Adig (Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCr8 | 3 | 167,574,963 - 167,580,296 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 3 | 167,574,925 - 167,580,297 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 3 | 147,155,079 - 147,160,412 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 147,154,097 - 147,160,490 (+) | Ensembl | | | | mRatBN7.2 | mRatBN7.2 Ensembl | 3 | 147,154,097 - 147,160,490 (+) | NCBI | | | | mRatBN7.2 | UTH_Rnor_SHR_Utx | 3 | 150,987,048 - 150,992,774 (+) | NCBI | UTH_Rnor_SHR_Utx | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 159,486,351 - 159,492,077 (+) | NCBI | UTH_Rnor_SHRSP_BbbUtx_1.0 | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 157,221,725 - 157,227,468 (+) | NCBI | UTH_Rnor_WKY_Bbb_1.0 | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 153,946,828 - 153,952,269 (-) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 154,986,059 - 154,988,952 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 153,949,215 - 153,952,108 (-) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 161,639,906 - 161,645,288 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | RGSC_v3.4 | 3 | 149,218,511 - 149,223,790 (+) | NCBI | RGSC_v3.4 | RGSC_v3.4 | rn4 | | Celera | 3 | 145,855,708 - 145,860,987 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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ADIG (Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCh38 | 20 | 38,581,197 - 38,588,463 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 38,581,195 - 38,588,463 (+) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 20 | 37,209,840 - 37,217,106 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 36,643,252 - 36,650,518 (+) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 20 | 33,920,630 - 33,927,890 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.23 | NCBI | | | | | HuRef | 20 | 33,946,688 - 33,953,948 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 37,114,048 - 37,121,308 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 40,310,849 - 40,318,109 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Adig (Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
GRCm39 | 2 | 158,344,532 - 158,350,118 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 158,344,532 - 158,350,118 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 2 | 158,502,612 - 158,508,198 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 158,502,612 - 158,508,198 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 2 | 158,328,348 - 158,333,934 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 158,194,053 - 158,199,639 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 164,440,031 - 164,445,612 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 78.72 | NCBI | | | | |
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Adig (Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
ChiLan1.0 Ensembl | NW_004955445 | 18,134,092 - 18,138,161 (-) | Ensembl | | | | | ChiLan1.0 | NW_004955445 | 18,134,107 - 18,138,198 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100969235 (Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
NHGRI_mPanPan1-v2 | 21 | 44,306,400 - 44,313,798 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 44,299,534 - 44,306,896 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 34,905,712 - 34,913,078 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 36,014,031 - 36,021,281 (+) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 36,014,078 - 36,018,939 (+) | Ensembl | | | panPan2 | panpan1.1 |
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ADIG (Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
CanFam3.1 | 24 | 27,034,578 - 27,042,180 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 26,680,064 - 26,687,313 (+) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 27,730,762 - 27,738,020 (+) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 27,730,833 - 27,734,980 (+) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 24 | 27,004,498 - 27,011,740 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 27,112,807 - 27,120,063 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 27,600,848 - 27,608,107 (+) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
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Adig (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024408640 | 175,947,396 - 175,953,524 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 2,798,158 - 2,801,985 (-) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 2,797,758 - 2,802,042 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ADIG (Sus scrofa - pig) |
| Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
Sscrofa11.1 Ensembl | 17 | 41,609,269 - 41,612,711 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 41,609,367 - 41,631,142 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 47,080,560 - 47,117,841 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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ADIG (Chlorocebus sabaeus - green monkey) |
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Adig (Heterocephalus glaber - naked mole-rat) |
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Adig (Rattus rattus - black rat) |
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