 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72316 IMAGE-MGC_LOAD
NCBI Gene 171111 ENTREZGENE
PANTHER LD44762P UniProtKB/Swiss-Prot
Pfam Ras UniProtKB/Swiss-Prot
PhenoGen Rab26 PhenoGen
PRINTS RASTRNSFRMNG UniProtKB/Swiss-Prot
PROSITE RAB UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000042086 RatGTEx
SMART ARF UniProtKB/Swiss-Prot
  RAB UniProtKB/Swiss-Prot
  RAN UniProtKB/Swiss-Prot
  RAS UniProtKB/Swiss-Prot
  RHO UniProtKB/Swiss-Prot
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot
UniProt A0A8I5ZZI4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2Q1F9 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LME8_RAT UniProtKB/TrEMBL
  A6HCT9 ENTREZGENE, UniProtKB/TrEMBL
  P51156 ENTREZGENE
  Q6P6W7 ENTREZGENE
  RAB26_RAT UniProtKB/Swiss-Prot
UniProt Secondary Q6P6W7 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-08-06 Rab26  RAB26, member RAS oncogene family      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in pancreas, kidney, brain, submandibular gland, and lung 633756
gene_product member of the Rab family of low molecular weight GTP-binding (LMWG) proteins 633756