Gzmc (granzyme C) - Rat Genome Database

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Gene: Gzmc (granzyme C) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Gzmc
Name: granzyme C
RGD ID: 620019
Description: Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Orthologous to human GZMB (granzyme B).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC498520; LOC691695; LOC691701; natural killer cell protease 4; RGD1563645; Rnpk-4; Rnpk4; similar to granzyme C
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81534,437,312 - 34,440,006 (-)NCBIGRCr8
mRatBN7.21530,321,653 - 30,324,347 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1530,129,076 - 30,139,105 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1530,062,897 - 30,072,172 (-)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1530,173,603 - 30,346,814 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1532,313,045 - 32,315,739 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01533,463,690 - 33,466,384 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01531,721,769 - 31,724,463 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01535,392,158 - 35,394,787 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1536,448,971 - 36,451,720 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1535,392,162 - 35,394,792 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01539,275,246 - 39,277,875 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41535,173,371 - 35,176,000 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11535,189,071 - 35,191,700 (-)NCBI
Celera1529,858,096 - 29,860,821 (-)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
proteolysis  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. P-4 and RNKP-7, new granzyme-like serine proteases expressed in activated rat lymphocytes. Ewoldt GR, etal., J Immunol 1997 May 15;158(10):4574-83.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Gzmc
211 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3
Count of miRNA genes:3
Interacting mature miRNAs:3
Transcripts:ENSRNOT00000028058
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)151985656634924750Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat

Markers in Region
RH131619  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map15p12UniSTS
Gzmc  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21530,321,840 - 30,322,533 (+)MAPPERmRatBN7.2
Rnor_6.01536,449,158 - 36,449,850NCBIRnor6.0
Rnor_6.01535,392,346 - 35,393,038NCBIRnor6.0
Rnor_5.01540,303,169 - 40,303,861UniSTSRnor5.0
Rnor_5.01539,275,434 - 39,276,126UniSTSRnor5.0
Celera1530,043,098 - 30,043,790UniSTS
Cytogenetic Map15p12UniSTS
AI323531  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21530,321,705 - 30,321,843 (+)MAPPERmRatBN7.2
Rnor_6.01535,392,211 - 35,392,348NCBIRnor6.0
Rnor_6.01536,449,023 - 36,449,160NCBIRnor6.0
Rnor_5.01540,303,034 - 40,303,171UniSTSRnor5.0
Rnor_5.01539,275,299 - 39,275,436UniSTSRnor5.0
Cytogenetic Map15p12UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_134332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017604972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ221940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ222898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ229994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT878764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U57062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000028058   ⟹   ENSRNOP00000028057
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,129,076 - 30,139,105 (-)Ensembl
Rnor_6.0 Ensembl1535,392,162 - 35,394,792 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000041430   ⟹   ENSRNOP00000040429
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,218,074 - 30,346,814 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000045209   ⟹   ENSRNOP00000043259
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,218,653 - 30,346,814 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000059660   ⟹   ENSRNOP00000056412
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,173,609 - 30,346,806 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000071692   ⟹   ENSRNOP00000064418
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,218,653 - 30,221,297 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000075752   ⟹   ENSRNOP00000064656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,321,658 - 30,324,389 (-)Ensembl
Rnor_6.0 Ensembl1536,448,971 - 36,451,720 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000083961   ⟹   ENSRNOP00000075556
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,343,362 - 30,346,772 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105501   ⟹   ENSRNOP00000092620
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,062,897 - 30,072,172 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000110630   ⟹   ENSRNOP00000082885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,173,603 - 30,176,511 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000118970   ⟹   ENSRNOP00000092778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1530,218,653 - 30,221,565 (-)Ensembl
RefSeq Acc Id: NM_134332   ⟹   NP_599159
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81534,437,312 - 34,440,006 (-)NCBI
mRatBN7.21530,321,653 - 30,324,347 (-)NCBI
Rnor_6.01535,392,158 - 35,394,787 (-)NCBI
Rnor_5.01539,275,246 - 39,277,875 (-)NCBI
RGSC_v3.41535,173,371 - 35,176,000 (-)RGD
Celera1530,042,910 - 30,045,539 (-)RGD
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_599159   ⟸   NM_134332
- Peptide Label: precursor
- UniProtKB: Q63636 (UniProtKB/TrEMBL),   M0R5I8 (UniProtKB/TrEMBL),   A6KH93 (UniProtKB/TrEMBL),   A0A8I6GJW0 (UniProtKB/TrEMBL),   A0A0S3CWG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000028057   ⟸   ENSRNOT00000028058
RefSeq Acc Id: ENSRNOP00000064656   ⟸   ENSRNOT00000075752
RefSeq Acc Id: ENSRNOP00000092620   ⟸   ENSRNOT00000105501
RefSeq Acc Id: ENSRNOP00000075556   ⟸   ENSRNOT00000083961
RefSeq Acc Id: ENSRNOP00000082885   ⟸   ENSRNOT00000110630
RefSeq Acc Id: ENSRNOP00000040429   ⟸   ENSRNOT00000041430
RefSeq Acc Id: ENSRNOP00000064418   ⟸   ENSRNOT00000071692
RefSeq Acc Id: ENSRNOP00000056412   ⟸   ENSRNOT00000059660
RefSeq Acc Id: ENSRNOP00000092778   ⟸   ENSRNOT00000118970
RefSeq Acc Id: ENSRNOP00000043259   ⟸   ENSRNOT00000045209
Protein Domains
Peptidase S1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q63636-F1-model_v2 AlphaFold Q63636 1-248 view protein structure
AF-M0R5I8-F1-model_v2 AlphaFold M0R5I8 1-283 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620019 AgrOrtholog
BioCyc Gene G2FUF-13638 BioCyc
Ensembl Genes ENSRNOG00000030018 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000045641 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000049976 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000028058.7 UniProtKB/TrEMBL
  ENSRNOT00000071692.2 UniProtKB/TrEMBL
  ENSRNOT00000075752 ENTREZGENE
  ENSRNOT00000075752.3 UniProtKB/TrEMBL
  ENSRNOT00000083961.2 UniProtKB/TrEMBL
  ENSRNOT00000105501.1 UniProtKB/TrEMBL
  ENSRNOT00000110630.1 UniProtKB/TrEMBL
  ENSRNOT00000118970.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
InterPro Peptidase_S1/S6_AS UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1_S6 UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  Ser/Cys_Pept_Trypsin-like UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
KEGG Report rno:171290 UniProtKB/TrEMBL
NCBI Gene 171290 ENTREZGENE
PANTHER GRANZYME B UniProtKB/TrEMBL
  GRANZYME C UniProtKB/TrEMBL
  KALLIKREIN-RELATED UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/TrEMBL
PhenoGen Gzmc PhenoGen
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
PROSITE TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
RatGTEx ENSRNOG00000030018 RatGTEx
  ENSRNOG00000045641 RatGTEx
  ENSRNOG00000049976 RatGTEx
SMART Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP Pept_Ser_Cys UniProtKB/TrEMBL
UniProt A0A0S3CWG6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZY48_RAT UniProtKB/TrEMBL
  A0A8I6AIL5_RAT UniProtKB/TrEMBL
  A0A8I6GJW0 ENTREZGENE, UniProtKB/TrEMBL
  A1L119_RAT UniProtKB/TrEMBL
  A6KH93 ENTREZGENE
  F7FJN4_RAT UniProtKB/TrEMBL
  M0R4W8_RAT UniProtKB/TrEMBL
  M0R5I8 ENTREZGENE
  Q63636 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A6KH93 UniProtKB/TrEMBL
  M0R5I8 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Gzmc  granzyme C  LOC691695  similar to granzyme C  Data merged from RGD:1597199 737654 PROVISIONAL
2015-07-29 Gzmc  granzyme C  RGD1563645  similar to granzyme C  Data merged from RGD:1563645 737654 PROVISIONAL
2011-10-27 RGD1563645  similar to granzyme C  LOC691701  similar to granzyme C  Data merged from RGD:1596012 737654 APPROVED
2008-04-30 RGD1563645  similar to granzyme C   RGD1563645_predicted  similar to granzyme C (predicted)  'predicted' is removed 2292626 APPROVED
2006-11-20 LOC691701  similar to granzyme C      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC691695  similar to granzyme C      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-03-07 RGD1563645_predicted  similar to granzyme C (predicted)  LOC498520  similar to granzyme C  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC498520  similar to granzyme C      Symbol and Name status set to provisional 70820 PROVISIONAL
2004-09-10 Gzmc  granzyme C      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Gzmc  granzyme C      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_protein 248 amino acids 632834