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Gene: C1h19orf18 (similar to human chromosome 19 open reading frame 18) Rattus norvegicus

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Symbol:

C1h19orf18

Name:

similar to human chromosome 19 open reading frame 18

RGD ID:

1595996

Description:

Predicted to be located in membrane. Orthologous to human C19orf18 (chromosome 19 open reading frame 18); INTERACTS WITH 3-isobutyl-1-methyl-7H-xanthine (ortholog); 4,4'-sulfonyldiphenol (ortholog); aristolochic acid A (ortholog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

AABR07002093.1; hypothetical protein LOC691722; LOC691722; uncharacterized protein C19orf18 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	82,094,513 - 82,122,109 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	82,098,305 - 82,122,119 (+)	Ensembl				GRCr8
mRatBN7.2	1	73,022,324 - 73,049,934 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	73,025,988 - 73,049,736 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	66,182,586 - 66,216,335 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	66,189,220 - 66,212,418 (-)	NCBI			rn6	Rnor6.0
Rnor_5.0	1	66,984,866 - 67,012,276 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	72,609,254 - 72,632,627 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	60,737,677 - 60,770,419 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

substance-related disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

aristolochic acid A (ISO)

benzo[e]pyrene (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

dexamethasone (ISO)

indometacin (ISO)

methapyrilene (ISO)

methylmercury chloride (ISO)

nickel atom (ISO)

propanal (ISO)

quercetin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19056867

Genomics

Comparative Map Data

C1h19orf18
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	82,094,513 - 82,122,109 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	82,098,305 - 82,122,119 (+)	Ensembl				GRCr8
mRatBN7.2	1	73,022,324 - 73,049,934 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	73,025,988 - 73,049,736 (+)	Ensembl				mRatBN7.2
Rnor_6.0	1	66,182,586 - 66,216,335 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	66,189,220 - 66,212,418 (-)	NCBI			rn6	Rnor6.0
Rnor_5.0	1	66,984,866 - 67,012,276 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	72,609,254 - 72,632,627 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	60,737,677 - 60,770,419 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

C19orf18
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	57,958,437 - 57,974,534 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	57,958,437 - 57,974,534 (-)	Ensembl			hg38	GRCh38
GRCh37	19	58,469,805 - 58,485,902 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	63,161,617 - 63,177,716 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	19	63,161,618 - 63,177,714	NCBI
Celera	19	55,513,281 - 55,529,383 (-)	NCBI		Celera
Cytogenetic Map	19	q13.43	NCBI
HuRef	19	54,780,952 - 54,797,050 (-)	NCBI		HuRef
CHM1_1	19	58,463,655 - 58,479,768 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	61,055,384 - 61,071,478 (-)	NCBI		T2T-CHM13v2.0

2900092C05Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	12,246,391 - 12,290,250 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	12,246,444 - 12,290,250 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	7	12,512,464 - 12,556,323 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	12,512,517 - 12,556,323 (+)	Ensembl			mm10	GRCm38
MGSCv37	7	13,097,900 - 13,141,672 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	7	11,418,400 - 11,462,162 (+)	NCBI		MGSCv36	mm8
Celera	7	10,142,310 - 10,179,101 (+)	NCBI		Celera
Cytogenetic Map	7	A1	NCBI
cM Map	7	7.53	NCBI

CUNH19orf18
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955584	682,191 - 690,357 (-)	NCBI	ChiLan1.0	ChiLan1.0

C20H19orf18
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	64,237,666 - 64,254,850 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	66,026,028 - 66,042,144 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	54,970,298 - 54,986,734 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	63,797,775 - 63,814,224 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	63,797,775 - 63,814,224 (-)	Ensembl			panPan2	panpan1.1

C1H19orf18
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	99,927,084 - 99,939,379 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	100,323,757 - 100,336,040 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	100,569,972 - 100,582,497 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	100,570,525 - 100,582,514 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	100,214,896 - 100,227,186 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	99,927,093 - 99,939,375 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	100,682,416 - 100,694,699 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

CUNH19orf18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	177,187 - 191,181 (+)	NCBI		HiC_Itri_2

C6H19orf18
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	6	62,674,571 - 62,689,994 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	57,272,003 - 57,282,879 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

C6H19orf18
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	50,280,784 - 50,301,860 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666045	3,538,137 - 3,558,063 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

C2H19orf18
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	174,047,242 - 174,054,761 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in C1h19orf18
54 total Variants

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331732	Srn4	Serum renin concentration QTL 4	4.467		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	1	43457837	87558729	Rat
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
1331792	Rf29	Renal function QTL 29	4.589		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	1	43457837	87558729	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
8552900	Pigfal1	Plasma insulin-like growth factor 1 level QTL 1	7.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	42122968	87122968	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	81269860	99645535	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1331778	Rf28	Renal function QTL 28	4.66		urine potassium amount (VT:0010539)	urine potassium excretion rate (CMO:0000761)	1	43457837	87558729	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
4889962	Bss94	Bone structure and strength QTL 94	3.8		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	51909206	91302615	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
9589820	Insglur3	Insulin/glucose ratio QTL 3	10.75	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	1	43509952	88509952	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	52891222	109116986	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	42122968	87122968	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat
8552948	Pigfal11	Plasma insulin-like growth factor 1 level QTL 11	4.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	hemolymphoid system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	sensory system	visual system
6	1	15	41	16	74	41	11	40	27	30	14	14

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001432675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432676	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432679	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001432687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006223005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228140	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228141	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100761	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277407	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063277451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000026074 ⟹ ENSRNOP00000026074

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	82,098,305 - 82,121,628 (+)	Ensembl
mRatBN7.2 Ensembl	1	73,025,988 - 73,049,445 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096365 ⟹ ENSRNOP00000081660

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	82,098,305 - 82,122,119 (+)	Ensembl
mRatBN7.2 Ensembl	1	73,025,988 - 73,049,736 (+)	Ensembl

RefSeq Acc Id:

XM_006228140 ⟹ XP_006228202

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,097,565 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,025,370 - 73,049,934 (+)	NCBI
Rnor_6.0	1	66,182,586 - 66,213,179 (-)	NCBI
Rnor_5.0	1	66,984,866 - 67,012,276 (-)	NCBI

Sequence:

show sequence

GGTGCCTCTTCACAGCAGTAAAACCCTAACTAAGACATAAACTATCAGTTTGAGGTTTGGGGAA
CATGAGGAGCAGCAGTAGGGAAGAAAGGAAGTAGTACGTGATGTAATTATATTTAAGTCTAAGA
GGAATTAAGTTTAAAGAAGGGAGTTGGCAGAAGAATTATGATAAAGGTACTTGAATATTTATGT
ATGCTTTATATGTAATATATTTCCATAAGCATAAGAAATTGTGAAAGAATAAATGGTTTAGAAT
CTAGACTTTAAAAAAAAAACTGATCCTGTACTCTGCTACTTTATGTAGCCCTCTAGGTTTTATT
GCTGTGGTTAGTTTGTTTTGCCACAAGGTCTCACGTAGCTCAAGCTGGCTTTGAACTCCCTAAC
TTGTTATATTGCTAAGAATGGCCTCAAACTGCTCTACCCACTAAATGCTGGGATTACACATGTG
TGATGTCACAGCTAGCTTCTGTCACTTCTTCCTCAGTACCACACTGAACCAAGATTCCTGTCTG
CCTTCTCCCTAATCTGCATTTTCCCTGAAGGCTTGAATCTGCTCTCATCCCTGTCTGCCTCACA
GTTAGGACATCTGGCTTATTTCAGTCACCTTGACTGCCCAAATTCTGTGAAGGAATTCTGGGGC
AGTTAAGCTGACCTCACAGTGGAGGGCTCTAATTCGGAACCCAAACATTCCACTGCTCCAGCCA
CTGGGCTGTTAGATAAGTATTTCTTGTGTATGAAAAAGAACTTATAATGTTAGAGGAATGCACA
AGGTTTGGAGTTCTGTGTTTTTATTTTGGTTTTTATTGGAAGGCCTACTTCATGTCTGCTTCCC
TTACACTGTTGAGAAAACAACAGACTCATCAGGGAGTAGACAGTTAGAAACATCTGAAACTTCT
TCTATGGGACAATCCAGAGGCTTCCTTTCAATACTTCGACCAACACAAGTAAAAATCCCAGCAC
AGAAAAGTGATGCACTTAATCCTTCAGAGACCATTCATATGTTCGCAGCAGATCCAAGCCCCAG
ATCTAATTCTTGGAATGAAGTAAGTCCACATAGACCTGGTCTTGTTCATGTAATTTCAGTTTCA
AGTATAGCCTTTGTCGTTGCCCTGTTATGTGGGCTCATGATCTCCTATGTGATACATCGACTGG
TAAAAGCTGAGGAAAAACAGCAGCTTGCAATGTTGTATGAAAATGTCGAGATTCCACTTTTAGA
AGAGAAAGATTCTTCTGAAGATGAGTCTTCTCAGCTGGATCCAGAGAATGAGGAGCTGGGAAAA
TTCATTGGCTCAGTTATTAAAACAAAAATAATGGAAAACATTAAGAAGAAAATGAAGGAAGAGC
AAAATGTATTGAAGGGAAACACATCAGAGAATTTCAGTTGTATTGAAAAAGTAGAGACGCATGA
AAAATTGGATAAAGATGGAAACTCAGGAAATCTGTGAAAACAAAAGAAAGGTGTACCATGTGCT
AGACAATATGGAGATAAAACTGCAGAGATAACAGAAAACTGAGAACACGAACAGGACTTCTAAA
GAACCTTGTCCAAGAATGTTCTACAGAAAGAAACGTGAGCAGCATATAGTGGAAAATAAATTCA
TATGATACCAAAACTCTTGCTTTTTAGCCATGATAGTCCATGAATAATTTAAGTGGAATATAGA
AAACAGACCAAGTTCTTTAACAAAGAAAGACAGGCTGTGAGGATTTTGTTCTCTGCCTCCAGAC
TAGAAAGATTGCTTAATCCTTTTTGGGGGGAGGGGTCTTCCTGAATGTGATAGCAAAATATTTT
CATTAAATAAAACTTTCTAAGTGATGTTTCTATCAGATCTGGTCACTTAATCTCCATTTTATAC
ATGAAGACACTGAGGATATCATAATGAATATAGGACTAGATTAAGAGGTGGCCATTTCTGTTGG
TCCTCAGCTCTGATGAGGGAACTTGACCTGCAGGGGTGGAGTATAAAACGAGTTCATATATGCA
GTAAGCTTGAGTAGCCAATAGCTATAGGAAGATGGAAGAGATAAACAGTTCAGTCTTTTGACCT
TTCAACACAATACCATCATGGACAAAGTTCATGTTGGAGAATCAAGTAACAAAATGTCACACCA
CACCACACCCCCTAAAAAACCAATCTTAGTTTTTAAGTGCATTGACTGCACTTCCCATTCATTA
CCATCCTCAGTACAATTGCTTTGAAAAACAGTCTGGTCATTCCTAGAAAGGTAAACATGAAGTT
ACTACATGATGTAGCATATCTACTCCTAGATATACATATCTATACAAAAACTTGCATGTTTATA
ACAGTATAGTATGGCCAGGAATGAGGGACAATGCCTATAGTCTCAGCACTTGAGAGGTGGTCAC
AATAAAATTATGAGTATGAGTCAGCTTGCATTATACAGAGAACTGTTGTTTCATTAACTGATAA
ACATATGAACAAACTGACTTATCCATACAGTGGATTATATCTCGGCAATTTAATGAATGAACTA
ATGATATATATTTCACATATGTGTGGTCATAATGAAACCATTCTACTGCATGTAAGAAACCTTA
CACCTACCTGAGATTTGCTTACATGAAACACCTATAAAAGGCAAAGTCTGTAGTTACAAAGTAG
GTTACGGATTCTAGGGAGCTGCAGATGAGGAATGGAGGGGCTGCCTGGGTGTAAGTTCCAGCCA
ATCAGTGTGGAAAATTGAAGAGCTTCAGACGAACAACCATGGTTTCTCACATGTCCCTAGTTCA
GTATGCATTCTCTTTACTGTGATGATTGTACCCTTGATATACAAATACAGTAATTGAAAGGCAG
CTATTCTGGTATCAAATTGTCTTGGGCCCTGACTGTGTCAGTAGAGGACAATATCCAGCTGATA
GTTGTTCCAATAGAACAAACTATATGCTCTTCTTCTAGTGCTGTATTTCAAGACTGTATTTTTT
TTAACTCATGGGCCCCATCCATTCCATCTTTATAGGCAAATTTTGTTAGGTAACCCCATCCTGT
ATCAGAACCCAATTCCCTGATTCTGGAAATTGTGCCATGGACCCAGTTCTTGAGTTTATCAGTC
ACCCATCCCCTCCCTCTAAATTCATCAAGCACTTAAGTGACATTTCCTTTTAGGTTGTTGGCAT
GGAACAGATGTAGAAGAGCCCAGTTGGCATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT
TATTTGGCAGAATATTTCTGCACAGAACGTCACCAGTTGGACCTTTCAAGGGCTGTTCTTTTTG
GGAGGCCTATTATTGTGTGACATCCAGCCCATTCTTAAGAAAAATTTTGTACTTGGCTGAGAAC
CAGCATCATGAATTGAAACTACACCTTGATGTAACATCTGGCAAACAATTACAATTGCTACATA
TCTGCATCAGCACCAAAAGCAGCATATTTGGGAAGAGCACCCCAAAAGCAATGTGAGCAACACT
CATTGCTGAATAAAGATAAGCCAAAGATTCCAGGTGTCTGAGAAGCCATCTTCTAGGAAAGAGA
CTAGGAAGGACTTCCTCTTCAGCACAGATCATTTCCAGCAACAGGTTACCAGCACACATGAGAA
TTCTTACCACACATCTGAGAGTATGTTGGCCTTTTCGACTGAGTCATTACAACTGGGGACAGTA
TGAAATTTTTCAGCTGCCAACCAGTTGTCGTCTTCATTAGGGAAGGATGTTACATGTATAATAT
ATTATACAATATAATATAAGAAATCTTGTAGTACAGGCTGTGGCCTCAGGTCATTCAAGAGTTC
ACACTTCAGTAAAGCCATATGTATAAGGAGACTGAATCAAATCCTCTAAGTAAAAGCCTAGCCT
CATTACCCACAAAGAAGTGTGCATGGGTGAAAGACCTCATCAATGTGATGGATGTGGTAATTAT
TTAGTAAGAAGAGAAAAAAGAAATTATTTTTAGAGAGAGAATTTGCACTGGTGAGAGGTCTTAT
GTGTGTTGTGAATGTGGGAAATTCTTTACCTAAAACTGTCACTATTTTTTTTACTTTCTCCATA
CATTACACCCTGATCACAGTTTCCCCTTCCCCATGTGCCCTCCATGTCTCTTCTTCTCCAGATT
ATTCCTCCTCTGTTTCCCTTTAGAAAAAGAGCAGGCATCCTAATGGTATTAACCAAGCATGGCA
TGACAAGTTACAATAAGTTTAGGCACATACCCTCAAATTAAGGCTGTCAAGGCAATCCATTAGG
AAAAGGGGGGGTTGACAAAAGAGAGACACTCCTGTTTCCTCTGTTAGGAGTCGCACAAGAACAA
TAAGCTATACAGCCATTGCATATATACAGAGGATCTAGATCAGATCCATGCTGACTCCCTAACT
GTTGCTTCAGTCTCTGTGAGCCCCTATCAGCCCTGATTAGTTGATTCTATGGGTCATATTCTTG
TAAAGTCCTTGACCCCTCTGGCTCATACAATCCCTCCTACCCTTCTTCCATAGAATTCCCCAGA
GCCCCACCTAATGTTTGCCTATGGGTCTCTGCATCTGATCCTTTCACAAAATTGTCACTTCTTA
AATGACCAGACAGTTCATACTAGAAAATATGAGAAATTCTTTACATTCCTATCTCTTCTAACAC
CAGAGAATTCATAATGGTGCAAGATCACATGAGTGTGATAAATATGGAAAAATGTTTAACAAGA
AATCCAATCTCATAAACAAAATAGTTTACACTGAAGAAAGATCTTATCAATGCACCAAACATGT
ACCCTTTAGCAAGTGCTCTAACCCCAGTAGTCACTGGAGAGGTCGCATGGGAAAAAGGCCTTGT
GACTGTTATAGGCCTTTAGCTACCACTCTAGTTTTATTAAACATGAAAGAGTTCACACCAGAGA
AAGGTCTTTTGTGTGAAGTGAGTGTGCAGAGTCATTAACCTTCAACTACAATCACTTAAGACAC
TAGCATGTACACAGGTCTAAAGGATGTTTGGTGGCAAAGATGGGGTTGTTGTAACTGAAATATA
CACTCTCAAAATGCCATTGCTGTCAGAGGTGTAGCTAAGTGGTAGAGTGTTTTCCTGGTATGTA
TGAAGTTCTAGGTTTGATAGCTCGCACTTGGGAAAGAAAGTTAAATCTCTAATCCTTCACATGG
ATTTATTTATATATAGGGCCTTTAATGTTAATGAGTAACATGTTTCAGCAATTGATAGTGAATA
CTGCTCTTGTAGAAGACACAGGTTCTGTTCCCCAGCAATCTATCAACTGCTTCAATGTCAGTTC
CAGGGGAGCTAATCCTATTTTCTAGACATTGTGGGCATCATAACTAACCTCAACTCATGAGAGA
AAGATCTTATGAATATAGTGAATCGGCACATGTATACACACTTAAAAATAAAAATAAATTTTGA
AAAAAGAAGGTAAGATTGAATGAAGTTAGGATGGTGTGTTCTAATCCAGTAGATAGATGTTCTT
ACAAAGAATATGACACTTGGAGGTTCTGTGAATATGCACAAAGCAATAGCAGTACAACAGGGCA
AGATGTTTGCACATCGGGAAGCACTCTGACGAGGACATGACTGTGCTGATGGCTGTATCACAGA
ATTCTATAATCCAGGACTACCATAAATTTTATTGTGTAAGCCAACCAGTTTAACATTTTGTGGC
ACTCTGAGCCAATGTAGTTCCTTTTATTTATAACAGTAAAAATGAATAGTATATATATTGCAGT
TAAGTTTTGTCTTCTCCAAAAAGATTAGAGAATGTTCTCTTAAGTGGAGGTGTGGGCCAGTCAT
GATGTTGTGTGAATAAAAAATAAATAACATGCTCTAATGAGGGGAACAGGTAGCATAACTGCAG
ATAAATATTTACTTCTCCCTCCATTCCTCTGAATCCTGTCCCTAGTCTCATCTCTGGCTCTGCA
GTAGAACACCTGCTGAGGTCTCCTTTCCCCTTTTCCCCCACCTCCAGAGGATCATACGGATCAT
TCCCTCCTAACCTCCCTTCCCTAACTCATTGTTTTATTCCAGCCCTGAACTCCAGCAGATACTC
CTTAGGAACACACAGGGCACTCTGACTTGGGAAGGAAGTAGTCTAATTGTGGCTCTTCAATTCT
ACAATTTTATATCTAGAATTATCTCTCCATTCCTCTGAGTCCCATTTTTCAGTCTCATTCCCAG
ATATGTAGCAAACATTCTATTTTGGCCTGTCTTCACTCTTTGTCCCCATTCCCAGGAGACTAAG
CAGATTCTGGCAGAACATCCATTTTTTTCTCCTGCCTGCAGATTTTAATACCTACATCCCATCC
TTATTCCTAAGTGTCAGCTCCCAATATCCAGAAATACATTTTAACTGGAACCTCCAGTGACCAC
ATTTATCAAGACAGAAGAATATCCTATTAGGCAAAACACAGCCACCACACTCCCCCAAGAGCCA
GAAAGGAAACAGAAACCTAGAAACAACAACCAGAAAACAAAGCAAAACATCCACCCAAAAAAAG
ACCAAATACAAACACCTAGCAGTACAATCTTCCTAATATCAAATGCTAAGAAGCCAGCATAAAA
GACAATCAAGGGGTAGAAAGATGAATCAGTGATTAGAAGCACTGGCTGCTCTTTCAGAAGACTG
GGGTTCAATTACCAGCACACAAATGTCACAACAGTCTGAAACTCCAGTTCCAGTGATC

hide sequence

RefSeq Acc Id:

XM_006228141 ⟹ XP_006228203

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,094,513 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,022,324 - 73,049,934 (+)	NCBI
Rnor_6.0	1	66,182,586 - 66,216,335 (-)	NCBI
Rnor_5.0	1	66,984,866 - 67,012,276 (-)	NCBI

Sequence:

show sequence

TCTTAGATCTACTACTGCTTTTTTTCTAGGTCAGTATAATTCCTTACTACATTATAAATATTAA
TCTTATGCCCACAGATAATTGGAGCTATCATGTCTCATCAAAGATTTTCTTTACAGCAAATAAC
AGACAGGTACAGAAAGCCACAGCTGGACATAGAGCAAAGATCAACAAATGAGAAAAGTGATGCA
CTTAATCCTTCAGAGACCATTCATATGTTCGCAGCAGATCCAAGCCCCAGATCTAATTCTTGGA
ATGAAGTAAGTCCACATAGACCTGGTCTTGTTCATGTAATTTCAGTTTCAAGTATAGCCTTTGT
CGTTGCCCTGTTATGTGGGCTCATGATCTCCTATGTGATACATCGACTGGTAAAAGCTGAGGAA
AAACAGCAGCTTGCAATGTTGTATGAAAATGTCGAGATTCCACTTTTAGAAGAGAAAGATTCTT
CTGAAGATGAGTCTTCTCAGCTGGATCCAGAGAATGAGGAGCTGGGAAAATTCATTGGCTCAGT
TATTAAAACAAAAATAATGGAAAACATTAAGAAGAAAATGAAGGAAGAGCAAAATGTATTGAAG
GGAAACACATCAGAGAATTTCAGTTGTATTGAAAAAGTAGAGACGCATGAAAAATTGGATAAAG
ATGGAAACTCAGGAAATCTGTGAAAACAAAAGAAAGGTGTACCATGTGCTAGACAATATGGAGA
TAAAACTGCAGAGATAACAGAAAACTGAGAACACGAACAGGACTTCTAAAGAACCTTGTCCAAG
AATGTTCTACAGAAAGAAACGTGAGCAGCATATAGTGGAAAATAAATTCATATGATACCAAAAC
TCTTGCTTTTTAGCCATGATAGTCCATGAATAATTTAAGTGGAATATAGAAAACAGACCAAGTT
CTTTAACAAAGAAAGACAGGCTGTGAGGATTTTGTTCTCTGCCTCCAGACTAGAAAGATTGCTT
AATCCTTTTTGGGGGGAGGGGTCTTCCTGAATGTGATAGCAAAATATTTTCATTAAATAAAACT
TTCTAAGTGATGTTTCTATCAGATCTGGTCACTTAATCTCCATTTTATACATGAAGACACTGAG
GATATCATAATGAATATAGGACTAGATTAAGAGGTGGCCATTTCTGTTGGTCCTCAGCTCTGAT
GAGGGAACTTGACCTGCAGGGGTGGAGTATAAAACGAGTTCATATATGCAGTAAGCTTGAGTAG
CCAATAGCTATAGGAAGATGGAAGAGATAAACAGTTCAGTCTTTTGACCTTTCAACACAATACC
ATCATGGACAAAGTTCATGTTGGAGAATCAAGTAACAAAATGTCACACCACACCACACCCCCTA
AAAAACCAATCTTAGTTTTTAAGTGCATTGACTGCACTTCCCATTCATTACCATCCTCAGTACA
ATTGCTTTGAAAAACAGTCTGGTCATTCCTAGAAAGGTAAACATGAAGTTACTACATGATGTAG
CATATCTACTCCTAGATATACATATCTATACAAAAACTTGCATGTTTATAACAGTATAGTATGG
CCAGGAATGAGGGACAATGCCTATAGTCTCAGCACTTGAGAGGTGGTCACAATAAAATTATGAG
TATGAGTCAGCTTGCATTATACAGAGAACTGTTGTTTCATTAACTGATAAACATATGAACAAAC
TGACTTATCCATACAGTGGATTATATCTCGGCAATTTAATGAATGAACTAATGATATATATTTC
ACATATGTGTGGTCATAATGAAACCATTCTACTGCATGTAAGAAACCTTACACCTACCTGAGAT
TTGCTTACATGAAACACCTATAAAAGGCAAAGTCTGTAGTTACAAAGTAGGTTACGGATTCTAG
GGAGCTGCAGATGAGGAATGGAGGGGCTGCCTGGGTGTAAGTTCCAGCCAATCAGTGTGGAAAA
TTGAAGAGCTTCAGACGAACAACCATGGTTTCTCACATGTCCCTAGTTCAGTATGCATTCTCTT
TACTGTGATGATTGTACCCTTGATATACAAATACAGTAATTGAAAGGCAGCTATTCTGGTATCA
AATTGTCTTGGGCCCTGACTGTGTCAGTAGAGGACAATATCCAGCTGATAGTTGTTCCAATAGA
ACAAACTATATGCTCTTCTTCTAGTGCTGTATTTCAAGACTGTATTTTTTTTAACTCATGGGCC
CCATCCATTCCATCTTTATAGGCAAATTTTGTTAGGTAACCCCATCCTGTATCAGAACCCAATT
CCCTGATTCTGGAAATTGTGCCATGGACCCAGTTCTTGAGTTTATCAGTCACCCATCCCCTCCC
TCTAAATTCATCAAGCACTTAAGTGACATTTCCTTTTAGGTTGTTGGCATGGAACAGATGTAGA
AGAGCCCAGTTGGCATTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTATTTGGCAGAATA
TTTCTGCACAGAACGTCACCAGTTGGACCTTTCAAGGGCTGTTCTTTTTGGGAGGCCTATTATT
GTGTGACATCCAGCCCATTCTTAAGAAAAATTTTGTACTTGGCTGAGAACCAGCATCATGAATT
GAAACTACACCTTGATGTAACATCTGGCAAACAATTACAATTGCTACATATCTGCATCAGCACC
AAAAGCAGCATATTTGGGAAGAGCACCCCAAAAGCAATGTGAGCAACACTCATTGCTGAATAAA
GATAAGCCAAAGATTCCAGGTGTCTGAGAAGCCATCTTCTAGGAAAGAGACTAGGAAGGACTTC
CTCTTCAGCACAGATCATTTCCAGCAACAGGTTACCAGCACACATGAGAATTCTTACCACACAT
CTGAGAGTATGTTGGCCTTTTCGACTGAGTCATTACAACTGGGGACAGTATGAAATTTTTCAGC
TGCCAACCAGTTGTCGTCTTCATTAGGGAAGGATGTTACATGTATAATATATTATACAATATAA
TATAAGAAATCTTGTAGTACAGGCTGTGGCCTCAGGTCATTCAAGAGTTCACACTTCAGTAAAG
CCATATGTATAAGGAGACTGAATCAAATCCTCTAAGTAAAAGCCTAGCCTCATTACCCACAAAG
AAGTGTGCATGGGTGAAAGACCTCATCAATGTGATGGATGTGGTAATTATTTAGTAAGAAGAGA
AAAAAGAAATTATTTTTAGAGAGAGAATTTGCACTGGTGAGAGGTCTTATGTGTGTTGTGAATG
TGGGAAATTCTTTACCTAAAACTGTCACTATTTTTTTTACTTTCTCCATACATTACACCCTGAT
CACAGTTTCCCCTTCCCCATGTGCCCTCCATGTCTCTTCTTCTCCAGATTATTCCTCCTCTGTT
TCCCTTTAGAAAAAGAGCAGGCATCCTAATGGTATTAACCAAGCATGGCATGACAAGTTACAAT
AAGTTTAGGCACATACCCTCAAATTAAGGCTGTCAAGGCAATCCATTAGGAAAAGGGGGGGTTG
ACAAAAGAGAGACACTCCTGTTTCCTCTGTTAGGAGTCGCACAAGAACAATAAGCTATACAGCC
ATTGCATATATACAGAGGATCTAGATCAGATCCATGCTGACTCCCTAACTGTTGCTTCAGTCTC
TGTGAGCCCCTATCAGCCCTGATTAGTTGATTCTATGGGTCATATTCTTGTAAAGTCCTTGACC
CCTCTGGCTCATACAATCCCTCCTACCCTTCTTCCATAGAATTCCCCAGAGCCCCACCTAATGT
TTGCCTATGGGTCTCTGCATCTGATCCTTTCACAAAATTGTCACTTCTTAAATGACCAGACAGT
TCATACTAGAAAATATGAGAAATTCTTTACATTCCTATCTCTTCTAACACCAGAGAATTCATAA
TGGTGCAAGATCACATGAGTGTGATAAATATGGAAAAATGTTTAACAAGAAATCCAATCTCATA
AACAAAATAGTTTACACTGAAGAAAGATCTTATCAATGCACCAAACATGTACCCTTTAGCAAGT
GCTCTAACCCCAGTAGTCACTGGAGAGGTCGCATGGGAAAAAGGCCTTGTGACTGTTATAGGCC
TTTAGCTACCACTCTAGTTTTATTAAACATGAAAGAGTTCACACCAGAGAAAGGTCTTTTGTGT
GAAGTGAGTGTGCAGAGTCATTAACCTTCAACTACAATCACTTAAGACACTAGCATGTACACAG
GTCTAAAGGATGTTTGGTGGCAAAGATGGGGTTGTTGTAACTGAAATATACACTCTCAAAATGC
CATTGCTGTCAGAGGTGTAGCTAAGTGGTAGAGTGTTTTCCTGGTATGTATGAAGTTCTAGGTT
TGATAGCTCGCACTTGGGAAAGAAAGTTAAATCTCTAATCCTTCACATGGATTTATTTATATAT
AGGGCCTTTAATGTTAATGAGTAACATGTTTCAGCAATTGATAGTGAATACTGCTCTTGTAGAA
GACACAGGTTCTGTTCCCCAGCAATCTATCAACTGCTTCAATGTCAGTTCCAGGGGAGCTAATC
CTATTTTCTAGACATTGTGGGCATCATAACTAACCTCAACTCATGAGAGAAAGATCTTATGAAT
ATAGTGAATCGGCACATGTATACACACTTAAAAATAAAAATAAATTTTGAAAAAAGAAGGTAAG
ATTGAATGAAGTTAGGATGGTGTGTTCTAATCCAGTAGATAGATGTTCTTACAAAGAATATGAC
ACTTGGAGGTTCTGTGAATATGCACAAAGCAATAGCAGTACAACAGGGCAAGATGTTTGCACAT
CGGGAAGCACTCTGACGAGGACATGACTGTGCTGATGGCTGTATCACAGAATTCTATAATCCAG
GACTACCATAAATTTTATTGTGTAAGCCAACCAGTTTAACATTTTGTGGCACTCTGAGCCAATG
TAGTTCCTTTTATTTATAACAGTAAAAATGAATAGTATATATATTGCAGTTAAGTTTTGTCTTC
TCCAAAAAGATTAGAGAATGTTCTCTTAAGTGGAGGTGTGGGCCAGTCATGATGTTGTGTGAAT
AAAAAATAAATAACATGCTCTAATGAGGGGAACAGGTAGCATAACTGCAGATAAATATTTACTT
CTCCCTCCATTCCTCTGAATCCTGTCCCTAGTCTCATCTCTGGCTCTGCAGTAGAACACCTGCT
GAGGTCTCCTTTCCCCTTTTCCCCCACCTCCAGAGGATCATACGGATCATTCCCTCCTAACCTC
CCTTCCCTAACTCATTGTTTTATTCCAGCCCTGAACTCCAGCAGATACTCCTTAGGAACACACA
GGGCACTCTGACTTGGGAAGGAAGTAGTCTAATTGTGGCTCTTCAATTCTACAATTTTATATCT
AGAATTATCTCTCCATTCCTCTGAGTCCCATTTTTCAGTCTCATTCCCAGATATGTAGCAAACA
TTCTATTTTGGCCTGTCTTCACTCTTTGTCCCCATTCCCAGGAGACTAAGCAGATTCTGGCAGA
ACATCCATTTTTTTCTCCTGCCTGCAGATTTTAATACCTACATCCCATCCTTATTCCTAAGTGT
CAGCTCCCAATATCCAGAAATACATTTTAACTGGAACCTCCAGTGACCACATTTATCAAGACAG
AAGAATATCCTATTAGGCAAAACACAGCCACCACACTCCCCCAAGAGCCAGAAAGGAAACAGAA
ACCTAGAAACAACAACCAGAAAACAAAGCAAAACATCCACCCAAAAAAAGACCAAATACAAACA
CCTAGCAGTACAATCTTCCTAATATCAAATGCTAAGAAGCCAGCATAAAAGACAATCAAGGGGT
AGAAAGATGAATCAGTGATTAGAAGCACTGGCTGCTCTTTCAGAAGACTGGGGTTCAATTACCA
GCACACAAATGTCACAACAGTCTGAAACTCCAGTTCCAGTGATC

hide sequence

RefSeq Acc Id:

XM_039100758 ⟹ XP_038956686

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,097,560 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,025,366 - 73,049,934 (+)	NCBI

RefSeq Acc Id:

XM_039100761 ⟹ XP_038956689

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,094,638 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,023,177 - 73,049,934 (+)	NCBI

RefSeq Acc Id:

XM_039100773 ⟹ XP_038956701

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,098,558 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,026,369 - 73,049,934 (+)	NCBI

RefSeq Acc Id:

XM_039100778 ⟹ XP_038956706

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,107,128 - 82,122,109 (+)	NCBI
mRatBN7.2	1	73,034,937 - 73,049,934 (+)	NCBI

RefSeq Acc Id:

XM_063277407 ⟹ XP_063133477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,097,556 - 82,122,109 (+)	NCBI

RefSeq Acc Id:

XM_063277422 ⟹ XP_063133492

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,097,560 - 82,122,109 (+)	NCBI

RefSeq Acc Id:

XM_063277443 ⟹ XP_063133513

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,094,631 - 82,122,109 (+)	NCBI

RefSeq Acc Id:

XM_063277445 ⟹ XP_063133515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,098,299 - 82,122,109 (+)	NCBI

RefSeq Acc Id:

XM_063277451 ⟹ XP_063133521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	82,107,126 - 82,122,109 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001419604	(Get FASTA)	NCBI Sequence Viewer
	NP_001419605	(Get FASTA)	NCBI Sequence Viewer
	NP_001419606	(Get FASTA)	NCBI Sequence Viewer
	NP_001419607	(Get FASTA)	NCBI Sequence Viewer
	NP_001419608	(Get FASTA)	NCBI Sequence Viewer
	NP_001419609	(Get FASTA)	NCBI Sequence Viewer
	NP_001419610	(Get FASTA)	NCBI Sequence Viewer
	NP_001419611	(Get FASTA)	NCBI Sequence Viewer
	NP_001419612	(Get FASTA)	NCBI Sequence Viewer
	NP_001419613	(Get FASTA)	NCBI Sequence Viewer
	NP_001419614	(Get FASTA)	NCBI Sequence Viewer
	NP_001419615	(Get FASTA)	NCBI Sequence Viewer
	NP_001419616	(Get FASTA)	NCBI Sequence Viewer
	XP_006228202	(Get FASTA)	NCBI Sequence Viewer
	XP_006228203	(Get FASTA)	NCBI Sequence Viewer
	XP_038956686	(Get FASTA)	NCBI Sequence Viewer
	XP_038956689	(Get FASTA)	NCBI Sequence Viewer
	XP_038956701	(Get FASTA)	NCBI Sequence Viewer
	XP_038956706	(Get FASTA)	NCBI Sequence Viewer
	XP_063133477	(Get FASTA)	NCBI Sequence Viewer
	XP_063133492	(Get FASTA)	NCBI Sequence Viewer
	XP_063133513	(Get FASTA)	NCBI Sequence Viewer
	XP_063133515	(Get FASTA)	NCBI Sequence Viewer
	XP_063133521	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL75784	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000026074.5
	ENSRNOP00000081660
	ENSRNOP00000081660.1

RefSeq Acc Id:	XP_006228203 ⟸ XM_006228141
- Peptide Label:	isoform X5
- Sequence:	show sequence MSHQRFSLQQITDRYRKPQLDIEQRSTNEKSDALNPSETIHMFAADPSPRSNSWNEVSPHRPGL VHVISVSSIAFVVALLCGLMISYVIHRLVKAEEKQQLAMLYENVEIPLLEEKDSSEDESSQLDP ENEELGKFIGSVIKTKIMENIKKKMKEEQNVLKGNTSENFSCIEKVETHEKLDKDGNSGNL hide sequence

RefSeq Acc Id:

XP_006228202 ⟸ XM_006228140

- Peptide Label:

isoform X1

- Sequence:

show sequence

MHKVWSSVFLFWFLLEGLLHVCFPYTVEKTTDSSGSRQLETSETSSMGQSRGFLSILRPTQVKI
PAQKSDALNPSETIHMFAADPSPRSNSWNEVSPHRPGLVHVISVSSIAFVVALLCGLMISYVIH
RLVKAEEKQQLAMLYENVEIPLLEEKDSSEDESSQLDPENEELGKFIGSVIKTKIMENIKKKMK
EEQNVLKGNTSENFSCIEKVETHEKLDKDGNSGNL

hide sequence

RefSeq Acc Id:	XP_038956689 ⟸ XM_039100761
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038956686 ⟸ XM_039100758
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038956701 ⟸ XM_039100773
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038956706 ⟸ XM_039100778
- Peptide Label:	isoform X10

Ensembl Acc Id:

ENSRNOP00000026074 ⟸ ENSRNOT00000026074

Ensembl Acc Id:

ENSRNOP00000081660 ⟸ ENSRNOT00000096365

RefSeq Acc Id:	XP_063133513 ⟸ XM_063277443
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063133477 ⟸ XM_063277407
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063133492 ⟸ XM_063277422
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063133515 ⟸ XM_063277445
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063133521 ⟸ XM_063277451
- Peptide Label:	isoform X8

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4ADP8-F1-model_v2	AlphaFold	D4ADP8	1-163	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1595996	AgrOrtholog
BioCyc Gene	G2FUF-60730	BioCyc
Ensembl Genes	ENSRNOG00000019280	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000026074.6	UniProtKB/TrEMBL
	ENSRNOT00000096365	ENTREZGENE
	ENSRNOT00000096365.2	UniProtKB/TrEMBL
InterPro	C19orf18	UniProtKB/TrEMBL
KEGG Report	rno:691722	UniProtKB/TrEMBL
NCBI Gene	691722	ENTREZGENE
PANTHER	PTHR38000	UniProtKB/TrEMBL
	RIKEN CDNA 2900092C05 GENE	UniProtKB/TrEMBL
Pfam	DUF5534	UniProtKB/TrEMBL
PhenoGen	C1h19orf18	PhenoGen
RatGTEx	ENSRNOG00000019280	RatGTEx
UniProt	A0A8I5ZTD7	ENTREZGENE, UniProtKB/TrEMBL
	A6KQN4	ENTREZGENE, UniProtKB/TrEMBL
	D4ADP8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-24	C1h19orf18	similar to human chromosome 19 open reading frame 18	LOC691722	hypothetical protein LOC691722	Name and Symbol changed	629549	APPROVED
2022-06-02	LOC691722	hypothetical protein LOC691722	AABR07002093.1		Data merged from RGD:15003480	737654	PROVISIONAL
2019-11-08	AABR07002093.1				Symbol and Name status set to provisional	45752	PROVISIONAL
2006-11-20	LOC691722	hypothetical protein LOC691722			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD