Faul1 (FAU ubiquitin like and ribosomal protein S30 fusion like 1) - Rat Genome Database

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Gene: Faul1 (FAU ubiquitin like and ribosomal protein S30 fusion like 1) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Faul1 (Ensembl: Fau)
Name: FAU ubiquitin like and ribosomal protein S30 fusion like 1 (Ensembl:FAU ubiquitin like and ribosomal protein S30 fusion)
RGD ID: 1597505
Description: ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN cytosol (inferred); ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC100360647; LOC687780; similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed; ubiquitin-like protein FUBI; ubiquitin-like protein fubi and ribosomal protein S30-like
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8688,964,786 - 88,965,507 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1163,553,702 - 163,554,835 (+)EnsemblGRCr8
GRCr8 Ensembl1212,779,473 - 212,781,026 (+)EnsemblGRCr8
mRatBN7.2683,228,751 - 83,229,261 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1154,141,584 - 154,142,717 (+)EnsemblmRatBN7.2
Rnor_6.0686,131,189 - 86,131,699 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,131,242 - 86,131,643 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl686,921,721 - 86,922,122 (+)Ensemblrn6Rnor6.0
Rnor_6.0 Ensembl1221,420,271 - 221,421,842 (+)Ensemblrn6Rnor6.0
Rnor_5.0695,634,337 - 95,634,836 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4686,526,456 - 86,526,936 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera681,796,682 - 81,797,192 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)64451097489510974Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)671278722116278722Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)664367996109367996Rat
2293088Iddm28Insulin dependent diabetes mellitus QTL 285.21blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)668767270135411972Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)688019181136741135Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)66345744194939581Rat
4889933Bss88Bone structure and strength QTL 883.8tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)65368492198684921Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)679198463144254945Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)646050607116278722Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)64604735391047353Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)64515378690153786Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)64451097489510974Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)684490437129490437Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)686867923110125012Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)66303731995934232Rat
5684963Bss99Bone structure and strength QTL 993.1tibia area (VT:1000281)tibia area measurement (CMO:0001382)65368492198684921Rat
5684992Bmd83Bone mineral density QTL 824.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)65368492198684921Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)678204640123204640Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)676937178121937178Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)686494122112380234Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)66345744194939581Rat

Markers in Region
RH93189  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.0696,410,799 - 96,410,985NCBIRnor5.0
Rnor_5.0695,634,493 - 95,634,679NCBIRnor5.0
Rnor_5.01190,886,698 - 190,886,883NCBIRnor5.0
RGSC_v3.41172,430,423 - 172,430,608UniSTSRGSC3.4
RGSC_v3.4686,526,607 - 86,526,792UniSTSRGSC3.4
Celera1166,479,045 - 166,479,230UniSTS
Celera681,796,850 - 81,797,035UniSTS
Cytogenetic Map6q24UniSTS
Cytogenetic Map1q43UniSTS
RH129687  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q43UniSTS
RH130008  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map31195.11UniSTS
Cytogenetic Map1q43UniSTS
RH142169  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q43UniSTS
Cytogenetic Map10q25UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
7 1 18 52 67 138 95 11 51 36 32 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000028481   ⟹   ENSRNOP00000028481
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1212,779,473 - 212,781,026 (+)Ensembl
mRatBN7.2 Ensembl1203,350,288 - 203,351,721 (+)Ensembl
Rnor_6.0 Ensembl1221,420,271 - 221,421,842 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000039337   ⟹   ENSRNOP00000034657
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,061,852 - 178,071,513 (-)Ensembl
Rnor_6.0 Ensembl686,131,242 - 86,131,643 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000048726   ⟹   ENSRNOP00000042031
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,061,880 - 178,183,688 (-)Ensembl
mRatBN7.2 Ensembl683,228,767 - 83,229,272 (+)Ensembl
Rnor_6.0 Ensembl686,921,721 - 86,922,122 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000117176   ⟹   ENSRNOP00000079924
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1203,350,189 - 203,351,742 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000170231   ⟹   ENSRNOP00000100110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,061,740 - 178,105,544 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000170953   ⟹   ENSRNOP00000109050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1178,061,553 - 178,185,430 (-)Ensembl
RefSeq Acc Id: XM_003750169   ⟹   XP_003750217
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8688,964,786 - 88,965,507 (+)NCBI
mRatBN7.2683,228,751 - 83,229,261 (+)NCBI
Rnor_6.0686,131,189 - 86,131,699 (+)NCBI
Rnor_5.0695,634,337 - 95,634,836 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001419077 (Get FASTA)   NCBI Sequence Viewer  
  XP_003750217 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000028481.4
  ENSRNOP00000034657.6
  ENSRNOP00000042031.4
  ENSRNOP00000087401.1
  ENSRNOP00000100110.1
  ENSRNOP00000109050.1
RefSeq Acc Id: XP_003750217   ⟸   XM_003750169
- Sequence:
Ensembl Acc Id: ENSRNOP00000028481   ⟸   ENSRNOT00000028481
Ensembl Acc Id: ENSRNOP00000034657   ⟸   ENSRNOT00000039337
Ensembl Acc Id: ENSRNOP00000042031   ⟸   ENSRNOT00000048726
Ensembl Acc Id: ENSRNOP00000079924   ⟸   ENSRNOT00000117176
Ensembl Acc Id: ENSRNOP00000109050   ⟸   ENSRNOT00000170953
Ensembl Acc Id: ENSRNOP00000100110   ⟸   ENSRNOT00000170231
Protein Domains
Ubiquitin-like

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1597505 AgrOrtholog
BioCyc Gene G2FUF-37317 BioCyc
Ensembl Genes ENSRNOG00000018083 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000020982 Ensembl, UniProtKB/TrEMBL
  ENSRNOG00000046393 Ensembl
  ENSRNOG00000047365 Ensembl
  ENSRNOG00000062652 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000024338.5 UniProtKB/TrEMBL
  ENSRNOT00000028481.8 UniProtKB/TrEMBL
  ENSRNOT00000039337.7 UniProtKB/TrEMBL
  ENSRNOT00000048726.5 UniProtKB/TrEMBL
  ENSRNOT00000170231.1 UniProtKB/TrEMBL
  ENSRNOT00000170953.1 UniProtKB/TrEMBL
Gene3D-CATH Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/TrEMBL
InterPro FUBI UniProtKB/TrEMBL
  Ribosomal_S30 UniProtKB/TrEMBL
  Ubiquitin UniProtKB/TrEMBL
  Ubiquitin-like UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
  Ubiquitin_CS UniProtKB/TrEMBL
KEGG Report rno:29752 UniProtKB/TrEMBL
  rno:687780 UniProtKB/TrEMBL
NCBI Gene 687780 ENTREZGENE
PANTHER 40S RIBOSOMAL PROTEIN S30 UniProtKB/TrEMBL
  40S RIBOSOMAL PROTEIN S30-RELATED UniProtKB/TrEMBL
  40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI UniProtKB/TrEMBL
Pfam Ribosomal_S30 UniProtKB/TrEMBL
  ubiquitin UniProtKB/TrEMBL
PhenoGen Faul1 PhenoGen
PRINTS UBIQUITIN UniProtKB/TrEMBL
PROSITE UBIQUITIN_1 UniProtKB/TrEMBL
  UBIQUITIN_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000018083 RatGTEx
  ENSRNOG00000020982 RatGTEx
  ENSRNOG00000046393 RatGTEx
  ENSRNOG00000047365 RatGTEx
  ENSRNOG00000062652 RatGTEx
SMART UBQ UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/TrEMBL
UniProt A0A8I6A5S6 ENTREZGENE, UniProtKB/TrEMBL
  A0A9K3Y6P2 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0M1Y5_RAT UniProtKB/TrEMBL
  D4A7R8 ENTREZGENE
  K7GK60_RAT UniProtKB/TrEMBL
  Q5BJN7 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary D4A7R8 UniProtKB/TrEMBL
  F8WGA4 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Faul1  FAU ubiquitin like and ribosomal protein S30 fusion like 1  LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed  Symbol and Name Changed 1299863 APPROVED
2021-03-09 LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed  LOC100360647  ubiquitin-like protein fubi and ribosomal protein S30-like  Data merged from RGD:2321710 737654 PROVISIONAL
2010-05-06 LOC100360647  ubiquitin-like protein fubi and ribosomal protein S30-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-20 LOC687780  similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed      Symbol and Name status set to provisional 70820 PROVISIONAL