Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | high grade glioma | | ISO | PHLDB1 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:19578367 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | high grade glioma | | ISO | PHLDB1 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:19578367 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Cloning of LL5, a novel protein encoding cDNA from a rat pituitary library. | Levi L, etal., Biochim Biophys Acta 1993 Nov 16;1216(2):342-4. |
3. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
Phldb1 (Rattus norvegicus - Norway rat) |
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PHLDB1 (Homo sapiens - human) |
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Phldb1 (Mus musculus - house mouse) |
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Phldb1 (Chinchilla lanigera - long-tailed chinchilla) |
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PHLDB1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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PHLDB1 (Canis lupus familiaris - dog) |
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Phldb1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PHLDB1 (Sus scrofa - pig) |
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PHLDB1 (Chlorocebus sabaeus - green monkey) |
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Phldb1 (Heterocephalus glaber - naked mole-rat) |
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Variants in Phldb1
141 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AU041016 |
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BI278154 |
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BE106591 |
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AU047896 |
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AU047883 |
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RH140559 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 43 | 7 | 4 | 11 | 4 | 6 | 9 | 74 | 35 | 34 | 11 | 6 |
Low | 50 | 37 | 8 | 37 | 2 | 2 | 7 | 2 | |||||
Below cutoff |
RefSeq Transcripts | NM_001191578 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001400943 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595434 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595435 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595436 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595437 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595438 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595439 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595440 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595441 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595442 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595443 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595444 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595445 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595446 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017595447 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039080760 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039080762 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039080764 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039080773 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264839 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264840 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264841 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264842 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264843 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264844 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264845 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264846 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264847 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264848 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264849 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264850 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264851 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264852 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264853 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264854 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264855 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264856 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264857 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264858 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264859 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264860 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264861 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264862 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264863 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264864 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264865 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264866 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264867 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264868 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264869 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264870 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264871 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264872 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264873 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264874 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264875 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264876 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264877 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264878 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264879 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264880 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264881 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063264882 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_001839138 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC095317 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC092599 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC104704 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH473975 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ220811 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000008 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X74226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000047303 ⟹ ENSRNOP00000046235 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000078816 ⟹ ENSRNOP00000068824 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000088034 ⟹ ENSRNOP00000069330 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000096683 ⟹ ENSRNOP00000096080 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000100408 ⟹ ENSRNOP00000091125 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000103833 ⟹ ENSRNOP00000094780 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000114831 ⟹ ENSRNOP00000087775 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001191578 ⟹ NP_001178507 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001400943 ⟹ NP_001387872 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039080760 ⟹ XP_038936688 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039080762 ⟹ XP_038936690 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039080764 ⟹ XP_038936692 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039080773 ⟹ XP_038936701 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063264839 ⟹ XP_063120909 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264840 ⟹ XP_063120910 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264841 ⟹ XP_063120911 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264842 ⟹ XP_063120912 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264843 ⟹ XP_063120913 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264844 ⟹ XP_063120914 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264845 ⟹ XP_063120915 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264846 ⟹ XP_063120916 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264847 ⟹ XP_063120917 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264848 ⟹ XP_063120918 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264849 ⟹ XP_063120919 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264850 ⟹ XP_063120920 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264851 ⟹ XP_063120921 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264852 ⟹ XP_063120922 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264853 ⟹ XP_063120923 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264854 ⟹ XP_063120924 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264855 ⟹ XP_063120925 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264856 ⟹ XP_063120926 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264857 ⟹ XP_063120927 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264858 ⟹ XP_063120928 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264859 ⟹ XP_063120929 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264860 ⟹ XP_063120930 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264861 ⟹ XP_063120931 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264862 ⟹ XP_063120932 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264863 ⟹ XP_063120933 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264864 ⟹ XP_063120934 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264865 ⟹ XP_063120935 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264866 ⟹ XP_063120936 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264867 ⟹ XP_063120937 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264868 ⟹ XP_063120938 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264869 ⟹ XP_063120939 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264870 ⟹ XP_063120940 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264871 ⟹ XP_063120941 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264872 ⟹ XP_063120942 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264873 ⟹ XP_063120943 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264874 ⟹ XP_063120944 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264875 ⟹ XP_063120945 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264876 ⟹ XP_063120946 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264877 ⟹ XP_063120947 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264878 ⟹ XP_063120948 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264879 ⟹ XP_063120949 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264880 ⟹ XP_063120950 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_063264881 ⟹ XP_063120951 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063264882 ⟹ XP_063120952 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001178507 | (Get FASTA) | NCBI Sequence Viewer |
NP_001387872 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038936688 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038936690 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038936692 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038936701 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120909 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120910 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120911 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120912 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120913 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120914 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120915 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120916 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120917 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120918 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120919 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120920 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120921 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120922 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120923 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120924 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120925 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120926 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120927 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120928 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120929 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120930 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120931 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120932 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120933 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120934 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120935 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120936 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120937 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120938 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120939 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120940 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120941 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120942 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120943 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120944 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120945 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120946 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120947 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120948 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120949 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120950 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120951 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063120952 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAI04705 | (Get FASTA) | NCBI Sequence Viewer |
CAA52297 | (Get FASTA) | NCBI Sequence Viewer | |
EDL95331 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000046235 | ||
ENSRNOP00000046235.3 | |||
ENSRNOP00000068824.2 | |||
ENSRNOP00000069330.1 | |||
ENSRNOP00000087775.1 | |||
ENSRNOP00000091125.1 | |||
ENSRNOP00000094780 | |||
ENSRNOP00000094780.1 | |||
ENSRNOP00000096080.1 | |||
GenBank Protein | Q63312 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001178507 ⟸ NM_001191578 |
- Peptide Label: | isoform 1 |
- UniProtKB: | D3ZNS1 (UniProtKB/TrEMBL), A0A8I6A9F1 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000046235 ⟸ ENSRNOT00000047303 |
RefSeq Acc Id: | ENSRNOP00000068824 ⟸ ENSRNOT00000078816 |
RefSeq Acc Id: | ENSRNOP00000069330 ⟸ ENSRNOT00000088034 |
RefSeq Acc Id: | XP_038936701 ⟸ XM_039080773 |
- Peptide Label: | isoform X37 |
- UniProtKB: | A0A0G2JV32 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038936692 ⟸ XM_039080764 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I6A9F1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038936690 ⟸ XM_039080762 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8I6A9F1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038936688 ⟸ XM_039080760 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A0A8I6A9F1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000091125 ⟸ ENSRNOT00000100408 |
RefSeq Acc Id: | ENSRNOP00000087775 ⟸ ENSRNOT00000114831 |
RefSeq Acc Id: | ENSRNOP00000094780 ⟸ ENSRNOT00000103833 |
RefSeq Acc Id: | ENSRNOP00000096080 ⟸ ENSRNOT00000096683 |
RefSeq Acc Id: | NP_001387872 ⟸ NM_001400943 |
- Peptide Label: | isoform 2 |
- UniProtKB: | A0A8I6AMV1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063120949 ⟸ XM_063264879 |
- Peptide Label: | isoform X44 |
RefSeq Acc Id: | XP_063120948 ⟸ XM_063264878 |
- Peptide Label: | isoform X43 |
RefSeq Acc Id: | XP_063120947 ⟸ XM_063264877 |
- Peptide Label: | isoform X42 |
RefSeq Acc Id: | XP_063120950 ⟸ XM_063264880 |
- Peptide Label: | isoform X44 |
RefSeq Acc Id: | XP_063120946 ⟸ XM_063264876 |
- Peptide Label: | isoform X41 |
RefSeq Acc Id: | XP_063120945 ⟸ XM_063264875 |
- Peptide Label: | isoform X40 |
RefSeq Acc Id: | XP_063120942 ⟸ XM_063264872 |
- Peptide Label: | isoform X36 |
RefSeq Acc Id: | XP_063120938 ⟸ XM_063264868 |
- Peptide Label: | isoform X32 |
RefSeq Acc Id: | XP_063120940 ⟸ XM_063264870 |
- Peptide Label: | isoform X34 |
RefSeq Acc Id: | XP_063120933 ⟸ XM_063264863 |
- Peptide Label: | isoform X27 |
RefSeq Acc Id: | XP_063120930 ⟸ XM_063264860 |
- Peptide Label: | isoform X24 |
RefSeq Acc Id: | XP_063120929 ⟸ XM_063264859 |
- Peptide Label: | isoform X23 |
RefSeq Acc Id: | XP_063120924 ⟸ XM_063264854 |
- Peptide Label: | isoform X19 |
RefSeq Acc Id: | XP_063120934 ⟸ XM_063264864 |
- Peptide Label: | isoform X28 |
RefSeq Acc Id: | XP_063120932 ⟸ XM_063264862 |
- Peptide Label: | isoform X26 |
RefSeq Acc Id: | XP_063120931 ⟸ XM_063264861 |
- Peptide Label: | isoform X25 |
RefSeq Acc Id: | XP_063120928 ⟸ XM_063264858 |
- Peptide Label: | isoform X22 |
RefSeq Acc Id: | XP_063120922 ⟸ XM_063264852 |
- Peptide Label: | isoform X17 |
RefSeq Acc Id: | XP_063120920 ⟸ XM_063264850 |
- Peptide Label: | isoform X15 |
RefSeq Acc Id: | XP_063120919 ⟸ XM_063264849 |
- Peptide Label: | isoform X14 |
RefSeq Acc Id: | XP_063120917 ⟸ XM_063264847 |
- Peptide Label: | isoform X12 |
RefSeq Acc Id: | XP_063120915 ⟸ XM_063264845 |
- Peptide Label: | isoform X10 |
RefSeq Acc Id: | XP_063120914 ⟸ XM_063264844 |
- Peptide Label: | isoform X9 |
RefSeq Acc Id: | XP_063120944 ⟸ XM_063264874 |
- Peptide Label: | isoform X39 |
RefSeq Acc Id: | XP_063120943 ⟸ XM_063264873 |
- Peptide Label: | isoform X38 |
RefSeq Acc Id: | XP_063120939 ⟸ XM_063264869 |
- Peptide Label: | isoform X33 |
RefSeq Acc Id: | XP_063120937 ⟸ XM_063264867 |
- Peptide Label: | isoform X31 |
RefSeq Acc Id: | XP_063120936 ⟸ XM_063264866 |
- Peptide Label: | isoform X30 |
RefSeq Acc Id: | XP_063120935 ⟸ XM_063264865 |
- Peptide Label: | isoform X29 |
RefSeq Acc Id: | XP_063120925 ⟸ XM_063264855 |
- Peptide Label: | isoform X20 |
RefSeq Acc Id: | XP_063120921 ⟸ XM_063264851 |
- Peptide Label: | isoform X16 |
RefSeq Acc Id: | XP_063120916 ⟸ XM_063264846 |
- Peptide Label: | isoform X11 |
RefSeq Acc Id: | XP_063120923 ⟸ XM_063264853 |
- Peptide Label: | isoform X18 |
RefSeq Acc Id: | XP_063120918 ⟸ XM_063264848 |
- Peptide Label: | isoform X13 |
RefSeq Acc Id: | XP_063120912 ⟸ XM_063264842 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | XP_063120913 ⟸ XM_063264843 |
- Peptide Label: | isoform X8 |
RefSeq Acc Id: | XP_063120911 ⟸ XM_063264841 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_063120910 ⟸ XM_063264840 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_063120909 ⟸ XM_063264839 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_063120926 ⟸ XM_063264856 |
- Peptide Label: | isoform X21 |
RefSeq Acc Id: | XP_063120927 ⟸ XM_063264857 |
- Peptide Label: | isoform X21 |
RefSeq Acc Id: | XP_063120941 ⟸ XM_063264871 |
- Peptide Label: | isoform X35 |
RefSeq Acc Id: | XP_063120951 ⟸ XM_063264881 |
- Peptide Label: | isoform X45 |
RefSeq Acc Id: | XP_063120952 ⟸ XM_063264882 |
- Peptide Label: | isoform X46 |
- UniProtKB: | A6J408 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q63312-F1-model_v2 | AlphaFold | Q63312 | 1-831 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13695911 | ||||||||
Promoter ID: | EPDNEW_R6424 | ||||||||
Type: | initiation region | ||||||||
Name: | Phldb1_1 | ||||||||
Description: | pleckstrin homology-like domain, family B, member 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | RGD:620878 | AgrOrtholog |
BioCyc Gene | G2FUF-30706 | BioCyc |
Ensembl Genes | ENSRNOG00000026985 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000047303 | ENTREZGENE |
ENSRNOT00000047303.5 | UniProtKB/TrEMBL | |
ENSRNOT00000078816.2 | UniProtKB/TrEMBL | |
ENSRNOT00000088034.2 | UniProtKB/TrEMBL | |
ENSRNOT00000096683.1 | UniProtKB/TrEMBL | |
ENSRNOT00000100408.1 | UniProtKB/TrEMBL | |
ENSRNOT00000103833 | ENTREZGENE | |
ENSRNOT00000103833.1 | UniProtKB/TrEMBL | |
ENSRNOT00000114831.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 2.30.29.30 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
2.60.200.20 | UniProtKB/TrEMBL | |
InterPro | FHA_dom | UniProtKB/TrEMBL |
PH-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PH_domain | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PHLDB1/2/3_PH | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMAD_FHA_domain | UniProtKB/TrEMBL | |
KEGG Report | rno:171434 | UniProtKB/TrEMBL |
NCBI Gene | 171434 | ENTREZGENE |
PANTHER | PLECKSTRIN HOMOLOGY-LIKE DOMAIN FAMILY B MEMBER 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PLECKSTRIN HOMOLOGY-LIKE DOMAIN, FAMILY B, MEMBER 3 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | FHA | UniProtKB/TrEMBL |
PF00169 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Phldb1 | PhenoGen |
PROSITE | PH_DOMAIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000026985 | RatGTEx |
SMART | SM00233 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | PH domain-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SMAD_FHA | UniProtKB/TrEMBL | |
UniProt | A0A0G2JTS5_RAT | UniProtKB/TrEMBL |
A0A0G2JV32 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6A9F1 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6AMV1 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6GJD6_RAT | UniProtKB/TrEMBL | |
A0A8I6GLX2_RAT | UniProtKB/TrEMBL | |
A6J408 | ENTREZGENE, UniProtKB/TrEMBL | |
D3ZNS1 | ENTREZGENE, UniProtKB/TrEMBL | |
PHLB1_RAT | UniProtKB/Swiss-Prot | |
Q3SWT3_RAT | UniProtKB/TrEMBL | |
Q63312 | ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2005-01-20 | Phldb1 | pleckstrin homology-like domain, family B, member 1 | Ll5 | LL5 protein | Symbol and Name updated | 1299863 | APPROVED |
2002-08-07 | Ll5 | LL5 protein | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
---|---|---|
gene_transcript | 2.3 kb transcript is detected in pituitary | 633318 |