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Gene: C8h11orf87 (similar to human chromosome 11 open reading frame 87) Rattus norvegicus

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Symbol:

C8h11orf87

Name:

similar to human chromosome 11 open reading frame 87

RGD ID:

1642426

Description:

Predicted to be located in membrane. Orthologous to human C11orf87 (chromosome 11 open reading frame 87); INTERACTS WITH alpha-Zearalanol; perfluorooctanoic acid; 2,2',4,4'-Tetrabromodiphenyl ether (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

hypothetical protein LOC100125362; LOC100125362; MGC109299; uncharacterized protein C11orf87 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	C11orf87 (chromosome 11 open reading frame 87)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	AI593442 (expressed sequence AI593442)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	CUNH11orf87 (chromosome unknown C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	C9H11orf87 (chromosome 9 C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	C5H11orf87 (chromosome 5 C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	CUNH11orf87 (chromosome unknown C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	C9H11orf87 (chromosome 9 C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	C1H11orf87 (chromosome 1 C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	CUNH11orf87 (chromosome unknown C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	C8H11orf87 (chromosome 8 C11orf87 homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	C11orf87 (chromosome 11 open reading frame 87)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	AI593442 (expressed sequence AI593442)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-35i13.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-35i13.1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-183i3.9	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	c11orf87	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	61,958,626 - 61,966,119 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	61,957,676 - 61,968,365 (-)	Ensembl				GRCr8
mRatBN7.2	8	53,062,361 - 53,069,882 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	53,062,360 - 53,069,538 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	58,599,366 - 58,606,012 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	56,878,375 - 56,885,021 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	54,742,586 - 54,749,232 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	57,248,620 - 57,255,599 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	57,248,620 - 57,255,263 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	55,822,041 - 55,828,684 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	56,098,448 - 56,105,092 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	52,568,983 - 52,575,602 (-)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

actinomycin D (ISO)

alpha-Zearalanol (EXP)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

chromium(6+) (ISO)

cisplatin (ISO)

diarsenic trioxide (ISO)

dorsomorphin (ISO)

entinostat (ISO)

lead(0) (ISO)

Nutlin-3 (ISO)

perfluorooctanoic acid (EXP)

propanal (ISO)

resveratrol (ISO)

SB 431542 (ISO)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

membrane (IEA)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15632090

Genomics

Comparative Map Data

C8h11orf87
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	61,958,626 - 61,966,119 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	61,957,676 - 61,968,365 (-)	Ensembl				GRCr8
mRatBN7.2	8	53,062,361 - 53,069,882 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	53,062,360 - 53,069,538 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	58,599,366 - 58,606,012 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	56,878,375 - 56,885,021 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	54,742,586 - 54,749,232 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	57,248,620 - 57,255,599 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	57,248,620 - 57,255,263 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	55,822,041 - 55,828,684 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	56,098,448 - 56,105,092 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	52,568,983 - 52,575,602 (-)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

C11orf87
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	109,422,190 - 109,429,167 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	109,422,190 - 109,429,167 (+)	Ensembl			hg38	GRCh38
GRCh37	11	109,292,916 - 109,299,893 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	108,798,085 - 108,801,533 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	11	106,447,057 - 106,454,104 (+)	NCBI		Celera
Cytogenetic Map	11	q22.3	NCBI
HuRef	11	105,218,064 - 105,225,090 (+)	NCBI		HuRef
CHM1_1	11	109,175,820 - 109,182,869 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	109,432,359 - 109,439,336 (+)	NCBI		T2T-CHM13v2.0

AI593442
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	52,584,332 - 52,593,434 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	52,584,342 - 52,591,080 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	52,673,032 - 52,682,134 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	52,673,042 - 52,679,780 (-)	Ensembl			mm10	GRCm38
MGSCv37	9	52,481,147 - 52,487,534 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	52,436,805 - 52,441,832 (-)	NCBI		MGSCv36	mm8
Celera	9	49,941,601 - 49,947,986 (-)	NCBI		Celera
Cytogenetic Map	9	A5.3	NCBI
cM Map	9	29.12	NCBI

CUNH11orf87
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	11,448,134 - 11,455,153 (+)	Ensembl
ChiLan1.0	NW_004955412	11,447,935 - 11,455,153 (+)	NCBI	ChiLan1.0	ChiLan1.0

C9H11orf87
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	110,167,276 - 110,174,318 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	111,260,362 - 111,267,385 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	104,308,303 - 104,315,320 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	107,775,512 - 107,779,062 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	107,776,999 - 107,777,592 (+)	Ensembl			panPan2	panpan1.1

C5H11orf87
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	23,283,434 - 23,291,376 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	23,288,441 - 23,289,768 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	23,204,053 - 23,211,407 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	23,310,761 - 23,318,076 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	23,314,920 - 23,317,163 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	23,367,949 - 23,375,289 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	23,268,100 - 23,275,445 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	23,319,295 - 23,326,587 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH11orf87
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	92,053,270 - 92,060,285 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936612	4,648,726 - 4,652,329 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936612	4,645,324 - 4,652,361 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C9H11orf87
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	37,613,308 - 37,620,660 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	9	37,297,438 - 37,939,922 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	42,086,774 - 42,089,450 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C1H11orf87
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	100,839,147 - 100,846,115 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	100,840,648 - 100,841,241 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666043	25,115,272 - 25,121,875 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

CUNH11orf87
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	4,327,238 - 4,334,209 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624784	4,327,180 - 4,334,238 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

C8H11orf87
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	46,667,988 - 46,675,577 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in C8h11orf87
80 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	984
Count of miRNA genes:	328
Interacting mature miRNAs:	463
Transcripts:	ENSRNOT00000028972
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313057	Bss76	Bone structure and strength QTL 76	3	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	8	39106258	91341052	Rat
1298065	Scl16	Serum cholesterol level QTL 16	3.8		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39752803	84752803	Rat
1549908	Neudeg1	Neurodegradation QTL 1	5.5	0	nervous system integrity trait (VT:0010566)	logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)	8	58337123	103337123	Rat
2317030	Wbc5	White blood cell count QTL 5	3.21	0.005	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	8	16994642	61994642	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	49849908	118871671	Rat
2313067	Bss77	Bone structure and strength QTL 77	3.1	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	8	39106258	91341052	Rat
1578769	Uae31	Urinary albumin excretion QTL 31	3.3	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	39106363	103375781	Rat
1298079	Activ2	Activity QTL 2	9.5	0.000001	voluntary movement trait (VT:0003491)	rearing measurement (CMO:0001515)	8	50763951	95763951	Rat
11556286	Cm81	Cardiac mass QTL 81		0.01	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	39106258	84106258	Rat
70161	Bp62	Blood pressure QTL 62	2.9	0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	51589699	99045312	Rat
1358912	Bw51	Body weight QTL 51	2.95		body mass (VT:0001259)	body weight (CMO:0000012)	8	60248093	105248093	Rat
1578765	Klgr1	Kidney lesion grade QTL 1	3.3	0.0001	kidney morphology trait (VT:0002135)	organ lesion measurement (CMO:0000677)	8	39106363	103375781	Rat
2317051	Aia18	Adjuvant induced arthritis QTL 18	2.42		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	8	16994642	61994642	Rat
61464	Niddm11	Non-insulin dependent diabetes mellitus QTL 11	3.1	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	8	44477926	89477926	Rat
4889938	Bss89	Bone structure and strength QTL 89	3.8		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	8	58991697	91341052	Rat
1578755	Pur5	Proteinuria QTL 5	3.3	0.0001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	8	39106258	103375958	Rat
2313086	Bss60	Bone structure and strength QTL 60	4.1	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	8	58991697	91341052	Rat
2313088	Bss75	Bone structure and strength QTL 75	3.1	0.0001	body length (VT:0001256)	body length, nose to rump (CMO:0000079)	8	39106258	91341052	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
1358896	Bp262	Blood pressure QTL 262	2.89		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	35464071	107982864	Rat
731182	Uae24	Urinary albumin excretion QTL 24	6.4		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	8	47541419	92541419	Rat
631648	Stl5	Serum triglyceride level QTL 5	4	0.0003	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	35464071	71842899	Rat
61353	Bp35	Blood pressure QTL 35		0.001	arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	8	39106258	84106258	Rat
1331837	Bw23	Body weight QTL 23	4.19	0.00007	body mass (VT:0001259)	body weight (CMO:0000012)	8	55428416	107963099	Rat
631842	Inf1	Infertility severity QTL 1	4.1	0.001	seminal gland mass (VT:0010524)	seminal vesicle wet weight (CMO:0001603)	8	31543661	76543661	Rat
737824	Hcar10	Hepatocarcinoma resistance QTL 10	2.9		liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	8	49610204	68373388	Rat
1359033	Bp273	Blood pressure QTL 273			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	84106258	Rat
1331769	Rf39	Renal function QTL 39	3.871		urine output (VT:0003620)	timed urine volume (CMO:0000260)	8	50763951	107970527	Rat
61358	Bp39	Blood pressure QTL 39	2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	44447837	89447837	Rat
1358906	Bp253	Blood pressure QTL 253	4	0.0004	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	49610204	94610204	Rat
1358907	Cm40	Cardiac mass QTL 40	1.89		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	8	35464071	107982864	Rat
1598824	Memor4	Memory QTL 4	2.5		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	8	17993862	62252873	Rat
1331744	Bp217	Blood pressure QTL 217	3.398		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	39106258	67378345	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
2313046	Bss78	Bone structure and strength QTL 78	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	8	39106258	91341052	Rat
2316950	Scl66	Serum cholesterol level QTL 66	4.1		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	8	39106363	114525825	Rat
1582254	Kidm31	Kidney mass QTL 31	3		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	8	49245178	94245178	Rat
724540	Uae8	Urinary albumin excretion QTL 8	5		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	8	39106258	103375958	Rat
1358892	Kidm26	Kidney mass QTL 26	3.69		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	8	35464071	107982864	Rat
631216	Stl9	Serum triglyceride level QTL 9	4.71	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	8	50763951	67219641	Rat
1582243	Bw66	Body weight QTL 66	3.4	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	8	49245178	94245178	Rat
5684973	Bss100	Bone structure and strength QTL 100	4.7		tibia area (VT:1000281)	tibia area measurement (CMO:0001382)	8	58991697	91341052	Rat
61373	Mcs4	Mammary carcinoma susceptibility QTL 4	1.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	8	44475043	89475043	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	5	44	142	43	42	20	9	20	5	160	72	6	121	47	64	22	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001103354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006243064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766199	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017595396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC092621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000028972 ⟹ ENSRNOP00000062036

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	61,957,676 - 61,968,365 (-)	Ensembl
mRatBN7.2 Ensembl	8	53,062,360 - 53,069,538 (-)	Ensembl
Rnor_6.0 Ensembl	8	57,248,620 - 57,255,263 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114873 ⟹ ENSRNOP00000094101

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	61,957,676 - 61,968,365 (-)	Ensembl
mRatBN7.2 Ensembl	8	53,062,360 - 53,068,432 (-)	Ensembl

RefSeq Acc Id:

NM_001103354 ⟹ NP_001096824

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	61,958,626 - 61,965,272 (-)	NCBI
mRatBN7.2	8	53,062,366 - 53,069,012 (-)	NCBI
Rnor_6.0	8	57,248,620 - 57,255,263 (-)	NCBI
Rnor_5.0	8	55,822,041 - 55,828,684 (-)	NCBI
RGSC_v3.4	8	56,098,448 - 56,105,092 (-)	RGD
Celera	8	52,568,983 - 52,575,602 (-)	RGD

Sequence:

show sequence

GGCGGCGGCGGCGGCGGCGAGGGCGGCAGCAGCAGCGCGGCTCTGTCTCTGGTCCCAGCGCTCC
GTGCTTTCTGCAGCCGCCACTGCAGCCAAGGCGGGGGCTTCTTCTCTGCAACTGGCTGGCCCTT
CCAGCACTGTGCCTGGGGAAAGGAAACAAGATCAAAGAAGATCGGAGACAATCTCCCTGGGGCC
ACTAGCTCCCGCCCGCTTGCTTGTGGGCAGTTGGTCCTTCAGTCTTTGGCTGGAGCGCTCACTC
CCTCCAGCGCTTAGAGAGCAGTTGGGGTGGCGTGGGCTCTTGTCCTCATCTTGGTTGGTGGGAA
CCGTGTGTTCAACAGAGGAAGCCTGGTGGGCCTGGCCCCTCTCAGCCCAGCGCCGATGAGTGCC
AGGGCGCCGAAAGAGCTGAGGCTGGCCCTGCCGCCTTGTCTCCTGAACCGGACCTTTGCTTCCC
ACAACGCCAGTGGAGGCAGCAACGCAGGTATCCGCAGCTCAGGCGCAGGTGGTGGCACCTGCAT
CACGCAGGTGGGACAGCAGCTCTTCCAGTCTTTTTCATCCACGCTGGTGCTGATTGTCCTGGTC
ACTCTCATCTTCTGTCTCATCGTGCTGTCCCTCTCCACTTTCCACATCCACAAGCGTAGGATGA
AGAAGCGGAAGATGCAGAGGGCTCAGGAAGAATACGAGAGAGATCACTGCAGCGGCAGCCACGG
TGGTGGGGGGCTGCCTCGAGCAGGTGTTCAAGCCCCAACCCACGGAAAAGAAACCCGGCTGGAG
AGGCAGCCCCGGGACTCCGCCTTCTGCACCCCTTCCAATGCTACTTCTTCTTCCTCCTCATCCC
CTGGTCTCCTGTGCCAGGGTCCCTGTGCACCTCCGCCTCCACCGCCAGTCCCAAGTCCACACGG
AGCACACGCAGCTTCCTCCTGCTTGGACACACCGGGCGAGGGCCTTTTGCAAACGGTGGTACTG
TCCTGATTGTGCAGCCCCTCTCCTGACCCTTTCCTCATTCCAGCATCTTTACCGTCCTCGCTTT
TGTTCTTGCTTTCTTCCTTTTCCGTTCTCCTTTGACCCCCGTTTTCTCTGCCCTCTTTCCTTAC
CTGGCCACCCTTTCACTGTCTCTCCTCCGCCGAGGCACTGTGCGGTATTTGTAAATATTGGGCG
AGGAAAGTCTCAGAGGAAGAAATAACACTGATAAATACTTTATTGATATTTATAGTAATTATTA
TACTATTAATAACACAGTCCAAGCGCATGACAAATCACATAATTTCTCATTGTCAATGAAGGCT
GCATCTTCCCTCTCCACCCCGTGCCCCCCTCAGTAAAGAGGAGAAACCGCACAAGCTACCAAAT
ATCTAAAAGACATTGACACCTAAGCAAAGGATGGGAGGGGACCGGGGTGTTGTATATAGCTGTC
AAGTGAAAGTTTAGTCACCTTTTTGCCCCTCCCTCACGGGCTTTCTCTTTTCCTTTAGCTTGTC
TCCCTCCCCTTTCCTCACCTTCAGCTGGGCTCAGGCAATAGTATATTATAAAGGGAACATCTAC
AGAAAGCACCAGAGACCACATAGAAGGTCCCAGAAAAACGTTTAGGACAGGTAACCCCTCTCCA
GTCAGTCATCCTCTCACTTTTTGGTGTCCTCCTCGGGCAGAATTTGAGTTTACTTTTAGAAATT
ATCTCTCGCTGGCCGAGCGCAGAAAACAAAAACCATACTATCTGCTTTTGCTACCCGTTAGGCC
CCACTTGCACACTTGACTGGTGGTCATTTTGTTCTGTTCTGGTTTTTGGTTTTGGGGGGAGTGT
CTTTTTGGTTTTGTTTTGGACCTCAGAGAATCGGGAGCTGTCCAGCCAGGTCTGGTGCTGAATA
TGTCTCATCTTCATGGTTACTTCCTCTGGTTGTGCAGACCAAAGAAGGAGCTGTTTTGGAAAGT
GATCGTCTTGGTTTTGATTGGTTTCTTTCTTCTTCTTTTCTACAATTGGATTAGCGTGTGCTAT
TGTTTTTCTTATCATTATACATTATACATTGTATAAGTTACCTTTATGTGAAAAAAAAAAGTAT
TAGGTAATGTGCAGTTTTGAAAATGCAGTATCTAACCAGCCACTATGTTTCTGTTTTATTTTTA
GAACAAGTGCACCTTTGTTATATATTATTATATCGGTACCAAATACAGAAGAAAACTATAGCTC
TGTGATATAGCCTCCAAACTGTATATTCTTGTTCTGACTTTCCAGCTGTTGATAGAATGGTTGC
CACTGGCTGAGGAAGTCAGTGGTTCAGGCCTGCCTGGCTTCTGCTGTTTCCGGAAGTGTTCTTT
TGTATTTTACTCTGTAGTAGACTATTATAAAATGATGACACCCGTGTTTCCCCCTTTTCTTTTG
TGAATCACAGAAACAACCACAACAGAAAACAAATAATGGATGTGCTGGGACGCCATCTATTAAA
AACATGGTTAATCTTTAAACAGTGCCTGTGGTCCTCTGCATGCAGTTGCCACCTGGAGGCAGTG
CCGTGTGTGCTTGTACTGTATGCATTTGGGGGGAAAGACTGGTGGAGATGTTGGGCAATTTGGA
TGACAGGACATAACAACTTCTAAGTTAAATCCATAGATGCTTACAGGATAAAACTGTTTATAGC
TTGCTTAGTTATGACTCTGTGCCTGCATCCGATAGACGGGGAAATCTTCCTTCTTCCCAAGTCT
GGCCTAATTAACCACCCCGAACACCTAGAGAATGTTGAGGAAAAAGGAAAGCATGAGAGAAGAT
AAATCTCTTTTGTCCTCTCTTTAAATGTCAGATAAGTCCATCTATGTGACACTTTGCTGCTTGG
CTAAGGCAGTGGGACCCCACATATCCCTCTCCCAAGCCACTAGCTGCCCTCTCCGCTGTGTCTT
GTTCCAAGTTGTATGGGCTTAATATTCCGAGCAATTATTGCCTCTAATGTTTTTGGTTATATAT
AAAGTTTTCCAAGCTCAGTCTGTCTCTTTATAAAATAATTTAATAAGGTTGATTTAGTCACCCA
TAGATATCATCTAAGTCCTTTTATGAAGCACAGAAGATCTTCATTTAAGCATGCTATGTGTATC
GTTAGGAAGACCAGGTATAATCTTTGGATACAATTATTAAACAATGAACCAGATTCTCTCCAGT
GCCTTAGTCACTTCCTAGTAACAGGTCAGAGTGCATTCACTCCCTTGGGCCATCAAGGAAGCTG
TTAGTGTATCGGAGCTCTACACTGTACAACAGAATGGCTAAGGCACTGTGAAGGAGACTGTCCA
CTAAATCTCTTTAACTTGCCCTCATCCAACTGTAGTTCTTAATACCTTCTTCCAGAATGCGTTT
TGGATGTGAAATCTGAATAGGATCAGGAACCCAGAAGGAAGGTTCATCATTTCAAATGAACTCT
ACTTAAGTGCATAGATATTACTTTCTTCCCATTATTTGGTGCACTCTTTTTACAGTAAATAAGT
TCCCATTTTATTAAAGCAATAAGATATTATGTTTTGAGCAGTGCTAGATGCTGATTCCACTTCC
TTGGTGCTGAAGCGACTCATGTGTTCCTGCCTTATGAATCAGTGCATTCAAGGCATGCAATAAT
AATCCCCTTCCAAGAAGCAGACTGTACACCCTGGAGGGCAATGTCCTACATACCTTTTTTTCCC
AGAAGGAATAGAGTGAACTAAGAAATAAACTAATTATGTGTATTTAAAAAAAACATCTTGATAC
CTCTAACCATAAGCACACATCTGTAATGTGCTATTATTGTGCACCTTTAAATGTATATGCCTTT
TCCCCATCCATTAACTAGGGTTTAATATTTTAATAGTGTCCAGTGTAAAGAGGATGCAGCTCGT
CAATCACATTTCATACTGAGTTTAATATGCTGTGAACCTGGTGGCATCACACAAGATTTCTGTG
AGCTAGAATGAGAATTACATGAAATTCTTGTAGGCCAGATCCCACACCAAATTATTGTAGTAAG
CATACGGCAACGCAGATTTCTATAGAGTCTGCTTAGACTGCTGCTTAGAGAGCTTAACTGACCC
ATACGACATTCGAGGTTTCATTTTTATGAGACAAAAGGCAATATGAAAAATAGCTAAATTTACT
CTAAGGATTTTATTTACTGCTGTCCCGTCAAACTAATTGCTCCAACCCTCTATAGCTACAGCTC
GGTTCCCGCACTTGCTATTCAGTATTAATAAGGTAGCATGCTTGATTCTTACTGTTTTAAAAAT
GAGAAAAAATAGAGAGAGAATGCCAATATGTCAACTGTACGGGACTCTGACTCTTGAAGATGAA
GATGGATATAATCTTTAGAATTTATATACACCCATAGATATGTATTTATATATGCATACATTTT
GTACAAATTTACAACGGACTTTTTGTATTCTCTTTTCTGTCATTATGAGTATGAGACTGAAACC
AAATAGTTGCTCCATCCTCTGATCCAGAGAGGATCCGAGGAGTCAGGCGTATGCATGCACTTGG
TTCTCTGAGGTCAAATCGGAATGGCTTTCTCTTTATTTAGTGGAAGGGGAGAGTCTTCCTTGGC
TTGGGGAATTGGTAATTAGATAAGCTTCCTTTCCTCTATTAGTGACTCAAATGTAGCAATGATA
ATGAAGTCATGACCATCTCTATGTGGTCCAGCTATTTGGATGGATCAGAAATCTATCTATCTAT
CTACAAGAGCATTGGAGCCATCTTGACCACAATCATGGATTTCAATTCGATTTTTCCTTTTCCC
TTTCAACTTATACGTTGTATGAGATACAACATATACCTGCATATGTAAAGGTAAAATGAAACTA
TAACTATTATTTGTTTAGTTTGACAAGTAGCGTTTTGGAAAACATGGACAAGTTAGCTTTAAAA
ATTACTGGGCATTTGACTTTTTAACCCTTCCTGTCTGTAGCCATTGAATTGATTAGATACTTAC
TAAAATTTCTTTTTCCAATGCATAGGCATAGGTTTTAAGTGCTTTATGTGGAAAATTGCTGAGA
AATTACTAACTGATATTATCTGAGAGTTATGGGCTAAATTGGAACCAGAAACTTTAACATGGCT
TCTAAAGTCTACTCCCAGGAGTACCTAGGCTTTGGACTGGAATCTGAAAAGCCACTTATTCATG
TTTGGACGTTGCGGTGTGGTTCACAGATGTTCATGCAAAAATGAGTTGCCCCATCTACACAGAA
AGGTATTTCATCACTGGGATGAATATAAATCTGATTCTGGTTAGTCTTTTTTCCTTATTTGATA
ACATCTGAGAAGCAGATGTTATGACTTGACATCAATACTTATCAATGCCACCAACCCAATGACA
TGATTGGTGCGGTGTAGGAATGCTTAGTGGAGAATAAGAACTTACTTAGCTTTAACTGAGAGAC
AGTGCATTATTTGGGTTGCTTTACCCATTTGAGGCAAGATATTTCATTGAGACTTGTGGTCTCA
CAGGATTGCTGCTACAGAGAGGTTAACGACAGTGTCGGCATCAACAGAAAAAGGTGATTTTTGA
ACTCTAGTATATCCAATAGATAGAATAAAACAGGTATTAGAAATTCATGAAAAATTTGTTTTGC
TTTTATATCAATAAAAGAGTTTTCTTGTTAA

hide sequence

RefSeq Acc Id:

XM_006243064 ⟹ XP_006243126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	61,958,626 - 61,964,676 (-)	NCBI
mRatBN7.2	8	53,062,361 - 53,068,385 (-)	NCBI
Rnor_6.0	8	57,248,620 - 57,254,322 (-)	NCBI
Rnor_5.0	8	55,822,041 - 55,828,684 (-)	NCBI

Sequence:

show sequence

TTCTCTGCTGAGTAACCAGTGTCTCCGCGGTGCTGTACGGGCGCCAGACCCCATCTGAGCCAGC
GGAGCAGCTGGCAGCGGTCCTGCGCTGTCAGGAGCGCACTGTGCCTGGGGAAAGGAAACAAGAT
CAAAGAAGATCGGAGACAATCTCCCTGGGGCCACTAGCTCCCGCCCGCTTGCTTGTGGGCAGTT
GGTCCTTCAGTCTTTGGCTGGAGCGCTCACTCCCTCCAGCGCTTAGAGAGCAGTTGGGGTGGCG
TGGGCTCTTGTCCTCATCTTGGTTGGTGGGAACCGTGTGTTCAACAGAGGAAGCCTGGTGGGCC
TGGCCCCTCTCAGCCCAGCGCCGATGAGTGCCAGGGCGCCGAAAGAGCTGAGGCTGGCCCTGCC
GCCTTGTCTCCTGAACCGGACCTTTGCTTCCCACAACGCCAGTGGAGGCAGCAACGCAGGTATC
CGCAGCTCAGGCGCAGGTGGTGGCACCTGCATCACGCAGGTGGGACAGCAGCTCTTCCAGTCTT
TTTCATCCACGCTGGTGCTGATTGTCCTGGTCACTCTCATCTTCTGTCTCATCGTGCTGTCCCT
CTCCACTTTCCACATCCACAAGCGTAGGATGAAGAAGCGGAAGATGCAGAGGGCTCAGGAAGAA
TACGAGAGAGATCACTGCAGCGGCAGCCACGGTGGTGGGGGGCTGCCTCGAGCAGGTGTTCAAG
CCCCAACCCACGGAAAAGAAACCCGGCTGGAGAGGCAGCCCCGGGACTCCGCCTTCTGCACCCC
TTCCAATGCTACTTCTTCTTCCTCCTCATCCCCTGGTCTCCTGTGCCAGGGTCCCTGTGCACCT
CCGCCTCCACCGCCAGTCCCAAGTCCACACGGAGCACACGCAGCTTCCTCCTGCTTGGACACAC
CGGGCGAGGGCCTTTTGCAAACGGTGGTACTGTCCTGATTGTGCAGCCCCTCTCCTGACCCTTT
CCTCATTCCAGCATCTTTACCGTCCTCGCTTTTGTTCTTGCTTTCTTCCTTTTCCGTTCTCCTT
TGACCCCCGTTTTCTCTGCCCTCTTTCCTTACCTGGCCACCCTTTCACTGTCTCTCCTCCGCCG
AGGCACTGTGCGGTATTTGTAAATATTGGGCGAGGAAAGTCTCAGAGGAAGAAATAACACTGAT
AAATACTTTATTGATATTTATAGTAATTATTATACTATTAATAACACAGTCCAAGCGCATGACA
AATCACATAATTTCTCATTGTCAATGAAGGCTGCATCTTCCCTCTCCACCCCGTGCCCCCCTCA
GTAAAGAGGAGAAACCGCACAAGCTACCAAATATCTAAAAGACATTGACACCTAAGCAAAGGAT
GGGAGGGGACCGGGGTGTTGTATATAGCTGTCAAGTGAAAGTTTAGTCACCTTTTTGCCCCTCC
CTCACGGGCTTTCTCTTTTCCTTTAGCTTGTCTCCCTCCCCTTTCCTCACCTTCAGCTGGGCTC
AGGCAATAGTATATTATAAAGGGAACATCTACAGAAAGCACCAGAGACCACATAGAAGGTCCCA
GAAAAACGTTTAGGACAGGTAACCCCTCTCCAGTCAGTCATCCTCTCACTTTTTGGTGTCCTCC
TCGGGCAGAATTTGAGTTTACTTTTAGAAATTATCTCTCGCTGGCCGAGCGCAGAAAACAAAAA
CCATACTATCTGCTTTTGCTACCCGTTAGGCCCCACTTGCACACTTGACTGGTGGTCATTTTGT
TCTGTTCTGGTTTTTGGTTTTGGGGGGAGTGTCTTTTTGGTTTTGTTTTGGACCTCAGAGAATC
GGGAGCTGTCCAGCCAGGTCTGGTGCTGAATATGTCTCATCTTCATGGTTACTTCCTCTGGTTG
TGCAGACCAAAGAAGGAGCTGTTTTGGAAAGTGATCGTCTTGGTTTTGATTGGTTTCTTTCTTC
TTCTTTTCTACAATTGGATTAGCGTGTGCTATTGTTTTTCTTATCATTATACATTATACATTGT
ATAAGTTACCTTTATGTGAAAAAAAAAAGTATTAGGTAATGTGCAGTTTTGAAAATGCAGTATC
TAACCAGCCACTATGTTTCTGTTTTATTTTTAGAACAAGTGCACCTTTGTTATATATTATTATA
TCGGTACCAAATACAGAAGAAAACTATAGCTCTGTGATATAGCCTCCAAACTGTATATTCTTGT
TCTGACTTTCCAGCTGTTGATAGAATGGTTGCCACTGGCTGAGGAAGTCAGTGGTTCAGGCCTG
CCTGGCTTCTGCTGTTTCCGGAAGTGTTCTTTTGTATTTTACTCTGTAGTAGACTATTATAAAA
TGATGACACCCGTGTTTCCCCCTTTTCTTTTGTGAATCACAGAAACAACCACAACAGAAAACAA
ATAATGGATGTGCTGGGACGCCATCTATTAAAAACATGGTTAATCTTTAAACAGTGCCTGTGGT
CCTCTGCATGCAGTTGCCACCTGGAGGCAGTGCCGTGTGTGCTTGTACTGTATGCATTTGGGGG
GAAAGACTGGTGGAGATGTTGGGCAATTTGGATGACAGGACATAACAACTTCTAAGTTAAATCC
ATAGATGCTTACAGGATAAAACTGTTTATAGCTTGCTTAGTTATGACTCTGTGCCTGCATCCGA
TAGACGGGGAAATCTTCCTTCTTCCCAAGTCTGGCCTAATTAACCACCCCGAACACCTAGAGAA
TGTTGAGGAAAAAGGAAAGCATGAGAGAAGATAAATCTCTTTTGTCCTCTCTTTAAATGTCAGA
TAAGTCCATCTATGTGACACTTTGCTGCTTGGCTAAGGCAGTGGGACCCCACATATCCCTCTCC
CAAGCCACTAGCTGCCCTCTCCGCTGTGTCTTGTTCCAAGTTGTATGGGCTTAATATTCCGAGC
AATTATTGCCTCTAATGTTTTTGGTTATATATAAAGTTTTCCAAGCTCAGTCTGTCTCTTTATA
AAATAATTTAATAAGGTTGATTTAGTCACCCATAGATATCATCTAAGTCCTTTTATGAAGCACA
GAAGATCTTCATTTAAGCATGCTATGTGTATCGTTAGGAAGACCAGGTATAATCTTTGGATACA
ATTATTAAACAATGAACCAGATTCTCTCCAGTGCCTTAGTCACTTCCTAGTAACAGGTCAGAGT
GCATTCACTCCCTTGGGCCATCAAGGAAGCTGTTAGTGTATCGGAGCTCTACACTGTACAACAG
AATGGCTAAGGCACTGTGAAGGAGACTGTCCACTAAATCTCTTTAACTTGCCCTCATCCAACTG
TAGTTCTTAATACCTTCTTCCAGAATGCGTTTTGGATGTGAAATCTGAATAGGATCAGGAACCC
AGAAGGAAGGTTCATCATTTCAAATGAACTCTACTTAAGTGCATAGATATTACTTTCTTCCCAT
TATTTGGTGCACTCTTTTTACAGTAAATAAGTTCCCATTTTATTAAAGCAATAAGATATTATGT
TTTGAGCAGTGCTAGATGCTGATTCCACTTCCTTGGTGCTGAAGCGACTCATGTGTTCCTGCCT
TATGAATCAGTGCATTCAAGGCATGCAATAATAATCCCCTTCCAAGAAGCAGACTGTACACCCT
GGAGGGCAATGTCCTACATACCTTTTTTTCCCAGAAGGAATAGAGTGAACTAAGAAATAAACTA
ATTATGTGTATTTAAAAAAAACATCTTGATACCTCTAACCATAAGCACACATCTGTAATGTGCT
ATTATTGTGCACCTTTAAATGTATATGCCTTTTCCCCATCCATTAACTAGGGTTTAATATTTTA
ATAGTGTCCAGTGTAAAGAGGATGCAGCTCGTCAATCACATTTCATACTGAGTTTAATATGCTG
TGAACCTGGTGGCATCACACAAGATTTCTGTGAGCTAGAATGAGAATTACATGAAATTCTTGTA
GGCCAGATCCCACACCAAATTATTGTAGTAAGCATACGGCAACGCAGATTTCTATAGAGTCTGC
TTAGACTGCTGCTTAGAGAGCTTAACTGACCCATACGACATTCGAGGTTTCATTTTTATGAGAC
AAAAGGCAATATGAAAAATAGCTAAATTTACTCTAAGGATTTTATTTACTGCTGTCCCGTCAAA
CTAATTGCTCCAACCCTCTATAGCTACAGCTCGGTTCCCGCACTTGCTATTCAGTATTAATAAG
GTAGCATGCTTGATTCTTACTGTTTTAAAAATGAGAAAAAATAGAGAGAGAATGCCAATATGTC
AACTGTACGGGACTCTGACTCTTGAAGATGAAGATGGATATAATCTTTAGAATTTATATACACC
CATAGATATGTATTTATATATGCATACATTTTGTACAAATTTACAACGGACTTTTTGTATTCTC
TTTTCTGTCATTATGAGTATGAGACTGAAACCAAATAGTTGCTCCATCCTCTGATCCAGAGAGG
ATCCGAGGAGTCAGGCGTATGCATGCACTTGGTTCTCTGAGGTCAAATCGGAATGGCTTTCTCT
TTATTTAGTGGAAGGGGAGAGTCTTCCTTGGCTTGGGGAATTGGTAATTAGATAAGCTTCCTTT
CCTCTATTAGTGACTCAAATGTAGCAATGATAATGAAGTCATGACCATCTCTATGTGGTCCAGC
TATTTGGATGGATCAGAAATCTATCTATCTATCTACAAGAGCATTGGAGCCATCTTGACCACAA
TCATGGATTTCAATTCGATTTTTCCTTTTCCCTTTCAACTTATACGTTGTATGAGATACAACAT
ATACCTGCATATGTAAAGGTAAAATGAAACTATAACTATTATTTGTTTAGTTTGACAAGTAGCG
TTTTGGAAAACATGGACAAGTTAGCTTTAAAAATTACTGGGCATTTGACTTTTTAACCCTTCCT
GTCTGTAGCCATTGAATTGATTAGATACTTACTAAAATTTCTTTTTCCAATGCATAGGCATAGG
TTTTAAGTGCTTTATGTGGAAAATTGCTGAGAAATTACTAACTGATATTATCTGAGAGTTATGG
GCTAAATTGGAACCAGAAACTTTAACATGGCTTCTAAAGTCTACTCCCAGGAGTACCTAGGCTT
TGGACTGGAATCTGAAAAGCCACTTATTCATGTTTGGACGTTGCGGTGTGGTTCACAGATGTTC
ATGCAAAAATGAGTTGCCCCATCTACACAGAAAGGTATTTCATCACTGGGATGAATATAAATCT
GATTCTGGTTAGTCTTTTTTCCTTATTTGATAACATCTGAGAAGCAGATGTTATGACTTGACAT
CAATACTTATCAATGCCACCAACCCAATGACATGATTGGTGCGGTGTAGGAATGCTTAGTGGAG
AATAAGAACTTACTTAGCTTTAACTGAGAGACAGTGCATTATTTGGGTTGCTTTACCCATTTGA
GGCAAGATATTTCATTGAGACTTGTGGTCTCACAGGATTGCTGCTACAGAGAGGTTAACGACAG
TGTCGGCATCAACAGAAAAAGGTGATTTTTGAACTCTAGTATATCCAATAGATAGAATAAAACA
GGTATTAGAAATTCATGAAAAATTTGTTTTGCTTTTATATCAATAAAAGAGTTTTCTTGTTAA

hide sequence

RefSeq Acc Id:

XM_008766199 ⟹ XP_008764421

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	61,958,626 - 61,965,028 (-)	NCBI
mRatBN7.2	8	53,062,361 - 53,068,722 (-)	NCBI
Rnor_6.0	8	57,248,620 - 57,255,090 (-)	NCBI

Sequence:

show sequence

ACCCCAGCGGCAGGATGAGGGTGGGTAAGACCACTCCCGTGGCCTGCGCAGGCACCTCTGGTCA
GAGCTTCAGCCCCCGCCCCTGCCCCGGCGGAGGCTAGCGCGTTCCCTTGCTGCTCCGCAGTGCA
ACAGTTTGCACCTGCCTTTTGGGAGAGGCAAGGGAGCAGCTGTGCTGTCTGCCCGCAGGTCCTC
CGGCTTGGTCCTCTGACAGTCTCTGGGCCCTGGGGCCAGGGCCGGGGGAAGGCTGAAGACAAGC
ACTGTGCCTGGGGAAAGGAAACAAGATCAAAGAAGATCGGAGACAATCTCCCTGGGGCCACTAG
CTCCCGCCCGCTTGCTTGTGGGCAGTTGGTCCTTCAGTCTTTGGCTGGAGCGCTCACTCCCTCC
AGCGCTTAGAGAGCAGTTGGGGTGGCGTGGGCTCTTGTCCTCATCTTGGTTGGTGGGAACCGTG
TGTTCAACAGAGGAAGCCTGGTGGGCCTGGCCCCTCTCAGCCCAGCGCCGATGAGTGCCAGGGC
GCCGAAAGAGCTGAGGCTGGCCCTGCCGCCTTGTCTCCTGAACCGGACCTTTGCTTCCCACAAC
GCCAGTGGAGGCAGCAACGCAGGTATCCGCAGCTCAGGCGCAGGTGGTGGCACCTGCATCACGC
AGGTGGGACAGCAGCTCTTCCAGTCTTTTTCATCCACGCTGGTGCTGATTGTCCTGGTCACTCT
CATCTTCTGTCTCATCGTGCTGTCCCTCTCCACTTTCCACATCCACAAGCGTAGGATGAAGAAG
CGGAAGATGCAGAGGGCTCAGGAAGAATACGAGAGAGATCACTGCAGCGGCAGCCACGGTGGTG
GGGGGCTGCCTCGAGCAGGTGTTCAAGCCCCAACCCACGGAAAAGAAACCCGGCTGGAGAGGCA
GCCCCGGGACTCCGCCTTCTGCACCCCTTCCAATGCTACTTCTTCTTCCTCCTCATCCCCTGGT
CTCCTGTGCCAGGGTCCCTGTGCACCTCCGCCTCCACCGCCAGTCCCAAGTCCACACGGAGCAC
ACGCAGCTTCCTCCTGCTTGGACACACCGGGCGAGGGCCTTTTGCAAACGGTGGTACTGTCCTG
ATTGTGCAGCCCCTCTCCTGACCCTTTCCTCATTCCAGCATCTTTACCGTCCTCGCTTTTGTTC
TTGCTTTCTTCCTTTTCCGTTCTCCTTTGACCCCCGTTTTCTCTGCCCTCTTTCCTTACCTGGC
CACCCTTTCACTGTCTCTCCTCCGCCGAGGCACTGTGCGGTATTTGTAAATATTGGGCGAGGAA
AGTCTCAGAGGAAGAAATAACACTGATAAATACTTTATTGATATTTATAGTAATTATTATACTA
TTAATAACACAGTCCAAGCGCATGACAAATCACATAATTTCTCATTGTCAATGAAGGCTGCATC
TTCCCTCTCCACCCCGTGCCCCCCTCAGTAAAGAGGAGAAACCGCACAAGCTACCAAATATCTA
AAAGACATTGACACCTAAGCAAAGGATGGGAGGGGACCGGGGTGTTGTATATAGCTGTCAAGTG
AAAGTTTAGTCACCTTTTTGCCCCTCCCTCACGGGCTTTCTCTTTTCCTTTAGCTTGTCTCCCT
CCCCTTTCCTCACCTTCAGCTGGGCTCAGGCAATAGTATATTATAAAGGGAACATCTACAGAAA
GCACCAGAGACCACATAGAAGGTCCCAGAAAAACGTTTAGGACAGGTAACCCCTCTCCAGTCAG
TCATCCTCTCACTTTTTGGTGTCCTCCTCGGGCAGAATTTGAGTTTACTTTTAGAAATTATCTC
TCGCTGGCCGAGCGCAGAAAACAAAAACCATACTATCTGCTTTTGCTACCCGTTAGGCCCCACT
TGCACACTTGACTGGTGGTCATTTTGTTCTGTTCTGGTTTTTGGTTTTGGGGGGAGTGTCTTTT
TGGTTTTGTTTTGGACCTCAGAGAATCGGGAGCTGTCCAGCCAGGTCTGGTGCTGAATATGTCT
CATCTTCATGGTTACTTCCTCTGGTTGTGCAGACCAAAGAAGGAGCTGTTTTGGAAAGTGATCG
TCTTGGTTTTGATTGGTTTCTTTCTTCTTCTTTTCTACAATTGGATTAGCGTGTGCTATTGTTT
TTCTTATCATTATACATTATACATTGTATAAGTTACCTTTATGTGAAAAAAAAAAGTATTAGGT
AATGTGCAGTTTTGAAAATGCAGTATCTAACCAGCCACTATGTTTCTGTTTTATTTTTAGAACA
AGTGCACCTTTGTTATATATTATTATATCGGTACCAAATACAGAAGAAAACTATAGCTCTGTGA
TATAGCCTCCAAACTGTATATTCTTGTTCTGACTTTCCAGCTGTTGATAGAATGGTTGCCACTG
GCTGAGGAAGTCAGTGGTTCAGGCCTGCCTGGCTTCTGCTGTTTCCGGAAGTGTTCTTTTGTAT
TTTACTCTGTAGTAGACTATTATAAAATGATGACACCCGTGTTTCCCCCTTTTCTTTTGTGAAT
CACAGAAACAACCACAACAGAAAACAAATAATGGATGTGCTGGGACGCCATCTATTAAAAACAT
GGTTAATCTTTAAACAGTGCCTGTGGTCCTCTGCATGCAGTTGCCACCTGGAGGCAGTGCCGTG
TGTGCTTGTACTGTATGCATTTGGGGGGAAAGACTGGTGGAGATGTTGGGCAATTTGGATGACA
GGACATAACAACTTCTAAGTTAAATCCATAGATGCTTACAGGATAAAACTGTTTATAGCTTGCT
TAGTTATGACTCTGTGCCTGCATCCGATAGACGGGGAAATCTTCCTTCTTCCCAAGTCTGGCCT
AATTAACCACCCCGAACACCTAGAGAATGTTGAGGAAAAAGGAAAGCATGAGAGAAGATAAATC
TCTTTTGTCCTCTCTTTAAATGTCAGATAAGTCCATCTATGTGACACTTTGCTGCTTGGCTAAG
GCAGTGGGACCCCACATATCCCTCTCCCAAGCCACTAGCTGCCCTCTCCGCTGTGTCTTGTTCC
AAGTTGTATGGGCTTAATATTCCGAGCAATTATTGCCTCTAATGTTTTTGGTTATATATAAAGT
TTTCCAAGCTCAGTCTGTCTCTTTATAAAATAATTTAATAAGGTTGATTTAGTCACCCATAGAT
ATCATCTAAGTCCTTTTATGAAGCACAGAAGATCTTCATTTAAGCATGCTATGTGTATCGTTAG
GAAGACCAGGTATAATCTTTGGATACAATTATTAAACAATGAACCAGATTCTCTCCAGTGCCTT
AGTCACTTCCTAGTAACAGGTCAGAGTGCATTCACTCCCTTGGGCCATCAAGGAAGCTGTTAGT
GTATCGGAGCTCTACACTGTACAACAGAATGGCTAAGGCACTGTGAAGGAGACTGTCCACTAAA
TCTCTTTAACTTGCCCTCATCCAACTGTAGTTCTTAATACCTTCTTCCAGAATGCGTTTTGGAT
GTGAAATCTGAATAGGATCAGGAACCCAGAAGGAAGGTTCATCATTTCAAATGAACTCTACTTA
AGTGCATAGATATTACTTTCTTCCCATTATTTGGTGCACTCTTTTTACAGTAAATAAGTTCCCA
TTTTATTAAAGCAATAAGATATTATGTTTTGAGCAGTGCTAGATGCTGATTCCACTTCCTTGGT
GCTGAAGCGACTCATGTGTTCCTGCCTTATGAATCAGTGCATTCAAGGCATGCAATAATAATCC
CCTTCCAAGAAGCAGACTGTACACCCTGGAGGGCAATGTCCTACATACCTTTTTTTCCCAGAAG
GAATAGAGTGAACTAAGAAATAAACTAATTATGTGTATTTAAAAAAAACATCTTGATACCTCTA
ACCATAAGCACACATCTGTAATGTGCTATTATTGTGCACCTTTAAATGTATATGCCTTTTCCCC
ATCCATTAACTAGGGTTTAATATTTTAATAGTGTCCAGTGTAAAGAGGATGCAGCTCGTCAATC
ACATTTCATACTGAGTTTAATATGCTGTGAACCTGGTGGCATCACACAAGATTTCTGTGAGCTA
GAATGAGAATTACATGAAATTCTTGTAGGCCAGATCCCACACCAAATTATTGTAGTAAGCATAC
GGCAACGCAGATTTCTATAGAGTCTGCTTAGACTGCTGCTTAGAGAGCTTAACTGACCCATACG
ACATTCGAGGTTTCATTTTTATGAGACAAAAGGCAATATGAAAAATAGCTAAATTTACTCTAAG
GATTTTATTTACTGCTGTCCCGTCAAACTAATTGCTCCAACCCTCTATAGCTACAGCTCGGTTC
CCGCACTTGCTATTCAGTATTAATAAGGTAGCATGCTTGATTCTTACTGTTTTAAAAATGAGAA
AAAATAGAGAGAGAATGCCAATATGTCAACTGTACGGGACTCTGACTCTTGAAGATGAAGATGG
ATATAATCTTTAGAATTTATATACACCCATAGATATGTATTTATATATGCATACATTTTGTACA
AATTTACAACGGACTTTTTGTATTCTCTTTTCTGTCATTATGAGTATGAGACTGAAACCAAATA
GTTGCTCCATCCTCTGATCCAGAGAGGATCCGAGGAGTCAGGCGTATGCATGCACTTGGTTCTC
TGAGGTCAAATCGGAATGGCTTTCTCTTTATTTAGTGGAAGGGGAGAGTCTTCCTTGGCTTGGG
GAATTGGTAATTAGATAAGCTTCCTTTCCTCTATTAGTGACTCAAATGTAGCAATGATAATGAA
GTCATGACCATCTCTATGTGGTCCAGCTATTTGGATGGATCAGAAATCTATCTATCTATCTACA
AGAGCATTGGAGCCATCTTGACCACAATCATGGATTTCAATTCGATTTTTCCTTTTCCCTTTCA
ACTTATACGTTGTATGAGATACAACATATACCTGCATATGTAAAGGTAAAATGAAACTATAACT
ATTATTTGTTTAGTTTGACAAGTAGCGTTTTGGAAAACATGGACAAGTTAGCTTTAAAAATTAC
TGGGCATTTGACTTTTTAACCCTTCCTGTCTGTAGCCATTGAATTGATTAGATACTTACTAAAA
TTTCTTTTTCCAATGCATAGGCATAGGTTTTAAGTGCTTTATGTGGAAAATTGCTGAGAAATTA
CTAACTGATATTATCTGAGAGTTATGGGCTAAATTGGAACCAGAAACTTTAACATGGCTTCTAA
AGTCTACTCCCAGGAGTACCTAGGCTTTGGACTGGAATCTGAAAAGCCACTTATTCATGTTTGG
ACGTTGCGGTGTGGTTCACAGATGTTCATGCAAAAATGAGTTGCCCCATCTACACAGAAAGGTA
TTTCATCACTGGGATGAATATAAATCTGATTCTGGTTAGTCTTTTTTCCTTATTTGATAACATC
TGAGAAGCAGATGTTATGACTTGACATCAATACTTATCAATGCCACCAACCCAATGACATGATT
GGTGCGGTGTAGGAATGCTTAGTGGAGAATAAGAACTTACTTAGCTTTAACTGAGAGACAGTGC
ATTATTTGGGTTGCTTTACCCATTTGAGGCAAGATATTTCATTGAGACTTGTGGTCTCACAGGA
TTGCTGCTACAGAGAGGTTAACGACAGTGTCGGCATCAACAGAAAAAGGTGATTTTTGAACTCT
AGTATATCCAATAGATAGAATAAAACAGGTATTAGAAATTCATGAAAAATTTGTTTTGCTTTTA
TATCAATAAAAGAGTTTTCTTGTTAA

hide sequence

RefSeq Acc Id:

XM_017595396 ⟹ XP_017450885

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	61,958,626 - 61,966,119 (-)	NCBI
mRatBN7.2	8	53,062,361 - 53,069,882 (-)	NCBI
Rnor_6.0	8	57,248,620 - 57,255,599 (-)	NCBI

Sequence:

show sequence

CTGTACCTGGAGACCGGTTGAGGTTGAAGCACCGAGCAATGGAAGAACTGAAGCCTGCGTCTTC
CTAGGCAAAGGAGTGCTTGTGCTGAAGGCTAAGAGCTGAGCTCCCTGTAGCAGCAGCAAAGGCA
GCGGCAGCGGCGGCGGCGGCGGCGGCGAGGGCGGCAGCAGCAGCGCGGCTCTGTCTCTGGTCCC
AGCGCTCCGTGCTTTCTGCAGCCGCCACTGCAGCCAAGGCGGGGGCTTCTTCTCTGCAACTGGC
TGGCCCTTCCAGCACTGTGCCTGGGGAAAGGAAACAAGATCAAAGAAGATCGGAGACAATCTCC
CTGGGGCCACTAGCTCCCGCCCGCTTGCTTGTGGGCAGTTGGTCCTTCAGTCTTTGGCTGGAGC
GCTCACTCCCTCCAGCGCTTAGAGAGCAGTTGGGGTGGCGTGGGCTCTTGTCCTCATCTTGGTT
GGTGGGAACCGTGTGTTCAACAGAGGAAGCCTGGTGGGCCTGGCCCCTCTCAGCCCAGCGCCGA
TGAGTGCCAGGGCGCCGAAAGAGCTGAGGCTGGCCCTGCCGCCTTGTCTCCTGAACCGGACCTT
TGCTTCCCACAACGCCAGTGGAGGCAGCAACGCAGGTATCCGCAGCTCAGGCGCAGGTGGTGGC
ACCTGCATCACGCAGGTGGGACAGCAGCTCTTCCAGTCTTTTTCATCCACGCTGGTGCTGATTG
TCCTGGTCACTCTCATCTTCTGTCTCATCGTGCTGTCCCTCTCCACTTTCCACATCCACAAGCG
TAGGATGAAGAAGCGGAAGATGCAGAGGGCTCAGGAAGAATACGAGAGAGATCACTGCAGCGGC
AGCCACGGTGGTGGGGGGCTGCCTCGAGCAGGTGTTCAAGCCCCAACCCACGGAAAAGAAACCC
GGCTGGAGAGGCAGCCCCGGGACTCCGCCTTCTGCACCCCTTCCAATGCTACTTCTTCTTCCTC
CTCATCCCCTGGTCTCCTGTGCCAGGGTCCCTGTGCACCTCCGCCTCCACCGCCAGTCCCAAGT
CCACACGGAGCACACGCAGCTTCCTCCTGCTTGGACACACCGGGCGAGGGCCTTTTGCAAACGG
TGGTACTGTCCTGATTGTGCAGCCCCTCTCCTGACCCTTTCCTCATTCCAGCATCTTTACCGTC
CTCGCTTTTGTTCTTGCTTTCTTCCTTTTCCGTTCTCCTTTGACCCCCGTTTTCTCTGCCCTCT
TTCCTTACCTGGCCACCCTTTCACTGTCTCTCCTCCGCCGAGGCACTGTGCGGTATTTGTAAAT
ATTGGGCGAGGAAAGTCTCAGAGGAAGAAATAACACTGATAAATACTTTATTGATATTTATAGT
AATTATTATACTATTAATAACACAGTCCAAGCGCATGACAAATCACATAATTTCTCATTGTCAA
TGAAGGCTGCATCTTCCCTCTCCACCCCGTGCCCCCCTCAGTAAAGAGGAGAAACCGCACAAGC
TACCAAATATCTAAAAGACATTGACACCTAAGCAAAGGATGGGAGGGGACCGGGGTGTTGTATA
TAGCTGTCAAGTGAAAGTTTAGTCACCTTTTTGCCCCTCCCTCACGGGCTTTCTCTTTTCCTTT
AGCTTGTCTCCCTCCCCTTTCCTCACCTTCAGCTGGGCTCAGGCAATAGTATATTATAAAGGGA
ACATCTACAGAAAGCACCAGAGACCACATAGAAGGTCCCAGAAAAACGTTTAGGACAGGTAACC
CCTCTCCAGTCAGTCATCCTCTCACTTTTTGGTGTCCTCCTCGGGCAGAATTTGAGTTTACTTT
TAGAAATTATCTCTCGCTGGCCGAGCGCAGAAAACAAAAACCATACTATCTGCTTTTGCTACCC
GTTAGGCCCCACTTGCACACTTGACTGGTGGTCATTTTGTTCTGTTCTGGTTTTTGGTTTTGGG
GGGAGTGTCTTTTTGGTTTTGTTTTGGACCTCAGAGAATCGGGAGCTGTCCAGCCAGGTCTGGT
GCTGAATATGTCTCATCTTCATGGTTACTTCCTCTGGTTGTGCAGACCAAAGAAGGAGCTGTTT
TGGAAAGTGATCGTCTTGGTTTTGATTGGTTTCTTTCTTCTTCTTTTCTACAATTGGATTAGCG
TGTGCTATTGTTTTTCTTATCATTATACATTATACATTGTATAAGTTACCTTTATGTGAAAAAA
AAAAGTATTAGGTAATGTGCAGTTTTGAAAATGCAGTATCTAACCAGCCACTATGTTTCTGTTT
TATTTTTAGAACAAGTGCACCTTTGTTATATATTATTATATCGGTACCAAATACAGAAGAAAAC
TATAGCTCTGTGATATAGCCTCCAAACTGTATATTCTTGTTCTGACTTTCCAGCTGTTGATAGA
ATGGTTGCCACTGGCTGAGGAAGTCAGTGGTTCAGGCCTGCCTGGCTTCTGCTGTTTCCGGAAG
TGTTCTTTTGTATTTTACTCTGTAGTAGACTATTATAAAATGATGACACCCGTGTTTCCCCCTT
TTCTTTTGTGAATCACAGAAACAACCACAACAGAAAACAAATAATGGATGTGCTGGGACGCCAT
CTATTAAAAACATGGTTAATCTTTAAACAGTGCCTGTGGTCCTCTGCATGCAGTTGCCACCTGG
AGGCAGTGCCGTGTGTGCTTGTACTGTATGCATTTGGGGGGAAAGACTGGTGGAGATGTTGGGC
AATTTGGATGACAGGACATAACAACTTCTAAGTTAAATCCATAGATGCTTACAGGATAAAACTG
TTTATAGCTTGCTTAGTTATGACTCTGTGCCTGCATCCGATAGACGGGGAAATCTTCCTTCTTC
CCAAGTCTGGCCTAATTAACCACCCCGAACACCTAGAGAATGTTGAGGAAAAAGGAAAGCATGA
GAGAAGATAAATCTCTTTTGTCCTCTCTTTAAATGTCAGATAAGTCCATCTATGTGACACTTTG
CTGCTTGGCTAAGGCAGTGGGACCCCACATATCCCTCTCCCAAGCCACTAGCTGCCCTCTCCGC
TGTGTCTTGTTCCAAGTTGTATGGGCTTAATATTCCGAGCAATTATTGCCTCTAATGTTTTTGG
TTATATATAAAGTTTTCCAAGCTCAGTCTGTCTCTTTATAAAATAATTTAATAAGGTTGATTTA
GTCACCCATAGATATCATCTAAGTCCTTTTATGAAGCACAGAAGATCTTCATTTAAGCATGCTA
TGTGTATCGTTAGGAAGACCAGGTATAATCTTTGGATACAATTATTAAACAATGAACCAGATTC
TCTCCAGTGCCTTAGTCACTTCCTAGTAACAGGTCAGAGTGCATTCACTCCCTTGGGCCATCAA
GGAAGCTGTTAGTGTATCGGAGCTCTACACTGTACAACAGAATGGCTAAGGCACTGTGAAGGAG
ACTGTCCACTAAATCTCTTTAACTTGCCCTCATCCAACTGTAGTTCTTAATACCTTCTTCCAGA
ATGCGTTTTGGATGTGAAATCTGAATAGGATCAGGAACCCAGAAGGAAGGTTCATCATTTCAAA
TGAACTCTACTTAAGTGCATAGATATTACTTTCTTCCCATTATTTGGTGCACTCTTTTTACAGT
AAATAAGTTCCCATTTTATTAAAGCAATAAGATATTATGTTTTGAGCAGTGCTAGATGCTGATT
CCACTTCCTTGGTGCTGAAGCGACTCATGTGTTCCTGCCTTATGAATCAGTGCATTCAAGGCAT
GCAATAATAATCCCCTTCCAAGAAGCAGACTGTACACCCTGGAGGGCAATGTCCTACATACCTT
TTTTTCCCAGAAGGAATAGAGTGAACTAAGAAATAAACTAATTATGTGTATTTAAAAAAAACAT
CTTGATACCTCTAACCATAAGCACACATCTGTAATGTGCTATTATTGTGCACCTTTAAATGTAT
ATGCCTTTTCCCCATCCATTAACTAGGGTTTAATATTTTAATAGTGTCCAGTGTAAAGAGGATG
CAGCTCGTCAATCACATTTCATACTGAGTTTAATATGCTGTGAACCTGGTGGCATCACACAAGA
TTTCTGTGAGCTAGAATGAGAATTACATGAAATTCTTGTAGGCCAGATCCCACACCAAATTATT
GTAGTAAGCATACGGCAACGCAGATTTCTATAGAGTCTGCTTAGACTGCTGCTTAGAGAGCTTA
ACTGACCCATACGACATTCGAGGTTTCATTTTTATGAGACAAAAGGCAATATGAAAAATAGCTA
AATTTACTCTAAGGATTTTATTTACTGCTGTCCCGTCAAACTAATTGCTCCAACCCTCTATAGC
TACAGCTCGGTTCCCGCACTTGCTATTCAGTATTAATAAGGTAGCATGCTTGATTCTTACTGTT
TTAAAAATGAGAAAAAATAGAGAGAGAATGCCAATATGTCAACTGTACGGGACTCTGACTCTTG
AAGATGAAGATGGATATAATCTTTAGAATTTATATACACCCATAGATATGTATTTATATATGCA
TACATTTTGTACAAATTTACAACGGACTTTTTGTATTCTCTTTTCTGTCATTATGAGTATGAGA
CTGAAACCAAATAGTTGCTCCATCCTCTGATCCAGAGAGGATCCGAGGAGTCAGGCGTATGCAT
GCACTTGGTTCTCTGAGGTCAAATCGGAATGGCTTTCTCTTTATTTAGTGGAAGGGGAGAGTCT
TCCTTGGCTTGGGGAATTGGTAATTAGATAAGCTTCCTTTCCTCTATTAGTGACTCAAATGTAG
CAATGATAATGAAGTCATGACCATCTCTATGTGGTCCAGCTATTTGGATGGATCAGAAATCTAT
CTATCTATCTACAAGAGCATTGGAGCCATCTTGACCACAATCATGGATTTCAATTCGATTTTTC
CTTTTCCCTTTCAACTTATACGTTGTATGAGATACAACATATACCTGCATATGTAAAGGTAAAA
TGAAACTATAACTATTATTTGTTTAGTTTGACAAGTAGCGTTTTGGAAAACATGGACAAGTTAG
CTTTAAAAATTACTGGGCATTTGACTTTTTAACCCTTCCTGTCTGTAGCCATTGAATTGATTAG
ATACTTACTAAAATTTCTTTTTCCAATGCATAGGCATAGGTTTTAAGTGCTTTATGTGGAAAAT
TGCTGAGAAATTACTAACTGATATTATCTGAGAGTTATGGGCTAAATTGGAACCAGAAACTTTA
ACATGGCTTCTAAAGTCTACTCCCAGGAGTACCTAGGCTTTGGACTGGAATCTGAAAAGCCACT
TATTCATGTTTGGACGTTGCGGTGTGGTTCACAGATGTTCATGCAAAAATGAGTTGCCCCATCT
ACACAGAAAGGTATTTCATCACTGGGATGAATATAAATCTGATTCTGGTTAGTCTTTTTTCCTT
ATTTGATAACATCTGAGAAGCAGATGTTATGACTTGACATCAATACTTATCAATGCCACCAACC
CAATGACATGATTGGTGCGGTGTAGGAATGCTTAGTGGAGAATAAGAACTTACTTAGCTTTAAC
TGAGAGACAGTGCATTATTTGGGTTGCTTTACCCATTTGAGGCAAGATATTTCATTGAGACTTG
TGGTCTCACAGGATTGCTGCTACAGAGAGGTTAACGACAGTGTCGGCATCAACAGAAAAAGGTG
ATTTTTGAACTCTAGTATATCCAATAGATAGAATAAAACAGGTATTAGAAATTCATGAAAAATT
TGTTTTGCTTTTATATCAATAAAAGAGTTTTCTTGTTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001096824	(Get FASTA)	NCBI Sequence Viewer
	XP_006243126	(Get FASTA)	NCBI Sequence Viewer
	XP_008764421	(Get FASTA)	NCBI Sequence Viewer
	XP_017450885	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH92621	(Get FASTA)	NCBI Sequence Viewer
	EDL95509	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000062036
	ENSRNOP00000062036.1
	ENSRNOP00000094101
	ENSRNOP00000094101.1
GenBank Protein	Q569A3	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001096824 ⟸ NM_001103354
- Peptide Label:	precursor
- UniProtKB:	Q569A3 (UniProtKB/Swiss-Prot), A6J4I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSARAPKELRLALPPCLLNRTFASHNASGGSNAGIRSSGAGGGTCITQVGQQLFQSFSSTLVLI VLVTLIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSHGGGGLPRAGVQAPTHGKET RLERQPRDSAFCTPSNATSSSSSSPGLLCQGPCAPPPPPPVPSPHGAHAASSCLDTPGEGLLQT VVLS hide sequence

RefSeq Acc Id:	XP_006243126 ⟸ XM_006243064
- Peptide Label:	isoform X1
- UniProtKB:	Q569A3 (UniProtKB/Swiss-Prot), A6J4I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSARAPKELRLALPPCLLNRTFASHNASGGSNAGIRSSGAGGGTCITQVGQQLFQSFSSTLVLI VLVTLIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSHGGGGLPRAGVQAPTHGKET RLERQPRDSAFCTPSNATSSSSSSPGLLCQGPCAPPPPPPVPSPHGAHAASSCLDTPGEGLLQT VVLS hide sequence

RefSeq Acc Id:	XP_008764421 ⟸ XM_008766199
- Peptide Label:	isoform X1
- UniProtKB:	Q569A3 (UniProtKB/Swiss-Prot), A6J4I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSARAPKELRLALPPCLLNRTFASHNASGGSNAGIRSSGAGGGTCITQVGQQLFQSFSSTLVLI VLVTLIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSHGGGGLPRAGVQAPTHGKET RLERQPRDSAFCTPSNATSSSSSSPGLLCQGPCAPPPPPPVPSPHGAHAASSCLDTPGEGLLQT VVLS hide sequence

RefSeq Acc Id:	XP_017450885 ⟸ XM_017595396
- Peptide Label:	isoform X1
- UniProtKB:	Q569A3 (UniProtKB/Swiss-Prot), A6J4I6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSARAPKELRLALPPCLLNRTFASHNASGGSNAGIRSSGAGGGTCITQVGQQLFQSFSSTLVLI VLVTLIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSHGGGGLPRAGVQAPTHGKET RLERQPRDSAFCTPSNATSSSSSSPGLLCQGPCAPPPPPPVPSPHGAHAASSCLDTPGEGLLQT VVLS hide sequence

Ensembl Acc Id:

ENSRNOP00000062036 ⟸ ENSRNOT00000028972

Ensembl Acc Id:

ENSRNOP00000094101 ⟸ ENSRNOT00000114873

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q569A3-F1-model_v2	AlphaFold	Q569A3	1-196	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695966

Promoter ID:

EPDNEW_R6491

Type:

multiple initiation site

Name:

LOC100125362_1

Description:

hypothetical protein LOC100125362

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	8	57,255,272 - 57,255,332	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1642426	AgrOrtholog
BioCyc Gene	G2FUF-30470	BioCyc
Ensembl Genes	ENSRNOG00000025463	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000028972	ENTREZGENE
	ENSRNOT00000028972.4	UniProtKB/Swiss-Prot
	ENSRNOT00000114873	ENTREZGENE
	ENSRNOT00000114873.1	UniProtKB/Swiss-Prot
IMAGE_CLONE	IMAGE:7313228	IMAGE-MGC_LOAD
InterPro	C11orf87	UniProtKB/Swiss-Prot
KEGG Report	rno:100125362	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:109299	IMAGE-MGC_LOAD
NCBI Gene	100125362	ENTREZGENE
PANTHER	PTHR31870	UniProtKB/Swiss-Prot
	SI:DKEY-183I3.9-RELATED	UniProtKB/Swiss-Prot
PhenoGen	C8h11orf87	PhenoGen
RatGTEx	ENSRNOG00000025463	RatGTEx
UniProt	A6J4I6	ENTREZGENE, UniProtKB/TrEMBL
	CK087_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2023-09-19	C8h11orf87	similar to human chromosome 11 open reading frame 87	LOC100125362	hypothetical protein LOC100125362	Symbol and Name Changed	1299863	APPROVED
2007-09-15	LOC100125362	hypothetical protein LOC100125362			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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