Faul1 (FAU ubiquitin like and ribosomal protein S30 fusion like 1) - Rat Genome Database

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Gene: Faul1 (FAU ubiquitin like and ribosomal protein S30 fusion like 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Faul1 (Ensembl: Fau)
Name: FAU ubiquitin like and ribosomal protein S30 fusion like 1 (Ensembl:FAU ubiquitin like and ribosomal protein S30 fusion)
RGD ID: 1597505
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytosol and ribosome. Predicted to be part of ribonucleoprotein complex.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100360647; LOC687780; similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed; ubiquitin-like protein FUBI; ubiquitin-like protein fubi and ribosomal protein S30-like
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8688,964,786 - 88,965,507 (+)NCBIGRCr8
mRatBN7.2683,228,751 - 83,229,261 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl683,228,767 - 83,229,272 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0686,131,189 - 86,131,699 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,131,242 - 86,131,643 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,420,271 - 221,421,842 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,921,721 - 86,922,122 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0695,634,337 - 95,634,836 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4686,526,456 - 86,526,936 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera681,796,682 - 81,797,192 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Variants

.
Variants in Faul1
4 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat

Markers in Region
RH93189  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0696,410,799 - 96,410,985NCBIRnor5.0
Rnor_5.0695,634,493 - 95,634,679NCBIRnor5.0
Rnor_5.01190,886,698 - 190,886,883NCBIRnor5.0
RGSC_v3.41172,430,423 - 172,430,608UniSTSRGSC3.4
RGSC_v3.4686,526,607 - 86,526,792UniSTSRGSC3.4
Celera1166,479,045 - 166,479,230UniSTS
Celera681,796,850 - 81,797,035UniSTS
Cytogenetic Map6q24UniSTS
Cytogenetic Map1q43UniSTS
RH129687  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q43UniSTS
RH130008  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map31195.11UniSTS
Cytogenetic Map1q43UniSTS
RH142169  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q43UniSTS
Cytogenetic Map10q25UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000028481   ⟹   ENSRNOP00000028481
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1203,350,288 - 203,351,721 (+)Ensembl
Rnor_6.0 Ensembl1221,420,271 - 221,421,842 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000039337   ⟹   ENSRNOP00000034657
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl686,131,242 - 86,131,643 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000048726   ⟹   ENSRNOP00000042031
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl683,228,767 - 83,229,272 (+)Ensembl
Rnor_6.0 Ensembl686,921,721 - 86,922,122 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000117176   ⟹   ENSRNOP00000079924
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1203,350,189 - 203,351,742 (+)Ensembl
RefSeq Acc Id: XM_003750169   ⟹   XP_003750217
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8688,964,786 - 88,965,507 (+)NCBI
mRatBN7.2683,228,751 - 83,229,261 (+)NCBI
Rnor_6.0686,131,189 - 86,131,699 (+)NCBI
Rnor_5.0695,634,337 - 95,634,836 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003750217 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000028481.4
  ENSRNOP00000042031
  ENSRNOP00000042031.3
  ENSRNOP00000087401.1
Reference Protein Sequences
RefSeq Acc Id: XP_003750217   ⟸   XM_003750169
- UniProtKB: Q5BJN7 (UniProtKB/TrEMBL),   D4A7R8 (UniProtKB/TrEMBL),   A0A9K3Y6P2 (UniProtKB/TrEMBL),   A0A8I6A5S6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000028481   ⟸   ENSRNOT00000028481
RefSeq Acc Id: ENSRNOP00000034657   ⟸   ENSRNOT00000039337
RefSeq Acc Id: ENSRNOP00000042031   ⟸   ENSRNOT00000048726
RefSeq Acc Id: ENSRNOP00000079924   ⟸   ENSRNOT00000117176
Protein Domains
Ubiquitin-like

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1597505 AgrOrtholog
BioCyc Gene G2FUF-37317 BioCyc
Ensembl Genes ENSRNOG00000018083 UniProtKB/TrEMBL
  ENSRNOG00000020982 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000046393 Ensembl
  ENSRNOG00000047365 Ensembl
  ENSRNOG00000062652 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000024338.4 UniProtKB/TrEMBL
  ENSRNOT00000028481.7 UniProtKB/TrEMBL
  ENSRNOT00000048726.4 UniProtKB/TrEMBL
InterPro FUBI UniProtKB/TrEMBL
  Ribosomal_S30 UniProtKB/TrEMBL
  Ubiquitin UniProtKB/TrEMBL
  Ubiquitin-like UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
  Ubiquitin_CS UniProtKB/TrEMBL
KEGG Report rno:29752 UniProtKB/TrEMBL
  rno:687780 UniProtKB/TrEMBL
NCBI Gene 687780 ENTREZGENE
PANTHER 40S RIBOSOMAL PROTEIN S30 UniProtKB/TrEMBL
  40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI UniProtKB/TrEMBL
Pfam Ribosomal_S30 UniProtKB/TrEMBL
  ubiquitin UniProtKB/TrEMBL
PhenoGen Faul1 PhenoGen
PRINTS UBIQUITIN UniProtKB/TrEMBL
PROSITE UBIQUITIN_1 UniProtKB/TrEMBL
  UBIQUITIN_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018083 RatGTEx
  ENSRNOG00000020982 RatGTEx
  ENSRNOG00000046393 RatGTEx
  ENSRNOG00000047365 RatGTEx
  ENSRNOG00000062652 RatGTEx
SMART UBQ UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/TrEMBL
UniProt A0A8I6A5S6 ENTREZGENE, UniProtKB/TrEMBL
  A0A9K3Y6P2 ENTREZGENE, UniProtKB/TrEMBL
  D4A7R8 ENTREZGENE
  Q5BJN7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary D4A7R8 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Faul1  FAU ubiquitin like and ribosomal protein S30 fusion like 1  LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed  Symbol and Name Changed 1299863 APPROVED
2021-03-09 LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed  LOC100360647  ubiquitin-like protein fubi and ribosomal protein S30-like  Data merged from RGD:2321710 737654 PROVISIONAL
2010-05-06 LOC100360647  ubiquitin-like protein fubi and ribosomal protein S30-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed      Symbol and Name status set to provisional 70820 PROVISIONAL