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Gene: Tmem91 (transmembrane protein 91) Rattus norvegicus

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Symbol:

Tmem91

Name:

transmembrane protein 91

RGD ID:

2323264

Description:

Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be active in membrane. Orthologous to human TMEM91 (transmembrane protein 91); INTERACTS WITH 6-propyl-2-thiouracil; amphetamine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC100359879; RIKEN cDNA A830041P22-like

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TMEM91 (transmembrane protein 91)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Tmem91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tmem91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TMEM91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TMEM91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tmem91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TMEM91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TMEM91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tmem91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Tmem91 (transmembrane protein 91)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TMEM91 (transmembrane protein 91)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	TMEM91 (transmembrane protein 91)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem91 (transmembrane protein 91)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tmem91 (transmembrane protein 91)	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	tmem91 (transmembrane protein 91)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|PhylomeDB)
Danio rerio (zebrafish):	tmem91 (transmembrane protein 91)	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	tmem91	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	90,307,264 - 90,314,796 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	90,306,289 - 90,313,320 (-)	Ensembl				GRCr8
mRatBN7.2	1	81,179,483 - 81,187,005 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	81,179,156 - 81,185,164 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI		F344_StmMcwi
Rnor_6.0	1	82,463,824 - 82,471,310 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	82,464,024 - 82,468,064 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	80,878,451 - 80,888,971 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	75,619,219 - 75,626,621 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17beta-estradiol (ISO)

2-hydroxypropanoic acid (ISO)

5-aza-2'-deoxycytidine (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

amphetamine (EXP)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (EXP)

buta-1,3-diene (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

chrysene (ISO)

cisplatin (ISO)

Cuprizon (EXP)

diuron (ISO)

methamphetamine (EXP)

methapyrilene (ISO)

N-ethyl-N-nitrosourea (ISO)

okadaic acid (ISO)

ozone (ISO)

pioglitazone (ISO)

rac-lactic acid (ISO)

sodium arsenite (ISO)

tributylstannane (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

hematopoietic progenitor cell differentiation (ISO)

Cellular Component

membrane (IBA,IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:24029230

Genomics

Comparative Map Data

Tmem91
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	90,307,264 - 90,314,796 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	90,306,289 - 90,313,320 (-)	Ensembl				GRCr8
mRatBN7.2	1	81,179,483 - 81,187,005 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	81,179,156 - 81,185,164 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI		F344_StmMcwi
Rnor_6.0	1	82,463,824 - 82,471,310 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	82,464,024 - 82,468,064 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	80,878,451 - 80,888,971 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	75,619,219 - 75,626,621 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

TMEM91
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	41,363,947 - 41,384,083 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	41,350,911 - 41,384,083 (+)	Ensembl			hg38	GRCh38
GRCh37	19	41,869,852 - 41,889,988 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	46,561,711 - 46,581,828 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	38,669,744 - 38,689,857 (+)	NCBI		Celera
Cytogenetic Map	19	q13.2	NCBI
HuRef	19	38,301,672 - 38,321,836 (+)	NCBI		HuRef
CHM1_1	19	41,869,535 - 41,889,665 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	44,184,527 - 44,205,320 (+)	NCBI		T2T-CHM13v2.0

Tmem91
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	25,368,564 - 25,379,011 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	25,368,564 - 25,374,591 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	25,669,139 - 25,679,623 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	25,669,139 - 25,675,166 (-)	Ensembl			mm10	GRCm38
MGSCv37	7	26,454,158 - 26,460,185 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	25,377,902 - 25,383,926 (-)	NCBI		MGSCv36	mm8
Celera	7	20,278,052 - 20,284,079 (-)	NCBI		Celera
Cytogenetic Map	7	A3	NCBI
cM Map	7	13.97	NCBI

Tmem91
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955555	322,783 - 326,599 (+)	Ensembl
ChiLan1.0	NW_004955555	322,899 - 326,450 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM91
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	47,561,053 - 47,594,517 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	49,429,840 - 49,463,397 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	38,356,797 - 38,377,601 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	46,863,054 - 46,884,051 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	46,853,711 - 46,884,051 (+)	Ensembl			panPan2	panpan1.1

TMEM91
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	112,610,660 - 112,615,813 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	112,014,835 - 112,019,876 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	113,208,786 - 113,213,827 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	113,175,101 - 113,213,830 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	112,770,057 - 112,775,098 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	112,402,378 - 112,407,419 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	113,395,678 - 113,400,721 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Tmem91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	15,356,164 - 15,360,365 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936661	3,783,709 - 3,788,244 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936661	3,784,545 - 3,788,434 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM91
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	49,367,733 - 49,371,294 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	6	49,366,073 - 49,372,419 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	45,159,094 - 45,165,389 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM91
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	35,695,646 - 35,703,428 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	35,696,059 - 35,705,040 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666073	13,932,349 - 13,940,105 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem91
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624907	193,648 - 196,175 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624907	192,439 - 195,929 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Tmem91
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	169,118,509 - 169,124,202 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Tmem91
47 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	79
Count of miRNA genes:	69
Interacting mature miRNAs:	75
Transcripts:	ENSRNOT00000038300
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	87889942	132889942	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
1331800	Scl25	Serum cholesterol level QTL 25	3.013		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	87785026	142582336	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	83019780	128019780	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	81269860	99645535	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	84107164	115183752	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
4889962	Bss94	Bone structure and strength QTL 94	3.8		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	51909206	91302615	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	86622262	131622262	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	86993904	131993904	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	87558587	132558587	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat

Markers in Region

BF415780

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	81,179,601 - 81,180,865 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	82,463,943 - 82,465,206	NCBI	Rnor6.0
Rnor_5.0	1	83,725,451 - 83,726,714	UniSTS	Rnor5.0
RGSC_v3.4	1	80,878,570 - 80,879,833	UniSTS	RGSC3.4
Celera	1	75,619,338 - 75,620,601	UniSTS
RH 3.4 Map	1	824.9	UniSTS

RH132301

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	81,179,557 - 81,180,865 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	82,463,899 - 82,465,206	NCBI	Rnor6.0
Rnor_5.0	1	83,725,407 - 83,726,714	UniSTS	Rnor5.0
RGSC_v3.4	1	80,878,526 - 80,879,833	UniSTS	RGSC3.4
Celera	1	75,619,294 - 75,620,601	UniSTS
RH 3.4 Map	1	826.5	UniSTS

ha3298

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	81,184,930 - 81,186,620 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	82,469,272 - 82,470,961	NCBI	Rnor6.0
Rnor_6.0	7	28,663,125 - 28,664,502	NCBI	Rnor6.0
Rnor_5.0	7	28,772,834 - 28,774,211	UniSTS	Rnor5.0
Rnor_5.0	1	83,730,780 - 83,732,469	UniSTS	Rnor5.0
RGSC_v3.4	1	80,883,899 - 80,885,588	UniSTS	RGSC3.4
Celera	7	19,689,953 - 19,691,337	UniSTS
Celera	1	75,624,667 - 75,626,356	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
9	15	12	137	241	83	82	57	136	51	21	454	314	11	219	75	91	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432694	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002725551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_002728716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017590020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039093621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC134759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000038300 ⟹ ENSRNOP00000030003

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	82,464,024 - 82,468,064 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119162 ⟹ ENSRNOP00000094291

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	90,306,408 - 90,312,920 (-)	Ensembl
mRatBN7.2 Ensembl	1	81,179,156 - 81,185,164 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121624 ⟹ ENSRNOP00000100779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	90,306,463 - 90,312,623 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000167000 ⟹ ENSRNOP00000111140

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	90,306,289 - 90,313,320 (-)	Ensembl

RefSeq Acc Id:

NM_001432689 ⟹ NP_001419618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432690 ⟹ NP_001419619

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432691 ⟹ NP_001419620

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432692 ⟹ NP_001419621

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432693 ⟹ NP_001419622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432694 ⟹ NP_001419623

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432695 ⟹ NP_001419624

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

NM_001432696 ⟹ NP_001419625

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Dahl_SR_JrHsd	1	88,927,207 - 88,932,893 (-)	NCBI
Lyon_Normotensive	1	94,064,039 - 94,069,725 (-)	NCBI
Lyon_Hypertensive	1	90,607,718 - 90,613,416 (-)	NCBI
F344_StmMcwi	1	89,052,532 - 89,058,218 (-)	NCBI

RefSeq Acc Id:

XM_002728716 ⟹ XP_002728762

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,313,184 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,185,354 (-)	NCBI
Rnor_6.0	1	82,463,824 - 82,471,310 (-)	NCBI
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI
RGSC_v3.4	1	80,878,451 - 80,888,971 (-)	RGD

Sequence:

show sequence

ACAAGCCCCCCAGGCCTTCCCTGGAAGAGGTGGACTGAGGAGGCGCTACAAGGCCATAGTTTAC
CTTGACAGGAATTCGCCACTAGGAGGGAAAGGAGGGTGGGCTGTCACTGAGCTCAGTGGTCTGA
TGGAAAAATGAGGCTGGTAGGAGTTCATACCGTTATCCTTCGAGTCTGAAAGGAGGGCCTACTT
TATGCCAGGCAATGTTTTCTGGCCCGAGGCACAGCCCTGAACAAAAGAAAATAAATCCCAGACC
CGGGGGAGCTGATGCTGATGGGAGCAGGCAGGAAGCATGCAAACGGAAGAGGTTAGCAGTTTTT
TACTTGGTGTAAAAGACAACTGGAGCAAGAGGAAGGAGCTAGTAAATACGTTCTGGTGAAAACC
ATCCTGGCCCTTGCCCCTGGCATTATCCCTCCTGTGGGTCTCTGTGCCAGAAACTCAGACTGAG
CCAAGCGTGCTCCCAGACGCCATCTGCTCTCTCTGGGAGTGGGGCCCGTGCCAGCTTGAGTGTT
TGGACTCTTGGCAAAGTTCCCTGGCACCCTAGAGCTAGGGAACTCCAGGGCCCCACATCAGGCC
AGGGGAATCCTCCCCGTCTAGCCAGATGGAGGACTGCAGGAGAGGGAGGCAGTGAAAGCTGTGT
GGGCTTCCTGAAGGAGGGGGATGTCTTGGAGAGCCAGGAGAATTCTTCAGTTGAACAGGCATGA
GTTATGAACAATAAAATTGATAGACACATTTCACGTGTTCACCGCGCATACTTTGCCAGGTTTT
GGGTAAATGTGTGGGCATTTGTTGTCACATCTAAGTTAAATCCATATGTTGGGCTGTTGAAATG
ACTCGGGAACGGGGAGTTTGCTGCTAATCCTGTAACCTGTGTTGGATCCCAAGTACATACCTGG
TGGAAGAAAATAATCTACTCCTACAACTCGTCCTCTGATTTCTACTCATGCCTGCTCTATGCAG
CATGTGTGCACCACACAATAAATAAGTGTAATGAAATAAATTTAATTGTATGTCATCACATCTA
GGAGTCTGGGCATACGTCCTGAGTTTTCAGATGAAGGAACGTAAGTTTAGACAGATAAAGCTAT
CTATGGTCCAAAGTACACACCAAGTGCCTTGAGATGCCTGCAAAGGACCCGTATGCAGAAAGCC
CAATCCTGAATCACGGACACCACCAGAGACACTGATGAATGCTTATAGCACCCCTTCCTAGACC
ATTCCTCGGCCTCTGTCCTCAGTCTTCCTACCTCGGCTTCTTCGCTTCCTCGAGGTCAGTAAGG
AATTCAGCTGCGGTCTGTTGGCACTAGTTCCATTTGTTTGTGTCAGCACAGGCGCCAGTGTCCT
GGCCTCAGTTTCCTCATCTGCAAATTGAAAGGAATGCAGCTAGCACGGGGCCAGGGGCAGCATC
CGCACTCATTGAACAAGCTGTGTTCTCGGGCCAGTTACTTCACCTCTCTGCGCCTCTTTGCTGC
GGTGTAAAATAAGACCATATACCGTGCCTCTTAGAATTGTTCTGTGTCTGTGTATATTTAAAGC
ACCTCTTAGAACAAGGCACAAAGCTGTGGTCGGTGCTATTACTGTTGTTGCGGGGCCATCTTTT
TGGGGGAGGAAAGTGGGGTCCAGCCATGTTCCAACCAACAGGTTTCAGCCTCCTTAAGGGAGAA
GCTGCTGCTGGCTCTGGGACCCCCAGAGTCGAAGAAGCCTTCAAGACCCCCTCCCGGGGCACCG
CGGATAGGCGGAGTCTGGAGCTATTGCCCCGCCTCTCTCCTCCCACTGCGCGCTGCGGGGTGGC
CGGGGCGCAGAGACCAAAGCGCAGCTCAGCAGCTCTCAGACCCTGTACGGGGTACCCGGGACAC
CCGATCTCTGGGTTCAGGTTTGCCCATCTCTGGGCGGCAGGGCAAGGTCTCTTTACTATAGCCA
TGGACAACTCCAGCATACAGGAACTCCAGCAACCCTTACTGCCAAGCGTAACCTGGGACCTCCT
TGCTTCCAAGTCTGAGAAACCAGAGCTGGGAACCCTCTTCCCAGAAACTGCCTTTGCAGATTCC
CCGAGAGGCTGGCAGCTTCTTCTCCCACCTCTTCCTTCAGTGAGCGCTGGCCTGGGGGAGCCTG
AGACCCCTGACCTTGAGGACACATCATCCAGTGACAGTGACTCAGATGATGATGGGGGTGACCG
GCTCTCTCCACTTCTTCCCCATGACCACCTGGGCCTGGCGGTGTTCTCTGTGCTGTGCTGCTTT
TGGCCTGTGGGCATCGCTGCCTTCTGTCTGGCCCACAAGACCAGCAAGGCTTGGGCCAAGGGGG
ACGTCCAAGGGGCAGGGGCTGCCTCCCGCCGTGCTTTCCTGCTGGGGGTCCTTGCCGTGGGGCT
GGGCCTGTGCACATATGCGGCTGCCCTGGTGACCTTGGCTGCCTACCTTGCCTCCCGAGACCCG
CCCTAGTTGCTCTTCGGCCCCCACTGTGAATGCAGAGACCAGAGGACCATCAAACCCGTGAGCA
GAATGGATGATCTTGGTGCACACATGGTGACGGCGAGGACATCACTCAGAAACAAGTCAGCTGG
AGGTCCCCTCCCTTTCCTGGCCACCCCCACCCTCCAGAAAGAAGCAATGTGAGAGATTAAAGAT
ACCCTGAAGCCAAA

hide sequence

RefSeq Acc Id:

XM_006228522 ⟹ XP_006228584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,313,148 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,185,336 (-)	NCBI
Rnor_6.0	1	82,463,824 - 82,471,306 (-)	NCBI
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI

Sequence:

show sequence

GCCCCCCAGGCCTTCCCTGGAAGAGGTGGACTGAGGAGGCGCTACAAGGCCATAGTTTACCTTG
ACAGGAATTCGCCACTAGGAGGGAAAGGAGGGTGGGCTGTCACTGAGCTCAGTGGTCTGATGGA
AAAATGAGGCTGGTAGGAGTTCATACCGTTATCCTTCGAGTCTGAAAGGAGGGCCTACTTTATG
CCAGGCAATGTTTTCTGGCCCGAGGCACAGCCCTGAACAAAAGAAAATAAATCCCAGACCCGGG
GGAGCTGATGCTGATGGGAGCAGGCAGGAAGCATGCAAACGGAAGAGGTTAGCAGTTTTTTACT
TGGTGTAAAAGACAACTGGAGCAAGAGGAAGGAGCTAGTAAATACGTTCTGGTGAAAACCATCC
TGGCCCTTGCCCCTGGCATTATCCCTCCTGTGGGTCTCTGTGCCAGAAACTCAGACTGAGCCAA
GCGTGCTCCCAGACGCCATCTGCTCTCTCTGGGAGTGGGGCCCGTGCCAGCTTGAGTGTTTGGA
CTCTTGGCAAAGTTCCCTGGCACCCTAGAGCTAGGGAACTCCAGGGCCCCACATCAGGCCAGGG
GAATCCTCCCCGTCTAGCCAGATGGAGGACTGCAGGAGAGGGAGGCAGTGAAAGCTGTGTGGGC
TTCCTGAAGGAGGGGGATGTCTTGGAGAGCCAGGAGAATTCTTCAGTTGAACAGGCATGAGTTA
TGAACAATAAAATTGATAGACACATTTCACGTGTTCACCGCGCATACTTTGCCAGGTTTTGGGT
AAATGTGTGGGCATTTGTTGTCACATCTAAGTTAAATCCATATGTTGGGCTGTTGAAATGACTC
GGGAACGGGGAGTTTGCTGCTAATCCTGTAACCTGTGTTGGATCCCAAGTACATACCTGGTGGA
AGAAAATAATCTACTCCTACAACTCGTCCTCTGATTTCTACTCATGCCTGCTCTATGCAGCATG
TGTGCACCACACAATAAATAAGTGTAATGAAATAAATTTAATTGTATGTCATCACATCTAGGAG
TCTGGGCATACGTCCTGAGTTTTCAGATGAAGGAACGTAAGTTTAGACAGATAAAGCTATCTAT
GGTCCAAAGTACACACCAAGTGCCTTGAGATGCCTGCAAAGGACCCGTATGCAGAAAGCCCAAT
CCTGAATCACGGACACCACCAGAGACACTGATGAATGCTTATAGCACCCCTTCCTAGACCATTC
CTCGGCCTCTGTCCTCAGTCTTCCTACCTCGGCTTCTTCGCTTCCTCGAGGTCAGTAAGGAATT
CAGCTGCGGTCTGTTGGCACTAGTTCCATTTGTTTGTGTCAGCACAGGCGCCAGTGTCCTGGCC
TCAGTTTCCTCATCTGCAAATTGAAAGGAATGCAGCTAGCACGGGGCCAGGGGCAGCATCCGCA
CTCATTGAACAAGCTGTGTTCTCGGGCCAGTTACTTCACCTCTCTGCGCCTCTTTGCTGCGGTG
TAAAATAAGACCATATACCGTGCCTCTTAGAATTGTTCTGTGTCTGTGTATATTTAAAGCACCT
CTTAGAACAAGGCACAAAGCTGTGGTCGGTGCTATTACTGTTGTTGCGGGGCCATCTTTTTGGG
GGAGGAAAGTGGGGTCCAGCCATGTTCCAACCAACAGGTTTCAGCCTCCTTAAGGGAGAAGCTG
CTGCTGGCTCTGGGACCCCCAGAGTCGAAGAAGCCTTCAAGACCCCCTCCCGGGGCACCGCGGA
TAGGCGGAGTCTGGAGCTATTGCCCCGCCTCTCTCCTCCCACTGCGCGCTGCGGGGTGGCCGGG
GCGCAGAGACCAAAGCGCAGCTCAGCAGCTCTCAGACCCTGTACGGGGTACCCGGGACACCCGA
TCTCTGGGTTCAGGTTTGCCCATCTCTGGGCGGCAGGGCAAGGTCTCTTTACTATAGCCATGGA
CAACTCCAGCATACAGGAACTCCAGCAACCCTTACTGCCAAGCGTAACCTGGGACCTCCTTGCT
TCCAAGTCTGAGAAACCAGAGCTGGGAACCCTCTTCCCAGAAACTGCCTTTGCAGATTCCCCGA
GAGGCTGGCAGCTTCTTCTCCCACCTCTTCCTTCAGTGAGCGCTGGCCTGGGGGAGCCTGAGAC
CCCTGACCTTGAGGACACATCATCCAGTGACAGTGACTCAGATGATGATGGGGGTGACCGGCTC
TCTCCACTTCTTCCCCATGACCACCTGGGCCTGGCGGTGTTCTCTGTGCTGTGCTGCTTTTGGC
CTGTGGGCATCGCTGCCTTCTGTCTGGCCCACAAGACCCGCCCTAGTTGCTCTTCGGCCCCCAC
TGTGAATGCAGAGACCAGAGGACCATCAAACCCGTGAGCAGAATGGATGATCTTGGTGCACACA
TGGTGACGGCGAGGACATCACTCAGAAACAAGTCAGCTGGAGGTCCCCTCCCTTTCCTGGCCAC
CCCCACCCTCCAGAAAGAAGCAATGTGAGAGATTAAAGATACCCTGAAGCCAAA

hide sequence

RefSeq Acc Id:

XM_006228525 ⟹ XP_006228587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,312,983 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,185,202 (-)	NCBI
Rnor_6.0	1	82,463,824 - 82,469,497 (-)	NCBI
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI

Sequence:

show sequence

CAGCTCAGCAGCTCTCAGACCCTGTACGGGGTACCCGGGACACCCGATCTCTGGGTTCAGGTTT
GCCCATCTCTGGGCGGCAGGGCAAGACAGGATTTCTCTGTATGTCCTTGGCTGCCTTGAACTTG
CCTTGTGGACCAGGCTGTCCTGGAACTTAAGAGATCCACTTTCCTCTGCCTCCCAAGTGCTAGG
ATTAAAGGTCTCTTTACTATAGCCATGGACAACTCCAGCATACAGGAACTCCAGCAACCCTTAC
TGCCAAGCGTAACCTGGGACCTCCTTGCTTCCAAGTCTGAGAAACCAGAGCTGGGAACCCTCTT
CCCAGAAACTGCCTTTGCAGATTCCCCGAGAGGCTGGCAGCTTCTTCTCCCACCTCTTCCTTCA
GTGAGCGCTGGCCTGGGGGAGCCTGAGACCCCTGACCTTGAGGACACATCATCCAGTGACAGTG
ACTCAGATGATGATGGGGGTGACCGGCTCTCTCCACTTCTTCCCCATGACCACCTGGGCCTGGC
GGTGTTCTCTGTGCTGTGCTGCTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTGGCCCACAAG
ACCAGCAAGGCTTGGGCCAAGGGGGACGTCCAAGGGGCAGGGGCTGCCTCCCGCCGTGCTTTCC
TGCTGGGGGTCCTTGCCGTGGGGCTGGGCCTGTGCACATATGCGGCTGCCCTGGTGACCTTGGC
TGCCTACCTTGCCTCCCGAGACCCGCCCTAGTTGCTCTTCGGCCCCCACTGTGAATGCAGAGAC
CAGAGGACCATCAAACCCGTGAGCAGAATGGATGATCTTGGTGCACACATGGTGACGGCGAGGA
CATCACTCAGAAACAAGTCAGCTGGAGGTCCCCTCCCTTTCCTGGCCACCCCCACCCTCCAGAA
AGAAGCAATGTGAGAGATTAAAGATACCCTGAAGCCAAA

hide sequence

RefSeq Acc Id:

XM_006228526 ⟹ XP_006228588

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,312,867 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,185,178 (-)	NCBI
Rnor_6.0	1	82,463,824 - 82,469,497 (-)	NCBI
Rnor_5.0	1	83,722,963 - 83,731,803 (-)	NCBI

Sequence:

show sequence

CAGCTCAGCAGCTCTCAGACCCTGTACGGGGTACCCGGGACACCCGATCTCTGGGTTCAGGTTT
GCCCATCTCTGGGCGGCAGGGCAAGGATTTCTCTGTATGTCCTTGGCTGCCTTGAACTTGCCTT
GTGGACCAGGCTGTCCTGGAACTTAAGAGATCCACTTTCCTCTGCCTCCCAAGTGCTAGGATTA
AAGGTCTCTTTACTATAGCCATGGACAACTCCAGCATACAGGAACTCCAGCAACCCTTACTGCC
AAGCGTAACCTGGGACCTCCTTGCTTCCAAGTCTGAGAAACCAGAGCTGGGAACCCTCTTCCCA
GAAACTGCCTTTGCAGATTCCCCGAGAGGCTGGCAGCTTCTTCTCCCACCTCTTCCTTCAGTGA
GCGCTGGCCTGGGGGAGCCTGAGACCCCTGACCTTGAGGACACATCATCCAGTGACAGTGACTC
AGATGATGATGGGGGTGACCGGCTCTCTCCACTTCTTCCCCATGACCACCTGGGCCTGGCGGTG
TTCTCTGTGCTGTGCTGCTTTTGGCCTGTGGGCATCGCTGCCTTCTGTCTGGCCCACAAGACCA
GCAAGGCTTGGGCCAAGGGGGACGTCCAAGGGGCAGGGGCTGCCTCCCGCCGTGCTTTCCTGCT
GGGGGTCCTTGCCGTGGGGCTGGGCCTGTGCACATATGCGGCTGCCCTGGTGACCTTGGCTGCC
TACCTTGCCTCCCGAGACCCGCCCTAGTTGCTCTTCGGCCCCCACTGTGAATGCAGAGACCAGA
GGACCATCAAACCCGTGAGCAGAATGGATGATCTTGGTGCACACATGGTGACGGCGAGGACATC
ACTCAGAAACAAGTCAGCTGGAGGTCCCCTCCCTTTCCTGGCCACCCCCACCCTCCAGAAAGAA
GCAATGTGAGAGATTAAAGATACCCTGAAGCCAAA

hide sequence

RefSeq Acc Id:

XM_039093602 ⟹ XP_038949530

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,313,160 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,185,346 (-)	NCBI

RefSeq Acc Id:

XM_039093604 ⟹ XP_038949532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,312,399 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,184,624 (-)	NCBI

RefSeq Acc Id:

XM_039093613 ⟹ XP_038949541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,314,796 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,187,005 (-)	NCBI

RefSeq Acc Id:

XM_039093621 ⟹ XP_038949549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,311,935 (-)	NCBI
mRatBN7.2	1	81,179,483 - 81,184,061 (-)	NCBI

RefSeq Acc Id:

XM_063277674 ⟹ XP_063133744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,308,593 - 90,313,182 (-)	NCBI

RefSeq Acc Id:

XM_063277675 ⟹ XP_063133745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	90,307,264 - 90,312,381 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001419618	(Get FASTA)	NCBI Sequence Viewer
	NP_001419619	(Get FASTA)	NCBI Sequence Viewer
	NP_001419620	(Get FASTA)	NCBI Sequence Viewer
	NP_001419621	(Get FASTA)	NCBI Sequence Viewer
	NP_001419622	(Get FASTA)	NCBI Sequence Viewer
	NP_001419623	(Get FASTA)	NCBI Sequence Viewer
	NP_001419624	(Get FASTA)	NCBI Sequence Viewer
	NP_001419625	(Get FASTA)	NCBI Sequence Viewer
	XP_002728762	(Get FASTA)	NCBI Sequence Viewer
	XP_006228584	(Get FASTA)	NCBI Sequence Viewer
	XP_006228587	(Get FASTA)	NCBI Sequence Viewer
	XP_006228588	(Get FASTA)	NCBI Sequence Viewer
	XP_038949530	(Get FASTA)	NCBI Sequence Viewer
	XP_038949532	(Get FASTA)	NCBI Sequence Viewer
	XP_038949541	(Get FASTA)	NCBI Sequence Viewer
	XP_038949549	(Get FASTA)	NCBI Sequence Viewer
	XP_063133744	(Get FASTA)	NCBI Sequence Viewer
	XP_063133745	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM08002	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000094291.1
	ENSRNOP00000100779
	ENSRNOP00000100779.1
	ENSRNOP00000111140
	ENSRNOP00000111140.1

RefSeq Acc Id:

XP_002728762 ⟸ XM_002728716

- Peptide Label:

isoform X1

- Sequence:

show sequence

MFQPTGFSLLKGEAAAGSGTPRVEEAFKTPSRGTADRRSLELLPRLSPPTARCGVAGAQRPKRS
SAALRPCTGYPGHPISGFRFAHLWAAGQGLFTIAMDNSSIQELQQPLLPSVTWDLLASKSEKPE
LGTLFPETAFADSPRGWQLLLPPLPSVSAGLGEPETPDLEDTSSSDSDSDDDGGDRLSPLLPHD
HLGLAVFSVLCCFWPVGIAAFCLAHKTSKAWAKGDVQGAGAASRRAFLLGVLAVGLGLCTYAAA
LVTLAAYLASRDPP

hide sequence

RefSeq Acc Id:

XP_006228584 ⟸ XM_006228522

- Peptide Label:

isoform X2

- Sequence:

show sequence

MFQPTGFSLLKGEAAAGSGTPRVEEAFKTPSRGTADRRSLELLPRLSPPTARCGVAGAQRPKRS
SAALRPCTGYPGHPISGFRFAHLWAAGQGLFTIAMDNSSIQELQQPLLPSVTWDLLASKSEKPE
LGTLFPETAFADSPRGWQLLLPPLPSVSAGLGEPETPDLEDTSSSDSDSDDDGGDRLSPLLPHD
HLGLAVFSVLCCFWPVGIAAFCLAHKTRPSCSSAPTVNAETRGPSNP

hide sequence

RefSeq Acc Id:	XP_006228587 ⟸ XM_006228525
- Peptide Label:	isoform X6
- UniProtKB:	D4A8D1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNSSIQELQQPLLPSVTWDLLASKSEKPELGTLFPETAFADSPRGWQLLLPPLPSVSAGLGEP ETPDLEDTSSSDSDSDDDGGDRLSPLLPHDHLGLAVFSVLCCFWPVGIAAFCLAHKTSKAWAKG DVQGAGAASRRAFLLGVLAVGLGLCTYAAALVTLAAYLASRDPP hide sequence

RefSeq Acc Id:	XP_006228588 ⟸ XM_006228526
- Peptide Label:	isoform X6
- UniProtKB:	D4A8D1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDNSSIQELQQPLLPSVTWDLLASKSEKPELGTLFPETAFADSPRGWQLLLPPLPSVSAGLGEP ETPDLEDTSSSDSDSDDDGGDRLSPLLPHDHLGLAVFSVLCCFWPVGIAAFCLAHKTSKAWAKG DVQGAGAASRRAFLLGVLAVGLGLCTYAAALVTLAAYLASRDPP hide sequence

Ensembl Acc Id:

ENSRNOP00000030003 ⟸ ENSRNOT00000038300

RefSeq Acc Id:	XP_038949541 ⟸ XM_039093613
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038949530 ⟸ XM_039093602
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038949532 ⟸ XM_039093604
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038949549 ⟸ XM_039093621
- Peptide Label:	isoform X8

Ensembl Acc Id:

ENSRNOP00000094291 ⟸ ENSRNOT00000119162

RefSeq Acc Id:	XP_063133745 ⟸ XM_063277675
- Peptide Label:	isoform X7
- UniProtKB:	A6J982 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063133744 ⟸ XM_063277674
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSRNOP00000100779 ⟸ ENSRNOT00000121624

Ensembl Acc Id:

ENSRNOP00000111140 ⟸ ENSRNOT00000167000

RefSeq Acc Id:

NP_001419624 ⟸ NM_001432695

RefSeq Acc Id:

NP_001419622 ⟸ NM_001432693

RefSeq Acc Id:

NP_001419619 ⟸ NM_001432690

RefSeq Acc Id:

NP_001419621 ⟸ NM_001432692

RefSeq Acc Id:

NP_001419618 ⟸ NM_001432689

RefSeq Acc Id:

NP_001419625 ⟸ NM_001432696

RefSeq Acc Id:

NP_001419623 ⟸ NM_001432694

RefSeq Acc Id:

NP_001419620 ⟸ NM_001432691

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A8D1-F1-model_v2	AlphaFold	D4A8D1	1-172	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:2323264	AgrOrtholog
BioCyc Gene	G2FUF-60373	BioCyc
Ensembl Genes	ENSRNOG00000021302	Ensembl
	ENSRNOG00000068180	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000119162.2	UniProtKB/TrEMBL
	ENSRNOT00000121624	ENTREZGENE
	ENSRNOT00000121624.1	UniProtKB/TrEMBL
	ENSRNOT00000167000	ENTREZGENE
	ENSRNOT00000167000.1	UniProtKB/TrEMBL
InterPro	CD225/Dispanin_fam	UniProtKB/TrEMBL
NCBI Gene	100359879	ENTREZGENE
PANTHER	TRANSMEMBRANE PROTEIN 91	UniProtKB/TrEMBL
	UPF0338 PROTEIN	UniProtKB/TrEMBL
Pfam	CD225	UniProtKB/TrEMBL
PhenoGen	Tmem91	PhenoGen
RatGTEx	ENSRNOG00000021302	RatGTEx
	ENSRNOG00000068180	RatGTEx
UniProt	A0A8I6GKN9	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LKI8_RAT	UniProtKB/TrEMBL
	A0ABK0M287_RAT	UniProtKB/TrEMBL
	A6J980	ENTREZGENE, UniProtKB/TrEMBL
	A6J982	ENTREZGENE, UniProtKB/TrEMBL
	D4A8D1	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-07-26	Tmem91	transmembrane protein 91	LOC100359879	RIKEN cDNA A830041P22-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2010-05-06	LOC100359879	RIKEN cDNA A830041P22-like			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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