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Gene: Ptpru (protein tyrosine phosphatase, receptor type, U) Rattus norvegicus

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Symbol:

Ptpru

Name:

protein tyrosine phosphatase, receptor type, U

RGD ID:

620782

Description:

Predicted to enable beta-catenin binding activity and protein tyrosine phosphatase activity. Involved in animal organ regeneration and response to glucocorticoid. Predicted to be located in cell-cell junction. Biomarker of membranous glomerulonephritis and nephrosis. Orthologous to human PTPRU (protein tyrosine phosphatase receptor type U); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

R-ptp-psi; receptor-type tyrosine-protein phosphatase U

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	149,234,624 - 149,308,857 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	149,234,624 - 149,308,833 (-)	Ensembl				GRCr8
mRatBN7.2	5	143,950,542 - 144,024,791 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	143,950,965 - 144,024,768 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	146,656,411 - 146,730,321 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	148,426,261 - 148,500,169 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	148,413,833 - 148,488,044 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	149,922,374 - 149,996,352 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	149,922,352 - 149,996,334 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	153,601,160 - 153,675,514 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	150,612,095 - 150,695,183 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	142,397,414 - 142,468,771 (-)	NCBI		Celera
RGSC_v3.1	5	150,660,034 - 150,668,570 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Dwarfism (ISO)

Experimental Diabetes Mellitus (IEP)

hypertension (ISO)

membranous glomerulonephritis (IEP)

nephrosis (IEP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,4'-trichlorobiphenyl (ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

amitrole (EXP)

ammonium chloride (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bromobenzene (EXP)

Butylbenzyl phthalate (ISO)

butyric acid (ISO)

cadmium atom (ISO)

caffeine (ISO)

carbon nanotube (ISO)

choline (ISO)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

Cuprizon (EXP)

decabromodiphenyl ether (EXP)

dexamethasone (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

dicrotophos (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

genistein (ISO)

gentamycin (EXP)

glycidol (EXP)

ketamine (EXP)

L-methionine (ISO)

maneb (ISO)

mono(2-ethylhexyl) phthalate (ISO)

naled (ISO)

Nutlin-3 (ISO)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

paraquat (ISO)

PCB138 (ISO)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

phytoestrogen (ISO)

quercetin (ISO)

quercitrin (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sunitinib (ISO)

tetrachloromethane (EXP)

thiram (ISO)

titanium dioxide (ISO)

triadimefon (EXP)

triclosan (ISO)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

animal organ regeneration (IEP)

cell adhesion (IEA)

cell differentiation (IEA)

homotypic cell-cell adhesion (ISO)

negative regulation of canonical Wnt signaling pathway (IEA,ISO)

negative regulation of cell migration (IEA,ISO)

negative regulation of cell population proliferation (IEA,ISO)

neuron differentiation (NAS)

neuron projection development (IBA)

positive regulation of cell-cell adhesion mediated by cadherin (IEA,ISO)

protein dephosphorylation (ISO)

protein localization to cell surface (IEA,ISO)

response to glucocorticoid (IEP)

signal transduction (IBA)

Cellular Component

anchoring junction (IEA)

cell-cell junction (IEA,ISO)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

beta-catenin binding (IEA,ISO)

hydrolase activity (IEA)

identical protein binding (IEA,ISO)

phosphoprotein phosphatase activity (IEA)

protein binding (ISO)

protein tyrosine phosphatase activity (IBA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Early changes in gene expression that influence the course of primary glomerular disease.	Clement LC, etal., Kidney Int. 2007 Aug;72(3):337-47. Epub 2007 Apr 25.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Gene expressions of protein tyrosine phosphatases in regenerating rat liver and rat ascites hepatoma cells.	Kitamura T, etal., Jpn J Cancer Res. 1995 Sep;86(9):811-8.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Comprehensive gene review and curation	RGD comprehensive gene curation
10.	Reduction in podocyte density as a pathologic feature in early diabetic nephropathy in rodents: prevention by lipoic acid treatment.	Siu B, etal., BMC Nephrol. 2006 Mar 15;7:6.
11.	RPTP delta and the novel protein tyrosine phosphatase RPTP psi are expressed in restricted regions of the developing central nervous system.	Sommer L, etal., Dev Dyn 1997 Jan;208(1):48-61.
12.	Altered podocyte structure in GLEPP1 (Ptpro)-deficient mice associated with hypertension and low glomerular filtration rate.	Wharram BL, etal., J Clin Invest. 2000 Nov;106(10):1281-90.

Additional References at PubMed

PMID:9054423	PMID:12501215	PMID:15978577	PMID:16574648

Genomics

Comparative Map Data

Ptpru
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	149,234,624 - 149,308,857 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	5	149,234,624 - 149,308,833 (-)	Ensembl				GRCr8
mRatBN7.2	5	143,950,542 - 144,024,791 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	143,950,965 - 144,024,768 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	5	146,656,411 - 146,730,321 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	148,426,261 - 148,500,169 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	148,413,833 - 148,488,044 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	149,922,374 - 149,996,352 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	149,922,352 - 149,996,334 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	5	153,601,160 - 153,675,514 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	5	150,612,095 - 150,695,183 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	5	142,397,414 - 142,468,771 (-)	NCBI		Celera
RGSC_v3.1	5	150,660,034 - 150,668,570 (-)	NCBI
Cytogenetic Map	5	q36	NCBI

PTPRU
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	29,236,522 - 29,326,800 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	29,236,505 - 29,326,813 (+)	Ensembl			hg38	GRCh38
GRCh37	1	29,563,034 - 29,653,312 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	29,435,634 - 29,525,903 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	1	29,383,643 - 29,473,927	NCBI
Celera	1	27,959,180 - 28,049,910 (+)	NCBI		Celera
Cytogenetic Map	1	p35.3	NCBI
HuRef	1	27,814,346 - 27,905,164 (+)	NCBI		HuRef
CHM1_1	1	29,678,424 - 29,768,677 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	29,079,179 - 29,169,454 (+)	NCBI		T2T-CHM13v2.0

Ptpru
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	131,495,768 - 131,565,617 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	131,495,768 - 131,565,599 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	4	131,768,457 - 131,838,306 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	131,768,457 - 131,838,288 (-)	Ensembl			mm10	GRCm38
MGSCv37	4	131,324,372 - 131,394,193 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	4	131,040,533 - 131,110,354 (-)	NCBI		MGSCv36	mm8
Celera	4	129,928,568 - 129,998,810 (-)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	64.5	NCBI

Ptpru
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	8,223,692 - 8,296,769 (+)	Ensembl
ChiLan1.0	NW_004955452	8,223,773 - 8,296,769 (+)	NCBI	ChiLan1.0	ChiLan1.0

PTPRU
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	197,516,640 - 197,606,767 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	196,635,952 - 196,726,070 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	28,507,078 - 28,597,154 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	29,556,675 - 29,623,247 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	29,551,912 - 29,622,104 (+)	Ensembl			panPan2	panpan1.1

PTPRU
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	71,284,979 - 71,363,253 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	71,285,851 - 71,363,691 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	67,861,226 - 67,939,839 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	71,844,918 - 71,923,499 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	71,844,933 - 71,923,492 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	68,673,740 - 68,752,383 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	69,681,824 - 69,760,389 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	70,679,504 - 70,758,203 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ptpru
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	47,268,246 - 47,438,405 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	13,197,786 - 13,263,362 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	13,197,786 - 13,263,187 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PTPRU
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	86,137,737 - 86,228,145 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	86,137,743 - 86,228,148 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	80,024,234 - 80,106,252 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PTPRU
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	103,497,681 - 103,586,494 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	103,498,839 - 103,586,348 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666033	12,943,572 - 13,032,266 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ptpru
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	12,994,521 - 13,073,251 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624764	12,994,562 - 13,072,723 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ptpru
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	26,416,223 - 26,490,319 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ptpru
310 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	114
Count of miRNA genes:	84
Interacting mature miRNAs:	102
Transcripts:	ENSRNOT00000036148
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	102105698	152749382	Rat
10053720	Scort26	Serum corticosterone level QTL 26	2.06	0.0147	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	5	130249266	172190305	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	44924861	153890773	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	116702075	161702075	Rat
1354583	Despr3	Despair related QTL3	4.98	0.0002	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	5	132930505	172190305	Rat
61444	Strs2	Sensitivity to stroke QTL 2	4.7		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	5	141212838	172190305	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	99905133	172190305	Rat
70156	Niddm30	Non-insulin dependent diabetes mellitus QTL 30	3.98		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	5	134369218	156289444	Rat
8552908	Pigfal4	Plasma insulin-like growth factor 1 level QTL 4	6.6		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	133789363	172190305	Rat
1331803	Rf32	Renal function QTL 32	2.798		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	134369199	172190305	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	65089051	166764498	Rat
7794791	Mcs33	Mammary carcinoma susceptibility QTL 33	1.93		mammary gland integrity trait (VT:0010552)	mammary tumor incidence/prevalence measurement (CMO:0000946)	5	136631198	172190305	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	112142946	157142946	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	112142946	157142946	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	110770739	155770739	Rat
1598861	Cm64	Cardiac mass QTL 64	2.9		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	133081618	172190305	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	51657967	166600247	Rat
631505	Bp103	Blood pressure QTL 103	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	138002522	170842766	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	112142946	157142946	Rat
1581505	Rf54	Renal function QTL 54			kidney physiology trait (VT:0002136)	kidney 20-HETE level (CMO:0001854)	5	133270647	172190305	Rat
2317753	Glom24	Glomerulus QTL 24	3.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	5	141764300	172190305	Rat
8694169	Bw148	Body weight QTL 148	5	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	133789363	172190305	Rat
1331721	Bp210	Blood pressure QTL 210	3.413		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	5	148093485	172129029	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	125969677	172190305	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55124766	172190305	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	111236572	156236572	Rat
724525	Bp147	Blood pressure QTL 147	4.3	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	131708216	172190305	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	114131300	159131300	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	125969677	156302135	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	112142946	157142946	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	116702075	161702075	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	112142946	157142946	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	116702075	161702075	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	74335621	156302135	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	116702075	161702075	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	114131300	159131300	Rat
1598819	Bp292	Blood pressure QTL 292	4.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	133081618	172190305	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	104262817	153890625	Rat

Markers in Region

AW535311

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	144,026,523 - 144,026,691 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	149,998,090 - 149,998,257	NCBI	Rnor6.0
Rnor_5.0	5	153,677,269 - 153,677,436	UniSTS	Rnor5.0
RGSC_v3.4	5	150,696,939 - 150,697,106	UniSTS	RGSC3.4
Celera	5	142,470,527 - 142,470,694	UniSTS
RH 3.4 Map	5	988.5	UniSTS
Cytogenetic Map	5	q36	UniSTS

RH134910

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	143,950,703 - 143,950,905 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	149,922,536 - 149,922,737	NCBI	Rnor6.0
Rnor_5.0	5	153,601,322 - 153,601,523	UniSTS	Rnor5.0
RGSC_v3.4	5	150,611,834 - 150,612,035	UniSTS	RGSC3.4
Celera	5	142,397,153 - 142,397,354	UniSTS
RH 3.4 Map	5	964.7	UniSTS
Cytogenetic Map	5	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	42	59	6	306	142	11	140	81	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001415049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008764130	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593122	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039109156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063287071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U66566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000036148 ⟹ ENSRNOP00000030956

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	149,234,624 - 149,308,833 (-)	Ensembl
mRatBN7.2 Ensembl	5	143,950,965 - 144,024,768 (-)	Ensembl
Rnor_6.0 Ensembl	5	149,922,797 - 149,996,334 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000091637 ⟹ ENSRNOP00000072635

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	149,234,624 - 149,294,592 (-)	Ensembl
mRatBN7.2 Ensembl	5	143,950,965 - 144,020,870 (-)	Ensembl
Rnor_6.0 Ensembl	5	149,922,352 - 149,987,910 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000158638 ⟹ ENSRNOP00000104366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	5	149,234,624 - 149,300,425 (-)	Ensembl

RefSeq Acc Id:

NM_001191575 ⟹ NP_001178504

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,624 - 149,308,833 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,754 (-)	NCBI
Rnor_6.0	5	149,922,797 - 149,996,334 (-)	NCBI
Rnor_5.0	5	153,601,160 - 153,675,514 (-)	NCBI
Celera	5	142,397,414 - 142,468,771 (-)	NCBI

Sequence:

show sequence

CTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACCGCTCCCGCTCGCCTTGGG
CTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTCCAGGACCCAGGCGGCGGC
GCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCTTCCAGTTCTGCGCGCCCG
AGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGACCCGGTTGTGCCCTGCGA
GTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGGATCCACCCTGGCACCCGG
ACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTTCCCAGCATGCTCCAGGCC
AGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCACTGTGTGCAGTTCAGCTA
CTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTCTATGTGCGTGTGAACGGG
GGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCCGTCAGTGGCATCAGGCTG
AACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTTTGAGGCTCTCATCTCCCC
AGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGCCATCCCTGCGCGAAGGCC
CCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGAATGCATCCTTCCAATGCA
TGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCGGCAGAGTGGGGTGCTAGT
GCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCCACTTTTCCACTGGCCTCT
GTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCCCGCGCGGTGCTGGAGTCT
CCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGCGCCCCCACAGCTGCTGCG
TGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATCATTGGCGACGGGCCGATC
GTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCGAGGTTCACGCTGTCAACC
TGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGAGATCAGCGTGCTGCTTAC
CCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTCAGCCGGACCAAGTGCGCA
GAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGGCTCGTCAGCTGACCCTGC
AGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGCTGTGTCCCTTTGTTATCA
CTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTGAAGATGGAGCGGGGCGCC
AGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACGTGCGTCTGATTCTCACAA
ACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGATGAAGATGTGCCTGGTGG
GATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATCTTTCTCAAGTGGGAGGAG
CCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACCAAAGCATTGAGTCCTCAG
ACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACTCCGAAATGAGACTTACCA
TGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTGCGTGCTCGTACAAGCAAG
GGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAGCACCCAGCTTTGATTATG
CCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGTGCTGTTGAGGCCGGCCCA
GGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAAGAGCGGCCACGGCGCTTG
CGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCTTTGAGACGGCCCTGGCTC
GCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCTGCTTGAGGCCATGCCCTT
CACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCGCTTGAGCCCAGGAAGGCC
TACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCCGACTGAACTGCATCCGAA
TTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGTGTCCCAGAGGTCGGAGGA
GATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTCATTCTCCTCCTGGGCGCC
ATCATTATCATCATCCGTAAAGGGAGGGACCGCTATGCCTACTCTTACTACCCGAAGCCAGTGA
ACATGGCAAAAGCCACGGTCAACTATCGCCAGGAGAAGACCCACATGATGACTGCTGTGGACCG
TAGCTTCACAGATCAGAGCACTCTGCAGGAGGATGAGCGGCTGGGCCTGTCCTTCATGGATGCT
CCTGGCTACAGCCCTCGGGGAGACCAGAGAAGCAGTGGGGTCACTGAGGCCAGTAGCCTCCTGG
GGGGCTCTCCTCGGCGCCCCTGTGGCCGGAAGGGCTCCCCGTATCACACAGGGCAGCTTCACCC
TGCAGTACGAGTGGCTGACCTGCTGCAGCACATCAACCAGATGAAGACAGCCGAGGGCTACGGC
TTCAAGCAAGAGTACGAGAGTTTCTTTGAAGGCTGGGATGCCACCAAGAAGAAAGACAAGCTGA
AGAGCGGCCGGCAGGAGCCAGTGTCTGCCTATGACCGACACCGAGTGAAGCTGCACCCGATGCT
GGGAGACCCTGATGCCGACTACATCTCTGCCAACTACATAGACGGCTACCACAGGTCAAACCAC
TTCATAGCCACTCAAGGGCCAAAGCCTGAGATGATCTACGACTTCTGGCGCATGGTGTGGCAGG
AGCAGTGTGTGAGCGTCGTCATGATCAGCAAGCTGGTAGAGGTGGGCAGGGTAAAGTGCTCTCG
ATACTGGCCCGAGGACTCAGACATGTATGGGGACATCAAGATCACGCTGGTAAAGACAGAGACA
CTGGCTGAGTACGTGGTGCGCACCTTTGCCCTGGAGCGGAGAGGTTACTCAGCCCGGCATGAGG
TCCGCCAGTTCCACTTCACAGCGTGGCCAGAGCATGGTGTTCCCTACCATGCCACGGGGCTGCT
GGCCTTCATCCGGCGCGTGAAGGCTTCCACTCCACCTGATGCTGGGCCTGTTGTCATTCACTGC
AGTGCAGGCACTGGCCGCACAGGCTGCTACATCGTCTTGGATGTGATGCTGGACATGGCTGAGT
GTGAGGGGGTCGTGGACATTTACAACTGCGTGAAGACCCTCTGTTCCCGGCGGGTCAACATGAT
CCAGACCGAGGAACAATACATCTTCATCCACGATGCGATTCTGGAGGCCTGCCTGTGTGGGGAG
ACCACCATCCCTGTCAATGAGTTCAAGGCCACCTATAGGGAGATGATCCGCATTGACCCTCAGA
GTAACTCCTCCCAGCTTCGGGAAGAGTTCCAGACACTGAACTCGGTCACACCGCCGCTGGACGT
GGAGGAGTGTAGCATTGCCCTGCTGCCCCGGAATCGAGACAAGAACCGTAGCATGGACGTGCTG
CCGCCAGACCGCTGCCTGCCCTTCCTCATCTCCAGTGATGGGGACCCCAACAACTACATCAATG
CAGCCCTAACTGATAGCTACACACGGAGCGCCGCCTTCATCGTGACCCTGCACCCACTGCAGAG
TACCACACCCGACTTCTGGCGGCTGGTCTACGACTATGGGTGCACCTCCATTGTGATGCTCAAC
CAGCTTAACCAGTCCAACTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAACCAGGCAGACAGC
AGTATGGCCTCATGGAGGTGGAGTTTGTGTCTGGCACAGCAAACGAGGATCTGGTGTCCCGAGT
GTTCCGGGTGCAGAACTCTTCAAGGCTGCAGGAGGGCCACCTGCTGGTTCGTCACTTTCAGTTC
CTGCGTTGGTCTGCTTATCGGGACACGCCTGACTCCAGGAAGGCCTTCCTGCACCTGTTGGCTG
AGGTGGACAAGTGGCAGGCGGAGAGTGGAGATGGGCGCACCGTGGTGCATTGTCTCAATGGCGG
TGGCCGCAGTGGCACCTTCTGCGCCTGTGCAACGGTCTTGGAAATGATCCGCTGTCACAGCCTG
GTGGATGTTTTCTTTGCTGCCAAAACGCTTCGGAACTACAAGCCCAATATGGTGGAGACCATGG
ATCAATACCATTTCTGCTACGATGTGGCCCTGGAGTACCTGGAGGCTCTGGAGTTGAGATAGCA
GGCGCCTGGACTGGGGCACCCAGTGAACACCCAGGGCATGGCCCATCATTCCAGACTGGTGAGG
AGGGCCTGTGGCCCCAACTTTGCTCAGCCATAATCCTACAGGGAGAACACAGGAGCGGATGCTG
CACCGTCTCGGTGACCCCCACGGGAAGGCTGCAGACCAAGGAGGAGCTTTGCAAGACTGTTTCA
GCCCCACCTCCAGAGGGCCCTGTAGAACTGTGCCGAGAAGCTGGCCTGGGACAGTGGCACTGGC
CAAAATAGCTAGTGCTGGGGACCCCAGGCTAGACCTTCCACTCCATTACAGTCCTTGGCAAGAA
ACGAATGAGGATCTGCAGAGAGTGTCCAAGGTTTGCACCCAGTGTGGTCCCTTTGGCACGTGGC
GGAAGCTCACTGGGGCTTGGCTGGGGCTGAGTCCCAGCTGGCTGAGCCCCCGAGAGTCCTGAAG
CCGGGACTCCTCCTTGTCTTGGCAGTGGGACACACTGAGCATCCTGCAGCTCCTTTCTCCATCC
CACTGCCCTTGCAGACCCAGGGGTGCTTTGCTTGACAATGCTTTCCTCCTGCTTCTGAGCTTTT
CCTGCAACAGGAGCCTCCCTCCTGGGCTCCATCCCTGCCTGGCCCAGTATATGCAGAATGATAC
ACTTCAGCT

hide sequence

RefSeq Acc Id:

NM_001415049 ⟹ NP_001401978

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,624 - 149,308,833 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,754 (-)	NCBI

RefSeq Acc Id:

XM_006238998 ⟹ XP_006239060

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,849 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,788 (-)	NCBI
Rnor_6.0	5	149,922,374 - 149,996,350 (-)	NCBI
Rnor_5.0	5	153,601,160 - 153,675,514 (-)	NCBI

Sequence:

show sequence

CGTTCGGGCTCCCGCTCTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACCGC
TCCCGCTCGCCTTGGGCTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTCCA
GGACCCAGGCGGCGGCGCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCTTC
CAGTTCTGCGCGCCCGAGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGACC
CGGTTGTGCCCTGCGAGTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGGAT
CCACCCTGGCACCCGGACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTTCC
CAGCATGCTCCAGGCCAGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCACT
GTGTGCAGTTCAGCTACTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTCTA
TGTGCGTGTGAACGGGGGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCCGT
CAGTGGCATCAGGCTGAACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTTTG
AGGCTCTCATCTCCCCAGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGCCA
TCCCTGCGCGAAGGCCCCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGAAT
GCATCCTTCCAATGCATGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCGGC
AGAGTGGGGTGCTAGTGCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCCAC
TTTTCCACTGGCCTCTGTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCCCG
CGCGGTGCTGGAGTCTCCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGCGC
CCCCACAGCTGCTGCGTGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATCAT
TGGCGACGGGCCGATCGTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCGAG
GTTCACGCTGTCAACCTGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGAGA
TCAGCGTGCTGCTTACCCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTCAG
CCGGACCAAGTGCGCAGAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGGCT
CGTCAGCTGACCCTGCAGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGCTG
TGTCCCTTTGTTATCACTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTGAA
GATGGAGCGGGGCGCCAGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACGTG
CGTCTGATTCTCACAAACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGATG
AAGATGTGCCTGGTGGGATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATCTT
TCTCAAGTGGGAGGAGCCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACCAA
AGCATTGAGTCCTCAGACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACTCC
GAAATGAGACTTACCATGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTGCG
TGCTCGTACAAGCAAGGGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAGCA
CCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGTGC
TGTTGAGGCCGGCCCAGGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAAGA
GCGGCCACGGCGCTTGCGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCTTT
GAGACGGCCCTGGCTCGCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCTGC
TTGAGGCCATGCCCTTCACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCGCT
TGAGCCCAGGAAGGCCTACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCCGA
CTGAACTGCATCCGAATTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGTGT
CCCAGAGGTCGGAGGAGATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTCAT
TCTCCTCCTGGGCGCCATCATTATCATCATCCGTAAAGGGAAGCCAGTGAACATGGCAAAAGCC
ACGGTCAACTATCGCCAGGAGAAGACCCACATGATGACTGCTGTGGACCGTAGCTTCACAGATC
AGAGCACTCTGCAGGAGGATGAGCGGCTGGGCCTGTCCTTCATGGATGCTCCTGGCTACAGCCC
TCGGGGAGACCAGAGAAGCAGTGGGGTCACTGAGGCCAGTAGCCTCCTGGGGGGCTCTCCTCGG
CGCCCCTGTGGCCGGAAGGGCTCCCCGTATCACACAGGGCAGCTTCACCCTGCAGTACGAGTGG
CTGACCTGCTGCAGCACATCAACCAGATGAAGACAGCCGAGGGCTACGGCTTCAAGCAAGAGTA
CGAGAGTTTCTTTGAAGGCTGGGATGCCACCAAGAAGAAAGACAAGCTGAAGAGCGGCCGGCAG
GAGCCAGTGTCTGCCTATGACCGACACCGAGTGAAGCTGCACCCGATGCTGGGAGACCCTGATG
CCGACTACATCTCTGCCAACTACATAGACGGCTACCACAGGTCAAACCACTTCATAGCCACTCA
AGGGCCAAAGCCTGAGATGATCTACGACTTCTGGCGCATGGTGTGGCAGGAGCAGTGTGTGAGC
GTCGTCATGATCAGCAAGCTGGTAGAGGTAAAGTGCTCTCGATACTGGCCCGAGGACTCAGACA
TGTATGGGGACATCAAGATCACGCTGGTAAAGACAGAGACACTGGCTGAGTACGTGGTGCGCAC
CTTTGCCCTGGAGCGGAGAGGTTACTCAGCCCGGCATGAGGTCCGCCAGTTCCACTTCACAGCG
TGGCCAGAGCATGGTGTTCCCTACCATGCCACGGGGCTGCTGGCCTTCATCCGGCGCGTGAAGG
CTTCCACTCCACCTGATGCTGGGCCTGTTGTCATTCACTGCAGTGCAGGCACTGGCCGCACAGG
CTGCTACATCGTCTTGGATGTGATGCTGGACATGGCTGAGTGTGAGGGGGTCGTGGACATTTAC
AACTGCGTGAAGACCCTCTGTTCCCGGCGGGTCAACATGATCCAGACCGAGGAACAATACATCT
TCATCCACGATGCGATTCTGGAGGCCTGCCTGTGTGGGGAGACCACCATCCCTGTCAATGAGTT
CAAGGCCACCTATAGGGAGATGATCCGCATTGACCCTCAGAGTAACTCCTCCCAGCTTCGGGAA
GAGTTCCAGACACTGAACTCGGTCACACCGCCGCTGGACGTGGAGGAGTGTAGCATTGCCCTGC
TGCCCCGGAATCGAGACAAGAACCGTAGCATGGACGTGCTGCCGCCAGACCGCTGCCTGCCCTT
CCTCATCTCCAGTGATGGGGACCCCAACAACTACATCAATGCAGCCCTAACTGATAGCTACACA
CGGAGCGCCGCCTTCATCGTGACCCTGCACCCACTGCAGAGTACCACACCCGACTTCTGGCGGC
TGGTCTACGACTATGGGTGCACCTCCATTGTGATGCTCAACCAGCTTAACCAGTCCAACTCCGC
CTGGCCCTGCCTGCAGTACTGGCCAGAACCAGGCAGACAGCAGTATGGCCTCATGGAGGTGGAG
TTTGTGTCTGGCACAGCAAACGAGGATCTGGTGTCCCGAGTGTTCCGGGTGCAGAACTCTTCAA
GGCTGCAGGAGGGCCACCTGCTGGTTCGTCACTTTCAGTTCCTGCGTTGGTCTGCTTATCGGGA
CACGCCTGACTCCAGGAAGGCCTTCCTGCACCTGTTGGCTGAGGTGGACAAGTGGCAGGCGGAG
AGTGGAGATGGGCGCACCGTGGTGCATTGTCTCAATGGCGGTGGCCGCAGTGGCACCTTCTGCG
CCTGTGCAACGGTCTTGGAAATGATCCGCTGTCACAGCCTGGTGGATGTTTTCTTTGCTGCCAA
AACGCTTCGGAACTACAAGCCCAATATGGTGGAGACCATGGATCAATACCATTTCTGCTACGAT
GTGGCCCTGGAGTACCTGGAGGCTCTGGAGTTGAGATAGCAGGCGCCTGGACTGGGGCACCCAG
TGAACACCCAGGGCATGGCCCATCATTCCAGACTGGTGAGGAGGGCCTGTGGCCCCAACTTTGC
TCAGCCATAATCCTACAGGGAGAACACAGGAGCGGATGCTGCACCGTCTCGGTGACCCCCACGG
GAAGGCTGCAGACCAAGGAGGAGCTTTGCAAGACTGTTTCAGCCCCACCTCCAGAGGGCCCTGT
AGAACTGTGCCGAGAAGCTGGCCTGGGACAGTGGCACTGGCCAAAATAGCTAGTGCTGGGGACC
CCAGGCTAGACCTTCCACTCCATTACAGTCCTTGGCAAGAAACGAATGAGGATCTGCAGAGAGT
GTCCAAGGTTTGCACCCAGTGTGGTCCCTTTGGCACGTGGCGGAAGCTCACTGGGGCTTGGCTG
GGGCTGAGTCCCAGCTGGCTGAGCCCCCGAGAGTCCTGAAGCCGGGACTCCTCCTTGTCTTGGC
AGTGGGACACACTGAGCATCCTGCAGCTCCTTTCTCCATCCCACTGCCCTTGCAGACCCAGGGG
TGCTTTGCTTGACAATGCTTTCCTCCTGCTTCTGAGCTTTTCCTGCAACAGGAGCCTCCCTCCT
GGGCTCCATCCCTGCCTGGCCCAGTATATGCAGAATGATACACTTCAGCTCCTTCTTCCCTAGC
CTTCAGGTCGCCATGGCTCGGTCCTGCTCAGCTTGGGCCTGTGACAATCCACAAGGCTGACTCA
CAGCCCCCTGGGGTGGAGGTCCCTGTGGCTCTTGGTGAGGTGGTCACTGGATCAGGGTGGAGTA
GAGCAAGGCTGGGGCCAGCTCCCAGAGTTCAGAGAAAGAAGGGGTGCTTTGGGATGGGGACCAG
TGCTTTCTTTCTTTGTTGTTGTTATTTTGTTTTTTGATGGGAGGGTAGGAAGTTCTCTTTATAA
TGGGGTAGGCCACACCCCCATTTCGTGCCTCAATTTCCCCATCTGTAAACTGTAGATATGACTA
CTGACCTACCTCACAGGGGGCTGTGGGGAGGTGTAAGGTAATGTTTGTAAAGCGCTTTGTAAAT
AAATGTGCTCTCTGAATGCCACCCA

hide sequence

RefSeq Acc Id:

XM_008764130 ⟹ XP_008762352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,265,751 - 149,308,849 (-)	NCBI
mRatBN7.2	5	143,981,669 - 144,024,791 (-)	NCBI
Rnor_6.0	5	149,953,604 - 149,996,352 (-)	NCBI

Sequence:

show sequence

CTCGTTCGGGCTCCCGCTCTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACC
GCTCCCGCTCGCCTTGGGCTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTC
CAGGACCCAGGCGGCGGCGCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCT
TCCAGTTCTGCGCGCCCGAGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGA
CCCGGTTGTGCCCTGCGAGTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGG
ATCCACCCTGGCACCCGGACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTT
CCCAGCATGCTCCAGGCCAGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCA
CTGTGTGCAGTTCAGCTACTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTC
TATGTGCGTGTGAACGGGGGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCC
GTCAGTGGCATCAGGCTGAACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTT
TGAGGCTCTCATCTCCCCAGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGC
CATCCCTGCGCGAAGGCCCCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGA
ATGCATCCTTCCAATGCATGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCG
GCAGAGTGGGGTGCTAGTGCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCC
ACTTTTCCACTGGCCTCTGTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCC
CGCGCGGTGCTGGAGTCTCCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGC
GCCCCCACAGCTGCTGCGTGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATC
ATTGGCGACGGGCCGATCGTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCG
AGGTTCACGCTGTCAACCTGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGA
GATCAGCGTGCTGCTTACCCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTC
AGCCGGACCAAGTGCGCAGAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGG
CTCGTCAGCTGACCCTGCAGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGC
TGTGTCCCTTTGTTATCACTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTG
AAGATGGAGCGGGGCGCCAGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACG
TGCGTCTGATTCTCACAAACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGA
TGAAGATGTGCCTGGTGGGATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATC
TTTCTCAAGTGGGAGGAGCCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACC
AAAGCATTGAGTCCTCAGACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACT
CCGAAATGAGACTTACCATGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTG
CGTGCTCGTACAAGCAAGGGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAG
CACCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGT
GCTGTTGAGGCCGGCCCAGGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAA
GAGCGGCCACGGCGCTTGCGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCT
TTGAGACGGCCCTGGCTCGCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCT
GCTTGAGGCCATGCCCTTCACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCG
CTTGAGCCCAGGAAGGCCTACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCC
GACTGAACTGCATCCGAATTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGT
GTCCCAGAGGTCGGAGGAGATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTC
ATTCTCCTCCTGGGCGCCATCATTATCATCATCCGTAAAGGGCATGAGCAGACCGTGGTGGCTC
GCGCACCTTAACTGAGCCCTAGAGGTGTCAGTGGACCTGCCCAAGGTCACCCTAGGAGCCAGAG
GCAGAGCCAGCCTCATCCTTCTCCATCTGGACTCTGGCTTCTGTATCCTTGCTGCTGCCAGGCT
GGGCACACACTGGCTGGTTGGCAGAGGCTCTCTGGGCTGCCGGGAGCAGATAAGTAGGATCCAG
GGAGAGGGGACAAAAAGCTGGCTAACGCCATCAGCAATGGAGATAGGGTGTATCTGTGGAATGG
CGATTGCATGTGTGGGATGGCCTATCCTGGGCTCAGGTTCAGATATTCTTTTTCTTCTGAAGTT
CCTCCCAGAAGAGTGTCGTGAGACACAGTATTTTTAATGATCACTTAATGAGGAAGGACTGCGT
GCCAGGAACGTTAGCTATTGAGTACCAGAATGTGCCAGACAAGGTTCTGGCACTTGGGATCTAT
CCTAGAACATTTCCTTCTTGGATCCCGGCAAGCAGCCGTCCGACTCCCTTTTAACTGACAAGAA
GCTGTAATTAAAGTGAGTTGCCCGTGTCATTAGGTAAAGTGGGAGGGTGTGCTCTGAACTCAGG
CCTCACTGTGAATGGGAAAGCCTCGTTGGAGGCTCCCTGCCGATGGCAGATCTCTGCACTTGTG
CTCAGCAGAGGTCCCAAGAGGGCCCTCCAAGTAGGGTGCAGGTGTAGAGGCTGTAAGTGGGACT
GCCGGAATGTGTTTGAGTCCCTAGGAATCTCTCCTGCAGGGAGAGAATGGGCTATGTGGTATAT
CATCCTTCCTCCTTGCAAACAGGGCCTCTGGTGAGGACAAGGTGGGTCACAGATGTAGTCAGGG
TGTCACTGGGAGGCAGCCTCCATTAGACAGTCACTAAATCATATATCAGCCCCTGTCCAGGCTA
TCTCTGAAGCCCCTAAGACTGTTTCCGTCCCTAGCACCACGCTTTGTGCTTTCCCATCATGCTG
TCCCATAACTGTGTCCTCTGGTCCTGTCCTTGGGGAGCCAGCACTCTCCTCAGGGCTCCCCCAG
TTTGCATTTTGGTGTGGGTTGGAACAGAGCAGGATCTGAATAGGTTCCAGAACAGCCTGTGTTT
CAAACATCAAATGGACAGAGTAGGGGGTTTGGTGCCAATCCCTGGGCTTGATGGGGCCTTGGGA
GGGAGTTCCTGGGCCAGGGTCCTGAGATAAGTATTATGAGATGGGGGACTCTGGCATTTGCCAT
GACAACCTGTGACTTGATGTCCTCATCTGTGAAATGGGATTTTTTTTCAGTGTTGGAGCGTAAG
CTCTGAGCCTTGGAGCACACTAGGCAAGTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTA
ACCAATCAGCAGCAGCCTTAATTCAATGCTTCTCATACACGCATTGGGTGTCCAGTGAGAGGGT
GGCCTAGTTCCTTCATGAGCCCCATTGGCAGGGTCAGTCACAGTGGGAAGAGTGAGCCCTAGGC
TTGCCTAGGTGTCCTGCCGGGGCCTCAGTTTCCTGCTGGGGATTCACCCTGTCTCTCCTTGTCC
TTAGCTAGTCCCTCCCTTTGC

hide sequence

RefSeq Acc Id:

XM_017593120 ⟹ XP_017448609

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,857 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,789 (-)	NCBI
Rnor_6.0	5	149,922,374 - 149,996,350 (-)	NCBI

Sequence:

show sequence

CGTTCGGGCTCCCGCTCTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACCGC
TCCCGCTCGCCTTGGGCTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTCCA
GGACCCAGGCGGCGGCGCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCTTC
CAGTTCTGCGCGCCCGAGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGACC
CGGTTGTGCCCTGCGAGTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGGAT
CCACCCTGGCACCCGGACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTTCC
CAGCATGCTCCAGGCCAGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCACT
GTGTGCAGTTCAGCTACTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTCTA
TGTGCGTGTGAACGGGGGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCCGT
CAGTGGCATCAGGCTGAACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTTTG
AGGCTCTCATCTCCCCAGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGCCA
TCCCTGCGCGAAGGCCCCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGAAT
GCATCCTTCCAATGCATGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCGGC
AGAGTGGGGTGCTAGTGCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCCAC
TTTTCCACTGGCCTCTGTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCCCG
CGCGGTGCTGGAGTCTCCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGCGC
CCCCACAGCTGCTGCGTGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATCAT
TGGCGACGGGCCGATCGTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCGAG
GTTCACGCTGTCAACCTGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGAGA
TCAGCGTGCTGCTTACCCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTCAG
CCGGACCAAGTGCGCAGAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGGCT
CGTCAGCTGACCCTGCAGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGCTG
TGTCCCTTTGTTATCACTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTGAA
GATGGAGCGGGGCGCCAGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACGTG
CGTCTGATTCTCACAAACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGATG
AAGATGTGCCTGGTGGGATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATCTT
TCTCAAGTGGGAGGAGCCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACCAA
AGCATTGAGTCCTCAGACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACTCC
GAAATGAGACTTACCATGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTGCG
TGCTCGTACAAGCAAGGGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAGCA
CCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGTGC
TGTTGAGGCCGGCCCAGGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAAGA
GCGGCCACGGCGCTTGCGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCTTT
GAGACGGCCCTGGCTCGCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCTGC
TTGAGGCCATGCCCTTCACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCGCT
TGAGCCCAGGAAGGCCTACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCCGA
CTGAACTGCATCCGAATTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGTGT
CCCAGAGGTCGGAGGAGATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTCAT
TCTCCTCCTGGGCGCCATCATTATCATCATCCGTAAAGGGAGGGACCGCTATGCCTACTCTTAC
TACCCGAAGCCAGTGAACATGGCAAAAGCCACGGTCAACTATCGCCAGGAGAAGACCCACATGA
TGACTGCTGTGGACCGTAGCTTCACAGATCAGAGCACTCTGCAGGAGGATGAGCGGCTGGGCCT
GTCCTTCATGGATGCTCCTGGCTACAGCCCTCGGGGAGACCAGAGAAGCAGTGGGGTCACTGAG
GCCAGTAGCCTCCTGGGGGGCTCTCCTCGGCGCCCCTGTGGCCGGAAGGGCTCCCCGTATCACA
CAGGGCAGCTTCACCCTGCAGTACGAGTGGCTGACCTGCTGCAGCACATCAACCAGATGAAGAC
AGCCGAGGGCTACGGCTTCAAGCAAGAGTACGAGAGTTTCTTTGAAGGCTGGGATGCCACCAAG
AAGAAAGACAAGCTGAAGAGCGGCCGGCAGGAGCCAGTGTCTGCCTATGACCGACACCGAGTGA
AGCTGCACCCGATGCTGGGAGACCCTGATGCCGACTACATCTCTGCCAACTACATAGACATTCG
GATAAACCGACAAGGCTACCACAGGTCAAACCACTTCATAGCCACTCAAGGGCCAAAGCCTGAG
ATGATCTACGACTTCTGGCGCATGGTGTGGCAGGAGCAGTGTGTGAGCGTCGTCATGATCAGCA
AGCTGGTAGAGGTGGGCAGGGTAAAGTGCTCTCGATACTGGCCCGAGGACTCAGACATGTATGG
GGACATCAAGATCACGCTGGTAAAGACAGAGACACTGGCTGAGTACGTGGTGCGCACCTTTGCC
CTGGAGCGGAGAGGTTACTCAGCCCGGCATGAGGTCCGCCAGTTCCACTTCACAGCGTGGCCAG
AGCATGGTGTTCCCTACCATGCCACGGGGCTGCTGGCCTTCATCCGGCGCGTGAAGGCTTCCAC
TCCACCTGATGCTGGGCCTGTTGTCATTCACTGCAGTGCAGGCACTGGCCGCACAGGCTGCTAC
ATCGTCTTGGATGTGATGCTGGACATGGCTGAGTGTGAGGGGGTCGTGGACATTTACAACTGCG
TGAAGACCCTCTGTTCCCGGCGGGTCAACATGATCCAGACCGAGGAACAATACATCTTCATCCA
CGATGCGATTCTGGAGGCCTGCCTGTGTGGGGAGACCACCATCCCTGTCAATGAGTTCAAGGCC
ACCTATAGGGAGATGATCCGCATTGACCCTCAGAGTAACTCCTCCCAGCTTCGGGAAGAGTTCC
AGACACTGAACTCGGTCACACCGCCGCTGGACGTGGAGGAGTGTAGCATTGCCCTGCTGCCCCG
GAATCGAGACAAGAACCGTAGCATGGACGTGCTGCCGCCAGACCGCTGCCTGCCCTTCCTCATC
TCCAGTGATGGGGACCCCAACAACTACATCAATGCAGCCCTAACTGATAGCTACACACGGAGCG
CCGCCTTCATCGTGACCCTGCACCCACTGCAGAGTACCACACCCGACTTCTGGCGGCTGGTCTA
CGACTATGGGTGCACCTCCATTGTGATGCTCAACCAGCTTAACCAGTCCAACTCCGCCTGGCCC
TGCCTGCAGTACTGGCCAGAACCAGGCAGACAGCAGTATGGCCTCATGGAGGTGGAGTTTGTGT
CTGGCACAGCAAACGAGGATCTGGTGTCCCGAGTGTTCCGGGTGCAGAACTCTTCAAGGCTGCA
GGAGGGCCACCTGCTGGTTCGTCACTTTCAGTTCCTGCGTTGGTCTGCTTATCGGGACACGCCT
GACTCCAGGAAGGCCTTCCTGCACCTGTTGGCTGAGGTGGACAAGTGGCAGGCGGAGAGTGGAG
ATGGGCGCACCGTGGTGCATTGTCTCAATGGCGGTGGCCGCAGTGGCACCTTCTGCGCCTGTGC
AACGGTCTTGGAAATGATCCGCTGTCACAGCCTGGTGGATGTTTTCTTTGCTGCCAAAACGCTT
CGGAACTACAAGCCCAATATGGTGGAGACCATGGATCAATACCATTTCTGCTACGATGTGGCCC
TGGAGTACCTGGAGGCTCTGGAGTTGAGATAGCAGGCGCCTGGACTGGGGCACCCAGTGAACAC
CCAGGGCATGGCCCATCATTCCAGACTGGTGAGGAGGGCCTGTGGCCCCAACTTTGCTCAGCCA
TAATCCTACAGGGAGAACACAGGAGCGGATGCTGCACCGTCTCGGTGACCCCCACGGGAAGGCT
GCAGACCAAGGAGGAGCTTTGCAAGACTGTTTCAGCCCCACCTCCAGAGGGCCCTGTAGAACTG
TGCCGAGAAGCTGGCCTGGGACAGTGGCACTGGCCAAAATAGCTAGTGCTGGGGACCCCAGGCT
AGACCTTCCACTCCATTACAGTCCTTGGCAAGAAACGAATGAGGATCTGCAGAGAGTGTCCAAG
GTTTGCACCCAGTGTGGTCCCTTTGGCACGTGGCGGAAGCTCACTGGGGCTTGGCTGGGGCTGA
GTCCCAGCTGGCTGAGCCCCCGAGAGTCCTGAAGCCGGGACTCCTCCTTGTCTTGGCAGTGGGA
CACACTGAGCATCCTGCAGCTCCTTTCTCCATCCCACTGCCCTTGCAGACCCAGGGGTGCTTTG
CTTGACAATGCTTTCCTCCTGCTTCTGAGCTTTTCCTGCAACAGGAGCCTCCCTCCTGGGCTCC
ATCCCTGCCTGGCCCAGTATATGCAGAATGATACACTTCAGCTCCTTCTTCCCTAGCCTTCAGG
TCGCCATGGCTCGGTCCTGCTCAGCTTGGGCCTGTGACAATCCACAAGGCTGACTCACAGCCCC
CTGGGGTGGAGGTCCCTGTGGCTCTTGGTGAGGTGGTCACTGGATCAGGGTGGAGTAGAGCAAG
GCTGGGGCCAGCTCCCAGAGTTCAGAGAAAGAAGGGGTGCTTTGGGATGGGGACCAGTGCTTTC
TTTCTTTGTTGTTGTTATTTTGTTTTTTGATGGGAGGGTAGGAAGTTCTCTTTATAATGGGGTA
GGCCACACCCCCATTTCGTGCCTCAATTTCCCCATCTGTAAACTGTAGATATGACTACTGACCT
ACCTCACAGGGGGCTGTGGGGAGGTGTAAGGTAATGTTTGTAAAGCGCTTTGTAAATAAATGTG
CTCTCTGAATGCCACCCA

hide sequence

RefSeq Acc Id:

XM_017593121 ⟹ XP_017448610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,857 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,789 (-)	NCBI
Rnor_6.0	5	149,922,374 - 149,996,351 (-)	NCBI

Sequence:

show sequence

TCGTTCGGGCTCCCGCTCTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACCG
CTCCCGCTCGCCTTGGGCTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTCC
AGGACCCAGGCGGCGGCGCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCTT
CCAGTTCTGCGCGCCCGAGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGAC
CCGGTTGTGCCCTGCGAGTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGGA
TCCACCCTGGCACCCGGACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTTC
CCAGCATGCTCCAGGCCAGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCAC
TGTGTGCAGTTCAGCTACTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTCT
ATGTGCGTGTGAACGGGGGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCCG
TCAGTGGCATCAGGCTGAACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTTT
GAGGCTCTCATCTCCCCAGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGCC
ATCCCTGCGCGAAGGCCCCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGAA
TGCATCCTTCCAATGCATGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCGG
CAGAGTGGGGTGCTAGTGCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCCA
CTTTTCCACTGGCCTCTGTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCCC
GCGCGGTGCTGGAGTCTCCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGCG
CCCCCACAGCTGCTGCGTGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATCA
TTGGCGACGGGCCGATCGTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCGA
GGTTCACGCTGTCAACCTGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGAG
ATCAGCGTGCTGCTTACCCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTCA
GCCGGACCAAGTGCGCAGAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGGC
TCGTCAGCTGACCCTGCAGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGCT
GTGTCCCTTTGTTATCACTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTGA
AGATGGAGCGGGGCGCCAGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACGT
GCGTCTGATTCTCACAAACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGAT
GAAGATGTGCCTGGTGGGATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATCT
TTCTCAAGTGGGAGGAGCCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACCA
AAGCATTGAGTCCTCAGACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACTC
CGAAATGAGACTTACCATGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTGC
GTGCTCGTACAAGCAAGGGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAGC
ACCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGTG
CTGTTGAGGCCGGCCCAGGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAAG
AGCGGCCACGGCGCTTGCGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCTT
TGAGACGGCCCTGGCTCGCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCTG
CTTGAGGCCATGCCCTTCACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCGC
TTGAGCCCAGGAAGGCCTACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCCG
ACTGAACTGCATCCGAATTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGTG
TCCCAGAGGTCGGAGGAGATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTCA
TTCTCCTCCTGGGCGCCATCATTATCATCATCCGTAAAGGGAGGGACCGCTATGCCTACTCTTA
CTACCCGAAGCCAGTGAACATGGCAAAAGCCACGGTCAACTATCGCCAGGAGAAGACCCACATG
ATGACTGCTGTGGACCGTAGCTTCACAGATCAGAGCACTCTGCAGGAGGATGAGCGGCTGGGCC
TGTCCTTCATGGATGCTCCTGGCTACAGCCCTCGGGGAGACCAGAGAAGCAGTGGGGTCACTGA
GGCCAGTAGCCTCCTGGGGGGCTCTCCTCGGCGCCCCTGTGGCCGGAAGGGCTCCCCGTATCAC
ACAGGGCAGCTTCACCCTGCAGTACGAGTGGCTGACCTGCTGCAGCACATCAACCAGATGAAGA
CAGCCGAGGGCTACGGCTTCAAGCAAGAGTACGAGAGTTTCTTTGAAGGCTGGGATGCCACCAA
GAAGAAAGACAAGCTGAAGAGCGGCCGGCAGGAGCCAGTGTCTGCCTATGACCGACACCGAGTG
AAGCTGCACCCGATGCTGGGAGACCCTGATGCCGACTACATCTCTGCCAACTACATAGACATTC
GGATAAACCGACAAGGCTACCACAGGTCAAACCACTTCATAGCCACTCAAGGGCCAAAGCCTGA
GATGATCTACGACTTCTGGCGCATGGTGTGGCAGGAGCAGTGTGTGAGCGTCGTCATGATCAGC
AAGCTGGTAGAGGTAAAGTGCTCTCGATACTGGCCCGAGGACTCAGACATGTATGGGGACATCA
AGATCACGCTGGTAAAGACAGAGACACTGGCTGAGTACGTGGTGCGCACCTTTGCCCTGGAGCG
GAGAGGTTACTCAGCCCGGCATGAGGTCCGCCAGTTCCACTTCACAGCGTGGCCAGAGCATGGT
GTTCCCTACCATGCCACGGGGCTGCTGGCCTTCATCCGGCGCGTGAAGGCTTCCACTCCACCTG
ATGCTGGGCCTGTTGTCATTCACTGCAGTGCAGGCACTGGCCGCACAGGCTGCTACATCGTCTT
GGATGTGATGCTGGACATGGCTGAGTGTGAGGGGGTCGTGGACATTTACAACTGCGTGAAGACC
CTCTGTTCCCGGCGGGTCAACATGATCCAGACCGAGGAACAATACATCTTCATCCACGATGCGA
TTCTGGAGGCCTGCCTGTGTGGGGAGACCACCATCCCTGTCAATGAGTTCAAGGCCACCTATAG
GGAGATGATCCGCATTGACCCTCAGAGTAACTCCTCCCAGCTTCGGGAAGAGTTCCAGACACTG
AACTCGGTCACACCGCCGCTGGACGTGGAGGAGTGTAGCATTGCCCTGCTGCCCCGGAATCGAG
ACAAGAACCGTAGCATGGACGTGCTGCCGCCAGACCGCTGCCTGCCCTTCCTCATCTCCAGTGA
TGGGGACCCCAACAACTACATCAATGCAGCCCTAACTGATAGCTACACACGGAGCGCCGCCTTC
ATCGTGACCCTGCACCCACTGCAGAGTACCACACCCGACTTCTGGCGGCTGGTCTACGACTATG
GGTGCACCTCCATTGTGATGCTCAACCAGCTTAACCAGTCCAACTCCGCCTGGCCCTGCCTGCA
GTACTGGCCAGAACCAGGCAGACAGCAGTATGGCCTCATGGAGGTGGAGTTTGTGTCTGGCACA
GCAAACGAGGATCTGGTGTCCCGAGTGTTCCGGGTGCAGAACTCTTCAAGGCTGCAGGAGGGCC
ACCTGCTGGTTCGTCACTTTCAGTTCCTGCGTTGGTCTGCTTATCGGGACACGCCTGACTCCAG
GAAGGCCTTCCTGCACCTGTTGGCTGAGGTGGACAAGTGGCAGGCGGAGAGTGGAGATGGGCGC
ACCGTGGTGCATTGTCTCAATGGCGGTGGCCGCAGTGGCACCTTCTGCGCCTGTGCAACGGTCT
TGGAAATGATCCGCTGTCACAGCCTGGTGGATGTTTTCTTTGCTGCCAAAACGCTTCGGAACTA
CAAGCCCAATATGGTGGAGACCATGGATCAATACCATTTCTGCTACGATGTGGCCCTGGAGTAC
CTGGAGGCTCTGGAGTTGAGATAGCAGGCGCCTGGACTGGGGCACCCAGTGAACACCCAGGGCA
TGGCCCATCATTCCAGACTGGTGAGGAGGGCCTGTGGCCCCAACTTTGCTCAGCCATAATCCTA
CAGGGAGAACACAGGAGCGGATGCTGCACCGTCTCGGTGACCCCCACGGGAAGGCTGCAGACCA
AGGAGGAGCTTTGCAAGACTGTTTCAGCCCCACCTCCAGAGGGCCCTGTAGAACTGTGCCGAGA
AGCTGGCCTGGGACAGTGGCACTGGCCAAAATAGCTAGTGCTGGGGACCCCAGGCTAGACCTTC
CACTCCATTACAGTCCTTGGCAAGAAACGAATGAGGATCTGCAGAGAGTGTCCAAGGTTTGCAC
CCAGTGTGGTCCCTTTGGCACGTGGCGGAAGCTCACTGGGGCTTGGCTGGGGCTGAGTCCCAGC
TGGCTGAGCCCCCGAGAGTCCTGAAGCCGGGACTCCTCCTTGTCTTGGCAGTGGGACACACTGA
GCATCCTGCAGCTCCTTTCTCCATCCCACTGCCCTTGCAGACCCAGGGGTGCTTTGCTTGACAA
TGCTTTCCTCCTGCTTCTGAGCTTTTCCTGCAACAGGAGCCTCCCTCCTGGGCTCCATCCCTGC
CTGGCCCAGTATATGCAGAATGATACACTTCAGCTCCTTCTTCCCTAGCCTTCAGGTCGCCATG
GCTCGGTCCTGCTCAGCTTGGGCCTGTGACAATCCACAAGGCTGACTCACAGCCCCCTGGGGTG
GAGGTCCCTGTGGCTCTTGGTGAGGTGGTCACTGGATCAGGGTGGAGTAGAGCAAGGCTGGGGC
CAGCTCCCAGAGTTCAGAGAAAGAAGGGGTGCTTTGGGATGGGGACCAGTGCTTTCTTTCTTTG
TTGTTGTTATTTTGTTTTTTGATGGGAGGGTAGGAAGTTCTCTTTATAATGGGGTAGGCCACAC
CCCCATTTCGTGCCTCAATTTCCCCATCTGTAAACTGTAGATATGACTACTGACCTACCTCACA
GGGGGCTGTGGGGAGGTGTAAGGTAATGTTTGTAAAGCGCTTTGTAAATAAATGTGCTCTCTGA
ATGCCACCCA

hide sequence

RefSeq Acc Id:

XM_017593122 ⟹ XP_017448611

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,849 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,788 (-)	NCBI
Rnor_6.0	5	149,922,374 - 149,996,350 (-)	NCBI

Sequence:

show sequence

CGTTCGGGCTCCCGCTCTGGACTGGGCGCCAGTCCCGCTCCGCGCGGCGCTGCTCCGCTACCGC
TCCCGCTCGCCTTGGGCTCCGGCTTCGGCTCCGGAGGCGTCGCCTCCCCAGCTACCGGTCTCCA
GGACCCAGGCGGCGGCGCCCCAGCCATGGCCCGAGCTCAGGCTCTGGTCCTGGCGCTCACCTTC
CAGTTCTGCGCGCCCGAGACCGAGACTCCCGCAGCTGGCTGCACCTTCGAGGAGGCGAGTGACC
CGGTTGTGCCCTGCGAGTTCAGCCAGGCTCAGTATGATGACTTCCAGTGGGAGCAAGTACGGAT
CCACCCTGGCACCCGGACCCCTGCAGACCTGCCCCATGGTGCCTACTTGATGGTTAATGCTTCC
CAGCATGCTCCAGGCCAGAGGGCCCATATCATCTTCCAGACCCTGAGCGAGAACGACACCCACT
GTGTGCAGTTCAGCTACTTCCTGTTTAGCCGGGATGGGCACAGCCCAGGCACCCTGGGCGTCTA
TGTGCGTGTGAACGGGGGCCCTCTGGGCAGTGCCGTGTGGAATATGACTGGATCCCACGGCCGT
CAGTGGCATCAGGCTGAACTGGCTGTCAGCACCTTCTGGCCCAATGAGTATCAGGTGCTGTTTG
AGGCTCTCATCTCCCCAGACCATAAGGGCTACATAGGCTTAGATGACATCTTGCTATTCAGCCA
TCCCTGCGCGAAGGCCCCTCACTTCTCCCGCCTTGGAGACGTGGAGGTCAATGCGGGCCAGAAT
GCATCCTTCCAATGCATGGCAGCAGGCAGAGCTGCAGAGGCAGAGCGTTTCTTCCTGCAGCGGC
AGAGTGGGGTGCTAGTGCCTGCGGCTGGGGTGCGGCACATCAGTCACCGTCGCTTCCTGGCCAC
TTTTCCACTGGCCTCTGTAGGCCGCTCGGAGCAGGATCTGTACCGTTGCGTGTCCCAGGCCCCG
CGCGGTGCTGGAGTCTCCAACTTCGCAGAGCTCATCGTCAAAGAGCCTCCCACCCCCATCGCGC
CCCCACAGCTGCTGCGTGCAGGCCCCACCTACCTCATCATCCAGCTCAACACCAACTCCATCAT
TGGCGACGGGCCGATCGTGCGCAAGGAGATCGAGTACCGAATGGCACGGGGCCCGTGGGCCGAG
GTTCACGCTGTCAACCTGCAGACCTACAAGCTGTGGCATCTAGACCCGGACACTGAGTATGAGA
TCAGCGTGCTGCTTACCCGCCCGGGAGATGGAGGCACAGGCCGCCCAGGGCCACCACTGCTCAG
CCGGACCAAGTGCGCAGAGCCCACGAGGGCCCCCAAGGGCCTGGCTTTTGCTGAGATCCAGGCT
CGTCAGCTGACCCTGCAGTGGGAGCCCCTGGGCTACAATGTCACGCGTTGTCATACCTATGCTG
TGTCCCTTTGTTATCACTACACCCTGGGCGGCAGCCACAACCAGACCATCCGGGAGTGTGTGAA
GATGGAGCGGGGCGCCAGCCGCTACACCATCAAGAATCTGCTGCCGTTCAGGAACGTCCACGTG
CGTCTGATTCTCACAAACCCTGAGGGGCGCAAGGAGGGCAAGGAGGTCACCTTCCAGACAGATG
AAGATGTGCCTGGTGGGATCGCCGCTGAGTCTCTCACCTTCACCCCACTAGAGGACATGATCTT
TCTCAAGTGGGAGGAGCCCCAGGAACCCAATGGCCTCATCACTCAGTATGAGATCAGCTACCAA
AGCATTGAGTCCTCAGACCCAGCGGTGAACGTGCCCGGCCCGAGACGCACCATCTCCAAACTCC
GAAATGAGACTTACCATGTCTTCTCCAACCTGCAACCCGGCACCACATACCTGTTCTCTGTGCG
TGCTCGTACAAGCAAGGGCTTTGGCCAGGCGGCTCTCACCGAGATAACCACCAACATCTCAGCA
CCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACTGTGC
TGTTGAGGCCGGCCCAGGGCCGAGGAGCACCCATCAGCGTCTACCAGGTGGTTGTGGAGGAAGA
GCGGCCACGGCGCTTGCGGCGCGAGCCTGGAGGTCAGGACTGCTTCTCGGTACCTCTGACCTTT
GAGACGGCCCTGGCTCGCGGCCTGGTGCACTACTTTGGGGCTGAACTGGCTGCCAGCAGCCTGC
TTGAGGCCATGCCCTTCACTGTGGGTGACAACCAGACCTATCGTGGCTTCTGGAACCCACCGCT
TGAGCCCAGGAAGGCCTACCTCATCTATTTCCAGGCAGCGAGCCACCTGAAAGGGGAAACCCGA
CTGAACTGCATCCGAATTGCCAGGAAAGCTGCGTGCAAGGAGAGCAAGCGACCCCTCGAAGTGT
CCCAGAGGTCGGAGGAGATGGGGCTCATCCTGGGTATCTGTGCAGGTGGCCTTGCCGTCCTCAT
TCTCCTCCTGGGCGCCATCATTATCATCATCCGTAAAGGGAAGCCAGTGAACATGGCAAAAGCC
ACGGTCAACTATCGCCAGGAGAAGACCCACATGATGACTGCTGTGGACCGTAGCTTCACAGATC
AGAGCACTCTGCAGGAGGATGAGCGGCTGGGCCTGTCCTTCATGGATGCTCCTGGCTACAGCCC
TCGGGGAGACCAGAGAAGCAGTGGGGTCACTGAGGCCAGTAGCCTCCTGGGGGGCTCTCCTCGG
CGCCCCTGTGGCCGGAAGGGCTCCCCGTATCACACAGGGCAGCTTCACCCTGCAGTACGAGTGG
CTGACCTGCTGCAGCACATCAACCAGATGAAGACAGCCGAGGGCTACGGCTTCAAGCAAGAGTA
CGAGAGTTTCTTTGAAGGCTGGGATGCCACCAAGAAGAAAGACAAGCTGAAGAGCGGCCGGCAG
GAGCCAGTGTCTGCCTATGACCGACACCGAGTGAAGCTGCACCCGATGCTGGGAGACCCTGATG
CCGACTACATCTCTGCCAACTACATAGACATTCGGATAAACCGACAAGGCTACCACAGGTCAAA
CCACTTCATAGCCACTCAAGGGCCAAAGCCTGAGATGATCTACGACTTCTGGCGCATGGTGTGG
CAGGAGCAGTGTGTGAGCGTCGTCATGATCAGCAAGCTGGTAGAGGTGGGCAGGGTAAAGTGCT
CTCGATACTGGCCCGAGGACTCAGACATGTATGGGGACATCAAGATCACGCTGGTAAAGACAGA
GACACTGGCTGAGTACGTGGTGCGCACCTTTGCCCTGGAGCGGAGAGGTTACTCAGCCCGGCAT
GAGGTCCGCCAGTTCCACTTCACAGCGTGGCCAGAGCATGGTGTTCCCTACCATGCCACGGGGC
TGCTGGCCTTCATCCGGCGCGTGAAGGCTTCCACTCCACCTGATGCTGGGCCTGTTGTCATTCA
CTGCAGTGCAGGCACTGGCCGCACAGGCTGCTACATCGTCTTGGATGTGATGCTGGACATGGCT
GAGTGTGAGGGGGTCGTGGACATTTACAACTGCGTGAAGACCCTCTGTTCCCGGCGGGTCAACA
TGATCCAGACCGAGGAACAATACATCTTCATCCACGATGCGATTCTGGAGGCCTGCCTGTGTGG
GGAGACCACCATCCCTGTCAATGAGTTCAAGGCCACCTATAGGGAGATGATCCGCATTGACCCT
CAGAGTAACTCCTCCCAGCTTCGGGAAGAGTTCCAGACACTGAACTCGGTCACACCGCCGCTGG
ACGTGGAGGAGTGTAGCATTGCCCTGCTGCCCCGGAATCGAGACAAGAACCGTAGCATGGACGT
GCTGCCGCCAGACCGCTGCCTGCCCTTCCTCATCTCCAGTGATGGGGACCCCAACAACTACATC
AATGCAGCCCTAACTGATAGCTACACACGGAGCGCCGCCTTCATCGTGACCCTGCACCCACTGC
AGAGTACCACACCCGACTTCTGGCGGCTGGTCTACGACTATGGGTGCACCTCCATTGTGATGCT
CAACCAGCTTAACCAGTCCAACTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAACCAGGCAGA
CAGCAGTATGGCCTCATGGAGGTGGAGTTTGTGTCTGGCACAGCAAACGAGGATCTGGTGTCCC
GAGTGTTCCGGGTGCAGAACTCTTCAAGGCTGCAGGAGGGCCACCTGCTGGTTCGTCACTTTCA
GTTCCTGCGTTGGTCTGCTTATCGGGACACGCCTGACTCCAGGAAGGCCTTCCTGCACCTGTTG
GCTGAGGTGGACAAGTGGCAGGCGGAGAGTGGAGATGGGCGCACCGTGGTGCATTGTCTCAATG
GCGGTGGCCGCAGTGGCACCTTCTGCGCCTGTGCAACGGTCTTGGAAATGATCCGCTGTCACAG
CCTGGTGGATGTTTTCTTTGCTGCCAAAACGCTTCGGAACTACAAGCCCAATATGGTGGAGACC
ATGGATCAATACCATTTCTGCTACGATGTGGCCCTGGAGTACCTGGAGGCTCTGGAGTTGAGAT
AGCAGGCGCCTGGACTGGGGCACCCAGTGAACACCCAGGGCATGGCCCATCATTCCAGACTGGT
GAGGAGGGCCTGTGGCCCCAACTTTGCTCAGCCATAATCCTACAGGGAGAACACAGGAGCGGAT
GCTGCACCGTCTCGGTGACCCCCACGGGAAGGCTGCAGACCAAGGAGGAGCTTTGCAAGACTGT
TTCAGCCCCACCTCCAGAGGGCCCTGTAGAACTGTGCCGAGAAGCTGGCCTGGGACAGTGGCAC
TGGCCAAAATAGCTAGTGCTGGGGACCCCAGGCTAGACCTTCCACTCCATTACAGTCCTTGGCA
AGAAACGAATGAGGATCTGCAGAGAGTGTCCAAGGTTTGCACCCAGTGTGGTCCCTTTGGCACG
TGGCGGAAGCTCACTGGGGCTTGGCTGGGGCTGAGTCCCAGCTGGCTGAGCCCCCGAGAGTCCT
GAAGCCGGGACTCCTCCTTGTCTTGGCAGTGGGACACACTGAGCATCCTGCAGCTCCTTTCTCC
ATCCCACTGCCCTTGCAGACCCAGGGGTGCTTTGCTTGACAATGCTTTCCTCCTGCTTCTGAGC
TTTTCCTGCAACAGGAGCCTCCCTCCTGGGCTCCATCCCTGCCTGGCCCAGTATATGCAGAATG
ATACACTTCAGCTCCTTCTTCCCTAGCCTTCAGGTCGCCATGGCTCGGTCCTGCTCAGCTTGGG
CCTGTGACAATCCACAAGGCTGACTCACAGCCCCCTGGGGTGGAGGTCCCTGTGGCTCTTGGTG
AGGTGGTCACTGGATCAGGGTGGAGTAGAGCAAGGCTGGGGCCAGCTCCCAGAGTTCAGAGAAA
GAAGGGGTGCTTTGGGATGGGGACCAGTGCTTTCTTTCTTTGTTGTTGTTATTTTGTTTTTTGA
TGGGAGGGTAGGAAGTTCTCTTTATAATGGGGTAGGCCACACCCCCATTTCGTGCCTCAATTTC
CCCATCTGTAAACTGTAGATATGACTACTGACCTACCTCACAGGGGGCTGTGGGGAGGTGTAAG
GTAATGTTTGTAAAGCGCTTTGTAAATAAATGTGCTCTCTGAATGCCACCCA

hide sequence

RefSeq Acc Id:

XM_039109154 ⟹ XP_038965082

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,302,240 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,020,758 (-)	NCBI

RefSeq Acc Id:

XM_039109155 ⟹ XP_038965083

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,857 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,789 (-)	NCBI

RefSeq Acc Id:

XM_039109156 ⟹ XP_038965084

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,308,857 (-)	NCBI
mRatBN7.2	5	143,950,542 - 144,024,789 (-)	NCBI

RefSeq Acc Id:

XM_063287071 ⟹ XP_063143141

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	149,234,628 - 149,307,404 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178504	(Get FASTA)	NCBI Sequence Viewer
	NP_001401978	(Get FASTA)	NCBI Sequence Viewer
	XP_006239060	(Get FASTA)	NCBI Sequence Viewer
	XP_008762352	(Get FASTA)	NCBI Sequence Viewer
	XP_017448609	(Get FASTA)	NCBI Sequence Viewer
	XP_017448610	(Get FASTA)	NCBI Sequence Viewer
	XP_017448611	(Get FASTA)	NCBI Sequence Viewer
	XP_038965082	(Get FASTA)	NCBI Sequence Viewer
	XP_038965083	(Get FASTA)	NCBI Sequence Viewer
	XP_038965084	(Get FASTA)	NCBI Sequence Viewer
	XP_063143141	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAB42210	(Get FASTA)	NCBI Sequence Viewer
	EDL80607	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000030956
	ENSRNOP00000030956.5
	ENSRNOP00000072635.3
	ENSRNOP00000104366
	ENSRNOP00000104366.1

RefSeq Acc Id:	NP_001178504 ⟸ NM_001191575
- Peptide Label:	precursor 1 precursor
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII IIRKGRDRYAYSYYPKPVNMAKATVNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGY SPRGDQRSSGVTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQ EYESFFEGWDATKKKDKLKSGRQEPVSAYDRHRVKLHPMLGDPDADYISANYIDGYHRSNHFIA TQGPKPEMIYDFWRMVWQEQCVSVVMISKLVEVGRVKCSRYWPEDSDMYGDIKITLVKTETLAE YVVRTFALERRGYSARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVIHCSAG TGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILEACLCGETTI PVNEFKATYREMIRIDPQSNSSQLREEFQTLNSVTPPLDVEECSIALLPRNRDKNRSMDVLPPD RCLPFLISSDGDPNNYINAALTDSYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIVMLNQLN QSNSAWPCLQYWPEPGRQQYGLMEVEFVSGTANEDLVSRVFRVQNSSRLQEGHLLVRHFQFLRW SAYRDTPDSRKAFLHLLAEVDKWQAESGDGRTVVHCLNGGGRSGTFCACATVLEMIRCHSLVDV FFAAKTLRNYKPNMVETMDQYHFCYDVALEYLEALELR hide sequence

RefSeq Acc Id:	XP_006239060 ⟸ XM_006238998
- Peptide Label:	isoform X6
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII IIRKGKPVNMAKATVNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGYSPRGDQRSSG VTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWD ATKKKDKLKSGRQEPVSAYDRHRVKLHPMLGDPDADYISANYIDGYHRSNHFIATQGPKPEMIY DFWRMVWQEQCVSVVMISKLVEVKCSRYWPEDSDMYGDIKITLVKTETLAEYVVRTFALERRGY SARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVIHCSAGTGRTGCYIVLDVM LDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILEACLCGETTIPVNEFKATYREMI RIDPQSNSSQLREEFQTLNSVTPPLDVEECSIALLPRNRDKNRSMDVLPPDRCLPFLISSDGDP NNYINAALTDSYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIVMLNQLNQSNSAWPCLQYWP EPGRQQYGLMEVEFVSGTANEDLVSRVFRVQNSSRLQEGHLLVRHFQFLRWSAYRDTPDSRKAF LHLLAEVDKWQAESGDGRTVVHCLNGGGRSGTFCACATVLEMIRCHSLVDVFFAAKTLRNYKPN MVETMDQYHFCYDVALEYLEALELR hide sequence

RefSeq Acc Id:

XP_008762352 ⟸ XM_008764130

- Peptide Label:

isoform X9

- Sequence:

show sequence

MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA
DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL
GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF
SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR
SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK
EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT
RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY
TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE
PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG
QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE
PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI
YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII
IIRKGHEQTVVARAP

hide sequence

RefSeq Acc Id:	XP_017448610 ⟸ XM_017593121
- Peptide Label:	isoform X2
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII IIRKGRDRYAYSYYPKPVNMAKATVNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGY SPRGDQRSSGVTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQ EYESFFEGWDATKKKDKLKSGRQEPVSAYDRHRVKLHPMLGDPDADYISANYIDIRINRQGYHR SNHFIATQGPKPEMIYDFWRMVWQEQCVSVVMISKLVEVKCSRYWPEDSDMYGDIKITLVKTET LAEYVVRTFALERRGYSARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVIHC SAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILEACLCGE TTIPVNEFKATYREMIRIDPQSNSSQLREEFQTLNSVTPPLDVEECSIALLPRNRDKNRSMDVL PPDRCLPFLISSDGDPNNYINAALTDSYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIVMLN QLNQSNSAWPCLQYWPEPGRQQYGLMEVEFVSGTANEDLVSRVFRVQNSSRLQEGHLLVRHFQF LRWSAYRDTPDSRKAFLHLLAEVDKWQAESGDGRTVVHCLNGGGRSGTFCACATVLEMIRCHSL VDVFFAAKTLRNYKPNMVETMDQYHFCYDVALEYLEALELR hide sequence

RefSeq Acc Id:	XP_017448611 ⟸ XM_017593122
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII IIRKGKPVNMAKATVNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGYSPRGDQRSSG VTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFEGWD ATKKKDKLKSGRQEPVSAYDRHRVKLHPMLGDPDADYISANYIDIRINRQGYHRSNHFIATQGP KPEMIYDFWRMVWQEQCVSVVMISKLVEVGRVKCSRYWPEDSDMYGDIKITLVKTETLAEYVVR TFALERRGYSARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVIHCSAGTGRT GCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILEACLCGETTIPVNE FKATYREMIRIDPQSNSSQLREEFQTLNSVTPPLDVEECSIALLPRNRDKNRSMDVLPPDRCLP FLISSDGDPNNYINAALTDSYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIVMLNQLNQSNS AWPCLQYWPEPGRQQYGLMEVEFVSGTANEDLVSRVFRVQNSSRLQEGHLLVRHFQFLRWSAYR DTPDSRKAFLHLLAEVDKWQAESGDGRTVVHCLNGGGRSGTFCACATVLEMIRCHSLVDVFFAA KTLRNYKPNMVETMDQYHFCYDVALEYLEALELR hide sequence

RefSeq Acc Id:	XP_017448609 ⟸ XM_017593120
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MARAQALVLALTFQFCAPETETPAAGCTFEEASDPVVPCEFSQAQYDDFQWEQVRIHPGTRTPA DLPHGAYLMVNASQHAPGQRAHIIFQTLSENDTHCVQFSYFLFSRDGHSPGTLGVYVRVNGGPL GSAVWNMTGSHGRQWHQAELAVSTFWPNEYQVLFEALISPDHKGYIGLDDILLFSHPCAKAPHF SRLGDVEVNAGQNASFQCMAAGRAAEAERFFLQRQSGVLVPAAGVRHISHRRFLATFPLASVGR SEQDLYRCVSQAPRGAGVSNFAELIVKEPPTPIAPPQLLRAGPTYLIIQLNTNSIIGDGPIVRK EIEYRMARGPWAEVHAVNLQTYKLWHLDPDTEYEISVLLTRPGDGGTGRPGPPLLSRTKCAEPT RAPKGLAFAEIQARQLTLQWEPLGYNVTRCHTYAVSLCYHYTLGGSHNQTIRECVKMERGASRY TIKNLLPFRNVHVRLILTNPEGRKEGKEVTFQTDEDVPGGIAAESLTFTPLEDMIFLKWEEPQE PNGLITQYEISYQSIESSDPAVNVPGPRRTISKLRNETYHVFSNLQPGTTYLFSVRARTSKGFG QAALTEITTNISAPSFDYADMPSPLGESENTITVLLRPAQGRGAPISVYQVVVEEERPRRLRRE PGGQDCFSVPLTFETALARGLVHYFGAELAASSLLEAMPFTVGDNQTYRGFWNPPLEPRKAYLI YFQAASHLKGETRLNCIRIARKAACKESKRPLEVSQRSEEMGLILGICAGGLAVLILLLGAIII IIRKGRDRYAYSYYPKPVNMAKATVNYRQEKTHMMTAVDRSFTDQSTLQEDERLGLSFMDAPGY SPRGDQRSSGVTEASSLLGGSPRRPCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQ EYESFFEGWDATKKKDKLKSGRQEPVSAYDRHRVKLHPMLGDPDADYISANYIDIRINRQGYHR SNHFIATQGPKPEMIYDFWRMVWQEQCVSVVMISKLVEVGRVKCSRYWPEDSDMYGDIKITLVK TETLAEYVVRTFALERRGYSARHEVRQFHFTAWPEHGVPYHATGLLAFIRRVKASTPPDAGPVV IHCSAGTGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRVNMIQTEEQYIFIHDAILEACL CGETTIPVNEFKATYREMIRIDPQSNSSQLREEFQTLNSVTPPLDVEECSIALLPRNRDKNRSM DVLPPDRCLPFLISSDGDPNNYINAALTDSYTRSAAFIVTLHPLQSTTPDFWRLVYDYGCTSIV MLNQLNQSNSAWPCLQYWPEPGRQQYGLMEVEFVSGTANEDLVSRVFRVQNSSRLQEGHLLVRH FQFLRWSAYRDTPDSRKAFLHLLAEVDKWQAESGDGRTVVHCLNGGGRSGTFCACATVLEMIRC HSLVDVFFAAKTLRNYKPNMVETMDQYHFCYDVALEYLEALELR hide sequence

Ensembl Acc Id:

ENSRNOP00000030956 ⟸ ENSRNOT00000036148

Ensembl Acc Id:

ENSRNOP00000072635 ⟸ ENSRNOT00000091637

RefSeq Acc Id:	XP_038965083 ⟸ XM_039109155
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965084 ⟸ XM_039109156
- Peptide Label:	isoform X7
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038965082 ⟸ XM_039109154
- Peptide Label:	isoform X3
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	NP_001401978 ⟸ NM_001415049
- Peptide Label:	isoform 2 precursor
- UniProtKB:	A0A0G2K3H0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063143141 ⟸ XM_063287071
- Peptide Label:	isoform X8
- UniProtKB:	F1MAG7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000104366 ⟸ ENSRNOT00000158638

Protein Domains

Fibronectin type-III MAM Tyrosine specific protein phosphatases Tyrosine-protein phosphatase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1MAG7-F1-model_v2	AlphaFold	F1MAG7	1-1446	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13694088

Promoter ID:

EPDNEW_R4612

Type:

single initiation site

Name:

Ptpru_1

Description:

protein tyrosine phosphatase, receptor type, U

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	149,996,320 - 149,996,380	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620782	AgrOrtholog
BioCyc Gene	G2FUF-39721	BioCyc
Ensembl Genes	ENSRNOG00000013515	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000036148	ENTREZGENE
	ENSRNOT00000036148.6	UniProtKB/TrEMBL
	ENSRNOT00000091637.3	UniProtKB/TrEMBL
	ENSRNOT00000158638	ENTREZGENE
	ENSRNOT00000158638.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.200	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	3.90.190.10	UniProtKB/TrEMBL
InterPro	ConA-like_dom	UniProtKB/TrEMBL
	Fibronectin_type3	UniProtKB/TrEMBL
	Fn3_PTPRU	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	MAM_dom	UniProtKB/TrEMBL
	Prot-tyrosine_phosphatase-like	UniProtKB/TrEMBL
	R-tyr_protein_phosphatases	UniProtKB/TrEMBL
	Tyr/Dual-sp_Pase	UniProtKB/TrEMBL
	Tyr_Pase_AS	UniProtKB/TrEMBL
	Tyr_Pase_cat	UniProtKB/TrEMBL
	Tyr_Pase_rcpt/non-rcpt	UniProtKB/TrEMBL
NCBI Gene	116680	ENTREZGENE
PANTHER	PROTEIN-TYROSINE-PHOSPHATASE-RELATED	UniProtKB/TrEMBL
	SUSHI DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
Pfam	fn3	UniProtKB/TrEMBL
	Fn3_PTPRU	UniProtKB/TrEMBL
	MAM	UniProtKB/TrEMBL
	Y_phosphatase	UniProtKB/TrEMBL
PhenoGen	Ptpru	PhenoGen
PRINTS	FNTYPEIII	UniProtKB/TrEMBL
	MAMDOMAIN	UniProtKB/TrEMBL
	PRTYPHPHTASE	UniProtKB/TrEMBL
PROSITE	FN3	UniProtKB/TrEMBL
	MAM_2	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_1	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_2	UniProtKB/TrEMBL
	TYR_PHOSPHATASE_PTP	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000013515	RatGTEx
SMART	FN3	UniProtKB/TrEMBL
	MAM	UniProtKB/TrEMBL
	PTPc	UniProtKB/TrEMBL
	PTPc_motif	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	ConA_like_lec_gl	UniProtKB/TrEMBL
	FN_III-like	UniProtKB/TrEMBL
	SSF48726	UniProtKB/TrEMBL
	SSF52799	UniProtKB/TrEMBL
UniProt	A0A0G2K3H0	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LIX9_RAT	UniProtKB/TrEMBL
	A6ISQ6_RAT	UniProtKB/TrEMBL
	F1MAG7	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Ptpru	protein tyrosine phosphatase, receptor type, U			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Ptpru	protein tyrosine phosphatase, receptor type, U			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar