Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ikzf4 | Rat | encephalomyelitis | | ISS | Ikzf4 (Mus musculus) | 13592920 | | MouseDO | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Imported Disease Annotations - MGIObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Ikzf4 | Rat | encephalomyelitis | | ISS | Ikzf4 (Mus musculus) | 13592920 | | MouseDO | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| # | Reference Title | Reference Citation |
| 1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
| 2. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 3. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
| Ikzf4 (Rattus norvegicus - Norway rat) |
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| IKZF4 (Homo sapiens - human) |
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| Ikzf4 (Mus musculus - house mouse) |
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| Ikzf4 (Chinchilla lanigera - long-tailed chinchilla) |
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| IKZF4 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| IKZF4 (Canis lupus familiaris - dog) |
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| Ikzf4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| IKZF4 (Sus scrofa - pig) |
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| IKZF4 (Chlorocebus sabaeus - green monkey) |
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| Ikzf4 (Heterocephalus glaber - naked mole-rat) |
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| Ikzf4 (Rattus rattus - black rat) |
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Variants in Ikzf4
411 total Variants
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| The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
| D12S1632 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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musculoskeletal system
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nervous system
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renal system
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reproductive system
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respiratory system
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sensory system
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visual system
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16 | 10 | 75 | 169 | 90 | 89 | 58 | 93 | 58 | 6 | 380 | 204 | 15 | 148 | 96 | 108 | 31 | 23 | 23 |
| RefSeq Transcripts | NM_001427287 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| XM_003754258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_006225914 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595140 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595141 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595142 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595143 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017595144 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603356 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603357 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603358 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603359 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| XM_017603360 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AC098012 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AC128207 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| JAXUCZ010000007 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| Ensembl Acc Id: | ENSRNOT00000019738 ⟹ ENSRNOP00000019738 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000119994 ⟹ ENSRNOP00000079721 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000120270 ⟹ ENSRNOP00000097096 | ||||||||||||
| Type: | CODING | ||||||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000127419 ⟹ ENSRNOP00000103664 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000132684 ⟹ ENSRNOP00000111502 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000132841 ⟹ ENSRNOP00000103095 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Ensembl Acc Id: | ENSRNOT00000152474 ⟹ ENSRNOP00000104790 | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | NM_001427287 ⟹ NP_001414216 | ||||||||
| RefSeq Status: | VALIDATED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | XM_017595142 ⟹ XP_017450631 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| Sequence: |
| RefSeq Acc Id: | XM_017595144 ⟹ XP_017450633 | ||||||||||||||||
| Type: | CODING | ||||||||||||||||
| Position: |
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| Sequence: |
| Protein RefSeqs | NP_001414216 | (Get FASTA) | NCBI Sequence Viewer |
| XP_017450631 | (Get FASTA) | NCBI Sequence Viewer | |
| XP_017450633 | (Get FASTA) | NCBI Sequence Viewer | |
| Ensembl Protein | ENSRNOP00000019738.8 | ||
| ENSRNOP00000079721 | |||
| ENSRNOP00000079721.1 | |||
| ENSRNOP00000097096 | |||
| ENSRNOP00000097096.1 | |||
| ENSRNOP00000103095.1 | |||
| ENSRNOP00000103664.1 | |||
| ENSRNOP00000104790.1 | |||
| ENSRNOP00000111502.1 |
| RefSeq Acc Id: | XP_017450631 ⟸ XM_017595142 |
| - Peptide Label: | isoform X1 |
| - UniProtKB: | A0A8I5ZN67 (UniProtKB/TrEMBL), A6KSG2 (UniProtKB/TrEMBL) |
| - Sequence: |
| RefSeq Acc Id: | XP_017450633 ⟸ XM_017595144 |
| - Peptide Label: | isoform X2 |
| - UniProtKB: | A6KSG2 (UniProtKB/TrEMBL) |
| - Sequence: |
| Ensembl Acc Id: | ENSRNOP00000019738 ⟸ ENSRNOT00000019738 |
| Ensembl Acc Id: | ENSRNOP00000097096 ⟸ ENSRNOT00000120270 |
| Ensembl Acc Id: | ENSRNOP00000079721 ⟸ ENSRNOT00000119994 |
| RefSeq Acc Id: | NP_001414216 ⟸ NM_001427287 |
| - UniProtKB: | A0A8I6AS15 (UniProtKB/TrEMBL), A6KSG1 (UniProtKB/TrEMBL) |
| Ensembl Acc Id: | ENSRNOP00000111502 ⟸ ENSRNOT00000132684 |
| Ensembl Acc Id: | ENSRNOP00000104790 ⟸ ENSRNOT00000152474 |
| Ensembl Acc Id: | ENSRNOP00000103095 ⟸ ENSRNOT00000132841 |
| Ensembl Acc Id: | ENSRNOP00000103664 ⟸ ENSRNOT00000127419 |
| Name | Modeler | Protein Id | AA Range | Protein Structure |
| AF-D4A636-F1-model_v2 | AlphaFold | D4A636 | 1-586 | view protein structure |
| eQTL | View at Phenogen | |
| WGCNA | View at Phenogen | |
| Tissue/Strain Expression | View at Phenogen |
| Database | Acc Id | Source(s) |
| AGR Gene | RGD:2319157 | AgrOrtholog |
| BioCyc Gene | G2FUF-35346 | BioCyc |
| Ensembl Genes | ENSRNOG00000005535 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
| Ensembl Transcript | ENSRNOT00000019738.8 | UniProtKB/TrEMBL |
| ENSRNOT00000119994 | ENTREZGENE | |
| ENSRNOT00000119994.2 | UniProtKB/TrEMBL | |
| ENSRNOT00000120270 | ENTREZGENE | |
| ENSRNOT00000120270.2 | UniProtKB/TrEMBL | |
| ENSRNOT00000127419.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000132684.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000132841.1 | UniProtKB/TrEMBL | |
| ENSRNOT00000152474.1 | UniProtKB/TrEMBL | |
| Gene3D-CATH | 3.30.1740.20 | UniProtKB/TrEMBL |
| Classic Zinc Finger | UniProtKB/TrEMBL | |
| InterPro | Ikaros_C2H2-ZF | UniProtKB/TrEMBL |
| Ribosomal_eS26_CS | UniProtKB/TrEMBL | |
| Ribosomal_S26e | UniProtKB/TrEMBL | |
| Ribosomal_S26e_sf | UniProtKB/TrEMBL | |
| Znf_C2H2/integrase_DNA-bd | UniProtKB/TrEMBL | |
| Znf_C2H2_sf | UniProtKB/TrEMBL | |
| NCBI Gene | 100361923 | ENTREZGENE |
| PANTHER | 40S RIBOSOMAL PROTEIN S26 | UniProtKB/TrEMBL |
| 40S RIBOSOMAL PROTEIN S26-RELATED | UniProtKB/TrEMBL | |
| ZINC FINGER PROTEIN | UniProtKB/TrEMBL | |
| ZINC FINGER PROTEIN EOS | UniProtKB/TrEMBL | |
| Pfam | Ribosomal_S26e | UniProtKB/TrEMBL |
| zf-C2H2 | UniProtKB/TrEMBL | |
| PhenoGen | Ikzf4 | PhenoGen |
| PROSITE | RIBOSOMAL_S26E | UniProtKB/TrEMBL |
| ZINC_FINGER_C2H2_1 | UniProtKB/TrEMBL | |
| ZINC_FINGER_C2H2_2 | UniProtKB/TrEMBL | |
| RatGTEx | ENSRNOG00000005535 | RatGTEx |
| SMART | ZnF_C2H2 | UniProtKB/TrEMBL |
| Superfamily-SCOP | SSF57667 | UniProtKB/TrEMBL |
| UniProt | A0A8I5ZN67 | ENTREZGENE, UniProtKB/TrEMBL |
| A0A8I6AS15 | ENTREZGENE, UniProtKB/TrEMBL | |
| A0ABK0L2M1_RAT | UniProtKB/TrEMBL | |
| A0ABK0L3B8_RAT | UniProtKB/TrEMBL | |
| A0ABK0LVN0_RAT | UniProtKB/TrEMBL | |
| A0ABK0M9F4_RAT | UniProtKB/TrEMBL | |
| A6KSG1 | ENTREZGENE, UniProtKB/TrEMBL | |
| A6KSG2 | ENTREZGENE, UniProtKB/TrEMBL | |
| D4A636_RAT | UniProtKB/TrEMBL |
| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2012-08-24 | Ikzf4 | IKAROS family zinc finger 4 | LOC100361923 | zinc finger protein, subfamily 1A, 4 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
| 2010-05-05 | LOC100361923 | zinc finger protein, subfamily 1A, 4 | Symbol and Name status set to provisional | 70820 | PROVISIONAL |