Dcbld2 (discoidin, CUB and LCCL domain containing 2) - Rat Genome Database

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Gene: Dcbld2 (discoidin, CUB and LCCL domain containing 2) Rattus norvegicus
Analyze
Symbol: Dcbld2
Name: discoidin, CUB and LCCL domain containing 2
RGD ID: 620543
Description: Predicted to enable signaling receptor activity. Predicted to be involved in negative regulation of cell growth and wound healing. Predicted to be located in cell surface. Predicted to be active in plasma membrane. Orthologous to human DCBLD2 (discoidin, CUB and LCCL domain containing 2); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: discoidin, CUB and LCCL domain-containing protein 2; endothelial and smooth muscle cell-derived neuropilin-like protein; Esdn
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81155,594,691 - 55,649,113 (-)NCBIGRCr8
mRatBN7.21142,125,525 - 42,179,927 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1142,125,787 - 42,179,697 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1150,873,338 - 50,927,850 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01143,534,906 - 43,589,420 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,663,530 - 42,718,044 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01144,237,814 - 44,292,884 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1144,241,111 - 44,292,884 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01147,430,604 - 47,483,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41142,941,795 - 42,980,245 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11142,999,383 - 43,037,833 (-)NCBI
Celera1141,924,498 - 41,978,886 (-)NCBICelera
Cytogenetic Map11q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcbld2Ratpolycystic ovary syndrome  ISODCBLD2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21411543
Dcbld2RatStomach Neoplasms  ISODCBLD2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18314483

1 to 20 of 99 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcbld2Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of DCBLD2 mRNA]CTDPMID:31150632
Dcbld2Rat1,1-dichloroethene decreases expressionISODcbld2 (Mus musculus)6480464vinylidene chloride results in decreased expression of DCBLD2 mRNACTDPMID:26682919
Dcbld2Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of DCBLD2 mRNACTDPMID:29097150
Dcbld2Rat17beta-estradiol multiple interactionsISODCBLD2 (Homo sapiens)6480464[Estradiol co-treated with TGFB1 protein] results in increased expression of DCBLD2 mRNACTDPMID:30165855
Dcbld2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISODcbld2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of DCBLD2 mRNACTDPMID:19770486
Dcbld2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of DCBLD2 mRNACTDPMID:32109520
Dcbld2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISODcbld2 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of DCBLD2 mRNACTDPMID:21570461
Dcbld2Rat2-butoxyethanol increases expressionISODcbld2 (Mus musculus)6480464n-butoxyethanol results in increased expression of DCBLD2 mRNACTDPMID:19812364
Dcbld2Rat3,3',4,4',5-pentachlorobiphenyl decreases expressionEXP 64804643 more ...CTDPMID:23196670
Dcbld2Rat4,4'-sulfonyldiphenol decreases methylationISODcbld2 (Mus musculus)6480464bisphenol S results in decreased methylation of DCBLD2 exonCTDPMID:33297965
Dcbld2Rat4-hydroxyphenyl retinamide decreases expressionISODcbld2 (Mus musculus)6480464Fenretinide results in decreased expression of DCBLD2 mRNACTDPMID:28973697
Dcbld2Rat5-aza-2'-deoxycytidine multiple interactionsISODCBLD2 (Homo sapiens)6480464[[Decitabine co-treated with trichostatin A] affects the methylation of DCBLD2 promoter] which affects the expression of DCBLD2 mRNA more ...CTDPMID:18314483
Dcbld2Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of DCBLD2 mRNACTDPMID:24780913
Dcbld2Rat8-Br-cAMP increases expressionISODCBLD2 (Homo sapiens)64804648-Bromo Cyclic Adenosine Monophosphate results in increased expression of DCBLD2 mRNACTDPMID:22079614
Dcbld2Ratacetamide increases expressionEXP 6480464acetamide results in increased expression of DCBLD2 mRNACTDPMID:31881176
Dcbld2Rataflatoxin B1 increases expressionISODCBLD2 (Homo sapiens)6480464Aflatoxin B1 results in increased expression of DCBLD2 mRNACTDPMID:21641981 and PMID:22100608
Dcbld2Rataflatoxin M1 decreases expressionISODCBLD2 (Homo sapiens)6480464Aflatoxin M1 results in decreased expression of DCBLD2 mRNACTDPMID:30928695
Dcbld2Ratall-trans-retinoic acid decreases expressionISODCBLD2 (Homo sapiens)6480464Tretinoin results in decreased expression of DCBLD2 mRNACTDPMID:33167477
Dcbld2Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of DCBLD2 mRNACTDPMID:16483693
Dcbld2Ratantirheumatic drug increases expressionISODCBLD2 (Homo sapiens)6480464Antirheumatic Agents results in increased expression of DCBLD2 mRNACTDPMID:24449571

1 to 20 of 99 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcbld2Ratnegative regulation of cell growth involved_inISSUniProtKB:Q96PD21600115GO_REF:0000024UniProtGO_REF:0000024
Dcbld2Ratnegative regulation of cell growth involved_inISODCBLD2 (Homo sapiens)1624291 PMID:11447234RGDPMID:11447234
Dcbld2Ratwound healing involved_inISSUniProtKB:Q96PD21600115GO_REF:0000024UniProtGO_REF:0000024
Dcbld2Ratwound healing involved_inIBAPANTHER:PTN002929622 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Dcbld2Ratwound healing involved_inISODCBLD2 (Homo sapiens)1624291 PMID:11447234RGDPMID:11447234

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dcbld2Ratcell surface located_inISSUniProtKB:Q96PD21600115GO_REF:0000024UniProtGO_REF:0000024
Dcbld2Ratcell surface located_inISODCBLD2 (Homo sapiens)1624291 PMID:11447234RGDPMID:11447234
Dcbld2Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Dcbld2Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Dcbld2Ratplasma membrane is_active_inIBAMGI:106206 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Dcbld2Ratplasma membrane located_inISSUniProtKB:Q96PD21600115GO_REF:0000024UniProtGO_REF:0000024
Dcbld2Ratplasma membrane located_inISODCBLD2 (Homo sapiens)1624291 PMID:11447234RGDPMID:11447234

Molecular Function

  


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ESDN, a novel neuropilin-like membrane protein cloned from vascular cells with the longest secretory signal sequence among eukaryotes, is up-regulated after vascular injury. Kobuke K, etal., J Biol Chem 2001 Sep 7;276(36):34105-14.
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions


Dcbld2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81155,594,691 - 55,649,113 (-)NCBIGRCr8
mRatBN7.21142,125,525 - 42,179,927 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1142,125,787 - 42,179,697 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1150,873,338 - 50,927,850 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01143,534,906 - 43,589,420 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,663,530 - 42,718,044 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01144,237,814 - 44,292,884 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1144,241,111 - 44,292,884 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01147,430,604 - 47,483,837 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41142,941,795 - 42,980,245 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11142,999,383 - 43,037,833 (-)NCBI
Celera1141,924,498 - 41,978,886 (-)NCBICelera
Cytogenetic Map11q12NCBI
DCBLD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38398,795,941 - 98,901,695 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl398,795,941 - 98,901,695 (-)EnsemblGRCh38hg38GRCh38
GRCh37398,514,785 - 98,620,539 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36399,997,504 - 100,103,223 (-)NCBINCBI36Build 36hg18NCBI36
Build 34399,997,503 - 100,103,223NCBI
Celera396,906,479 - 97,012,297 (-)NCBICelera
Cytogenetic Map3q12.1NCBI
HuRef395,886,827 - 95,992,670 (-)NCBIHuRef
CHM1_1398,477,944 - 98,585,228 (-)NCBICHM1_1
T2T-CHM13v2.03101,504,222 - 101,610,006 (-)NCBIT2T-CHM13v2.0
Dcbld2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391658,228,789 - 58,304,013 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1658,228,806 - 58,290,090 (+)EnsemblGRCm39 Ensembl
GRCm381658,408,535 - 58,469,745 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1658,408,443 - 58,469,727 (+)EnsemblGRCm38mm10GRCm38
MGSCv371658,408,648 - 58,469,858 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361658,351,078 - 58,412,288 (+)NCBIMGSCv36mm8
Celera1658,693,476 - 58,754,355 (+)NCBICelera
Cytogenetic Map16C1.2NCBI
cM Map1634.52NCBI
Dcbld2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955427453,820 - 553,859 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955427453,820 - 536,720 (-)NCBIChiLan1.0ChiLan1.0
DCBLD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2296,747,727 - 96,848,361 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1396,752,532 - 96,853,136 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0395,899,779 - 95,999,582 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13102,580,309 - 102,680,805 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3102,580,315 - 102,680,805 (-)Ensemblpanpan1.1panPan2
DCBLD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1335,627,315 - 5,691,680 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl335,628,578 - 5,691,680 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha335,778,219 - 5,858,365 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0335,766,275 - 5,846,552 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl335,766,293 - 5,847,129 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1335,651,967 - 5,732,130 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0335,702,254 - 5,782,714 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0335,978,829 - 6,065,249 (-)NCBIUU_Cfam_GSD_1.0
Dcbld2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602151,243,087 - 151,326,852 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366304,140,933 - 4,226,078 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366304,140,999 - 4,224,741 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DCBLD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13160,063,742 - 160,160,284 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113160,063,742 - 160,160,054 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213170,350,090 - 170,362,313 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DCBLD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12281,974,031 - 82,065,697 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2281,974,141 - 82,062,160 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604184,489,190 - 84,580,627 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dcbld2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478911,845,563 - 11,967,531 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Dcbld2
332 total Variants

Predicted Target Of
Summary Value
Count of predictions:31
Count of miRNA genes:28
Interacting mature miRNAs:30
Transcripts:ENSRNOT00000002251
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
11528648Bss118Bone structure and strength QTL 1186.6582e-07femur strength trait (VT:0010010)femur ultimate displacement (CMO:0002719)114063876343376331Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat

1 to 10 of 18 rows
RH140710  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21142,125,641 - 42,125,820 (+)MAPPERmRatBN7.2
Rnor_6.01144,240,966 - 44,241,144NCBIRnor6.0
Rnor_5.01147,430,459 - 47,430,637UniSTSRnor5.0
RGSC_v3.41142,941,650 - 42,941,828UniSTSRGSC3.4
Celera1141,924,353 - 41,924,531UniSTS
RH 3.4 Map11311.8UniSTS
Cytogenetic Map11q12UniSTS
RH66607  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81155,607,442 - 55,608,311 (+)Marker Load Pipeline
mRatBN7.21142,138,276 - 42,139,144 (+)MAPPERmRatBN7.2
Rnor_6.01144,253,580 - 44,254,450NCBIRnor6.0
Rnor_5.01147,443,172 - 47,444,042UniSTSRnor5.0
RGSC_v3.41142,954,366 - 42,955,233UniSTSRGSC3.4
Celera1141,937,224 - 41,938,091UniSTS
Cytogenetic Map11q12UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000084060   ⟹   ENSRNOP00000069998
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1142,125,787 - 42,179,697 (-)Ensembl
Rnor_6.0 Ensembl1144,241,111 - 44,292,884 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110283   ⟹   ENSRNOP00000077062
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1142,125,787 - 42,179,697 (-)Ensembl
RefSeq Acc Id: NM_130419   ⟹   NP_569103
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81155,594,691 - 55,649,085 (-)NCBI
mRatBN7.21142,125,525 - 42,179,923 (-)NCBI
Rnor_6.01144,241,111 - 44,292,884 (-)NCBI
Rnor_5.01147,430,604 - 47,483,837 (-)NCBI
RGSC_v3.41142,941,795 - 42,980,245 (-)RGD
Celera1141,924,498 - 41,978,886 (-)RGD
Sequence:
RefSeq Acc Id: XM_039087921   ⟹   XP_038943849
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81155,602,654 - 55,649,113 (-)NCBI
mRatBN7.21142,133,599 - 42,179,927 (-)NCBI
Protein RefSeqs NP_569103 (Get FASTA)   NCBI Sequence Viewer  
  XP_038943849 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAL30180 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000069998
GenBank Protein Q91ZV2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_569103   ⟸   NM_130419
- Peptide Label: precursor
- UniProtKB: Q91ZV2 (UniProtKB/Swiss-Prot),   A0A0G2JWS6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069998   ⟸   ENSRNOT00000084060
RefSeq Acc Id: XP_038943849   ⟸   XM_039087921
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000077062   ⟸   ENSRNOT00000110283
CUB   F5/8 type C   LCCL

Name Modeler Protein Id AA Range Protein Structure
AF-Q91ZV2-F1-model_v2 AlphaFold Q91ZV2 1-769 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 35 of 35 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-21560 BioCyc
Ensembl Genes ENSRNOG00000055281 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000084060 ENTREZGENE
Gene3D-CATH 2.170.130.20 UniProtKB/Swiss-Prot
  2.60.120.290 UniProtKB/Swiss-Prot
  Galactose-binding domain-like UniProtKB/Swiss-Prot
InterPro CUB_dom UniProtKB/Swiss-Prot
  FA58C UniProtKB/Swiss-Prot
  Galactose-bd-like_sf UniProtKB/Swiss-Prot
  LCCL UniProtKB/Swiss-Prot
  LCCL_sf UniProtKB/Swiss-Prot
  Neuropilin_MCO_CoagFactor UniProtKB/Swiss-Prot
  Sperma_CUB_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:155696 UniProtKB/Swiss-Prot
NCBI Gene 155696 ENTREZGENE
PANTHER DISCOIDIN, CUB AND LCCL DOMAIN-CONTAINING PROTEIN 2 UniProtKB/Swiss-Prot
  F5/8 TYPE C DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot
Pfam CUB UniProtKB/Swiss-Prot
  F5_F8_type_C UniProtKB/Swiss-Prot
  LCCL UniProtKB/Swiss-Prot
PhenoGen Dcbld2 PhenoGen
PROSITE CUB UniProtKB/Swiss-Prot
  FA58C_1 UniProtKB/Swiss-Prot
  FA58C_3 UniProtKB/Swiss-Prot
  LCCL UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000055281 RatGTEx
SMART CUB UniProtKB/Swiss-Prot
  FA58C UniProtKB/Swiss-Prot
  LCCL UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49785 UniProtKB/Swiss-Prot
  SSF49854 UniProtKB/Swiss-Prot
  SSF69848 UniProtKB/Swiss-Prot
UniProt A0A0G2JWS6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y7D9_RAT UniProtKB/TrEMBL
  DCBD2_RAT UniProtKB/Swiss-Prot, ENTREZGENE
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Dcbld2  discoidin, CUB and LCCL domain containing 2  Esdn  endothelial and smooth muscle cell-derived neuropilin-like protein  Symbol and Name updated 1299863 APPROVED
2002-08-07 Esdn  endothelial and smooth muscle cell-derived neuropilin-like protein      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_domains contains a CUB domain, a coagulation factor V/VIII homology domain and an LCCL domain 632753
gene_homology 84% amino acid identity with human homolog 632753