Ap3m1 (adaptor related protein complex 3 subunit mu 1) - Rat Genome Database

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Gene: Ap3m1 (adaptor related protein complex 3 subunit mu 1) Rattus norvegicus
Analyze
Symbol: Ap3m1
Name: adaptor related protein complex 3 subunit mu 1
RGD ID: 620417
Description: Predicted to enable small GTPase binding activity. Predicted to be involved in anterograde synaptic vesicle transport and postsynaptic neurotransmitter receptor internalization. Predicted to be located in Golgi apparatus; axon cytoplasm; and cytoplasmic vesicle membrane. Predicted to be part of clathrin adaptor complex. Predicted to be active in postsynaptic recycling endosome. Orthologous to human AP3M1 (adaptor related protein complex 3 subunit mu 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: adapter-related protein complex 3 mu-1 subunit; adapter-related protein complex 3 subunit mu-1; adaptor-related protein complex 3 subunit mu-1; adaptor-related protein complex 3, mu 1 subunit; adaptor-related protein complex AP-3 mu 1 subunit; adaptor-related protein complex AP-3, mu 1 subunit; AP-3 adapter complex mu3A subunit; AP-3 adaptor complex mu3A subunit; AP-3 complex subunit mu-1; clathrin assembly protein assembly protein complex 1 medium chain homolog 1; clathrin assembly protein assembly protein complex 3 mu-1 medium chain; clathrin coat assembly protein AP47 homolog 1; clathrin coat-associated protein AP47 homolog 1; clathrin-associated adaptor protein homolog (p47A); golgi adaptor AP-1 47 kDa protein homolog 1; HA1 47 kDa subunit homolog 1; Mu-adaptin 3A; mu3A-adaptin; P47a
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,285,591 - 3,314,139 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl153,295,444 - 3,313,104 (+)EnsemblGRCr8
mRatBN7.2153,246,616 - 3,264,846 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,246,926 - 3,264,844 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx153,257,147 - 3,275,058 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,643,635 - 4,661,546 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,255,952 - 3,273,863 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0153,435,998 - 3,454,281 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,436,361 - 3,454,279 (+)Ensemblrn6Rnor6.0
Rnor_5.0153,414,320 - 3,432,591 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4153,459,364 - 3,477,284 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera151,326,338 - 1,344,266 (-)NCBICelera
RGSC_v3.1153,459,363 - 3,477,282 (+)NCBI
Cytogenetic Map15p16NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
2-methylcholine  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
ammonium chloride  (EXP)
antimycin A  (ISO)
aristolochic acid A  (ISO)
benzo[a]pyrene  (ISO)
bisphenol F  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
deguelin  (ISO)
dextran sulfate  (ISO)
dibutyl phthalate  (EXP,ISO)
diethylstilbestrol  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
ethyl methanesulfonate  (ISO)
Evodiamine  (ISO)
fenpyroximate  (ISO)
flutamide  (EXP)
folic acid  (ISO)
furan  (EXP)
gentamycin  (EXP)
ivermectin  (ISO)
ketamine  (EXP)
ketoconazole  (ISO)
lead(0)  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentachlorophenol  (ISO)
phenobarbital  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
reactive oxygen species  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
Soman  (EXP)
sulforaphane  (ISO)
tamoxifen  (ISO)
tebufenpyrad  (ISO)
temozolomide  (ISO)
testosterone  (ISO)
triphenyl phosphate  (EXP,ISO)
valproic acid  (ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Two rat homologs of clathrin-associated adaptor proteins. Pevsner J, etal., Gene 1994 Sep 2;146(2):279-83.
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
9. Direct interaction of Dysbindin with the AP-3 complex via its mu subunit. Taneichi-Kuroda S, etal., Neurochem Int. 2009 Jun;54(7):431-8. doi: 10.1016/j.neuint.2009.01.014. Epub 2009 Jan 31.
Additional References at PubMed
PMID:17897319   PMID:21998198   PMID:22511774   PMID:23404500  


Genomics

Comparative Map Data
Ap3m1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8153,285,591 - 3,314,139 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl153,295,444 - 3,313,104 (+)EnsemblGRCr8
mRatBN7.2153,246,616 - 3,264,846 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl153,246,926 - 3,264,844 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx153,257,147 - 3,275,058 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0154,643,635 - 4,661,546 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0153,255,952 - 3,273,863 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0153,435,998 - 3,454,281 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl153,436,361 - 3,454,279 (+)Ensemblrn6Rnor6.0
Rnor_5.0153,414,320 - 3,432,591 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4153,459,364 - 3,477,284 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera151,326,338 - 1,344,266 (-)NCBICelera
RGSC_v3.1153,459,363 - 3,477,282 (+)NCBI
Cytogenetic Map15p16NCBI
AP3M1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381074,120,255 - 74,150,828 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1074,120,255 - 74,151,055 (-)Ensemblhg38GRCh38
GRCh371075,880,013 - 75,910,586 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361075,550,021 - 75,580,832 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341075,551,522 - 75,580,793NCBI
Celera1069,165,286 - 69,196,141 (-)NCBICelera
Cytogenetic Map10q22.2NCBI
HuRef1069,875,318 - 69,906,129 (-)NCBIHuRef
CHM1_11076,161,986 - 76,192,810 (-)NCBICHM1_1
T2T-CHM13v2.01074,991,657 - 75,022,213 (-)NCBIT2T-CHM13v2.0
Ap3m1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391421,083,810 - 21,102,603 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1421,081,510 - 21,102,576 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381421,033,106 - 21,052,553 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1421,031,442 - 21,052,508 (-)Ensemblmm10GRCm38
MGSCv371421,852,964 - 21,871,664 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361419,823,362 - 19,840,737 (-)NCBIMGSCv36mm8
Celera1417,412,982 - 17,431,682 (-)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1411.58NCBI
Ap3m1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543717,786,419 - 17,810,678 (+)Ensembl
ChiLan1.0NW_00495543717,786,419 - 17,810,678 (+)NCBIChiLan1.0ChiLan1.0
AP3M1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2886,271,446 - 86,300,899 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11086,276,768 - 86,306,222 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01070,643,520 - 70,672,821 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11073,312,906 - 73,342,706 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1073,312,906 - 73,342,382 (-)EnsemblpanPan2panpan1.1
AP3M1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1424,521,655 - 24,540,232 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl424,516,758 - 24,540,232 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha424,658,008 - 24,676,585 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0424,803,944 - 24,822,504 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl424,803,979 - 24,822,734 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1424,699,306 - 24,717,881 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0424,899,245 - 24,917,812 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0425,253,767 - 25,272,327 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ap3m1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721356,531,183 - 56,558,099 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365215,023,935 - 5,050,822 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365215,023,896 - 5,050,822 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP3M1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1476,801,007 - 76,835,678 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11476,813,158 - 76,835,674 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21482,939,381 - 82,961,757 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AP3M1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1957,222,363 - 57,251,593 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl957,230,801 - 57,251,616 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604817,794,754 - 17,825,745 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap3m1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247547,592,155 - 7,612,696 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247547,591,811 - 7,612,695 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Ap3m1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11290,827,400 - 90,845,718 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Ap3m1
125 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:910
Count of miRNA genes:294
Interacting mature miRNAs:381
Transcripts:ENSRNOT00000016387
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15231575947315759Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)15278592347785923Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15139411584Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15132342855Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15144836456Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15231575953331089Rat
1300142Bp191Blood pressure QTL 1913.14arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)15115177511Rat

Markers in Region
R75378  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8153,312,787 - 3,312,954 (+)Marker Load Pipeline
Celera151,327,523 - 1,327,690UniSTS
Cytogenetic Map15p16UniSTS
AW534407  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2153,264,549 - 3,264,708 (+)MAPPERmRatBN7.2
Rnor_6.0153,453,985 - 3,454,143NCBIRnor6.0
Rnor_5.0153,432,295 - 3,432,453UniSTSRnor5.0
RGSC_v3.4153,476,988 - 3,477,146UniSTSRGSC3.4
Celera151,326,476 - 1,326,634UniSTS
RH 3.4 Map1561.2UniSTS
Cytogenetic Map15p16UniSTS
RH141064  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2153,263,476 - 3,263,667 (+)MAPPERmRatBN7.2
Rnor_6.0153,452,912 - 3,453,102NCBIRnor6.0
Rnor_5.0153,431,222 - 3,431,412UniSTSRnor5.0
RGSC_v3.4153,475,915 - 3,476,105UniSTSRGSC3.4
Celera151,327,517 - 1,327,707UniSTS
RH 3.4 Map1562.4UniSTS
Cytogenetic Map15p16UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000016387   ⟹   ENSRNOP00000016387
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl153,246,926 - 3,264,844 (+)Ensembl
Rnor_6.0 Ensembl153,436,361 - 3,454,279 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000096809   ⟹   ENSRNOP00000093883
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl153,295,444 - 3,313,104 (+)Ensembl
mRatBN7.2 Ensembl153,247,112 - 3,263,804 (+)Ensembl
RefSeq Acc Id: NM_133593   ⟹   NP_598277
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,296,218 - 3,314,139 (+)NCBI
mRatBN7.2153,246,926 - 3,264,846 (+)NCBI
Rnor_6.0153,436,361 - 3,454,281 (+)NCBI
Rnor_5.0153,414,320 - 3,432,591 (+)NCBI
RGSC_v3.4153,459,364 - 3,477,284 (+)RGD
Celera151,326,338 - 1,344,266 (-)RGD
Sequence:
RefSeq Acc Id: XM_006251629   ⟹   XP_006251691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,295,938 - 3,313,107 (+)NCBI
mRatBN7.2153,246,648 - 3,263,814 (+)NCBI
Rnor_6.0153,436,079 - 3,453,249 (+)NCBI
Rnor_5.0153,414,320 - 3,432,591 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006251630   ⟹   XP_006251692
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8153,285,591 - 3,313,107 (+)NCBI
mRatBN7.2153,246,616 - 3,263,814 (+)NCBI
Rnor_6.0153,435,998 - 3,452,568 (+)NCBI
Rnor_5.0153,414,320 - 3,432,591 (+)NCBI
Sequence:
RefSeq Acc Id: NP_598277   ⟸   NM_133593
- UniProtKB: P53676 (UniProtKB/Swiss-Prot),   Q6IRG9 (UniProtKB/TrEMBL),   A6KKR5 (UniProtKB/TrEMBL),   F7FH36 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006251692   ⟸   XM_006251630
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006251691   ⟸   XM_006251629
- Peptide Label: isoform X2
- UniProtKB: P53676 (UniProtKB/Swiss-Prot),   Q6IRG9 (UniProtKB/TrEMBL),   A6KKR5 (UniProtKB/TrEMBL),   F7FH36 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016387   ⟸   ENSRNOT00000016387
Ensembl Acc Id: ENSRNOP00000093883   ⟸   ENSRNOT00000096809
Protein Domains
MHD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P53676-F1-model_v2 AlphaFold P53676 1-418 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699553
Promoter ID:EPDNEW_R10076
Type:initiation region
Name:Ap3m1_1
Description:adaptor-related protein complex 3, mu 1 subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0153,436,321 - 3,436,381EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620417 AgrOrtholog
BioCyc Gene G2FUF-14572 BioCyc
Ensembl Genes ENSRNOG00000011461 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000096809 ENTREZGENE
Gene3D-CATH 3.30.450.60 UniProtKB/Swiss-Prot
  Mu homology domain, subdomain B UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7096586 IMAGE-MGC_LOAD
InterPro Adaptor_comp_med_subunit UniProtKB/Swiss-Prot
  AP2_Mu_C_sf UniProtKB/Swiss-Prot
  AP_mu_sigma_su UniProtKB/Swiss-Prot
  Clathrin_mu UniProtKB/Swiss-Prot
  Clathrin_mu_CS UniProtKB/Swiss-Prot
  Longin-like_dom_sf UniProtKB/Swiss-Prot
  MHD UniProtKB/Swiss-Prot
MGC_CLONE MGC:91500 IMAGE-MGC_LOAD
NCBI Gene 171126 ENTREZGENE
PANTHER AP COMPLEX SUBUNIT MU UniProtKB/Swiss-Prot
Pfam Adap_comp_sub UniProtKB/Swiss-Prot
  Clat_adaptor_s UniProtKB/Swiss-Prot
PhenoGen Ap3m1 PhenoGen
PIRSF Clathrin_mu UniProtKB/Swiss-Prot
PRINTS CLATHRINADPT UniProtKB/Swiss-Prot
PROSITE CLAT_ADAPTOR_M_1 UniProtKB/Swiss-Prot
  CLAT_ADAPTOR_M_2 UniProtKB/Swiss-Prot
  MHD UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011461 RatGTEx
Superfamily-SCOP SSF49447 UniProtKB/Swiss-Prot
  SSF64356 UniProtKB/Swiss-Prot
UniProt A0A8I6AGN0_RAT UniProtKB/TrEMBL
  A6KKR5 ENTREZGENE, UniProtKB/TrEMBL
  A6KKR6_RAT UniProtKB/TrEMBL
  AP3M1_RAT UniProtKB/Swiss-Prot
  F7FH36 ENTREZGENE, UniProtKB/TrEMBL
  P53676 ENTREZGENE
  Q6IRG9 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-03 Ap3m1  adaptor related protein complex 3 subunit mu 1  Ap3m1  adaptor-related protein complex 3, mu 1 subunit  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ap3m1  adaptor-related protein complex 3, mu 1 subunit    adaptor-related protein complex AP-3, mu 1 subunit  Name updated 1299863 APPROVED
2002-08-07 Ap3m1  adaptor-related protein complex AP-3, mu 1 subunit      Symbol and Name status set to provisional 70820 PROVISIONAL