Mapk4 (mitogen-activated protein kinase 4)

Gene: Mapk4 (mitogen-activated protein kinase 4) Rattus norvegicus

Analyze

Symbol:

Mapk4

Name:

mitogen-activated protein kinase 4

RGD ID:

3047

Description:

Predicted to enable protein dimerization activity; protein kinase binding activity; and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Predicted to be active in cytoplasm and nucleus. Orthologous to human MAPK4 (mitogen-activated protein kinase 4); INTERACTS WITH 1-naphthyl isothiocyanate; 3,4-methylenedioxymethamphetamine; 3-chloropropane-1,2-diol.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

ERK-4; extracellular signal-regulated kinase 4; MAP kinase 4; MAP kinase isoform p63; MAPK 4; mitogen activated protein kinase 4; MNK2; p63-MAPK

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	69,788,058 - 69,937,524 (-)	NCBI		GRCr8
mRatBN7.2	18	67,512,805 - 67,661,271 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	67,512,807 - 67,661,842 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	69,620,897 - 69,669,673 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	70,295,745 - 70,344,543 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	68,160,877 - 68,209,680 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	69,894,692 - 70,043,634 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	69,894,684 - 69,944,632 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	69,038,436 - 69,087,394 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	70,707,645 - 70,755,517 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	70,784,791 - 70,828,233 (-)	NCBI
Celera	18	65,696,152 - 65,744,928 (-)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

intellectual disability (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1-naphthyl isothiocyanate (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,4-methylenedioxymethamphetamine (EXP)

3-chloropropane-1,2-diol (EXP)

3-isobutyl-1-methyl-7H-xanthine (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

atrazine (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

butanal (ISO)

cadmium dichloride (ISO)

calcium atom (EXP)

calcium(0) (EXP)

cantharidin (ISO)

choline (ISO)

copper atom (EXP)

copper(0) (EXP)

cypermethrin (EXP)

dexamethasone (ISO)

dibutyl phthalate (ISO)

dichromium trioxide (ISO)

endosulfan (EXP)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

L-methionine (ISO)

lead diacetate (ISO)

mercury dichloride (EXP)

methoxychlor (EXP)

mono(2-ethylhexyl) phthalate (ISO)

N-methyl-N'-nitro-N-nitrosoguanidine (ISO)

ochratoxin A (EXP,ISO)

permethrin (ISO)

pirinixic acid (ISO)

poly(I:C) (EXP)

propanal (ISO)

resveratrol (ISO)

sodium arsenite (ISO)

sulforaphane (ISO)

sunitinib (ISO)

triptonide (ISO)

valproic acid (ISO)

vancomycin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular signal transduction (IBA)

MAPK cascade (IEA)

Cellular Component

cytoplasm (IBA,IEA,ISO,ISS)

nucleus (IBA,IEA,ISO,ISS)

Molecular Function

ATP binding (IEA)

MAP kinase activity (IEA)

protein binding (ISO)

protein heterodimerization activity (IEA,ISO)

protein homodimerization activity (IEA,ISO,ISS)

protein kinase binding (IEA,ISO,ISS)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Isolation of a cDNA encoding the rat MAP-kinase homolog of human p63mapk.	Garcia JI, etal., Mamm Genome 1996 Nov;7(11):810-4.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12777378	PMID:16973613

Genomics

Comparative Map Data

Mapk4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	69,788,058 - 69,937,524 (-)	NCBI		GRCr8
mRatBN7.2	18	67,512,805 - 67,661,271 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	67,512,807 - 67,661,842 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	69,620,897 - 69,669,673 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	70,295,745 - 70,344,543 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	68,160,877 - 68,209,680 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	69,894,692 - 70,043,634 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	69,894,684 - 69,944,632 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	69,038,436 - 69,087,394 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	70,707,645 - 70,755,517 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	70,784,791 - 70,828,233 (-)	NCBI
Celera	18	65,696,152 - 65,744,928 (-)	NCBI		Celera
Cytogenetic Map	18	q12.2	NCBI

MAPK4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	50,559,612 - 50,731,826 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	50,560,087 - 50,731,826 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	48,086,457 - 48,258,196 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	46,340,482 - 46,512,194 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	46,443,835 - 46,512,189	NCBI
Celera	18	44,943,273 - 45,114,970 (+)	NCBI		Celera
Cytogenetic Map	18	q21.1-q21.2	NCBI
HuRef	18	44,941,139 - 45,112,864 (+)	NCBI		HuRef
CHM1_1	18	48,082,055 - 48,253,737 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	50,761,375 - 50,933,569 (+)	NCBI		T2T-CHM13v2.0

Mapk4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	74,061,557 - 74,198,643 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	74,061,557 - 74,198,430 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	73,928,486 - 74,065,434 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	73,928,486 - 74,065,359 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	74,088,140 - 74,224,603 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	74,053,858 - 74,190,298 (-)	NCBI		MGSCv36	mm8
Celera	18	75,153,306 - 75,290,462 (-)	NCBI		Celera
Cytogenetic Map	18	E2	NCBI
cM Map	18	50.31	NCBI

Mapk4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	35,616,701 - 35,672,035 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	35,521,398 - 35,671,977 (+)	NCBI	ChiLan1.0	ChiLan1.0

MAPK4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	68,084,494 - 68,256,160 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	53,777,098 - 53,948,764 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	43,937,446 - 44,108,709 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	47,284,492 - 47,455,477 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	47,383,072 - 47,455,477 (+)	Ensembl	panpan1.1		panPan2

MAPK4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	80,654,500 - 80,801,212 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	80,744,313 - 80,821,267 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	80,065,812 - 80,213,476 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	80,742,157 - 80,890,788 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	80,833,686 - 80,911,359 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	80,455,019 - 80,602,388 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	80,485,405 - 80,633,823 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	80,773,177 - 80,921,788 (+)	NCBI		UU_Cfam_GSD_1.0

Mapk4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	37,297,344 - 37,442,930 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936497	12,536,015 - 12,588,524 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936497	12,536,375 - 12,591,477 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAPK4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	100,107,935 - 100,291,585 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	100,107,429 - 100,291,594 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	110,082,138 - 110,155,094 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAPK4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	30,235,915 - 30,406,684 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	30,235,794 - 30,406,664 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	4,367,333 - 4,543,211 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mapk4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624778	14,106,920 - 14,267,870 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624778	14,106,931 - 14,267,794 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Mapk4
1704 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	222
Count of miRNA genes:	140
Interacting mature miRNAs:	156
Transcripts:	ENSRNOT00000020851, ENSRNOT00000047271
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578661	Bss20	Bone structure and strength QTL 20	3.7		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	18	11791518	83218561	Rat
1578667	Bss21	Bone structure and strength QTL 21	3.5		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	18	11791518	83218561	Rat
1600373	Mamtr6	Mammary tumor resistance QTL 6			mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	18	19278901	83218561	Rat
1331741	Bp232	Blood pressure QTL 232	3.59112		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	21372893	83213037	Rat
1331733	Bp233	Blood pressure QTL 233	3.97196		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	24796977	79788953	Rat
2325839	Bp348	Blood pressure QTL 348		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	25570985	70570985	Rat
2293704	Bss35	Bone structure and strength QTL 35	4.59	0.0002	femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	18	28964853	73964853	Rat
2300157	Bmd66	Bone mineral density QTL 66	13.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
2300177	Bmd65	Bone mineral density QTL 65	19.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	18	28964853	73964853	Rat
9589816	Gluco68	Glucose level QTL 68	7.25	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	29792965	74792965	Rat
8694378	Bw157	Body weight QTL 157	3.59	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	29792965	74792965	Rat
9590318	Scort22	Serum corticosterone level QTL 22	7.64	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	18	29792965	74792965	Rat
1331754	Bp230	Blood pressure QTL 230	4.61609		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	29792965	74792965	Rat
738005	Anxrr11	Anxiety related response QTL 11	3.4		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	18	30039813	75039813	Rat
61429	Cia17	Collagen induced arthritis QTL 17	4.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	31359408	70263868	Rat
2303120	Mamtr8	Mammary tumor resistance QTL 8		0.001	mammary gland integrity trait (VT:0010552)	mammary tumor growth rate (CMO:0000344)	18	31359408	83218561	Rat
631274	Sprol1	Serum protein level QTL 1	5.3		blood total protein amount (VT:0005567)	serum total protein level (CMO:0000661)	18	31393320	77209694	Rat
631518	Bw11	Body weight QTL 11	2.8		body mass (VT:0001259)	body weight (CMO:0000012)	18	35870723	80870723	Rat
61367	Iddm4	Insulin dependent diabetes mellitus QTL 4	2.33	0.0074	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	18	38192455	83192455	Rat
1598826	Anxrr20	Anxiety related response QTL 20	3.04		body movement coordination trait (VT:0005424)	number of rearing movements in an experimental apparatus (CMO:0001752)	18	41432971	83828827	Rat
6893683	Bw110	Body weight QTL 110	2.7	0.002	body mass (VT:0001259)	body weight (CMO:0000012)	18	43345022	83828827	Rat
8694366	Abfw8	Abdominal fat weight QTL 8	6.38	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	18	46640675	83828827	Rat
8694432	Bw165	Body weight QTL 165	3.81	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	18	46640675	83828827	Rat
9589041	Epfw12	Epididymal fat weight QTL 12	17.08	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	18	46640675	83828827	Rat
2303571	Bw92	Body weight QTL 92	3		body mass (VT:0001259)	body weight (CMO:0000012)	18	48520044	83828827	Rat
2303584	Gluco55	Glucose level QTL 55	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	18	48520044	83828827	Rat
738008	Hcar14	Hepatocarcinoma resistance QTL 14	4.3		liver integrity trait (VT:0010547)	liver nonremodeling tumorous lesion number (CMO:0001462)	18	51464733	83218561	Rat
1359020	Ppulsi2	Prepulse inhibition QTL 2	2.71		prepulse inhibition trait (VT:0003088)	acoustic startle response measurement (CMO:0001519)	18	52292875	73997283	Rat
631509	Sald2	Serum aldosterone level QTL 2	2.9		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	18	52539763	69140759	Rat
12880368	Bw187	Body weight QTL 187		0.045	body mass (VT:0001259)	body weight (CMO:0000012)	18	52539763	76104388	Rat
12904067	Cm122	Cardiac mass QTL 122		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	18	52539763	76104388	Rat
12904069	Cm123	Cardiac mass QTL 123		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	18	52539763	76104388	Rat
12904070	Cm124	Cardiac mass QTL 124		0.01	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	18	52539763	76104388	Rat
12904071	Am18	Aortic mass QTL 18		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	18	52539763	76104388	Rat
12904073	Kidm71	Kidney mass QTL 71		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	18	52539763	76104388	Rat
2301417	Bp319	Blood pressure QTL 319		0.002	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	52539763	76104388	Rat
1298072	Cia26	Collagen induced arthritis QTL 26	3.6		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	18	54709769	83828827	Rat
724542	Kidm2	Kidney mass QTL 2	2.6		kidney mass (VT:0002707)	calculated kidney weight (CMO:0000160)	18	59172115	83828827	Rat
2312600	Bp341	Blood pressure QTL 341		0.05	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59330409	70263868	Rat
2301969	Bp324	Blood pressure QTL 324	4.05		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	18	59712417	76477814	Rat
70185	BpQTLcluster15	Blood pressure QTL cluster 15	4.61		arterial blood pressure trait (VT:2000000)	absolute change in systolic blood pressure (CMO:0000607)	18	59712417	76477814	Rat
1331770	Bp234	Blood pressure QTL 234	3.807		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	71893566	Rat
6903353	Bp353	Blood pressure QTL 353	2.8		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	18	59796478	83828827	Rat
6903356	Bp354	Blood pressure QTL 354	4.6		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	18	59796478	83828827	Rat
61384	Bp48	Blood pressure QTL 48	19.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	18	60622311	77209844	Rat
631675	Iddm15	Insulin dependent diabetes mellitus QTL 15			urine glucose amount (VT:0001758)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	18	60622311	77209844	Rat

Markers in Region

RH130297

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,512,921 - 67,513,120 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	69,894,807 - 69,895,005	NCBI	Rnor6.0
Rnor_5.0	18	69,038,551 - 69,038,749	UniSTS	Rnor5.0
RGSC_v3.4	18	70,706,460 - 70,706,658	UniSTS	RGSC3.4
Celera	18	65,696,267 - 65,696,465	UniSTS
RH 3.4 Map	18	686.8	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

BF387492

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,555,397 - 67,555,559 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	69,937,459 - 69,937,620	NCBI	Rnor6.0
Rnor_5.0	18	69,081,203 - 69,081,364	UniSTS	Rnor5.0
RGSC_v3.4	18	70,748,930 - 70,749,091	UniSTS	RGSC3.4
Celera	18	65,738,737 - 65,738,898	UniSTS
RH 3.4 Map	18	675.6	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

BF405832

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,555,512 - 67,555,689 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	69,937,574 - 69,937,750	NCBI	Rnor6.0
Rnor_5.0	18	69,081,318 - 69,081,494	UniSTS	Rnor5.0
RGSC_v3.4	18	70,749,045 - 70,749,221	UniSTS	RGSC3.4
Celera	18	65,738,852 - 65,739,028	UniSTS
RH 3.4 Map	18	683.8	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

BF387441

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	18	67,515,043 - 67,515,226 (+)	MAPPER	mRatBN7.2
Rnor_6.0	18	69,896,929 - 69,897,111	NCBI	Rnor6.0
Rnor_5.0	18	69,040,673 - 69,040,855	UniSTS	Rnor5.0
RGSC_v3.4	18	70,708,582 - 70,708,764	UniSTS	RGSC3.4
Celera	18	65,698,389 - 65,698,571	UniSTS
RH 3.4 Map	18	681.0	UniSTS
Cytogenetic Map	18	q12.2	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium									68	11
Low	2	4	12	4	8	4	2	2	6	24	30		2
Below cutoff	1	35	24	16	11	16	6	9			11	9	6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_019319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772166	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039097051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z21935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000047271 ⟹ ENSRNOP00000050164

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,512,807 - 67,661,842 (-)	Ensembl
Rnor_6.0 Ensembl	18	69,894,684 - 69,944,632 (-)	Ensembl

RefSeq Acc Id:

ENSRNOT00000098156 ⟹ ENSRNOP00000083194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	18	67,515,337 - 67,661,842 (-)	Ensembl

RefSeq Acc Id:

NM_019319 ⟹ NP_062192

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,060 - 69,836,838 (-)	NCBI
mRatBN7.2	18	67,512,807 - 67,561,589 (-)	NCBI
Rnor_6.0	18	69,894,692 - 69,943,650 (-)	NCBI
Rnor_5.0	18	69,038,436 - 69,087,394 (-)	NCBI
Celera	18	65,696,152 - 65,744,928 (-)	NCBI

Sequence:

show sequence

ATGGCAGAGAAAGGTGACTGCATCGCCAGTGTCTACGGGTACGACCTTGGTGGGCGCTTCACTG
ACTTCCAACCCCTCGGCTTCGGGGTCAACGGGCTGGTGCTGTCGGCTACGGACAGCAGGGCTTG
CCGGAAGGTAGCCGTGAAGAAGATTGTGCTGAGTGACGCACGAAGCATGAAGCACGCGCTCCGA
GAGATCAAAATCATCCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTACTGGGAC
CCAAGGGTAGCGATCTGCAGGGCGAGCTCTTTAAGTTCAGCGTGGCTTATATTGTCCAAGAGTA
CATGGAGACTGACCTGGCATGCCTGCTAGAGCAGGGCACGCTGACCGAGGAGCACGCTAAGCTA
TTCATGTACCAGCTGCTGCGTGGGCTCAAGTACATCCACTCTGCCAACGTGTTGCACAGGGACC
TGAAGCCCGCCAACATTTTCATCAGCACGGAGGACCTCGTGCTGAAGATCGGGGATTTCGGGCT
GGCCAGAATCGCGGACCAGCATTACTCCCACAAGGGTTATCTGTCGGAAGGGTTGGTGACAAAG
TGGTACCGCTCTCCACGACTGCTCCTGTCCCCGAACAACTACACGAAAGCCATCGATATGTGGG
CAGCTGGCTGCATCCTAGCGGAGATGCTCACGGGGAAAATGCTCTTTGCTGGGGCTCACGAGCT
TGAGCAGATGCAGCTCATCCTAGACACCATCCCTGTAGTGCGGGAGGAAGACAAGGAGGAGCTG
CTCAGGGTGATGCCGTCCTTTGTCAGCAGCACTTGGGAGGTGAAGAGGCCACTGCGTAAGCTAC
TCCCGGATGTCAACCGTGAAGCCATTGACTTTCTGGAGAAGATCCTGACCTTTAACCCCATGGA
CCGCCTAACAGCTGAGATGGGGCTACAGCATCCTTACATGAGCCCGTATTCGTGCCCCGAGGAT
GAGCCCACCTCACAACACCCCTTCCGCATTGAAGACGAGATCGACGACCTCGTACTGATGGCTG
CCAGTCAGAGCCAGCTCTCCAACTGGGACAGGTATCCCGTGAGCCTGTCGTCAGATCTGGAATG
GCGGCCTGACCGCTGTCAGGACGCGAGCGAGGTGCAGCGCGACCCACGTGCTGGCTCTACTCCG
CTGGCGGAGGATGTTCAGGTGGACCCACGCAAGGACTCACAGAGCAGCTCCGAGCGCTTCCTGG
AGCAGTCGCACTCGTCCATGGAGCGCGCCTTTGAGGCCGACTATGGACGGTCCTGCGACTACAA
AGTGGGGTCTCCGTCCTACCTGGACAAGCTGCTGTGGCGCGACAACAAGCCCCACCACTACTCG
GAACCCAAGCTCATCCTGGACCTGTCGCACTGGAAGCAGGCGGCCAGCGCACCCCCCAGGGCTG
CAGTAGCAGCAGACCCAGTGTCACGTGAGGATGAGCCAGCAAGCCTCTTTCTGGAGATCGCGCA
GTGGGTCAAGAGCACACAAGGTGGCCCTGAGCGTGCCAGTCCTCCCCCTGATGCCCCAGAGCCC
CGTCTCTCTGCTTCACCCCCGGGACACCCAACACCCATTGATGGGGGTGCCAGTCCCCAATTCG
ACTTAGATGTGTTCATCTCGCGTGCCCTAAAGCTCTGCACCAAACCTGAGGACCTACCGGAAAA
CAAACTGGGCGACCTGAATGGTGCGTGCATCTCCGAGCACCCCGGCGACCTCGTGCAAACAGAG
GCCTTCTCCAAAGAAAGGTGGTGAGCACAGAAGGGGTGCGTGAGAACTCCCGGAGCAAGACCCC
ACCCAGAAAGCTGGACCGCTTCCTTGCTTTCCTAGTACTCCTTCAGCCCCTCTCTGCTGCATTG
GGGTTAGCAGAACACACGCGGGTCCGGGGAGCAAGAGGAATGTCCATTTCTTAAACTGCCTTAA
TAACTAGCCTTTAACCTCTGGGAGCGGGTTTGAGCAGACCCTGGCTGGGAGCTATCAGTTTCCC
ATCAAAGGGAAAGGCCTGTTGAGTGTACAAGGGAAGAAAGGGATTTCAGACCGAAGTCTACAGC
CCTACGAGGAGTCAGAAACAGCTTACAGACATAGTTTCCAAGCCGTGTGACCCACCTAGTCCCA
AATTGACATTTGGGCCCAGTGAAGCCATTAGGACCACAAGCCTGGTGGTGTCAGGATAAAGCCT
GTGTCCCAAGCTCCTATCCCTGGACCAGTGTCTGACCACAGTATAATGTCTTCCTCTGCTGGGG
CCACTCTGACTTTTTGGTCAGAAAACGGTCCCGAGTGCTTCTCGCTTTCCCTTACTGTCTGTCC
CATCCTTCCCTTTAATTTAGACCTGTGGCTCCTGTTTTCCGAAACCGGAAACAGAACCGGTTTC
TTTTTCCTAGTCGCCAGACATATTTCTACGACTCCCCAAGTGCTTAAATGTCCTCACCTGCCAC
CTCCCTGTATTAACCCAACCCAGCTCAGTCTGAAGTTACTCCTTCCTAGCAGAACAGTTTGGGG
GCTGCTTAAACTTAGTCATCTCCCAGGCCTGTGCCTACAGCCTCCTCCTGCACGCCCTATGCAC
TTTCCTGACTCAACACAGCCATTGTTCTCCAGTGGAGATCCTACAGGGATGAGTTTAAAGACGG
AAATTGCGAGAATCCCTCTTGTCTAATCCCCAGCATCCCACCCACCCCACCCACACACACACAG
CTCCTCTCCAAGACGATTTCAGGACCAAATGTTCTTGGCACAAATGGCTCATTTGTAGGAGAAG
CAATAAGGTGCTTTCCATAAAAACAAATGAGTTAGGAGGGAAGACTCCGCAGAACACCCATCAT
CCTTCATTAATGTCGCCCAGGATCATTTTAGTCCTAGCCAGGAGTAGACCCTAAAGGGATGGCC
TGAGAGATAGCAACCTTCGGGCAAGAGACCCAGAAAGATAAACCAGGAGTTTAAAGAAAGGTCC
TAACCTCGGGTGTCCTCAAGAGCCAGCTATCAAGGTGGAGAACCCGAGGCAAAGAAAGGGATTC
AAAGTAATCGCATCCTGGTGGCTCAGGTTAAGAGAAACTTGGAATCAGTTCCAAGCCTCTGCAG
GAAAAGCATGGGGCAGGGGGTTGAGGGGAATACCAACAGTCCCTGGTCTGTTCCTGAACACTCC
GCCACTGGTATCTATCCTCCCCTCCCCCTGCCGACATCCCAAAGATACCCACGAGAGGTCCAGC
TGCTCTGTTGAGAGATCTCCTTGGGCTGTGTTCATTCTCACGACGCAGCACCTTAAATCTCGCT
GACTGTGGTTTGTACATTGAAACGTACAGTGCATCAGAAACATATATTTTAAAACAATCATGCT
GACCGGGTTTTTAAGTGGAAAGTATGTAAATATAAAGGGTTTAGGTTTTATTCCTTTTTTTTTT
CTTTAAGAAAAAAATGCAATGCACACCACCCCTTATGTGCCATTTGTCGTCGGGGGGAAGCTTT
ACTTTTTGAGTAAAGGGACATGCTGCTGACTGACCGCTAGCTCACGGAGAATTGTGATAATTAG
TCATGTTCTTAAAAGAATCTGTTAAATATTATTAAACTTGATCAGGATGAGCCAAATAAAGTTT
TATTGGAACATA

hide sequence

RefSeq Acc Id:

XM_008772166 ⟹ XP_008770388

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,935,902 (-)	NCBI
mRatBN7.2	18	67,512,805 - 67,660,651 (-)	NCBI
Rnor_6.0	18	69,894,692 - 70,043,484 (-)	NCBI

Sequence:

show sequence

CCGAGCCCGAGCCGGACTGTCGGGGAGCCGGCGGGAGCTCGGCCGCGCCAGGGCTGGTGCAACC
GGGCGGAGAGCGCCGGCGCCGCGGCCGCAGACAAAGGGCCGCCGCGCTCCGTCTGCCTCGGGAA
GGGGACTGTCTGAAAGATGCTGCATCCCCGAGGCCCTACTGCGTCTGGCCGAGCATTCTCTGTC
AAGGTGCTGCGGATACGTGGGTGAAGAGGATGTCCTCTCCTCCAAAGCCTCTGGAAGGTCCTGG
CCTGGCAGCTGAGTTCTTTTTGGACTTGGGACAGCAACTGTAACTGCAGAGCTCGTGAGAGTGT
GGCTTTGCCCAGCTCTTTTCTCACCAGACTGGTTGGGGTTTTGGAATCTAAAAGAAACTTGTAG
GAAGATAAACTGGAAAGAAATGAAAAGAAGCCCCTAGAACCGTCTAGAATCCATTACCTGTATC
CCCTCTTACTGCTCGCAGCACAGAGGGAGGCTGTGATCCGATTAAGCTTTGGACCCACTTAAGC
CAAAGCAGCCACAGCTCAGAAAGCAGCGCCTGCACTTGAGCCCACACAGAAGGATTCAAAGTTG
CCGCATACTTTACTGTGAGATCCATGGAGATACAAGATAATGATTCGGGCTTCTCCTCCTAATA
ATGCCAGATCTAGAAGAAGCATGAACCACTTTAAGCATCTAGGAGGGCTCTTGAAGCACAGGAG
TCGGTGGCAAACCCTCCCAGTGCAGGTAAGAACCTTTGCAGCGTCCAGCTGAGCAGGTCGGTGA
GCAAGGGCTTGCAGCCCTTCCTGTCCCAGAGAGTTGACAGCAGTGACCTCACCAGGAGCCAAAG
CATCCCTCAGTTGTGAGATCTGACAGAATGAGGTGTGCTGGGGAAGCCACTAGCTGGAACTTGG
CCTTTCCCAACTGCCCCTGCATTTTACAGCCAGCCCCAGACCACTGAGGCAGCAATGGCAGAGA
AAGGTGACTGCATCGCCAGTGTCTACGGGTACGACCTTGGTGGGCGCTTCACTGACTTCCAACC
CCTCGGCTTCGGGGTCAACGGGCTGGTGCTGTCGGCTACGGACAGCAGGGCTTGCCGGAAGGTA
GCCGTGAAGAAGATTGTGCTGAGTGACGCACGAAGCATGAAGCACGCGCTCCGAGAGATCAAAA
TCATCCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTACTGGGACCCAAGGGTAG
CGATCTGCAGGGCGAGCTCTTTAAGTTCAGCGTGGCTTATATTGTCCAAGAGTACATGGAGACT
GACCTGGCATGCCTGCTAGAGCAGGGCACGCTGACCGAGGAGCACGCTAAGCTATTCATGTACC
AGCTGCTGCGTGGGCTCAAGTACATCCACTCTGCCAACGTGTTGCACAGGGACCTGAAGCCCGC
CAACATTTTCATCAGCACGGAGGACCTCGTGCTGAAGATCGGGGATTTCGGGCTGGCCAGAATC
GCGGACCAGCATTACTCCCACAAGGGTTATCTGTCGGAAGGGTTGGTGACAAAGTGGTACCGCT
CTCCACGACTGCTCCTGTCCCCGAACAACTACACGAAAGCCATCGATATGTGGGCAGCTGGCTG
CATCCTAGCGGAGATGCTCACGGGGAAAATGCTCTTTGCTGGGGCTCACGAGCTTGAGCAGATG
CAGCTCATCCTAGACACCATCCCTGTAGTGCGGGAGGAAGACAAGGAGGAGCTGCTCAGGGTGA
TGCCGTCCTTTGTCAGCAGCACTTGGGAGGTGAAGAGGCCACTGCGTAAGCTACTCCCGGATGT
CAACCGTGAAGCCATTGACTTTCTGGAGAAGATCCTGACCTTTAACCCCATGGACCGCCTAACA
GCTGAGATGGGGCTACAGCATCCTTACATGAGCCCGTATTCGTGCCCCGAGGATGAGCCCACCT
CACAACACCCCTTCCGCATTGAAGACGAGATCGACGACCTCGTACTGATGGCTGCCAGTCAGAG
CCAGCTCTCCAACTGGGACAGGTATCCCGTGAGCCTGTCGTCAGATCTGGAATGGCGGCCTGAC
CGCTGTCAGGACGCGAGCGAGGTGCAGCGCGACCCACGTGCTGGCTCTACTCCGCTGGCGGAGG
ATGTTCAGGTGGACCCACGCAAGGACTCACAGAGCAGCTCCGAGCGCTTCCTGGAGCAGTCGCA
CTCGTCCATGGAGCGCGCCTTTGAGGCCGACTATGGACGGTCCTGCGACTACAAAGTGGGGTCT
CCGTCCTACCTGGACAAGCTGCTGTGGCGCGACAACAAGCCCCACCACTACTCGGAACCCAAGC
TCATCCTGGACCTGTCGCACTGGAAGCAGGCGGCCAGCGCACCCCCCAGGGCTGCAGTAGCAGC
AGACCCAGTGTCACGTGAGGATGAGCCAGCAAGCCTCTTTCTGGAGATCGCGCAGTGGGTCAAG
AGCACACAAGGTGGCCCTGAGCGTGCCAGTCCTCCCCCTGATGCCCCAGAGCCCCGTCTCTCTG
CTTCACCCCCGGGACACCCAACACCCATTGATGGGGGTGCCAGTCCCCAATTCGACTTAGATGT
GTTCATCTCGCGTGCCCTAAAGCTCTGCACCAAACCTGAGGACCTACCGGAAAACAAACTGGGC
GACCTGAATGGTGCGTGCATCTCCGAGCACCCCGGCGACCTCGTGCAAACAGAGGCCTTCTCCA
AAGAAAGGTGGTGAGCACAGAAGGGGTGCGTGAGAACTCCCGGAGCAAGACCCCACCCAGAAAG
CTGGACCGCTTCCTTGCTTTCCTAGTACTCCTTCAGCCCCTCTCTGCTGCATTGGGGTTAGCAG
AACACACGCGGGTCCGGGGAGCAAGAGGAATGTCCATTTCTTAAACTGCCTTAATAACTAGCCT
TTAACCTCTGGGAGCGGGTTTGAGCAGACCCTGGCTGGGAGCTATCAGTTTCCCATCAAAGGGA
AAGGCCTGTTGAGTGTACAAGGGAAGAAAGGGATTTCAGACCGAAGTCTACAGCCCTACGAGGA
GTCAGAAACAGCTTACAGACATAGTTTCCAAGCCGTGTGACCCACCTAGTCCCAAATTGACATT
TGGGCCCAGTGAAGCCATTAGGACCACAAGCCTGGTGGTGTCAGGATAAAGCCTGTGTCCCAAG
CTCCTATCCCTGGACCAGTGTCTGACCACAGTATAATGTCTTCCTCTGCTGGGGCCACTCTGAC
TTTTTGGTCAGAAAACGGTCCCGAGTGCTTCTCGCTTTCCCTTACTGTCTGTCCCATCCTTCCC
TTTAATTTAGACCTGTGGCTCCTGTTTTCCGAAACCGGAAACAGAACCGGTTTCTTTTTCCTAG
TCGCCAGACATATTTCTACGACTCCCCAAGTGCTTAAATGTCCTCACCTGCCACCTCCCTGTAT
TAACCCAACCCAGCTCAGTCTGAAGTTACTCCTTCCTAGCAGAACAGTTTGGGGGCTGCTTAAA
CTTAGTCATCTCCCAGGCCTGTGCCTACAGCCTCCTCCTGCACGCCCTATGCACTTTCCTGACT
CAACACAGCCATTGTTCTCCAGTGGAGATCCTACAGGGATGAGTTTAAAGACGGAAATTGCGAG
AATCCCTCTTGTCTAATCCCCAGCATCCCACCCACCCCACCCACACACACACAGCTCCTCTCCA
AGACGATTTCAGGACCAAATGTTCTTGGCACAAATGGCTCATTTGTAGGAGAAGCAATAAGGTG
CTTTCCATAAAAACAAATGAGTTAGGAGGGAAGACTCCGCAGAACACCCATCATCCTTCATTAA
TGTCGCCCAGGATCATTTTAGTCCTAGCCAGGAGTAGACCCTAAAGGGATGGCCTGAGAGATAG
CAACCTTCGGGCAAGAGACCCAGAAAGATAAACCAGGAGTTTAAAGAAAGGTCCTAACCTCGGG
TGTCCTCAAGAGCCAGCTATCAAGGTGGAGAACCCGAGGCAAAGAAAGGGATTCAAAGTAATCG
CATCCTGGTGGCTCAGGTTAAGAGAAACTTGGAATCAGTTCCAAGCCTCTGCAGGAAAAGCATG
GGGCAGGGGGTTGAGGGGAATACCAACAGTCCCTGGTCTGTTCCTGAACACTCCGCCACTGGTA
TCTATCCTCCCCTCCCCCTGCCGACATCCCAAAGATACCCACGAGAGGTCCAGCTGCTCTGTTG
AGAGATCTCCTTGGGCTGTGTTCATTCTCACGACGCAGCACCTTAAATCTCGCTGACTGTGGTT
TGTACATTGAAACGTACAGTGCATCAGAAACATATATTTTAAAACAATCATGCTGACCGGGTTT
TTAAGTGGAAAGTATGTAAATATAAAGGGTTTAGGTTTTATTCCTTTTTTTTTTCTTTAAGAAA
AAAATGCAATGCACACCACCCCTTATGTGCCATTTGTCGTCGGGGGGAAGCTTTACTTTTTGAG
TAAAGGGACATGCTGCTGACTGACCGCTAGCTCACGGAGAATTGTGATAATTAGTCATGTTCTT
AAAAGAATCTGTTAAATATTATTAAACTTGATCAGGATGAGCCAAATAAAGTTTTATTGGAACA
TA

hide sequence

RefSeq Acc Id:

XM_008772167 ⟹ XP_008770389

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,937,524 (-)	NCBI
mRatBN7.2	18	67,512,805 - 67,661,271 (-)	NCBI
Rnor_6.0	18	69,894,692 - 70,043,634 (-)	NCBI

Sequence:

show sequence

CCTCCCGGTCCGGGTCCCAGCTGGATGGTCCCGGGTGCGGTTGCCCGGGCTCCAGCTGTCCCCG
CCGCAGCAGGGAAGGGGACTGTCTGAAAGATGCTGCATCCCCGAGGCCCTACTGCGTCTGGCCG
AGCATTCTCTGTCAAGGTGCTGCGGATACGTGGGTGAAGAGGATGTCCTCTCCTCCAAAGCCTC
TGGAAGGTCCTGGCCTGGCAGCTGAGTTCTTTTTGGACTTGGGACAGCAACTGTAACTGCAGAG
CTCGTGAGAGTGTGGCTTTGCCCAGCTCTTTTCTCACCAGACTGGTTGGGGTTTTGGAATCTAA
AAGAAACTTGTAGGAAGATAAACTGGAAAGAAATGAAAAGAAGCCCCTAGAACCGTCTAGAATC
CATTACCTGTATCCCCTCTTACTGCTCGCAGCACAGAGGGAGGCTGTGATCCGATTAAGCTTTG
GACCCACTTAAGCCAAAGCAGCCACAGCTCAGAAAGCAGCGCCTGCACTTGAGCCCACACAGAA
GGATTCAAAGTTGCCGCATACTTTACTGTGAGATCCATGGAGATACAAGATAATGATTCGGGCT
TCTCCTCCTAATAATGCCAGATCTAGAAGAAGCATGAACCACTTTAAGCATCTAGGAGGGCTCT
TGAAGCACAGGAGTCGGTGGCAAACCCTCCCAGTGCAGGTAAGAACCTTTGCAGCGTCCAGCTG
AGCAGGTCGGTGAGCAAGGGCTTGCAGCCCTTCCTGTCCCAGAGAGTTGACAGCAGTGACCTCA
CCAGGAGCCAAAGCATCCCTCAGTTGTGAGATCTGACAGAATGAGGTGTGCTGGGGAAGCCACT
AGCTGGAACTTGGCCTTTCCCAACTGCCCCTGCATTTTACAGCCAGCCCCAGACCACTGAGGCA
GCAATGGCAGAGAAAGGTGACTGCATCGCCAGTGTCTACGGGTACGACCTTGGTGGGCGCTTCA
CTGACTTCCAACCCCTCGGCTTCGGGGTCAACGGGCTGGTGCTGTCGGCTACGGACAGCAGGGC
TTGCCGGAAGGTAGCCGTGAAGAAGATTGTGCTGAGTGACGCACGAAGCATGAAGCACGCGCTC
CGAGAGATCAAAATCATCCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTACTGG
GACCCAAGGGTAGCGATCTGCAGGGCGAGCTCTTTAAGTTCAGCGTGGCTTATATTGTCCAAGA
GTACATGGAGACTGACCTGGCATGCCTGCTAGAGCAGGGCACGCTGACCGAGGAGCACGCTAAG
CTATTCATGTACCAGCTGCTGCGTGGGCTCAAGTACATCCACTCTGCCAACGTGTTGCACAGGG
ACCTGAAGCCCGCCAACATTTTCATCAGCACGGAGGACCTCGTGCTGAAGATCGGGGATTTCGG
GCTGGCCAGAATCGCGGACCAGCATTACTCCCACAAGGGTTATCTGTCGGAAGGGTTGGTGACA
AAGTGGTACCGCTCTCCACGACTGCTCCTGTCCCCGAACAACTACACGAAAGCCATCGATATGT
GGGCAGCTGGCTGCATCCTAGCGGAGATGCTCACGGGGAAAATGCTCTTTGCTGGGGCTCACGA
GCTTGAGCAGATGCAGCTCATCCTAGACACCATCCCTGTAGTGCGGGAGGAAGACAAGGAGGAG
CTGCTCAGGGTGATGCCGTCCTTTGTCAGCAGCACTTGGGAGGTGAAGAGGCCACTGCGTAAGC
TACTCCCGGATGTCAACCGTGAAGCCATTGACTTTCTGGAGAAGATCCTGACCTTTAACCCCAT
GGACCGCCTAACAGCTGAGATGGGGCTACAGCATCCTTACATGAGCCCGTATTCGTGCCCCGAG
GATGAGCCCACCTCACAACACCCCTTCCGCATTGAAGACGAGATCGACGACCTCGTACTGATGG
CTGCCAGTCAGAGCCAGCTCTCCAACTGGGACAGGTATCCCGTGAGCCTGTCGTCAGATCTGGA
ATGGCGGCCTGACCGCTGTCAGGACGCGAGCGAGGTGCAGCGCGACCCACGTGCTGGCTCTACT
CCGCTGGCGGAGGATGTTCAGGTGGACCCACGCAAGGACTCACAGAGCAGCTCCGAGCGCTTCC
TGGAGCAGTCGCACTCGTCCATGGAGCGCGCCTTTGAGGCCGACTATGGACGGTCCTGCGACTA
CAAAGTGGGGTCTCCGTCCTACCTGGACAAGCTGCTGTGGCGCGACAACAAGCCCCACCACTAC
TCGGAACCCAAGCTCATCCTGGACCTGTCGCACTGGAAGCAGGCGGCCAGCGCACCCCCCAGGG
CTGCAGTAGCAGCAGACCCAGTGTCACGTGAGGATGAGCCAGCAAGCCTCTTTCTGGAGATCGC
GCAGTGGGTCAAGAGCACACAAGGTGGCCCTGAGCGTGCCAGTCCTCCCCCTGATGCCCCAGAG
CCCCGTCTCTCTGCTTCACCCCCGGGACACCCAACACCCATTGATGGGGGTGCCAGTCCCCAAT
TCGACTTAGATGTGTTCATCTCGCGTGCCCTAAAGCTCTGCACCAAACCTGAGGACCTACCGGA
AAACAAACTGGGCGACCTGAATGGTGCGTGCATCTCCGAGCACCCCGGCGACCTCGTGCAAACA
GAGGCCTTCTCCAAAGAAAGGTGGTGAGCACAGAAGGGGTGCGTGAGAACTCCCGGAGCAAGAC
CCCACCCAGAAAGCTGGACCGCTTCCTTGCTTTCCTAGTACTCCTTCAGCCCCTCTCTGCTGCA
TTGGGGTTAGCAGAACACACGCGGGTCCGGGGAGCAAGAGGAATGTCCATTTCTTAAACTGCCT
TAATAACTAGCCTTTAACCTCTGGGAGCGGGTTTGAGCAGACCCTGGCTGGGAGCTATCAGTTT
CCCATCAAAGGGAAAGGCCTGTTGAGTGTACAAGGGAAGAAAGGGATTTCAGACCGAAGTCTAC
AGCCCTACGAGGAGTCAGAAACAGCTTACAGACATAGTTTCCAAGCCGTGTGACCCACCTAGTC
CCAAATTGACATTTGGGCCCAGTGAAGCCATTAGGACCACAAGCCTGGTGGTGTCAGGATAAAG
CCTGTGTCCCAAGCTCCTATCCCTGGACCAGTGTCTGACCACAGTATAATGTCTTCCTCTGCTG
GGGCCACTCTGACTTTTTGGTCAGAAAACGGTCCCGAGTGCTTCTCGCTTTCCCTTACTGTCTG
TCCCATCCTTCCCTTTAATTTAGACCTGTGGCTCCTGTTTTCCGAAACCGGAAACAGAACCGGT
TTCTTTTTCCTAGTCGCCAGACATATTTCTACGACTCCCCAAGTGCTTAAATGTCCTCACCTGC
CACCTCCCTGTATTAACCCAACCCAGCTCAGTCTGAAGTTACTCCTTCCTAGCAGAACAGTTTG
GGGGCTGCTTAAACTTAGTCATCTCCCAGGCCTGTGCCTACAGCCTCCTCCTGCACGCCCTATG
CACTTTCCTGACTCAACACAGCCATTGTTCTCCAGTGGAGATCCTACAGGGATGAGTTTAAAGA
CGGAAATTGCGAGAATCCCTCTTGTCTAATCCCCAGCATCCCACCCACCCCACCCACACACACA
CAGCTCCTCTCCAAGACGATTTCAGGACCAAATGTTCTTGGCACAAATGGCTCATTTGTAGGAG
AAGCAATAAGGTGCTTTCCATAAAAACAAATGAGTTAGGAGGGAAGACTCCGCAGAACACCCAT
CATCCTTCATTAATGTCGCCCAGGATCATTTTAGTCCTAGCCAGGAGTAGACCCTAAAGGGATG
GCCTGAGAGATAGCAACCTTCGGGCAAGAGACCCAGAAAGATAAACCAGGAGTTTAAAGAAAGG
TCCTAACCTCGGGTGTCCTCAAGAGCCAGCTATCAAGGTGGAGAACCCGAGGCAAAGAAAGGGA
TTCAAAGTAATCGCATCCTGGTGGCTCAGGTTAAGAGAAACTTGGAATCAGTTCCAAGCCTCTG
CAGGAAAAGCATGGGGCAGGGGGTTGAGGGGAATACCAACAGTCCCTGGTCTGTTCCTGAACAC
TCCGCCACTGGTATCTATCCTCCCCTCCCCCTGCCGACATCCCAAAGATACCCACGAGAGGTCC
AGCTGCTCTGTTGAGAGATCTCCTTGGGCTGTGTTCATTCTCACGACGCAGCACCTTAAATCTC
GCTGACTGTGGTTTGTACATTGAAACGTACAGTGCATCAGAAACATATATTTTAAAACAATCAT
GCTGACCGGGTTTTTAAGTGGAAAGTATGTAAATATAAAGGGTTTAGGTTTTATTCCTTTTTTT
TTTCTTTAAGAAAAAAATGCAATGCACACCACCCCTTATGTGCCATTTGTCGTCGGGGGGAAGC
TTTACTTTTTGAGTAAAGGGACATGCTGCTGACTGACCGCTAGCTCACGGAGAATTGTGATAAT
TAGTCATGTTCTTAAAAGAATCTGTTAAATATTATTAAACTTGATCAGGATGAGCCAAATAAAG
TTTTATTGGAACATA

hide sequence

RefSeq Acc Id:

XM_017601014 ⟹ XP_017456503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,935,357 (-)	NCBI
mRatBN7.2	18	67,512,805 - 67,660,219 (-)	NCBI
Rnor_6.0	18	69,894,692 - 70,043,484 (-)	NCBI

Sequence:

show sequence

CCGAGCCCGAGCCGGACTGTCGGGGAGCCGGCGGGAGCTCGGCCGCGCCAGGGCTGGTGCAACC
GGGCGGAGAGCGCCGGCGCCGCGGCCGCAGACAAAGGGCCGCCGCGCTCCGTCTGCCTCGGTGA
GTGGCTCCCTGCTCGCCCGCTTTTTTCTCTAGCTGCCCGCTCCTCCCGGAGTTCCGCCGGCTCC
GGGGAGCTGGGAACTGCAAGGACCGGGACTTCCCGGTTCACTCTGCACCCCAGCCTCACCTGAC
CCGTGATTCCGTCCCCCCGCCCCCCAAGCTCGAGCAGACACCCAACTCGCGACTTTCGGAGCGC
CGGCCACTGTCTCCGGTGGGACCCACCCCGGCCGCCCTCGGTGACCTCTTCCTCCGCGCACCGT
GCGCGGGTACTGTCCCTGGCTCCCCAGTTTGGTTGGGAAGGTTGCTGCTGAGCTCTTCCGTGGG
TGTGTGCTAGGGAAGACGACCAAGGGGCTGGGCTCCACGAGGGGACCCCACCCCTTGGGGACAG
CGCGCGTTCGGGGTGGCGGAGGGGCGGTTCTCGAGTTCAGATTTGGATTTGGGGGTCTGGTTCT
GTTCCCTGTTAGCCTCTCCTCCAGTTTATTTCTCTGTTCAAGGGTTAGCCTCGCGTTTTGTCCC
GGCCGCACCCGAAAGAGGCGCCTCTTCTGTGGGTCGGTGGCCCTGGGAGGGAGAGGACCTAGCT
GTTTCCCCTCGCTGGACTGCACTGAGCCCGCAACGGTTGGGGAGGGAGGGCAGTGCGGGCAGCG
ACTGGGGGCTGACATCACTGCTCAGTCCCGACCGGCTCCCTCTGCCTCCGGCCGGCTTGATCTC
CATCAGAAAAGAATCGGAAGCCCAGCGGGCTTTTGCTTTTGTTCTCCCTGCTACTCTCGATTCC
TTTGAGAAACCCGGATGGTTGGTTACCCAAAGAGGGGGTTGTGGTGAGAGTTCCAGGTGCTACC
CTGAAGGGACAATCACTGGAAGAGGCTCTTTCTAGCCCCAAGATTTCGCCCATCAATACCCCGG
AGCGGAGGGAAGGGGACTGTCTGAAAGATGCTGCATCCCCGAGGCCCTACTGCGTCTGGCCGAG
CATTCTCTGTCAAGGTGCTGCGGATACGTGGGTGAAGAGGATGTCCTCTCCTCCAAAGCCTCTG
GAAGGTCCTGGCCTGGCAGCTGAGTTCTTTTTGGACTTGGGACAGCAACTGTAACTGCAGAGCT
CGTGAGAGTGTGGCTTTGCCCAGCTCTTTTCTCACCAGACTGGTTGGGGTTTTGGAATCTAAAA
GAAACTTGTAGGAAGATAAACTGGAAAGAAATGAAAAGAAGCCCCTAGAACCGTCTAGAATCCA
TTACCTGTATCCCCTCTTACTGCTCGCAGCACAGAGGGAGGCTGTGATCCGATTAAGCTTTGGA
CCCACTTAAGCCAAAGCAGCCACAGCTCAGAAAGCAGCGCCTGCACTTGAGCCCACACAGAAGG
ATTCAAAGTTGCCGCATACTTTACTGTGAGATCCATGGAGATACAAGATAATGATTCGGGCTTC
TCCTCCTAATAATGCCAGATCTAGAAGAAGCATGAACCACTTTAAGCATCTAGGAGGGCTCTTG
AAGCACAGGAGTCGGTGGCAAACCCTCCCAGTGCAGGTAAGAACCTTTGCAGCGTCCAGCTGAG
CAGGTCGGTGAGCAAGGGCTTGCAGCCCTTCCTGTCCCAGAGAGTTGACAGCAGTGACCTCACC
AGGAGCCAAAGCATCCCTCAGTTGTGAGATCTGACAGAATGAGGTGTGCTGGGGAAGCCACTAG
CTGGAACTTGGCCTTTCCCAACTGCCCCTGCATTTTACAGCCAGCCCCAGACCACTGAGGCAGC
AATGGCAGAGAAAGGTGACTGCATCGCCAGTGTCTACGGGTACGACCTTGGTGGGCGCTTCACT
GACTTCCAACCCCTCGGCTTCGGGGTCAACGGGCTGGTGCTGTCGGCTACGGACAGCAGGGCTT
GCCGGAAGGTAGCCGTGAAGAAGATTGTGCTGAGTGACGCACGAAGCATGAAGCACGCGCTCCG
AGAGATCAAAATCATCCGGCGCCTGGACCACGACAACATCGTCAAAGTGTACGAGGTACTGGGA
CCCAAGGGTAGCGATCTGCAGGGCGAGCTCTTTAAGTTCAGCGTGGCTTATATTGTCCAAGAGT
ACATGGAGACTGACCTGGCATGCCTGCTAGAGCAGGGCACGCTGACCGAGGAGCACGCTAAGCT
ATTCATGTACCAGCTGCTGCGTGGGCTCAAGTACATCCACTCTGCCAACGTGTTGCACAGGGAC
CTGAAGCCCGCCAACATTTTCATCAGCACGGAGGACCTCGTGCTGAAGATCGGGGATTTCGGGC
TGGCCAGAATCGCGGACCAGCATTACTCCCACAAGGGTTATCTGTCGGAAGGGTTGGTGACAAA
GTGGTACCGCTCTCCACGACTGCTCCTGTCCCCGAACAACTACACGAAAGCCATCGATATGTGG
GCAGCTGGCTGCATCCTAGCGGAGATGCTCACGGGGAAAATGCTCTTTGCTGGGGCTCACGAGC
TTGAGCAGATGCAGCTCATCCTAGACACCATCCCTGTAGTGCGGGAGGAAGACAAGGAGGAGCT
GCTCAGGGTGATGCCGTCCTTTGTCAGCAGCACTTGGGAGGTGAAGAGGCCACTGCGTAAGCTA
CTCCCGGATGTCAACCGTGAAGCCATTGACTTTCTGGAGAAGATCCTGACCTTTAACCCCATGG
ACCGCCTAACAGCTGAGATGGGGCTACAGCATCCTTACATGAGCCCGTATTCGTGCCCCGAGGA
TGAGCCCACCTCACAACACCCCTTCCGCATTGAAGACGAGATCGACGACCTCGTACTGATGGCT
GCCAGTCAGAGCCAGCTCTCCAACTGGGACAGGTATCCCGTGAGCCTGTCGTCAGATCTGGAAT
GGCGGCCTGACCGCTGTCAGGACGCGAGCGAGGTGCAGCGCGACCCACGTGCTGGCTCTACTCC
GCTGGCGGAGGATGTTCAGGTGGACCCACGCAAGGACTCACAGAGCAGCTCCGAGCGCTTCCTG
GAGCAGTCGCACTCGTCCATGGAGCGCGCCTTTGAGGCCGACTATGGACGGTCCTGCGACTACA
AAGTGGGGTCTCCGTCCTACCTGGACAAGCTGCTGTGGCGCGACAACAAGCCCCACCACTACTC
GGAACCCAAGCTCATCCTGGACCTGTCGCACTGGAAGCAGGCGGCCAGCGCACCCCCCAGGGCT
GCAGTAGCAGCAGACCCAGTGTCACGTGAGGATGAGCCAGCAAGCCTCTTTCTGGAGATCGCGC
AGTGGGTCAAGAGCACACAAGGTGGCCCTGAGCGTGCCAGTCCTCCCCCTGATGCCCCAGAGCC
CCGTCTCTCTGCTTCACCCCCGGGACACCCAACACCCATTGATGGGGGTGCCAGTCCCCAATTC
GACTTAGATGTGTTCATCTCGCGTGCCCTAAAGCTCTGCACCAAACCTGAGGACCTACCGGAAA
ACAAACTGGGCGACCTGAATGGTGCGTGCATCTCCGAGCACCCCGGCGACCTCGTGCAAACAGA
GGCCTTCTCCAAAGAAAGGTGGTGAGCACAGAAGGGGTGCGTGAGAACTCCCGGAGCAAGACCC
CACCCAGAAAGCTGGACCGCTTCCTTGCTTTCCTAGTACTCCTTCAGCCCCTCTCTGCTGCATT
GGGGTTAGCAGAACACACGCGGGTCCGGGGAGCAAGAGGAATGTCCATTTCTTAAACTGCCTTA
ATAACTAGCCTTTAACCTCTGGGAGCGGGTTTGAGCAGACCCTGGCTGGGAGCTATCAGTTTCC
CATCAAAGGGAAAGGCCTGTTGAGTGTACAAGGGAAGAAAGGGATTTCAGACCGAAGTCTACAG
CCCTACGAGGAGTCAGAAACAGCTTACAGACATAGTTTCCAAGCCGTGTGACCCACCTAGTCCC
AAATTGACATTTGGGCCCAGTGAAGCCATTAGGACCACAAGCCTGGTGGTGTCAGGATAAAGCC
TGTGTCCCAAGCTCCTATCCCTGGACCAGTGTCTGACCACAGTATAATGTCTTCCTCTGCTGGG
GCCACTCTGACTTTTTGGTCAGAAAACGGTCCCGAGTGCTTCTCGCTTTCCCTTACTGTCTGTC
CCATCCTTCCCTTTAATTTAGACCTGTGGCTCCTGTTTTCCGAAACCGGAAACAGAACCGGTTT
CTTTTTCCTAGTCGCCAGACATATTTCTACGACTCCCCAAGTGCTTAAATGTCCTCACCTGCCA
CCTCCCTGTATTAACCCAACCCAGCTCAGTCTGAAGTTACTCCTTCCTAGCAGAACAGTTTGGG
GGCTGCTTAAACTTAGTCATCTCCCAGGCCTGTGCCTACAGCCTCCTCCTGCACGCCCTATGCA
CTTTCCTGACTCAACACAGCCATTGTTCTCCAGTGGAGATCCTACAGGGATGAGTTTAAAGACG
GAAATTGCGAGAATCCCTCTTGTCTAATCCCCAGCATCCCACCCACCCCACCCACACACACACA
GCTCCTCTCCAAGACGATTTCAGGACCAAATGTTCTTGGCACAAATGGCTCATTTGTAGGAGAA
GCAATAAGGTGCTTTCCATAAAAACAAATGAGTTAGGAGGGAAGACTCCGCAGAACACCCATCA
TCCTTCATTAATGTCGCCCAGGATCATTTTAGTCCTAGCCAGGAGTAGACCCTAAAGGGATGGC
CTGAGAGATAGCAACCTTCGGGCAAGAGACCCAGAAAGATAAACCAGGAGTTTAAAGAAAGGTC
CTAACCTCGGGTGTCCTCAAGAGCCAGCTATCAAGGTGGAGAACCCGAGGCAAAGAAAGGGATT
CAAAGTAATCGCATCCTGGTGGCTCAGGTTAAGAGAAACTTGGAATCAGTTCCAAGCCTCTGCA
GGAAAAGCATGGGGCAGGGGGTTGAGGGGAATACCAACAGTCCCTGGTCTGTTCCTGAACACTC
CGCCACTGGTATCTATCCTCCCCTCCCCCTGCCGACATCCCAAAGATACCCACGAGAGGTCCAG
CTGCTCTGTTGAGAGATCTCCTTGGGCTGTGTTCATTCTCACGACGCAGCACCTTAAATCTCGC
TGACTGTGGTTTGTACATTGAAACGTACAGTGCATCAGAAACATATATTTTAAAACAATCATGC
TGACCGGGTTTTTAAGTGGAAAGTATGTAAATATAAAGGGTTTAGGTTTTATTCCTTTTTTTTT
TCTTTAAGAAAAAAATGCAATGCACACCACCCCTTATGTGCCATTTGTCGTCGGGGGGAAGCTT
TACTTTTTGAGTAAAGGGACATGCTGCTGACTGACCGCTAGCTCACGGAGAATTGTGATAATTA
GTCATGTTCTTAAAAGAATCTGTTAAATATTATTAAACTTGATCAGGATGAGCCAAATAAAGTT
TTATTGGAACATA

hide sequence

RefSeq Acc Id:

XM_039097051 ⟹ XP_038952979

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,935,895 (-)	NCBI
mRatBN7.2	18	67,512,805 - 67,660,624 (-)	NCBI

RefSeq Acc Id:

XM_063277522 ⟹ XP_063133592

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,935,843 (-)	NCBI

RefSeq Acc Id:

XM_063277523 ⟹ XP_063133593

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,788,058 - 69,935,320 (-)	NCBI

RefSeq Acc Id:

XM_063277524 ⟹ XP_063133594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,790,458 - 69,935,320 (-)	NCBI

RefSeq Acc Id:

XM_063277525 ⟹ XP_063133595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	18	69,789,878 - 69,937,524 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_062192	(Get FASTA)	NCBI Sequence Viewer
	XP_008770388	(Get FASTA)	NCBI Sequence Viewer
	XP_008770389	(Get FASTA)	NCBI Sequence Viewer
	XP_017456503	(Get FASTA)	NCBI Sequence Viewer
	XP_038952979	(Get FASTA)	NCBI Sequence Viewer
	XP_063133592	(Get FASTA)	NCBI Sequence Viewer
	XP_063133593	(Get FASTA)	NCBI Sequence Viewer
	XP_063133594	(Get FASTA)	NCBI Sequence Viewer
	XP_063133595	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	CAA79929	(Get FASTA)	NCBI Sequence Viewer
	EDL82911	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000050164
	ENSRNOP00000050164.3
	ENSRNOP00000083194.1
GenBank Protein	Q63454	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_062192 ⟸ NM_019319

- UniProtKB:

G3V9J9 (UniProtKB/TrEMBL), A6KRD4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEKGDCIASVYGYDLGGRFTDFQPLGFGVNGLVLSATDSRACRKVAVKKIVLSDARSMKHALR
EIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL
FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIADQHYSHKGYLSEGLVTK
WYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEEL
LRVMPSFVSSTWEVKRPLRKLLPDVNREAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPED
EPTSQHPFRIEDEIDDLVLMAASQSQLSNWDRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSTP
LAEDVQVDPRKDSQSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYS
EPKLILDLSHWKQAASAPPRAAVAADPVSREDEPASLFLEIAQWVKSTQGGPERASPPPDAPEP
RLSASPPGHPTPIDGGASPQFDLDVFISRALKLCTKPEDLPENKLGDLNGACISEHPGDLVQTE
AFSKERW

hide sequence

RefSeq Acc Id:	XP_008770389 ⟸ XM_008772167
- Peptide Label:	isoform X1
- UniProtKB:	G3V9J9 (UniProtKB/TrEMBL), A6KRD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEKGDCIASVYGYDLGGRFTDFQPLGFGVNGLVLSATDSRACRKVAVKKIVLSDARSMKHALR EIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIADQHYSHKGYLSEGLVTK WYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEEL LRVMPSFVSSTWEVKRPLRKLLPDVNREAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPED EPTSQHPFRIEDEIDDLVLMAASQSQLSNWDRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSTP LAEDVQVDPRKDSQSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYS EPKLILDLSHWKQAASAPPRAAVAADPVSREDEPASLFLEIAQWVKSTQGGPERASPPPDAPEP RLSASPPGHPTPIDGGASPQFDLDVFISRALKLCTKPEDLPENKLGDLNGACISEHPGDLVQTE AFSKERW hide sequence

RefSeq Acc Id:	XP_008770388 ⟸ XM_008772166
- Peptide Label:	isoform X1
- UniProtKB:	G3V9J9 (UniProtKB/TrEMBL), A6KRD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEKGDCIASVYGYDLGGRFTDFQPLGFGVNGLVLSATDSRACRKVAVKKIVLSDARSMKHALR EIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIADQHYSHKGYLSEGLVTK WYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEEL LRVMPSFVSSTWEVKRPLRKLLPDVNREAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPED EPTSQHPFRIEDEIDDLVLMAASQSQLSNWDRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSTP LAEDVQVDPRKDSQSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYS EPKLILDLSHWKQAASAPPRAAVAADPVSREDEPASLFLEIAQWVKSTQGGPERASPPPDAPEP RLSASPPGHPTPIDGGASPQFDLDVFISRALKLCTKPEDLPENKLGDLNGACISEHPGDLVQTE AFSKERW hide sequence

RefSeq Acc Id:	XP_017456503 ⟸ XM_017601014
- Peptide Label:	isoform X1
- UniProtKB:	G3V9J9 (UniProtKB/TrEMBL), A6KRD4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEKGDCIASVYGYDLGGRFTDFQPLGFGVNGLVLSATDSRACRKVAVKKIVLSDARSMKHALR EIKIIRRLDHDNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEEHAKL FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIADQHYSHKGYLSEGLVTK WYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEEL LRVMPSFVSSTWEVKRPLRKLLPDVNREAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPED EPTSQHPFRIEDEIDDLVLMAASQSQLSNWDRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSTP LAEDVQVDPRKDSQSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYS EPKLILDLSHWKQAASAPPRAAVAADPVSREDEPASLFLEIAQWVKSTQGGPERASPPPDAPEP RLSASPPGHPTPIDGGASPQFDLDVFISRALKLCTKPEDLPENKLGDLNGACISEHPGDLVQTE AFSKERW hide sequence

RefSeq Acc Id:

ENSRNOP00000050164 ⟸ ENSRNOT00000047271

RefSeq Acc Id:	XP_038952979 ⟸ XM_039097051
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSRNOP00000083194 ⟸ ENSRNOT00000098156

RefSeq Acc Id:	XP_063133592 ⟸ XM_063277522
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063133593 ⟸ XM_063277523
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063133595 ⟸ XM_063277525
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063133594 ⟸ XM_063277524
- Peptide Label:	isoform X3

Protein Domains

Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q63454-F1-model_v2	AlphaFold	Q63454	1-274	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:3047	AgrOrtholog
BioCyc Gene	G2FUF-7047	BioCyc
Ensembl Genes	ENSRNOG00000015401	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000047271.6	UniProtKB/TrEMBL
	ENSRNOT00000098156.1	UniProtKB/TrEMBL
Gene3D-CATH	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Kinase-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MAPK_ERK3/4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:54268	UniProtKB/TrEMBL
NCBI Gene	54268	ENTREZGENE
PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MITOGEN-ACTIVATED PROTEIN KINASE 4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Mapk4	PhenoGen
PIRSF	Integrin-linked_kinase	UniProtKB/TrEMBL
PRINTS	ERK3ERK4MAPK	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015401	RatGTEx
SMART	S_TKc	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56112	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZYT0_RAT	UniProtKB/TrEMBL
	A6KRD4	ENTREZGENE, UniProtKB/TrEMBL
	G3V9J9	ENTREZGENE, UniProtKB/TrEMBL
	MK04_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Mapk4	mitogen-activated protein kinase 4		mitogen activated protein kinase 4	Name updated	1299863	APPROVED
2002-06-10	Mapk4	mitogen activated protein kinase 4			Name updated	70584	APPROVED

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in choroid plexus, hippocampus and lung	69881
gene_homology	has 94.5% identity to human p63(MAPK)	69881

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar