Cenpi (centromere protein I) - Rat Genome Database

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Gene: Cenpi (centromere protein I) Rattus norvegicus
Analyze
Symbol: Cenpi
Name: centromere protein I
RGD ID: 2631
Description: Involved in follicle-stimulating hormone signaling pathway. Predicted to be located in kinetochore and nuclear body. Predicted to be part of inner kinetochore. Orthologous to human CENPI (centromere protein I); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CENP-I; follicle stimulating hormone primary response gene 1; Follicle stimulating hormone primary response gene 1 (Leucine - rich primary resonse gene 1); follicle-stimulating hormone primary response protein; FSH primary response 1; FSH primary response protein 1; Fshprh1; leucine-rich primary response protein 1; LRPR1; RNALRP
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X101,809,192 - 101,860,935 (+)NCBIGRCr8
mRatBN7.2X97,515,919 - 97,567,671 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,515,972 - 97,567,657 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,190,524 - 99,241,792 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,700,326 - 102,751,618 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,203,727 - 100,255,009 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,147,045 - 105,198,798 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,147,153 - 105,198,797 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,786,667 - 121,837,546 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X121,860,099 - 121,910,978 (+)NCBI
CeleraX98,557,884 - 98,609,121 (+)NCBICelera
Cytogenetic MapXq32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,1-dichloroethene  (ISO)
1,2-dichloroethane  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-methylcholanthrene  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
aflatoxin M1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
aristolochic acid A  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-naphthoflavone  (EXP)
bisphenol A  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
folic acid  (ISO)
folpet  (ISO)
formaldehyde  (ISO)
FR900359  (ISO)
lead(0)  (ISO)
leflunomide  (ISO)
lucanthone  (ISO)
methotrexate  (ISO)
methyl methanesulfonate  (ISO)
N-nitrosodiethylamine  (EXP)
N-Nitrosopyrrolidine  (ISO)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
PCB138  (ISO)
perfluorononanoic acid  (ISO)
phenethyl isothiocyanate  (ISO)
phenobarbital  (ISO)
potassium chromate  (ISO)
propanal  (ISO)
quercetin  (ISO)
sodium arsenite  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
topotecan  (EXP)
trichostatin A  (ISO)
triclosan  (ISO)
trimellitic anhydride  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
urethane  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
inner kinetochore  (IBA,IEA,ISO)
kinetochore  (IEA,ISO)
nuclear body  (IEA,ISO)
nucleoplasm  (ISO)
nucleus  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Regulation of gene expression in Sertoli cells by follicle-stimulating hormone (FSH): cloning and characterization of LRPR1, a primary response gene encoding a leucine-rich protein. Slegtenhorst-Eegdeman KE, etal., Mol Cell Endocrinol 1995 Feb 27;108(1-2):115-24.
Additional References at PubMed
PMID:20212317  


Genomics

Comparative Map Data
Cenpi
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X101,809,192 - 101,860,935 (+)NCBIGRCr8
mRatBN7.2X97,515,919 - 97,567,671 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX97,515,972 - 97,567,657 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX99,190,524 - 99,241,792 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X102,700,326 - 102,751,618 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X100,203,727 - 100,255,009 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X105,147,045 - 105,198,798 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,147,153 - 105,198,797 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X121,786,667 - 121,837,546 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X121,860,099 - 121,910,978 (+)NCBI
CeleraX98,557,884 - 98,609,121 (+)NCBICelera
Cytogenetic MapXq32NCBI
CENPI
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X101,098,204 - 101,181,859 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX101,098,188 - 101,166,126 (+)EnsemblGRCh38hg38GRCh38
GRCh37X100,353,193 - 100,421,115 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X100,241,454 - 100,304,634 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X100,160,942 - 100,224,121NCBI
CeleraX100,873,565 - 100,936,744 (+)NCBICelera
Cytogenetic MapXq22.1NCBI
HuRefX90,157,955 - 90,222,098 (+)NCBIHuRef
CHM1_1X100,247,886 - 100,311,777 (+)NCBICHM1_1
T2T-CHM13v2.0X99,541,564 - 99,625,927 (+)NCBIT2T-CHM13v2.0
Cenpi
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X133,206,777 - 133,263,853 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX133,208,833 - 133,263,388 (+)EnsemblGRCm39 Ensembl
GRCm38X134,308,084 - 134,363,104 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX134,308,084 - 134,362,639 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X130,842,702 - 130,897,178 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X129,654,513 - 129,708,989 (+)NCBIMGSCv36mm8
CeleraX117,186,889 - 117,241,322 (+)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX56.08NCBI
Cenpi
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555037,237,080 - 7,341,702 (+)NCBIChiLan1.0ChiLan1.0
CENPI
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X100,696,625 - 100,765,308 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X100,699,991 - 100,768,912 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X90,299,867 - 90,366,294 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X100,434,703 - 100,501,745 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX100,438,622 - 100,501,041 (+)Ensemblpanpan1.1panPan2
CENPI
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X75,035,147 - 75,112,991 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX75,035,141 - 75,211,971 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X76,449,036 - 76,529,170 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX76,448,989 - 76,529,011 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X74,017,250 - 74,097,403 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X75,677,561 - 75,757,982 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X75,440,090 - 75,520,225 (+)NCBIUU_Cfam_GSD_1.0
Cenpi
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X63,230,229 - 63,303,962 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936813172,894 - 244,881 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936813171,187 - 224,442 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CENPI
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX82,776,447 - 82,825,655 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X82,776,375 - 82,826,651 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X90,692,350 - 90,742,559 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CENPI
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X89,434,711 - 89,502,782 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX89,437,651 - 89,504,340 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606514,357,290 - 14,426,270 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cenpi
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248148,820,811 - 8,823,072 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249021,391,144 - 1,500,323 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cenpi
223 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:149
Count of miRNA genes:122
Interacting mature miRNAs:143
Transcripts:ENSRNOT00000046288
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat

Markers in Region
SHGC-24065  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21144,137,408 - 144,137,535 (+)MAPPERmRatBN7.2
mRatBN7.2X97,527,445 - 97,527,572 (+)MAPPERmRatBN7.2
Rnor_6.01154,458,277 - 154,458,403NCBIRnor6.0
Rnor_6.0X105,158,590 - 105,158,716NCBIRnor6.0
Rnor_5.01160,762,736 - 160,762,863NCBIRnor5.0
Rnor_5.0X105,051,438 - 105,051,565NCBIRnor5.0
RGSC_v3.41146,835,283 - 146,835,409UniSTSRGSC3.4
RGSC_v3.4X121,797,723 - 121,797,849UniSTSRGSC3.4
CeleraX98,568,913 - 98,569,039UniSTS
Celera1142,369,035 - 142,369,161UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic MapXq34UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 10 49 113 91 90 59 25 59 6 216 96 93 44 60 31

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001431555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001431557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_012955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006257215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006257216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006257217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039099502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC094684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ235284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X90355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000046288   ⟹   ENSRNOP00000041317
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX97,515,972 - 97,567,657 (+)Ensembl
Rnor_6.0 EnsemblX105,147,534 - 105,198,797 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000088172   ⟹   ENSRNOP00000074172
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX97,515,972 - 97,567,657 (+)Ensembl
Rnor_6.0 EnsemblX105,147,153 - 105,188,725 (+)Ensembl
RefSeq Acc Id: NM_012955   ⟹   NP_037087
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,809,659 - 101,860,935 (+)NCBI
mRatBN7.2X97,516,386 - 97,567,666 (+)NCBI
Rnor_6.0X105,147,534 - 105,198,798 (+)NCBI
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBI
RGSC_v3.4X121,786,667 - 121,837,546 (+)RGD
CeleraX98,557,884 - 98,609,121 (+)RGD
Sequence:
RefSeq Acc Id: XM_006257215   ⟹   XP_006257277
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,809,210 - 101,860,935 (+)NCBI
mRatBN7.2X97,515,920 - 97,567,671 (+)NCBI
Rnor_6.0X105,147,045 - 105,198,798 (+)NCBI
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006257216   ⟹   XP_006257278
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,809,223 - 101,860,935 (+)NCBI
mRatBN7.2X97,515,920 - 97,567,671 (+)NCBI
Rnor_6.0X105,147,045 - 105,198,798 (+)NCBI
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006257217   ⟹   XP_006257279
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,809,192 - 101,860,935 (+)NCBI
mRatBN7.2X97,515,920 - 97,567,671 (+)NCBI
Rnor_6.0X105,147,045 - 105,198,798 (+)NCBI
Rnor_5.0X105,039,923 - 105,090,804 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039099502   ⟹   XP_038955430
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X101,809,210 - 101,850,918 (+)NCBI
mRatBN7.2X97,515,919 - 97,557,648 (+)NCBI
RefSeq Acc Id: NP_037087   ⟸   NM_012955
- UniProtKB: Q63517 (UniProtKB/Swiss-Prot),   A0A0G2K7E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006257279   ⟸   XM_006257217
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006257278   ⟸   XM_006257216
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006257277   ⟸   XM_006257215
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000041317   ⟸   ENSRNOT00000046288
Ensembl Acc Id: ENSRNOP00000074172   ⟸   ENSRNOT00000088172
RefSeq Acc Id: XP_038955430   ⟸   XM_039099502
- Peptide Label: isoform X2
- UniProtKB: A0A0G2K7E6 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q63517-F1-model_v2 AlphaFold Q63517 1-745 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701943
Promoter ID:EPDNEW_R12456
Type:multiple initiation site
Name:Cenpi_1
Description:centromere protein I
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X105,147,147 - 105,147,207EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2631 AgrOrtholog
BioCyc Gene G2FUF-1689 BioCyc
Ensembl Genes ENSRNOG00000033335 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000046288.5 UniProtKB/TrEMBL
  ENSRNOT00000088172.2 UniProtKB/TrEMBL
InterPro CENP-I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25448 UniProtKB/Swiss-Prot
NCBI Gene 25448 ENTREZGENE
PANTHER CENTROMERE PROTEIN I UniProtKB/Swiss-Prot
  CENTROMERE PROTEIN I UniProtKB/Swiss-Prot
  CENTROMERE PROTEIN I UniProtKB/TrEMBL
  CENTROMERE PROTEIN I UniProtKB/TrEMBL
Pfam CENP-I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cenpi PhenoGen
RatGTEx ENSRNOG00000033335 RatGTEx
UniProt A0A0G2K7E6 ENTREZGENE, UniProtKB/TrEMBL
  A6IVE9 ENTREZGENE, UniProtKB/TrEMBL
  CENPI_RAT UniProtKB/Swiss-Prot
  F1LP20 ENTREZGENE, UniProtKB/TrEMBL
  Q63517 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-02-15 Cenpi  centromere protein I  Fshprh1  FSH primary response 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Fshprh1  FSH primary response 1    follicle stimulating hormone primary response gene 1  Name updated 1299863 APPROVED
2002-11-06 Fshprh1  follicle stimulating hormone primary response gene 1    Follicle stimulating hormone primary response gene 1 (Leucine - rich primary resonse gene 1)  Name updated 625702 APPROVED
2002-06-10 Fshprh1  Follicle stimulating hormone primary response gene 1 (Leucine - rich primary resonse gene 1)      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_drugs mRNA upregulation by FSH mimicked by forskolin, indicating action is mediated by cAMP 728588
gene_expression mRNA expression is high in testis, ovary and spleen, and lower in brain and lung 728588
gene_process may be a primary response gene in FSH action on sertoli cells 728588
gene_protein cDNA has open reading frame of 2238 bp, encodes 746 aa protein of 85.6 kDa 728588
gene_regulation mRNA expression in sertoli cells upregulated by FSH 728588