Ganc (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 3 | 127,807,132 - 127,858,995 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 3 | 127,807,441 - 127,859,859 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 3 | 107,353,369 - 107,406,104 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 107,353,369 - 107,405,241 (+) | Ensembl | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 3 | 111,028,306 - 111,080,046 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 119,623,870 - 119,675,614 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 117,284,251 - 117,336,001 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 112,173,907 - 112,226,886 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 112,173,907 - 112,226,023 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 118,721,646 - 118,774,625 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 3 | 106,892,422 - 106,944,283 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 3 | 106,261,571 - 106,313,280 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q35 | NCBI | | | | |
|
GANC (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 15 | 42,273,201 - 42,353,666 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 42,273,201 - 42,353,666 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 15 | 42,565,399 - 42,645,864 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 15 | 40,353,658 - 40,433,156 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Build 34 | 15 | 40,353,785 - 40,432,359 | NCBI | | | | | Celera | 15 | 19,334,065 - 19,413,574 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 19,414,521 - 19,494,038 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 42,684,852 - 42,764,352 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 40,079,234 - 40,159,701 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Ganc (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 2 | 120,234,377 - 120,291,347 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 120,234,377 - 120,292,181 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 2 | 120,403,896 - 120,460,866 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 120,403,896 - 120,461,700 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 2 | 120,229,632 - 120,286,602 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 120,229,632 - 120,286,602 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 121,558,392 - 121,615,221 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 60.31 | NCBI | | | | |
|
Ganc (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955416 | 8,990,852 - 9,063,826 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955416 | 8,990,852 - 9,063,840 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
GANC (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 30 | 9,253,731 - 9,329,070 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 9,254,274 - 9,319,407 (+) | Ensembl | | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 9,311,726 - 9,387,168 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 9,388,647 - 9,464,059 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 30 | 9,388,917 - 9,455,817 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 30 | 9,308,601 - 9,384,048 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 9,414,007 - 9,489,378 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 9,547,944 - 9,623,229 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Ganc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024408640 | 87,729,872 - 87,811,852 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936471 | 5,577,657 - 5,662,659 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936471 | 5,578,248 - 5,659,917 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
GANC (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 1 | 129,021,115 - 129,098,269 (-) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 129,021,114 - 129,098,313 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 143,913,341 - 143,990,702 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
GANC (Chlorocebus sabaeus - green monkey) |
|
Ganc (Heterocephalus glaber - naked mole-rat) |
|
Ganc (Rattus rattus - black rat) |
|