Ptgis (prostaglandin I2 synthase) - Rat Genome Database

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Gene: Ptgis (prostaglandin I2 synthase) Rattus norvegicus
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Symbol: Ptgis
Name: prostaglandin I2 synthase
RGD ID: 3438
Description: Enables prostaglandin-I synthase activity. Involved in several processes, including cellular response to estradiol stimulus; negative regulation of smooth muscle cell proliferation; and prostaglandin biosynthetic process. Predicted to be located in caveola; endoplasmic reticulum membrane; and nucleus. Used to study cerebral infarction; congestive heart failure; ischemia (multiple); and pulmonary hypertension. Biomarker of hypertension. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); cerebrovascular disease (multiple); colorectal adenoma; limb ischemia; and primary pulmonary hypertension. Orthologous to human PTGIS (prostaglandin I2 synthase); PARTICIPATES IN prostacyclin biosynthetic pathway; acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; INTERACTS WITH (R)-carnitine; 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hydroperoxy icosatetraenoate dehydratase; PGIS; prostacyclin synthase; prostaglandin I2 (prostacyclin) synthase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83176,347,589 - 176,383,251 (-)NCBIGRCr8
mRatBN7.23155,928,564 - 155,964,228 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3155,916,412 - 155,965,451 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3159,730,001 - 159,765,702 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03168,228,974 - 168,264,675 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03165,970,684 - 166,006,385 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03163,950,746 - 163,986,129 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03170,109,317 - 170,143,882 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43158,356,878 - 158,387,984 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13158,262,914 - 158,294,020 (-)NCBI
Celera3154,508,773 - 154,544,997 (-)NCBICelera
Cytogenetic Map3q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
PtgisRatArterial Occlusive Diseases exacerbatesISOPTGIS (Homo sapiens)401959400associated with cerebral infarction more ...RGD 
PtgisRatatherosclerosis  ISOPTGIS (Homo sapiens)401959395mRNA:decreased expression:artery (human)RGD 
PtgisRatbrain ischemia  IDA 8693629 RGD 
PtgisRatCarotid Artery Injuries treatmentIMP 401960092 RGD 
PtgisRatCarotid Artery Injuries treatmentISOPTGIS (Homo sapiens)401901254human gene in a rat modelRGD 
PtgisRatCarotid Artery Injuries treatmentIMP 401959739 RGD 
PtgisRatCarotid Artery Injuries treatmentIMP 401959382 RGD 
PtgisRatcarotid stenosis  ISOPTGIS (Homo sapiens)401959402associated with cerebral infarction and DNA:SNP:3' utr: (rs5602) (human)RGD 
PtgisRatcerebral cavernous malformation 1 exacerbatesISOPTGIS (Homo sapiens)401960081DNA:silent mutation:CDS:p.L256L (rs5628) (human)RGD 
PtgisRatcerebral infarction exacerbatesISOPTGIS (Homo sapiens)401959400DNA:SNPs:exon more ...RGD 
PtgisRatcerebral infarction  ISOPTGIS (Homo sapiens)401901149DNA:SNP and haplotype:3' utr: (rs5602) (human)RGD 
PtgisRatcerebral infarction treatmentIMP 401901194 RGD 
PtgisRatcerebral infarction  ISOPTGIS (Homo sapiens)401901269DNA:repeat:promoter:g.-6(CCGCCAGCC)3-7 (human)RGD 
PtgisRatcolon cancer exacerbatesISOPtgis (Mus musculus)11536046 RGD 
PtgisRatcolorectal adenoma susceptibilityISOPTGIS (Homo sapiens)151347835DNA:repeats:promoter:RGD 
PtgisRatcongestive heart failure treatmentIDA 401960097 RGD 
PtgisRatEndotoxemia treatmentIMP 401960076 RGD 
PtgisRatExperimental Diabetes Mellitus treatmentIEP 401960094 RGD 
PtgisRathypertension  ISOPTGIS (Homo sapiens)1298040 RGD 
PtgisRathypertension  ISOPTGIS (Homo sapiens)401959586DNA:repeat:promoter:g.-6(CCGCCAGCC)3-4 (human)RGD 
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PtgisRatChildhood Schizophrenia  ISOPTGIS (Homo sapiens)8554872ClinVar Annotator: match by term: Childhood-onset schizophreniaClinVarPMID:26508570
PtgisRatessential hypertension  ISOPTGIS (Homo sapiens)8554872ClinVar more ...ClinVarPMID:12372404 and PMID:25741868
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PtgisRatautism spectrum disorder  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:35663546
PtgisRatessential hypertension  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTD 
PtgisRatLung Neoplasms  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: therapeuticCTDPMID:11830527
PtgisRatpatent ductus arteriosus  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:19336370
PtgisRatSpontaneous Abortions  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18539642
PtgisRatStevens-Johnson syndrome  ISOPTGIS (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25811541
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PtgisRatessential hypertension  ISOPTGIS (Homo sapiens)7240710 OMIM 

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PtgisRat(R)-carnitine increases response to substanceEXP 6480464PTGIS protein results in increased susceptibility to CarnitineCTDPMID:19491382
PtgisRat(R)-carnitine multiple interactionsEXP 6480464[Carnitine results in increased expression of PTGIS mRNA] which results in increased chemical synthesis of 6-Ketoprostaglandin F1 alphaCTDPMID:19491382
PtgisRat(R)-carnitine increases expressionEXP 6480464Carnitine results in increased expression of PTGIS mRNACTDPMID:19491382
PtgisRat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane multiple interactionsEXP 64804642 more ...CTDPMID:19414516
PtgisRat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of PTGIS mRNACTDPMID:12075121
PtgisRat17alpha-ethynylestradiol multiple interactionsISOPtgis (Mus musculus)6480464[Ibuprofen co-treated with hydroxyibuprofen co-treated with Diclofenac co-treated with Ethinyl Estradiol] results in decreased expression of PTGIS mRNACTDPMID:37844793
PtgisRat17beta-estradiol increases expressionISOPtgis (Mus musculus)6480464Estradiol results in increased expression of PTGIS mRNACTDPMID:19484750
PtgisRat17beta-estradiol increases expression EXP 40196007817beta-estradiol increases expression of Ptgis protein in cerebral blood vesselsRGD 
PtgisRat17beta-estradiol decreases expressionISOPtgis (Mus musculus)6480464Estradiol results in decreased expression of PTGIS mRNACTDPMID:39298647
PtgisRat17beta-estradiol decreases expression EXP 401960094Beta-estradiol decreases expression of Ptgis protein in aortic endothelial cellsRGD 
PtgisRat2,3',4,4',5-Pentachlorobiphenyl increases expressionISOPtgis (Mus musculus)64804642 more ...CTDPMID:31388691
PtgisRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPtgis (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of PTGIS mRNACTDPMID:15591033
PtgisRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of PTGIS mRNACTDPMID:34747641
PtgisRat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOPtgis (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of PTGIS mRNACTDPMID:28213091
PtgisRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PTGIS mRNACTDPMID:11752688 more ...
PtgisRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOPtgis (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of PTGIS mRNACTDPMID:21570461
PtgisRat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of PTGIS mRNACTDPMID:22298810
PtgisRat2,3,7,8-Tetrachlorodibenzofuran decreases expressionEXP 64804642 more ...CTDPMID:21724226
PtgisRat2,4,6-trinitrobenzenesulfonic acid increases expressionEXP 6480464Trinitrobenzenesulfonic Acid results in increased expression of PTGIS mRNACTDPMID:25526689
PtgisRat2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOPtgis (Mus musculus)64804642 more ...CTDPMID:38648751

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Biological Process
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PtgisRatapoptotic signaling pathway involved_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatapoptotic signaling pathway involved_inISOPTGIS (Homo sapiens)1624291 PMID:11551955RGDPMID:11551955
PtgisRatcellular response to estradiol stimulus  IEP 401960094 RGD 
PtgisRatcellular response to hypoxia involved_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatcellular response to hypoxia  IMP 401960096 RGD 
PtgisRatcellular response to hypoxia involved_inISOPTGIS (Homo sapiens)1624291 PMID:21296955RGDPMID:21296955
PtgisRatcellular response to hypoxia involved_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatcellular response to interleukin-1 involved_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatcellular response to interleukin-1 involved_inISOPTGIS (Homo sapiens)1624291 PMID:8185632RGDPMID:8185632
PtgisRatcellular response to interleukin-1 involved_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatcellular response to interleukin-6 involved_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatcellular response to interleukin-6 involved_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatcellular response to interleukin-6 involved_inISOPTGIS (Homo sapiens)1624291 PMID:8185632RGDPMID:8185632
PtgisRatcellular response to tumor necrosis factor  IEP 401959403and macrophage migration inhibitory factorRGD 
PtgisRatcyclooxygenase pathway involved_inISOPtgis (Mus musculus)1624291 PMID:17328923RGDPMID:17328923
PtgisRatdecidualization acts_upstream_of_or_withinISOPtgis (Mus musculus)1624291 PMID:10385625RGDPMID:10385625
PtgisRatdecidualization acts_upstream_of_or_withinIEAUniProtKB:O35074 and ensembl:ENSMUSP000000181131600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatembryo implantation acts_upstream_of_or_withinISOPtgis (Mus musculus)1624291 PMID:10385625RGDPMID:10385625
PtgisRatembryo implantation acts_upstream_of_or_withinIEAUniProtKB:O35074 and ensembl:ENSMUSP000000181131600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatfatty acid biosynthetic process involved_inIEAUniProtKB-KW:KW-02751600115GO_REF:0000043UniProtGO_REF:0000043
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Cellular Component
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PtgisRatcaveola located_inISOPTGIS (Homo sapiens)1624291 PMID:20122998RGDPMID:20122998
PtgisRatcaveola located_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatcaveola located_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatcytoplasm located_inISOPtgis (Mus musculus)1624291 PMID:10385625RGDPMID:10385625
PtgisRatcytoplasm located_inIEAUniProtKB:O35074 and ensembl:ENSMUSP000000181131600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatendoplasmic reticulum located_inIEAUniProtKB-KW:KW-02561600115GO_REF:0000043UniProtGO_REF:0000043
PtgisRatendoplasmic reticulum located_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatendoplasmic reticulum located_inISOPTGIS (Homo sapiens)1624291 PMID:21035466RGDPMID:21035466
PtgisRatendoplasmic reticulum located_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatendoplasmic reticulum lumen is_active_inISOPtgis (Mus musculus)1624291 PMID:12403673RGDPMID:12403673
PtgisRatendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-00971600115GO_REF:0000044UniProtGO_REF:0000044
PtgisRatendoplasmic reticulum membrane located_inIEAUniRule:UR0001205381600115GO_REF:0000104UniProtGO_REF:0000104
PtgisRatendoplasmic reticulum membrane located_inISSUniProtKB:Q296261600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
PtgisRatnucleus located_inISOPTGIS (Homo sapiens)1624291 PMID:21035466RGDPMID:21035466
PtgisRatnucleus located_inIEAUniProtKB:O35074 and ensembl:ENSMUSP000000181131600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatnucleus located_inISOPtgis (Mus musculus)1624291 PMID:10385625RGDPMID:10385625
PtgisRatnucleus located_inISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRatnucleus located_inIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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PtgisRatheme binding enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatheme binding enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatheme binding enablesISOPTGIS (Homo sapiens)1624291 PMID:17020766 and PMID:18032380RGDPMID:17020766 and PMID:18032380
PtgisRatheme binding enablesIEAUniProtKB:Q16647 and ensembl:ENSP000002440431600115GO_REF:0000107EnsemblGO_REF:0000107
PtgisRatheme binding enablesISSUniProtKB:Q166471600115GO_REF:0000024UniProtGO_REF:0000024
PtgisRathydroperoxy icosatetraenoate dehydratase activity enablesIEARHEA:555561600115GO_REF:0000116RHEAGO_REF:0000116
PtgisRathydroperoxy icosatetraenoate dehydratase activity enablesIEAEC:4.2.1.1521600115GO_REF:0000003UniProtGO_REF:0000003
PtgisRatiron ion binding enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatiron ion binding enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatisomerase activity enablesIEAUniProtKB-KW:KW-04131600115GO_REF:0000043UniProtGO_REF:0000043
PtgisRatlyase activity enablesIEAUniProtKB-KW:KW-04561600115GO_REF:0000043UniProtGO_REF:0000043
PtgisRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
PtgisRatmonooxygenase activity enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen enablesIEAInterPro:IPR001128 more ...1600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatprostaglandin-I synthase activity  IMP 727270 RGD 
PtgisRatprostaglandin-I synthase activity enablesIEARHEA:235801600115GO_REF:0000116RHEAGO_REF:0000116
PtgisRatprostaglandin-I synthase activity enablesIBAPANTHER:PTN002802420 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
PtgisRatprostaglandin-I synthase activity enablesIEAInterPro:IPR0272861600115GO_REF:0000002InterProGO_REF:0000002
PtgisRatprostaglandin-I synthase activity enablesISOPtgis (Mus musculus)1624291MGI:3610729 PMID:33582554RGDPMID:33582554
PtgisRatprostaglandin-I synthase activity enablesISOPTGIS (Homo sapiens)1624291 PMID:15115769 more ...RGDPMID:15115769 more ...
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RGD Manual Annotations


  
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Original Reference(s)
PtgisRatprostacyclin biosynthetic pathway  ISOPTGIS (Homo sapiens)8552712 RGD 
PtgisRatprostacyclin biosynthetic pathway  IMP 401960092 RGD 
PtgisRatprostacyclin biosynthetic pathway  IMP 401959739 RGD 

Imported Annotations - SMPDB

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PtgisRatacetylsalicylic acid pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00083
PtgisRatantipyrine drug pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00692
PtgisRatarachidonic acid metabolic pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00075
PtgisRatcelecoxib pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00096
PtgisRatdiclofenac pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00093
PtgisRatdiflunisal pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00289
PtgisRatetodolac pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00084
PtgisRatfenoprofen pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00696
PtgisRatflurbiprofen pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00697
PtgisRatibuprofen pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00086
PtgisRatindometacin pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00104
PtgisRatindometacin pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00104
PtgisRatketoprofen pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00085
PtgisRatketorolac pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00098
PtgisRatleukotriene C4 synthase deficiency pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00353
PtgisRatlornoxicam pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00700
PtgisRatmagnesium salicylate pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00698
PtgisRatmefenamic acid pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00109
PtgisRatmeloxicam pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00106
PtgisRatnabumetone pharmacodynamics pathway  ISOPTGIS (Homo sapiens)10402751 SMPDBSMP:00114
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Imported Annotations - KEGG (archival)

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PtgisRatarachidonic acid metabolic pathway  IEA 6907045 KEGGrno:00590

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#
Reference Title
Reference Citation
1. Increased pulmonary prostacyclin synthesis in rats with chronic hypoxic pulmonary hypertension. Blumberg FC, etal., Cardiovasc Res. 2002 Jul;55(1):171-7. doi: 10.1016/s0008-6363(02)00318-8.
2. Endothelial prostacyclin protects the kidney from ischemia-reperfusion injury. Cao Y, etal., Pflugers Arch. 2019 Apr;471(4):543-555. doi: 10.1007/s00424-018-2229-6. Epub 2018 Nov 9.
3. Cytochrome P450 and matrix metalloproteinase genetic modifiers of disease severity in Cerebral Cavernous Malformation type 1. Choquet H, etal., Free Radic Biol Med. 2016 Mar;92:100-109. doi: 10.1016/j.freeradbiomed.2016.01.008. Epub 2016 Jan 19.
4. Determination of genetic predisposition to patent ductus arteriosus in preterm infants. Dagle JM, etal., Pediatrics. 2009 Apr;123(4):1116-23. doi: 10.1542/peds.2008-0313.
5. Altered expression of inflammation-related genes in human carotid atherosclerotic plaques. Di Taranto MD, etal., Atherosclerosis. 2012 Jan;220(1):93-101. doi: 10.1016/j.atherosclerosis.2011.10.022. Epub 2011 Oct 25.
6. Insulin resistance reduces arterial prostacyclin synthase and eNOS activities by increasing endothelial fatty acid oxidation. Du X, etal., J Clin Invest. 2006 Apr;116(4):1071-80. doi: 10.1172/JCI23354. Epub 2006 Mar 9.
7. Pyrrolizidine alkaloid-induced alterations of prostanoid synthesis in human endothelial cells. Ebmeyer J, etal., Chem Biol Interact. 2019 Jan 25;298:104-111. doi: 10.1016/j.cbi.2018.11.007. Epub 2018 Nov 19.
8. Induction of prostacyclin/PGI2 synthase expression after cerebral ischemia-reperfusion. Fang YC, etal., J Cereb Blood Flow Metab. 2006 Apr;26(4):491-501.
9. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10. Pulmonary prostacyclin synthase overexpression in transgenic mice protects against development of hypoxic pulmonary hypertension. Geraci MW, etal., J Clin Invest 1999 Jun;103(11):1509-15.
11. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
12. Prostacyclin synthase gene transfer inhibits neointimal formation in rat balloon-injured arteries without bleeding complications. Harada M, etal., Cardiovasc Res. 1999 Aug 1;43(2):481-91. doi: 10.1016/s0008-6363(99)00107-8.
13. Enhanced therapeutic angiogenesis by cotransfection of prostacyclin synthase gene or optimization of intramuscular injection of naked plasmid DNA. Hiraoka K, etal., Circulation. 2003 Nov 25;108(21):2689-96. doi: 10.1161/01.CIR.0000093275.78676.F4. Epub 2003 Oct 20.
14. Prostacyclin synthase gene transfer inhibits neointimal formation by suppressing PPAR delta expression. Imai H, etal., Atherosclerosis. 2007 Dec;195(2):322-32. doi: 10.1016/j.atherosclerosis.2007.01.010. Epub 2007 Feb 14.
15. Mesenchymal stem cell-based gene therapy with prostacyclin synthase enhanced neovascularization in hindlimb ischemia. Ishii M, etal., Atherosclerosis. 2009 Sep;206(1):109-18. doi: 10.1016/j.atherosclerosis.2009.02.023. Epub 2009 Mar 11.
16. Adenoassociated virus-mediated prostacyclin synthase expression prevents pulmonary arterial hypertension in rats. Ito T, etal., Hypertension. 2007 Sep;50(3):531-6. doi: 10.1161/HYPERTENSIONAHA.107.091348. Epub 2007 Jul 16.
17. Effects of IL-1beta, TNF-alpha, and macrophage migration inhibitory factor on prostacyclin synthesis in rat pulmonary artery smooth muscle cells. Itoh A, etal., Respirology. 2003 Dec;8(4):467-72. doi: 10.1046/j.1440-1843.2003.00491.x.
18. Human prostacyclin synthase gene and hypertension : the Suita Study. Iwai N, etal., Circulation. 1999 Nov 30;100(22):2231-6. doi: 10.1161/01.cir.100.22.2231.
19. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
20. Enhanced angiogenesis and improvement of neuropathy by cotransfection of human hepatocyte growth factor and prostacyclin synthase gene. Koike H, etal., FASEB J. 2003 Apr;17(6):779-81. doi: 10.1096/fj.02-0754fje. Epub 2003 Feb 5.
1 to 20 of 66 rows
PMID:8185632   PMID:10385625   PMID:11551955   PMID:15115769   PMID:15489334   PMID:17020766   PMID:17825254   PMID:17951541   PMID:18032380   PMID:20122998   PMID:20159982   PMID:20925195  
PMID:21035466   PMID:21296955   PMID:24141169   PMID:27923787   PMID:31505169  



Ptgis
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83176,347,589 - 176,383,251 (-)NCBIGRCr8
mRatBN7.23155,928,564 - 155,964,228 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3155,916,412 - 155,965,451 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3159,730,001 - 159,765,702 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03168,228,974 - 168,264,675 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03165,970,684 - 166,006,385 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03163,950,746 - 163,986,129 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03170,109,317 - 170,143,882 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43158,356,878 - 158,387,984 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13158,262,914 - 158,294,020 (-)NCBI
Celera3154,508,773 - 154,544,997 (-)NCBICelera
Cytogenetic Map3q42NCBI
PTGIS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382049,503,874 - 49,568,137 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2049,503,874 - 49,568,137 (-)EnsemblGRCh38hg38GRCh38
GRCh372048,120,411 - 48,184,674 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362047,553,818 - 47,618,114 (-)NCBINCBI36Build 36hg18NCBI36
Build 342047,553,820 - 47,618,114NCBI
Celera2044,825,044 - 44,889,311 (-)NCBICelera
Cytogenetic Map20q13.13NCBI
HuRef2044,868,991 - 44,933,099 (-)NCBIHuRef
CHM1_12048,024,824 - 48,089,470 (-)NCBICHM1_1
T2T-CHM13v2.02051,273,490 - 51,337,709 (-)NCBIT2T-CHM13v2.0
Ptgis
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392167,045,114 - 167,095,069 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2167,033,725 - 167,082,524 (-)EnsemblGRCm39 Ensembl
GRCm382167,203,194 - 167,252,150 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2167,191,805 - 167,240,604 (-)EnsemblGRCm38mm10GRCm38
MGSCv372167,028,696 - 167,066,037 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362166,894,401 - 166,931,742 (-)NCBIMGSCv36mm8
Celera2173,143,332 - 173,180,671 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map287.22NCBI
Ptgis
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554458,623,430 - 8,677,658 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554458,624,228 - 8,663,385 (+)NCBIChiLan1.0ChiLan1.0
PTGIS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22155,244,765 - 55,309,216 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12055,237,848 - 55,302,529 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02045,841,238 - 45,905,641 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12046,909,010 - 46,952,850 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2046,905,665 - 46,971,612 (-)Ensemblpanpan1.1panPan2
PTGIS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12436,129,091 - 36,162,525 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2436,132,173 - 36,162,509 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2435,371,271 - 35,411,412 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02436,836,800 - 36,873,631 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2436,821,516 - 36,873,620 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12436,074,715 - 36,114,829 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02436,208,769 - 36,248,925 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02436,750,911 - 36,791,264 (-)NCBIUU_Cfam_GSD_1.0
Ptgis
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640189,336,652 - 189,360,405 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365144,791,031 - 4,812,027 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365144,775,884 - 4,814,574 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTGIS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1751,153,154 - 51,200,300 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11751,153,151 - 51,200,515 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21757,474,357 - 57,521,683 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PTGIS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1214,420,318 - 14,484,667 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl214,441,983 - 14,488,264 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605062,907,161 - 62,972,792 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ptgis
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247905,850,810 - 5,886,014 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247905,850,647 - 5,885,754 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Ptgis
171 total Variants

Predicted Target Of
Summary Value
Count of predictions:43
Count of miRNA genes:41
Interacting mature miRNAs:43
Transcripts:ENSRNOT00000010891
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3145925360166177555Rat
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145925360166177555Rat
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
1300113Bp176Blood pressure QTL 1763.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3145956084157309487Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3145925360166177555Rat
1598877Bp285Blood pressure QTL 2851.50.03arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3120538241165538241Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3130656562169034231Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3145925360166177555Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3145925360166177555Rat

1 to 10 of 36 rows
D3Got155  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23155,951,423 - 155,951,573 (+)MAPPERmRatBN7.2
Rnor_6.03163,973,327 - 163,973,476NCBIRnor6.0
Rnor_5.03170,131,080 - 170,131,229UniSTSRnor5.0
Celera3154,532,212 - 154,532,361UniSTS
RH 3.4 Map31441.6RGD
RH 3.4 Map31441.6UniSTS
Cytogenetic Map3q42UniSTS
AW529446  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23155,943,587 - 155,943,756 (+)MAPPERmRatBN7.2
Rnor_6.03163,965,193 - 163,965,361NCBIRnor6.0
Rnor_5.03170,124,593 - 170,124,761UniSTSRnor5.0
Celera3154,524,558 - 154,524,726UniSTS
RH 3.4 Map31442.4UniSTS
Cytogenetic Map3q42UniSTS
RH130734  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23155,928,598 - 155,928,784 (-)MAPPERmRatBN7.2
mRatBN7.23155,928,598 - 155,928,784 (+)MAPPERmRatBN7.2
mRatBN7.21152,245,400 - 52,245,586 (-)MAPPERmRatBN7.2
mRatBN7.21152,245,400 - 52,245,586 (+)MAPPERmRatBN7.2
Rnor_6.01154,830,061 - 54,830,246NCBIRnor6.0
Rnor_6.03163,950,781 - 163,950,966NCBIRnor6.0
Rnor_5.03170,109,352 - 170,109,537UniSTSRnor5.0
Rnor_5.01157,988,636 - 57,988,821UniSTSRnor5.0
RGSC_v3.43158,356,913 - 158,357,098UniSTSRGSC3.4
RGSC_v3.41153,492,284 - 53,492,469UniSTSRGSC3.4
Celera1151,841,764 - 51,841,949UniSTS
Celera3154,508,808 - 154,508,993UniSTS
RH 3.4 Map2755.19UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map3q42UniSTS
BI275702  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23155,931,041 - 155,931,252 (+)MAPPERmRatBN7.2
Rnor_6.03163,953,224 - 163,953,434NCBIRnor6.0
Rnor_5.03170,111,795 - 170,112,005UniSTSRnor5.0
Celera3154,511,251 - 154,511,461UniSTS
RH 3.4 Map31441.5UniSTS
Cytogenetic Map3q42UniSTS







Ensembl Acc Id: ENSRNOT00000010891   ⟹   ENSRNOP00000010891
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3155,928,564 - 155,951,645 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000082474   ⟹   ENSRNOP00000074093
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3155,928,564 - 155,953,292 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000103286   ⟹   ENSRNOP00000088713
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3155,916,412 - 155,965,451 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000105814   ⟹   ENSRNOP00000077774
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3155,925,619 - 155,964,267 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000115486   ⟹   ENSRNOP00000087709
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3155,928,570 - 155,965,451 (-)Ensembl
RefSeq Acc Id: NM_031557   ⟹   NP_113745
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83176,347,589 - 176,383,251 (-)NCBI
mRatBN7.23155,928,564 - 155,964,228 (-)NCBI
Rnor_6.03163,950,746 - 163,986,129 (-)NCBI
Rnor_5.03170,109,317 - 170,143,882 (-)NCBI
RGSC_v3.43158,356,878 - 158,387,984 (-)RGD
Celera3154,508,773 - 154,544,997 (-)RGD
Sequence:
RefSeq Acc Id: XM_039104378   ⟹   XP_038960306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83176,347,589 - 176,371,870 (-)NCBI
mRatBN7.23155,928,564 - 155,952,790 (-)NCBI
Protein RefSeqs NP_113745 (Get FASTA)   NCBI Sequence Viewer  
  XP_038960306 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB02322 (Get FASTA)   NCBI Sequence Viewer  
  AAH61814 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074093
  ENSRNOP00000087709
  ENSRNOP00000087709.1
GenBank Protein Q62969 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_113745   ⟸   NM_031557
- UniProtKB: Q62969 (UniProtKB/Swiss-Prot),   A6JXJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038960306   ⟸   XM_039104378
- Peptide Label: isoform X1
- UniProtKB: A0A0G2K776 (UniProtKB/TrEMBL),   F1LP67 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000087709   ⟸   ENSRNOT00000115486
Ensembl Acc Id: ENSRNOP00000074093   ⟸   ENSRNOT00000082474
Ensembl Acc Id: ENSRNOP00000010891   ⟸   ENSRNOT00000010891

Name Modeler Protein Id AA Range Protein Structure
AF-A0A0G2K776-F1-model_v2 AlphaFold A0A0G2K776 1-500 view protein structure
AF-Q62969-F1-model_v2 AlphaFold Q62969 1-501 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 34 of 34 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-46744 BioCyc
BioCyc Pathway PWY66-374 [C20 prostanoid biosynthesis] BioCyc
BioCyc Pathway Image PWY66-374 BioCyc
Ensembl Genes ENSRNOG00000008245 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000082474 ENTREZGENE
  ENSRNOT00000115486 ENTREZGENE
  ENSRNOT00000115486.1 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.630.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:5598666 IMAGE-MGC_LOAD
InterPro Cyt_P450 UniProtKB/Swiss-Prot
  Cyt_P450_CYP7A1-type UniProtKB/Swiss-Prot
  Cyt_P450_E_grp-IV UniProtKB/Swiss-Prot
  Cyt_P450_sf UniProtKB/Swiss-Prot
  PTGIS UniProtKB/Swiss-Prot
KEGG Report rno:25527 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72400 IMAGE-MGC_LOAD
NCBI Gene 25527 ENTREZGENE
PANTHER PTHR24306 UniProtKB/Swiss-Prot
  PTHR24306:SF4 UniProtKB/Swiss-Prot
Pfam p450 UniProtKB/Swiss-Prot
PharmGKB PTGIS RGD
PhenoGen Ptgis PhenoGen
PIRSF Cytochrome_CYPVIIA1 UniProtKB/Swiss-Prot
  PTGIS UniProtKB/Swiss-Prot
PRINTS EP450IV UniProtKB/Swiss-Prot
  P450 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000008245 RatGTEx
Superfamily-SCOP SSF48264 UniProtKB/Swiss-Prot
UniProt A0A0G2K776 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5Y1K4_RAT UniProtKB/TrEMBL
  A0A8I6ABA7_RAT UniProtKB/TrEMBL
  A6JXJ3 ENTREZGENE, UniProtKB/TrEMBL
  F1LP67 ENTREZGENE, UniProtKB/TrEMBL
  PTGIS_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 34 of 34 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-09-21 Ptgis  prostaglandin I2 synthase  Ptgis  prostaglandin I2 (prostacyclin) synthase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ptgis  prostaglandin I2 (prostacyclin) synthase    prostaglandin I2 synthase   Name updated 1299863 APPROVED
2003-04-09 Ptgis  prostaglandin I2 synthase     Prostaglandin I2 (prostacyclin) synthase  Name updated 629478 APPROVED
2002-06-10 Ptgis  Prostaglandin I2 (prostacyclin) synthase      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_mutations_overexpression overexpression in transgenic mice provides protection against severe pulmonary hypertension 727270