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Gene: Catsperd (catsper channel auxiliary subunit delta) Rattus norvegicus

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Symbol:

Catsperd

Name:

catsper channel auxiliary subunit delta (Ensembl:cation channel sperm associated auxiliary subunit delta)

RGD ID:

1594167

Description:

Predicted to be involved in flagellated sperm motility and sperm capacitation. Predicted to be located in motile cilium and plasma membrane. Predicted to be part of CatSper complex. Predicted to be active in sperm principal piece. Orthologous to human CATSPERD (cation channel sperm associated auxiliary subunit delta); INTERACTS WITH bisphenol A; Cuprizon; endosulfan.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cation channel sperm associated auxiliary subunit delta; cation channel sperm-associated auxiliary subunit delta; cation channel sperm-associated protein subunit delta; catSper-delta; catSperdelta; hypothetical protein LOC680264; LOC680264; MGC189565; Tmem146; transmembrane protein 146

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	1,546,903 - 1,585,470 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	1,548,205 - 1,585,467 (+)	Ensembl				GRCr8
mRatBN7.2	9	1,459,967 - 1,498,342 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	1,460,001 - 1,498,344 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	1,894,527 - 1,932,435 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	7,244,705 - 7,281,579 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	6,199,732 - 6,237,632 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	10,390,307 - 10,428,666 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	10,390,308 - 10,427,746 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	9,387,387 - 9,425,465 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	7,018,321 - 7,052,741 (-)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP)

Butylbenzyl phthalate (ISO)

Cuprizon (EXP)

endosulfan (EXP)

ethyl methanesulfonate (ISO)

formaldehyde (ISO)

genistein (ISO)

gentamycin (EXP)

manganese(II) chloride (EXP)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

Muraglitazar (EXP)

N-nitrosodiethylamine (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

phenobarbital (ISO)

pirinixic acid (ISO)

potassium dichromate (ISO)

propiconazole (ISO)

sodium fluoride (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

troglitazone (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell differentiation (IEA)

flagellated sperm motility (IBA,ISO,ISS)

sperm capacitation (IBA,ISO,ISS)

spermatogenesis (IEA,ISO,ISS)

Cellular Component

CatSper complex (IBA,IEA,ISO,ISS)

sperm principal piece (IBA,ISO,ISS)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15632090	PMID:21224844

Genomics

Comparative Map Data

Catsperd
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	1,546,903 - 1,585,470 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	1,548,205 - 1,585,467 (+)	Ensembl				GRCr8
mRatBN7.2	9	1,459,967 - 1,498,342 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	1,460,001 - 1,498,344 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	1,894,527 - 1,932,435 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	7,244,705 - 7,281,579 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	6,199,732 - 6,237,632 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	10,390,307 - 10,428,666 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	10,390,308 - 10,427,746 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	9,387,387 - 9,425,465 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
Celera	9	7,018,321 - 7,052,741 (-)	NCBI		Celera
Cytogenetic Map	9	q11	NCBI

CATSPERD
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	5,720,637 - 5,778,734 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	5,720,637 - 5,778,734 (+)	Ensembl			hg38	GRCh38
GRCh37	19	5,720,648 - 5,778,745 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	5,671,688 - 5,729,742 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	5,658,055 - 5,716,734 (+)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	5,481,184 - 5,539,676 (+)	NCBI		HuRef
CHM1_1	19	5,720,301 - 5,778,354 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	5,707,310 - 5,765,529 (+)	NCBI		T2T-CHM13v2.0

Catsperd
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	56,933,917 - 56,971,456 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	56,935,143 - 56,971,456 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	56,626,911 - 56,664,456 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	56,628,143 - 56,664,456 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	56,767,566 - 56,803,879 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	56,335,998 - 56,349,578 (+)	NCBI		MGSCv36	mm8
Celera	17	60,972,342 - 61,008,586 (+)	NCBI		Celera
Cytogenetic Map	17	D	NCBI
cM Map	17	29.43	NCBI

Catsperd
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955495	3,663,878 - 3,711,595 (-)	NCBI	ChiLan1.0	ChiLan1.0

CATSPERD
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	10,115,163 - 10,174,109 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	9,341,339 - 9,400,316 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	4,736,106 - 4,792,440 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	5,671,346 - 5,722,150 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	5,671,403 - 5,722,095 (+)	Ensembl			panPan2	panpan1.1

CATSPERD
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	54,260,014 - 54,312,504 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	54,260,046 - 54,312,277 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	53,987,455 - 54,039,467 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	54,912,668 - 54,951,312 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
UMICH_Zoey_3.1	20	53,978,667 - 54,030,999 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	54,459,215 - 54,511,760 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	54,656,459 - 54,708,656 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Catsperd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	214,506,879 - 214,547,990 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936588	3,287,334 - 3,327,748 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CATSPERD
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	73,207,273 - 73,265,866 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	73,207,458 - 73,266,158 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	73,729,386 - 73,788,177 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CATSPERD
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	5,371,611 - 5,425,288 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023667310	1,485 - 16,140 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Catsperd
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	4,440,674 - 4,494,732 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Catsperd
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	88,012,493 - 88,039,595 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Catsperd
109 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	87
Count of miRNA genes:	80
Interacting mature miRNAs:	87
Transcripts:	ENSRNOT00000071207
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631533	Iresp3	Immunoglobin response QTL3	16.2		blood immunoglobulin E amount (VT:0002492)	serum immunoglobulin E level (CMO:0002101)	9	1	6094576	Rat
10054141	Gmadr4	Adrenal mass QTL 4	2.45	0.0074	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	9	1	21707400	Rat
9589158	Gluco65	Glucose level QTL 65	6.82	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	9	496645	45496645	Rat
7411592	Foco8	Food consumption QTL 8	7.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	496645	45496645	Rat
7207814	Bmd91	Bone mineral density QTL 91	3.5		femur size trait (VT:1000369)	femoral neck cross-sectional area (CMO:0001697)	9	1	31250552	Rat
9589055	Scfw5	Subcutaneous fat weight QTL 5	5.55	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	9	496645	45496645	Rat
1300124	Cm4	Cardiac mass QTL 4	3.55		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	9	1	41763315	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	162	91	90	59	89	59	6	350	188	11	141	79	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596639	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596640	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039084200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267710	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267712	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC169121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474092	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000071207 ⟹ ENSRNOP00000067404

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	1,548,205 - 1,585,467 (+)	Ensembl
mRatBN7.2 Ensembl	9	1,460,001 - 1,498,337 (+)	Ensembl
Rnor_6.0 Ensembl	9	10,390,308 - 10,427,746 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094106 ⟹ ENSRNOP00000094218

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	1,548,223 - 1,584,844 (+)	Ensembl
mRatBN7.2 Ensembl	9	1,463,723 - 1,498,333 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100019 ⟹ ENSRNOP00000086900

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	1,548,230 - 1,585,461 (+)	Ensembl
mRatBN7.2 Ensembl	9	1,461,095 - 1,498,344 (+)	Ensembl

RefSeq Acc Id:

NM_001134984 ⟹ NP_001128456

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,232 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,461,095 - 1,498,342 (+)	NCBI
Rnor_6.0	9	10,390,307 - 10,427,529 (-)	NCBI
Rnor_5.0	9	9,387,387 - 9,425,465 (-)	NCBI
Celera	9	7,018,321 - 7,052,741 (-)	RGD

Sequence:

show sequence

AGTTGAAGAGCGGTGTTAGCTGTGGAGAACCAGGCAGGATGCTGATGTTGATGCTAGCAGCAGT
GGCCACGGTGGTCAGGGCTCAAACAGTGTGCCGGTTTCGGACAGTGAGGACTGGGAAAGTGTTT
GCGAACCCTGTAACACTTGAAGGGGATCTGCTGTTCTACGCCTTCTCCAACACAGTTGTGGTCA
AGAACGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAGAGGGTTTTCATAACGAAAAACCG
CTTTGAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAATGGAGGTGAAAATGCCATCAATC
ACGAGTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGTGATCGATGGAAAAGTCTACAGTT
ACAACTTTATTGAGGACATCTGGAGAACAGTGAACGGTATAACAGAACCTGTCTCTCACATTAG
TGGTGACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGTTATCAAATAACCTGTTTGCATAT
TTCCGTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGATTCTCATTCG
AGCTCCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCTTCCATTTCCA
TTCTTTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCACTACCTGGAG
TACCCCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAAGTCATCATCA
AACCACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGTCCTCCAATTC
AGGCCAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTTAAATGTTGAG
CATGCCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTTTTGGTAGAAC
AAGATCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAACTGTCCAATCA
ACAATTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGAGGTCCTCACC
CCCGTTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAACGTGCAGCTCG
CTCTCATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGAGCACCATGGA
AGATAGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCATGGTACCCCGG
AAGGGCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAA
ACCTCACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATATTGAACTCCA
ACAGCAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCACGAAGCCATC
TCCTCCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCA
CGCTCATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAATCTCTGCCTG
TGCCATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCATTGAGAAGGAA
GCGTACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGACCTGATAGTATTTTACCAGTACA
AGGAACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCGTGGAAACCTGTGGTGGAACTGTG
GAAGGATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTTGAATGGAATA
GTCACCTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCTCAGAACTGGA
GCATCTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATGTCAGCTGCCA
TGAGGACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTTAGGTGGCAGG
ACAGACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTGACTGTGGTGG
ATCCATACTACAGATATTCAAGTACTGCCCAGGGATCTGCACCTGTGCTTGGCTTCGGGGCAAA
ATGAGAAGGGGGCTGCGCTCCAGAAGGGTGAAGGACCAGCCAGAGAAAATCCCACAGATAGGCA
AGAAGCCAGACATCAAGAAATAGCCAAAGACACAGGGGCGGCCCTAGACTCAAAGTGAGCCCCA
GTGAGGGGCCTTTCTCTTCCATGTGTGTCCTTGTTGGCGCTTGTTCCAATAAATTGTTAACAAC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA

hide sequence

RefSeq Acc Id:

XM_006244340 ⟹ XP_006244402

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,519 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,460,209 - 1,498,342 (+)	NCBI
Rnor_6.0	9	10,390,307 - 10,428,549 (-)	NCBI
Rnor_5.0	9	9,387,387 - 9,425,465 (-)	NCBI

Sequence:

show sequence

TAAGCTCGAGTAAACATGACGGAGGAGGCAGAACTGGTCTGCAGTCTGGATGAGGAGCGCTCCA
CCGGGGAGGGATAGGAGGAACTGGGAAGCCGGGATTTGACTGAAGACGGATTCGAGGGGCGGGG
CTTGACTTAGGGGCGTGTTCAGAGCGGTGACTCGAGAGGCGGGGCGAGACCAAGTGCAGTTGGG
ACGGGACGACTTCTTGTCGGGGAGAACGGGTGTTCCGTAGGGCACTGCTCTAGGAAGGGGGCCT
GGAGGAAGCGTGCCCCCTACCGACTCCTACAATTACTGGTCTATCCGGTCCAAGCTGTACCTTA
GAACTGCGTTCTGTTTTCTACTTTTATCTAAAACTTTTTACAGGCTGTGTTCTGAAGGCATGGA
AGAAAAGTACAGTGCACCCCTCCTTTATAATAACTTTAGTCTTTTTAGCGTTCTTTGCTGATAC
ACGACAACAGGTTTTACCATGTCTCCCTACGCAGTTGATTCCACCATCTTCACTCTACACTGGA
GGCGTGCTTGGATGGTTTTTGCCTCCCTTGTAGTATGCATGCTACAAGCTGTGCGCATGAGCGC
ACCTGTTAGCGTTGCCTTTGTTGACAGTCTTCCCTGTTTACCAAAACATTGAAGCTTCAAGGAC
ATGTACCGAGAGACCGGTGTGCAGGTTTAGGCTCCACAAAGCAGGGGGTGGATTTTATGCATGC
CCAAAGCTCTGCTACCACAACCTCGTGTGCTCATGCACGTTTTGTGGAGACTTCCTTGGGCATG
CTCACGATTCTGACTAATGGAGCTGGGAGCCTGGGTGTAACTTTCAGGTTTGAAATGTTCATGA
TCTGCTTTCATATTGCGCATGCCTACTCCTTCCACTTGCCTCTGCGAAGACCTACTGGGGCTTT
TGTTGCACATGTCCAAAAGGTCCCGCTAGTGGCCTTCTTACCTGGTGCGCGTGCTCAGACTAGA
GGCGGGTAGGAGCGAAGTGGCCTAACCTCACGCATGCTCAGAGACTTTCTCAAGCCTGACAGTT
GAAGAGCGGTGTTAGCTGTGGAGAACCAGGCAGGATGCTGATGTTGATGCTAGCAGCAGTGGCC
ACGGTGGTCAGGGCTCAAACAGTGTGCCGGTTTCGGACAGTGAGGACTGGGAAAGTGTTTGCGA
ACCCTGTAACACTTGAAGGGGATCTGCTGTTCTACGCCTTCTCCAACACAGTTGTGGTCAAGAA
CGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAGAGGGTTTTCATAACGAAAAACCGCTTT
GAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAATGGAGGTGAAAATGCCATCAATCACGA
GTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGTGATCGATGGAAAAGTCTACAGTTACAA
CTTTATTGAGGACATCTGGAGAACAGTGAACGGTATAACAGAACCTGTCTCTCACATTAGTGGT
GACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGTTATCAAATAACCTGTTTGCATATTTCC
GTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGATTCTCATTCGAGCT
CCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCTTCCATTTCCATTCT
TTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCACTACCTGGAGTACC
CCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAAGTCATCATCAAACC
ACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGTCCTCCAATTCAGGC
CAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTTAAATGTTGAGCATG
CCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTTTTGGTAGAACAAGA
TCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAACTGTCCAATCAACAA
TTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGAGGTCCTCACCCCCG
TTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAACGTGCAGCTCGCTCT
CATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGAGCACCATGGAAGAT
AGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCATGGTACCCCGGAAGG
GCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCT
CACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATATTGAACTCCAACAG
CAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCACGAAGCCATCTCCT
CCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCT
CATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAATCTCTGCCTGTGCC
ATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCATTGAGAAGGAAGCGT
ACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGACCTGATAGTATTTTACCAGTACAAGGA
ACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCGTGGAAACCTGTGGTGGAACTGTGGAAG
GATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTTGAATGGAATAGTCA
CCTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCTCAGAACTGGAGCAT
CTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATGTCAGCTGCCATGAG
GACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTTAGGTGGCAGGACAG
ACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTGACTGTGGTGGATCC
ATACTACAGCTATTGCGACCTGAACACCATATTCAGTGTGTATGTATATGGAGCCTTACCTGTG
GCAGAGTTCCGACCAATGACCAGCATCCTCCTGATGGTCACCGTGACACTGTTTACTATGTGGC
TGGCCTATGCCATTCCCAAGCAGCTGAGGACAGAGAGGGGCCGGCGACTTACAGGTTTCTGTTT
CCAGATATTCAAGTACTGCCCAGGGATCTGCACCTGTGCTTGGCTTCGGGGCAAAATGAGAAGG
GGGCTGCGCTCCAGAAGGGTGAAGGACCAGCCAGAGAAAATCCCACAGATAGGCAAGAAGCCAG
ACATCAAGAAATAGCCAAAGACACAGGGGCGGCCCTAGACTCAAAGTGAGCCCCAGTGAGGGGC
CTTTCTCTTCCATGTGTGTCCTTGTTGGCGCTTGTTCCAATAAATTGTTAACAACAAA

hide sequence

RefSeq Acc Id:

XM_008766772 ⟹ XP_008764994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,112 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,459,980 - 1,498,342 (+)	NCBI
Rnor_6.0	9	10,390,307 - 10,428,666 (-)	NCBI

Sequence:

show sequence

GGGGCGGGGCTCAAGTCTCCGGGCGGGGCTTGGAGTTGGCCGAGATGGAGGCGTAGATCGAGGA
AGGATGTTCTAGAGAAGACTTGGAAGAGTTGGATGAAAAAGCGAGAGGAGTTATCAAATAACCT
GTTTGCATATTTCCGTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGA
TTCTCATTCGAGCTCCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCT
TCCATTTCCATTCTTTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCA
CTACCTGGAGTACCCCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAA
GTCATCATCAAACCACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGT
CCTCCAATTCAGGCCAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTT
AAATGTTGAGCATGCCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTT
TTGGTAGAACAAGATCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAAC
TGTCCAATCAACAATTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGA
GGTCCTCACCCCCGTTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAAC
GTGCAGCTCGCTCTCATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGA
GCACCATGGAAGATAGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCAT
GGTACCCCGGAAGGGCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGG
TTTAAGGCAAACCTCACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATA
TTGAACTCCAACAGCAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCA
CGAAGCCATCTCCTCCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAG
CCTCTGTCCACGCTCATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAA
TCTCTGCCTGTGCCATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCAT
TGAGAAGGAAGCGTACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGACCTGATAGTATTT
TACCAGTACAAGGAACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCGTGGAAACCTGTGG
TGGAACTGTGGAAGGATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTT
GAATGGAATAGTCACCTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCT
CAGAACTGGAGCATCTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATG
TCAGCTGCCATGAGGACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTT
AGGTGGCAGGACAGACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTG
ACTGTGGTGGATCCATACTACAGCTATTGCGACCTGAACACCATATTCAGTGTGTATGTATATG
GAGCCTTACCTGTGGCAGAGTTCCGACCAATGACCAGCATCCTCCTGATGGTCACCGTGACACT
GTTTACTATGTGGCTGGCCTATGCCATTCCCAAGCAGCTGAGGACAGAGAGGGGCCGGCGACTT
ACAGGTTTCTGTTTCCAGATATTCAAGTACTGCCCAGGGATCTGCACCTGTGCTTGGCTTCGGG
GCAAAATGAGAAGGGGGCTGCGCTCCAGAAGGGTGAAGGACCAGCCAGAGAAAATCCCACAGAT
AGGCAAGAAGCCAGACATCAAGAAATAGCCAAAGACACAGGGGCGGCCCTAGACTCAAAGTGAG
CCCCAGTGAGGGGCCTTTCTCTTCCATGTGTGTCCTTGTTGGCGCTTGTTCCAATAAATTGTTA
ACAACAAA

hide sequence

RefSeq Acc Id:

XM_017596636 ⟹ XP_017452125

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,152 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,460,007 - 1,498,342 (+)	NCBI
Rnor_6.0	9	10,390,307 - 10,428,666 (-)	NCBI

Sequence:

show sequence

GGGGCGGGGCTCAAGTCTCCGGGCGGGGCTTGGAGTTGGCCGAGATGGAGGCGTAGATCGAGGA
AGGATGTTCTAGAGAAGACTTGGAAGAGTTGGATGAAAAAGCGAGAGGATCTGCTGTTCTACGC
CTTCTCCAACACAGTTGTGGTCAAGAACGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAG
AGGGTTTTCATAACGAAAAACCGCTTTGAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAA
TGGAGGTGAAAATGCCATCAATCACGAGTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGT
GATCGATGGAAAAGTCTACAGTTACAACTTTATTGAGGACATCTGGAGAACAGTGAACGGTATA
ACAGAACCTGTCTCTCACATTAGTGGTGACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGT
TATCAAATAACCTGTTTGCATATTTCCGTGGTGGCCAAATGCCTGGGACCAACATATATTTCTC
CAACAATGGAGGATTCTCATTCGAGCTCCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTA
CTAGGAGGCATCTTCCATTTCCATTCTTTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACT
TGGGCACATTTCACTACCTGGAGTACCCCCTGAACCATAGTACCGGGGTACCCTTTTTATATGA
GAGTCCCCTTGAAGTCATCATCAAACCACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAA
ACTTTATTGGTGTCCTCCAATTCAGGCCAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGA
ACATCAACGACTTAAATGTTGAGCATGCCAAACTCACCATTCACAGCATTGCCTCGAATACTTA
CGAGCTGGCTTTTTTGGTAGAACAAGATCAACTGTACTATGGAAGTCAGAGTTACATGGGAAAC
TACATAATCAAACTGTCCAATCAACAATTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACG
TCGGCATGCTGGAGGTCCTCACCCCCGTTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAA
GTGCCTGGTGAACGTGCAGCTCGCTCTCATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTG
GAATTTCTGGAGAGCACCATGGAAGATAGAATGTTCATAATAGACATGAACAGCAAGCTAAAGC
TGTCTGCCCTCATGGTACCCCGGAAGGGCATGAACCCCACCCCACTGGTCATGGTCAGCAATCC
CCATGCCCTGGGGTTTAAGGCAAACCTCACTCAGTTTGGCAACATGTATGATGGCAACTCTAAG
TTCAAACTGGATATTGAACTCCAACAGCAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTG
CCAGCATCAAGCACGAAGCCATCTCCTCCATAACCGTGGACATAGCTGACAAGACACTTTCGTG
TGTGGACCTAAAGCCTCTGTCCACGCTCATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATT
GTGCAAAACAAAATCTCTGCCTGTGCCATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACT
ATAGTTACACCATTGAGAAGGAAGCGTACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGA
CCTGATAGTATTTTACCAGTACAAGGAACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCG
TGGAAACCTGTGGTGGAACTGTGGAAGGATGGGACTCTAGAAGAAATCATGAACGCAGAATATG
TCATCTTGGAGTTGAATGGAATAGTCACCTATTCATACTCCTTGACGGCTGCCACTGCCCACTG
CCGATCACAGCCTCAGAACTGGAGCATCTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAAC
AGAGAGACCTATGTCAGCTGCCATGAGGACAACCAGGACAACCCCCTGCTATGGCCAAATGTCG
AGTATCAGATCTTAGGTGGCAGGACAGACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTA
TACCTTCTATCTGACTGTGGTGGATCCATACTACAGCTATTGCGACCTGAACACCATATTCAGT
GTGTATGTATATGGAGCCTTACCTGTGGCAGAGTTCCGACCAATGACCAGCATCCTCCTGATGG
TCACCGTGACACTGTTTACTATGTGGCTGGCCTATGCCATTCCCAAGCAGCTGAGGACAGAGAG
GGGCCGGCGACTTACAGGTTTCTGTTTCCAGATATTCAAGTACTGCCCAGGGATCTGCACCTGT
GCTTGGCTTCGGGGCAAAATGAGAAGGGGGCTGCGCTCCAGAAGGGTGAAGGACCAGCCAGAGA
AAATCCCACAGATAGGCAAGAAGCCAGACATCAAGAAATAGCCAAAGACACAGGGGCGGCCCTA
GACTCAAAGTGAGCCCCAGTGAGGGGCCTTTCTCTTCCATGTGTGTCCTTGTTGGCGCTTGTTC
CAATAAATTGTTAACAACAAA

hide sequence

RefSeq Acc Id:

XM_017596637 ⟹ XP_017452126

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,519 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,460,207 - 1,498,342 (+)	NCBI
Rnor_6.0	9	10,390,307 - 10,428,549 (-)	NCBI

Sequence:

show sequence

TAAGCTCGAGTAAACATGACGGAGGAGGCAGAACTGGTCTGCAGTCTGGATGAGGAGCGCTCCA
CCGGGGAGGGATAGGAGGAACTGGGAAGCCGGGATTTGACTGAAGACGGATTCGAGGGGCGGGG
CTTGACTTAGGGGCGTGTTCAGAGCGGTGACTCGAGAGGCGGGGCGAGACCAAGTGCAGTTGGG
ACGGGACGACTTCTTGTCGGGGAGAACGGGTGTTCCGTAGGGCACTGCTCTAGGAAGGGGGCCT
GGAGGAAGCGTGCCCCCTACCGACTCCTACAATTACTGGTCTATCCGGTCCAAGCTGTACCTTA
GAACTGCGTTCTGTTTTCTACTTTTATCTAAAACTTTTTACAGGCTGTGTTCTGAAGGCATGGA
AGAAAAGTACAGTGCACCCCTCCTTTATAATAACTTTAGTCTTTTTAGCGTTCTTTGCTGATAC
ACGACAACAGGTTTTACCATGTCTCCCTACGCAGTTGATTCCACCATCTTCACTCTACACTGGA
GGCGTGCTTGGATGGTTTTTGCCTCCCTTGTAGTATGCATGCTACAAGCTGTGCGCATGAGCGC
ACCTGTTAGCGTTGCCTTTGTTGACAGTCTTCCCTGTTTACCAAAACATTGAAGCTTCAAGGAC
ATGTACCGAGAGACCGGTGTGCAGGTTTAGGCTCCACAAAGCAGGGGGTGGATTTTATGCATGC
CCAAAGCTCTGCTACCACAACCTCGTGTGCTCATGCACGTTTTGTGGAGACTTCCTTGGGCATG
CTCACGATTCTGACTAATGGAGCTGGGAGCCTGGGTGTAACTTTCAGGTTTGAAATGTTCATGA
TCTGCTTTCATATTGCGCATGCCTACTCCTTCCACTTGCCTCTGCGAAGACCTACTGGGGCTTT
TGTTGCACATGTCCAAAAGGTCCCGCTAGTGGCCTTCTTACCTGGTGCGCGTGCTCAGACTAGA
GGCGGGTAGGAGCGAAGTGGCCTAACCTCACGCATGCTCAGAGACTTTCTCAAGCCTGACAGTT
GAAGAGCGGTGTTAGCTGTGGAGAACCAGGCAGGATGCTGATGTTGATGCTAGCAGCAGTGGCC
ACGGTGGTCAGGGCTCAAACAGTGTGCCGGTTTCGGACAGTGAGGACTGGGAAAGTGTTTGCGA
ACCCTGTAACACTTGAAGGGGATCTGCTGTTCTACGCCTTCTCCAACACAGTTGTGGTCAAGAA
CGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAGAGGGTTTTCATAACGAAAAACCGCTTT
GAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAATGGAGGTGAAAATGCCATCAATCACGA
GTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGTGATCGATGGAAAAGTCTACAGTTACAA
CTTTATTGAGGACATCTGGAGAACAGTGAACGGTATAACAGAACCTGTCTCTCACATTAGTGGT
GACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGTTATCAAATAACCTGTTTGCATATTTCC
GTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGATTCTCATTCGAGCT
CCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCTTCCATTTCCATTCT
TTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCACTACCTGGAGTACC
CCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAAGTCATCATCAAACC
ACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGTCCTCCAATTCAGGC
CAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTTAAATGTTGAGCATG
CCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTTTTGGTAGAACAAGA
TCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAACTGTCCAATCAACAA
TTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGAGGTCCTCACCCCCG
TTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAACGTGCAGCTCGCTCT
CATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGAGCACCATGGAAGAT
AGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCATGGTACCCCGGAAGG
GCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCT
CACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATATTGAACTCCAACAG
CAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCACGAAGCCATCTCCT
CCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCT
CATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAATCTCTGCCTGTGCC
ATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCATTGAGAAGTGGAAGG
ATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTTGAATGGAATAGTCAC
CTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCTCAGAACTGGAGCATC
TTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATGTCAGCTGCCATGAGG
ACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTTAGGTGGCAGGACAGA
CAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTGACTGTGGTGGATCCA
TACTACAGCTATTGCGACCTGAACACCATATTCAGTGTGTATGTATATGGAGCCTTACCTGTGG
CAGAGTTCCGACCAATGACCAGCATCCTCCTGATGGTCACCGTGACACTGTTTACTATGTGGCT
GGCCTATGCCATTCCCAAGCAGCTGAGGACAGAGAGGGGCCGGCGACTTACAGGTTTCTGTTTC
CAGATATTCAAGTACTGCCCAGGGATCTGCACCTGTGCTTGGCTTCGGGGCAAAATGAGAAGGG
GGCTGCGCTCCAGAAGGGTGAAGGACCAGCCAGAGAAAATCCCACAGATAGGCAAGAAGCCAGA
CATCAAGAAATAGCCAAAGACACAGGGGCGGCCCTAGACTCAAAGTGAGCCCCAGTGAGGGGCC
TTTCTCTTCCATGTGTGTCCTTGTTGGCGCTTGTTCCAATAAATTGTTAACAACAAA

hide sequence

RefSeq Acc Id:

XM_017596639 ⟹ XP_017452128

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,514 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,460,205 - 1,497,718 (+)	NCBI
Rnor_6.0	9	10,390,902 - 10,428,549 (-)	NCBI

Sequence:

show sequence

TAAGCTCGAGTAAACATGACGGAGGAGGCAGAACTGGTCTGCAGTCTGGATGAGGAGCGCTCCA
CCGGGGAGGGATAGGAGGAACTGGGAAGCCGGGATTTGACTGAAGACGGATTCGAGGGGCGGGG
CTTGACTTAGGGGCGTGTTCAGAGCGGTGACTCGAGAGGCGGGGCGAGACCAAGTGCAGTTGGG
ACGGGACGACTTCTTGTCGGGGAGAACGGGTGTTCCGTAGGGCACTGCTCTAGGAAGGGGGCCT
GGAGGAAGCGTGCCCCCTACCGACTCCTACAATTACTGGTCTATCCGGTCCAAGCTGTACCTTA
GAACTGCGTTCTGTTTTCTACTTTTATCTAAAACTTTTTACAGGCTGTGTTCTGAAGGCATGGA
AGAAAAGTACAGTGCACCCCTCCTTTATAATAACTTTAGTCTTTTTAGCGTTCTTTGCTGATAC
ACGACAACAGGTTTTACCATGTCTCCCTACGCAGTTGATTCCACCATCTTCACTCTACACTGGA
GGCGTGCTTGGATGGTTTTTGCCTCCCTTGTAGTATGCATGCTACAAGCTGTGCGCATGAGCGC
ACCTGTTAGCGTTGCCTTTGTTGACAGTCTTCCCTGTTTACCAAAACATTGAAGCTTCAAGGAC
ATGTACCGAGAGACCGGTGTGCAGGTTTAGGCTCCACAAAGCAGGGGGTGGATTTTATGCATGC
CCAAAGCTCTGCTACCACAACCTCGTGTGCTCATGCACGTTTTGTGGAGACTTCCTTGGGCATG
CTCACGATTCTGACTAATGGAGCTGGGAGCCTGGGTGTAACTTTCAGGTTTGAAATGTTCATGA
TCTGCTTTCATATTGCGCATGCCTACTCCTTCCACTTGCCTCTGCGAAGACCTACTGGGGCTTT
TGTTGCACATGTCCAAAAGGTCCCGCTAGTGGCCTTCTTACCTGGTGCGCGTGCTCAGACTAGA
GGCGGGTAGGAGCGAAGTGGCCTAACCTCACGCATGCTCAGAGACTTTCTCAAGCCTGACAGTT
GAAGAGCGGTGTTAGCTGTGGAGAACCAGGCAGGATGCTGATGTTGATGCTAGCAGCAGTGGCC
ACGGTGGTCAGGGCTCAAACAGTGTGCCGGTTTCGGACAGTGAGGACTGGGAAAGTGTTTGCGA
ACCCTGTAACACTTGAAGGGGATCTGCTGTTCTACGCCTTCTCCAACACAGTTGTGGTCAAGAA
CGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAGAGGGTTTTCATAACGAAAAACCGCTTT
GAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAATGGAGGTGAAAATGCCATCAATCACGA
GTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGTGATCGATGGAAAAGTCTACAGTTACAA
CTTTATTGAGGACATCTGGAGAACAGTGAACGGTATAACAGAACCTGTCTCTCACATTAGTGGT
GACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGTTATCAAATAACCTGTTTGCATATTTCC
GTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGATTCTCATTCGAGCT
CCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCTTCCATTTCCATTCT
TTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCACTACCTGGAGTACC
CCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAAGTCATCATCAAACC
ACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGTCCTCCAATTCAGGC
CAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTTAAATGTTGAGCATG
CCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTTTTGGTAGAACAAGA
TCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAACTGTCCAATCAACAA
TTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGAGGTCCTCACCCCCG
TTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAACGTGCAGCTCGCTCT
CATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGAGCACCATGGAAGAT
AGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCATGGTACCCCGGAAGG
GCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCT
CACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATATTGAACTCCAACAG
CAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCACGAAGCCATCTCCT
CCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCT
CATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAATCTCTGCCTGTGCC
ATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCATTGAGAAGGAAGCGT
ACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGACCTGATAGTATTTTACCAGTACAAGGA
ACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCGTGGAAACCTGTGGTGGAACTGTGGAAG
GATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTTGAATGGAATAGTCA
CCTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCTCAGAACTGGAGCAT
CTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATGTCAGCTGCCATGAG
GACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTTAGGTGGCAGGACAG
ACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTGACTGTGGTGGATCC
ATACTACAGAGGACGCTTGTGGAGCTGCCTACCAGTGGAGACTTTGCCTGCTCTTCCTACTCCT
GCTTCCTGTTCCCCTGACACCTGGCACTTCTTGCCCTCACTAAAAACTCCCTCCCCTCGCTGAG
GCTCTCTGTCCTCTCTGTGACTGACCACAACAGGCAGCTTCAGCACTGGGCTTTGCCCTTCCCC
CACCTTTTCCCTCCTCTTGGTAAAGCTGAAGACCTGTTACTGTGTGTTTCTTTCTAACTCTGAT
GAAAT

hide sequence

RefSeq Acc Id:

XM_017596640 ⟹ XP_017452129

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,515 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,460,207 - 1,497,901 (+)	NCBI
Rnor_6.0	9	10,390,646 - 10,428,549 (-)	NCBI

Sequence:

show sequence

TAAGCTCGAGTAAACATGACGGAGGAGGCAGAACTGGTCTGCAGTCTGGATGAGGAGCGCTCCA
CCGGGGAGGGATAGGAGGAACTGGGAAGCCGGGATTTGACTGAAGACGGATTCGAGGGGCGGGG
CTTGACTTAGGGGCGTGTTCAGAGCGGTGACTCGAGAGGCGGGGCGAGACCAAGTGCAGTTGGG
ACGGGACGACTTCTTGTCGGGGAGAACGGGTGTTCCGTAGGGCACTGCTCTAGGAAGGGGGCCT
GGAGGAAGCGTGCCCCCTACCGACTCCTACAATTACTGGTCTATCCGGTCCAAGCTGTACCTTA
GAACTGCGTTCTGTTTTCTACTTTTATCTAAAACTTTTTACAGGCTGTGTTCTGAAGGCATGGA
AGAAAAGTACAGTGCACCCCTCCTTTATAATAACTTTAGTCTTTTTAGCGTTCTTTGCTGATAC
ACGACAACAGGTTTTACCATGTCTCCCTACGCAGTTGATTCCACCATCTTCACTCTACACTGGA
GGCGTGCTTGGATGGTTTTTGCCTCCCTTGTAGTATGCATGCTACAAGCTGTGCGCATGAGCGC
ACCTGTTAGCGTTGCCTTTGTTGACAGTCTTCCCTGTTTACCAAAACATTGAAGCTTCAAGGAC
ATGTACCGAGAGACCGGTGTGCAGGTTTAGGCTCCACAAAGCAGGGGGTGGATTTTATGCATGC
CCAAAGCTCTGCTACCACAACCTCGTGTGCTCATGCACGTTTTGTGGAGACTTCCTTGGGCATG
CTCACGATTCTGACTAATGGAGCTGGGAGCCTGGGTGTAACTTTCAGGTTTGAAATGTTCATGA
TCTGCTTTCATATTGCGCATGCCTACTCCTTCCACTTGCCTCTGCGAAGACCTACTGGGGCTTT
TGTTGCACATGTCCAAAAGGTCCCGCTAGTGGCCTTCTTACCTGGTGCGCGTGCTCAGACTAGA
GGCGGGTAGGAGCGAAGTGGCCTAACCTCACGCATGCTCAGAGACTTTCTCAAGCCTGACAGTT
GAAGAGCGGTGTTAGCTGTGGAGAACCAGGCAGGATGCTGATGTTGATGCTAGCAGCAGTGGCC
ACGGTGGTCAGGGCTCAAACAGTGTGCCGGTTTCGGACAGTGAGGACTGGGAAAGTGTTTGCGA
ACCCTGTAACACTTGAAGGGGATCTGCTGTTCTACGCCTTCTCCAACACAGTTGTGGTCAAGAA
CGTATGCAAGACTGACATTGCCGTGTATCTAGGGCAGAGGGTTTTCATAACGAAAAACCGCTTT
GAGGCTAGCATCTTACCGCTCACCATTCCGAAGTCAATGGAGGTGAAAATGCCATCAATCACGA
GTGCCCACTTTGTTTCCGATGCAATGATTCTGTTTGTGATCGATGGAAAAGTCTACAGTTACAA
CTTTATTGAGGACATCTGGAGAACAGTGAACGGTATAACAGAACCTGTCTCTCACATTAGTGGT
GACCCTTGTTGTTTTGAAGGCTACTTTTGCCTGGAGTTATCAAATAACCTGTTTGCATATTTCC
GTGGTGGCCAAATGCCTGGGACCAACATATATTTCTCCAACAATGGAGGATTCTCATTCGAGCT
CCTGAACAGTGACAGAATGAGTCACCTTAAAGGGTTACTAGGAGGCATCTTCCATTTCCATTCT
TTGTCTCAGGTGGGGATACTCTTGGTTGAAAACAACTTGGGCACATTTCACTACCTGGAGTACC
CCCTGAACCATAGTACCGGGGTACCCTTTTTATATGAGAGTCCCCTTGAAGTCATCATCAAACC
ACAGCAGAGAGGGTTTCTGATCCTCTGGAATCAGAAAACTTTATTGGTGTCCTCCAATTCAGGC
CAGATCGTAGAAGCCATGCAGTTGATGGAAGAAGGGAACATCAACGACTTAAATGTTGAGCATG
CCAAACTCACCATTCACAGCATTGCCTCGAATACTTACGAGCTGGCTTTTTTGGTAGAACAAGA
TCAACTGTACTATGGAAGTCAGAGTTACATGGGAAACTACATAATCAAACTGTCCAATCAACAA
TTCTGGTCTGAAGAGGCAAGTGTGCATTTCTGGGACGTCGGCATGCTGGAGGTCCTCACCCCCG
TTTCTGACCCATATTTCCCAGCGTTTGACTTCAAGAAGTGCCTGGTGAACGTGCAGCTCGCTCT
CATGGACCAGAGCCTGCAACTCGAGCCATGTAATGTGGAATTTCTGGAGAGCACCATGGAAGAT
AGAATGTTCATAATAGACATGAACAGCAAGCTAAAGCTGTCTGCCCTCATGGTACCCCGGAAGG
GCATGAACCCCACCCCACTGGTCATGGTCAGCAATCCCCATGCCCTGGGGTTTAAGGCAAACCT
CACTCAGTTTGGCAACATGTATGATGGCAACTCTAAGTTCAAACTGGATATTGAACTCCAACAG
CAGCAGCACTGGGGCAACTCAGAGTTGAACTTCACTGCCAGCATCAAGCACGAAGCCATCTCCT
CCATAACCGTGGACATAGCTGACAAGACACTTTCGTGTGTGGACCTAAAGCCTCTGTCCACGCT
CATCTCAGTTGGCTGTGACTTGACAAAGAAAGTTATTGTGCAAAACAAAATCTCTGCCTGTGCC
ATGGGGATCCTCGACCCGGTGCTGCTGCAGAAGAACTATAGTTACACCATTGAGAAGGAAGCGT
ACAACCCAACCAGCTACAGTGGTGAAGCCCAGGATGACCTGATAGTATTTTACCAGTACAAGGA
ACTGGGCTGTCCCCGCTTAGTCTACTACGACAAGCCGTGGAAACCTGTGGTGGAACTGTGGAAG
GATGGGACTCTAGAAGAAATCATGAACGCAGAATATGTCATCTTGGAGTTGAATGGAATAGTCA
CCTATTCATACTCCTTGACGGCTGCCACTGCCCACTGCCGATCACAGCCTCAGAACTGGAGCAT
CTTTAAAGAAGACGCAGAGAAGCCGTCCCTCTGGAACAGAGAGACCTATGTCAGCTGCCATGAG
GACAACCAGGACAACCCCCTGCTATGGCCAAATGTCGAGTATCAGATCTTAGGTGGCAGGACAG
ACAACAAGATTATTTTTGGCCAAAGAAATGGAATCTATACCTTCTATCTGACTGTGGTGGATCC
ATACTACAGTATTCCCTGGACAAAATCCCCAAACCAAAGCAAGCAAGCAAACCAACCTTAACAC
CCTCACACAAAGAGATCTGCTGTGTGTTGAAAGGATGAGAGCTGCCACCCAAGACCTGGGTTTA
CAACCTGACAGACTGTGCCCACTGTGCCCTGCAGCTATTGCGACCTGAACACCATATTCAGTGT
GTATGTATATGGAGCCTTACCTGTGGCAGAGTTCCGACCAATGACCAGCATCCTCCTGATGGTC

hide sequence

RefSeq Acc Id:

XM_039084200 ⟹ XP_038940128

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,113 - 1,585,470 (+)	NCBI
mRatBN7.2	9	1,459,967 - 1,498,342 (+)	NCBI

RefSeq Acc Id:

XM_063267708 ⟹ XP_063123778

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,353 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267709 ⟹ XP_063123779

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,547,518 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267710 ⟹ XP_063123780

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,354 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267711 ⟹ XP_063123781

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,351 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267712 ⟹ XP_063123782

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,352 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267714 ⟹ XP_063123784

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,352 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267715 ⟹ XP_063123785

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,349 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267716 ⟹ XP_063123786

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,351 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267717 ⟹ XP_063123787

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,546,903 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267718 ⟹ XP_063123788

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,559,655 - 1,585,470 (+)	NCBI

RefSeq Acc Id:

XM_063267720 ⟹ XP_063123790

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,548,349 - 1,580,524 (+)	NCBI

RefSeq Acc Id:

XM_063267721 ⟹ XP_063123791

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	1,563,015 - 1,585,470 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128456	(Get FASTA)	NCBI Sequence Viewer
	NP_001419933	(Get FASTA)	NCBI Sequence Viewer
	NP_001419937	(Get FASTA)	NCBI Sequence Viewer
	NP_001419938	(Get FASTA)	NCBI Sequence Viewer
	XP_006244402	(Get FASTA)	NCBI Sequence Viewer
	XP_008764994	(Get FASTA)	NCBI Sequence Viewer
	XP_017452125	(Get FASTA)	NCBI Sequence Viewer
	XP_017452126	(Get FASTA)	NCBI Sequence Viewer
	XP_017452128	(Get FASTA)	NCBI Sequence Viewer
	XP_017452129	(Get FASTA)	NCBI Sequence Viewer
	XP_038940128	(Get FASTA)	NCBI Sequence Viewer
	XP_063123778	(Get FASTA)	NCBI Sequence Viewer
	XP_063123779	(Get FASTA)	NCBI Sequence Viewer
	XP_063123780	(Get FASTA)	NCBI Sequence Viewer
	XP_063123781	(Get FASTA)	NCBI Sequence Viewer
	XP_063123782	(Get FASTA)	NCBI Sequence Viewer
	XP_063123784	(Get FASTA)	NCBI Sequence Viewer
	XP_063123785	(Get FASTA)	NCBI Sequence Viewer
	XP_063123786	(Get FASTA)	NCBI Sequence Viewer
	XP_063123787	(Get FASTA)	NCBI Sequence Viewer
	XP_063123788	(Get FASTA)	NCBI Sequence Viewer
	XP_063123790	(Get FASTA)	NCBI Sequence Viewer
	XP_063123791	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI69121	(Get FASTA)	NCBI Sequence Viewer
	B5DFM7	(Get FASTA)	NCBI Sequence Viewer
	EDL83620	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000067404
	ENSRNOP00000086900
	ENSRNOP00000094218

RefSeq Acc Id:	NP_001128456 ⟸ NM_001134984
- Peptide Label:	precursor
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLMLMLAAVATVVRAQTVCRFRTVRTGKVFANPVTLEGDLLFYAFSNTVVVKNVCKTDIAVYLG QRVFITKNRFEASILPLTIPKSMEVKMPSITSAHFVSDAMILFVIDGKVYSYNFIEDIWRTVNG ITEPVSHISGDPCCFEGYFCLELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKG LLGGIFHFHSLSQVGILLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQ KTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMG NYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCN VEFLESTMEDRMFIIDMNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNS KFKLDIELQQQQHWGNSELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKV IVQNKISACAMGILDPVLLQKNYSYTIEKEAYNPTSYSGEAQDDLIVFYQYKELGCPRLVYYDK PWKPVVELWKDGTLEEIMNAEYVILELNGIVTYSYSLTAATAHCRSQPQNWSIFKEDAEKPSLW NRETYVSCHEDNQDNPLLWPNVEYQILGGRTDNKIIFGQRNGIYTFYLTVVDPYYRYSSTAQGS APVLGFGAK hide sequence

RefSeq Acc Id:

XP_006244402 ⟸ XM_006244340

- Peptide Label:

isoform X3

- Sequence:

show sequence

MLMLMLAAVATVVRAQTVCRFRTVRTGKVFANPVTLEGDLLFYAFSNTVVVKNVCKTDIAVYLG
QRVFITKNRFEASILPLTIPKSMEVKMPSITSAHFVSDAMILFVIDGKVYSYNFIEDIWRTVNG
ITEPVSHISGDPCCFEGYFCLELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKG
LLGGIFHFHSLSQVGILLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQ
KTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMG
NYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCN
VEFLESTMEDRMFIIDMNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNS
KFKLDIELQQQQHWGNSELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKV
IVQNKISACAMGILDPVLLQKNYSYTIEKEAYNPTSYSGEAQDDLIVFYQYKELGCPRLVYYDK
PWKPVVELWKDGTLEEIMNAEYVILELNGIVTYSYSLTAATAHCRSQPQNWSIFKEDAEKPSLW
NRETYVSCHEDNQDNPLLWPNVEYQILGGRTDNKIIFGQRNGIYTFYLTVVDPYYSYCDLNTIF
SVYVYGALPVAEFRPMTSILLMVTVTLFTMWLAYAIPKQLRTERGRRLTGFCFQIFKYCPGICT
CAWLRGKMRRGLRSRRVKDQPEKIPQIGKKPDIKK

hide sequence

RefSeq Acc Id:

XP_008764994 ⟸ XM_008766772

- Peptide Label:

isoform X15

- Sequence:

show sequence

MKKREELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKGLLGGIFHFHSLSQVGI
LLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQKTLLVSSNSGQIVEAM
QLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMGNYIIKLSNQQFWSEEA
SVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCNVEFLESTMEDRMFIID
MNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNSKFKLDIELQQQQHWGN
SELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKVIVQNKISACAMGILDP
VLLQKNYSYTIEKEAYNPTSYSGEAQDDLIVFYQYKELGCPRLVYYDKPWKPVVELWKDGTLEE
IMNAEYVILELNGIVTYSYSLTAATAHCRSQPQNWSIFKEDAEKPSLWNRETYVSCHEDNQDNP
LLWPNVEYQILGGRTDNKIIFGQRNGIYTFYLTVVDPYYSYCDLNTIFSVYVYGALPVAEFRPM
TSILLMVTVTLFTMWLAYAIPKQLRTERGRRLTGFCFQIFKYCPGICTCAWLRGKMRRGLRSRR
VKDQPEKIPQIGKKPDIKK

hide sequence

RefSeq Acc Id:	XP_017452125 ⟸ XM_017596636
- Peptide Label:	isoform X6
- UniProtKB:	A0A8L2QY57 (UniProtKB/TrEMBL), A0A8I6AZN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKKREDLLFYAFSNTVVVKNVCKTDIAVYLGQRVFITKNRFEASILPLTIPKSMEVKMPSITSA HFVSDAMILFVIDGKVYSYNFIEDIWRTVNGITEPVSHISGDPCCFEGYFCLELSNNLFAYFRG GQMPGTNIYFSNNGGFSFELLNSDRMSHLKGLLGGIFHFHSLSQVGILLVENNLGTFHYLEYPL NHSTGVPFLYESPLEVIIKPQQRGFLILWNQKTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAK LTIHSIASNTYELAFLVEQDQLYYGSQSYMGNYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVS DPYFPAFDFKKCLVNVQLALMDQSLQLEPCNVEFLESTMEDRMFIIDMNSKLKLSALMVPRKGM NPTPLVMVSNPHALGFKANLTQFGNMYDGNSKFKLDIELQQQQHWGNSELNFTASIKHEAISSI TVDIADKTLSCVDLKPLSTLISVGCDLTKKVIVQNKISACAMGILDPVLLQKNYSYTIEKEAYN PTSYSGEAQDDLIVFYQYKELGCPRLVYYDKPWKPVVELWKDGTLEEIMNAEYVILELNGIVTY SYSLTAATAHCRSQPQNWSIFKEDAEKPSLWNRETYVSCHEDNQDNPLLWPNVEYQILGGRTDN KIIFGQRNGIYTFYLTVVDPYYSYCDLNTIFSVYVYGALPVAEFRPMTSILLMVTVTLFTMWLA YAIPKQLRTERGRRLTGFCFQIFKYCPGICTCAWLRGKMRRGLRSRRVKDQPEKIPQIGKKPDI KK hide sequence

RefSeq Acc Id:

XP_017452126 ⟸ XM_017596637

- Peptide Label:

isoform X9

- Sequence:

show sequence

MLMLMLAAVATVVRAQTVCRFRTVRTGKVFANPVTLEGDLLFYAFSNTVVVKNVCKTDIAVYLG
QRVFITKNRFEASILPLTIPKSMEVKMPSITSAHFVSDAMILFVIDGKVYSYNFIEDIWRTVNG
ITEPVSHISGDPCCFEGYFCLELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKG
LLGGIFHFHSLSQVGILLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQ
KTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMG
NYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCN
VEFLESTMEDRMFIIDMNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNS
KFKLDIELQQQQHWGNSELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKV
IVQNKISACAMGILDPVLLQKNYSYTIEKWKDGTLEEIMNAEYVILELNGIVTYSYSLTAATAH
CRSQPQNWSIFKEDAEKPSLWNRETYVSCHEDNQDNPLLWPNVEYQILGGRTDNKIIFGQRNGI
YTFYLTVVDPYYSYCDLNTIFSVYVYGALPVAEFRPMTSILLMVTVTLFTMWLAYAIPKQLRTE
RGRRLTGFCFQIFKYCPGICTCAWLRGKMRRGLRSRRVKDQPEKIPQIGKKPDIKK

hide sequence

RefSeq Acc Id:	XP_017452129 ⟸ XM_017596640
- Peptide Label:	isoform X13
- UniProtKB:	A0A8I6A393 (UniProtKB/TrEMBL), A0A8I6AZN7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLMLMLAAVATVVRAQTVCRFRTVRTGKVFANPVTLEGDLLFYAFSNTVVVKNVCKTDIAVYLG QRVFITKNRFEASILPLTIPKSMEVKMPSITSAHFVSDAMILFVIDGKVYSYNFIEDIWRTVNG ITEPVSHISGDPCCFEGYFCLELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKG LLGGIFHFHSLSQVGILLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQ KTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMG NYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCN VEFLESTMEDRMFIIDMNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNS KFKLDIELQQQQHWGNSELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKV IVQNKISACAMGILDPVLLQKNYSYTIEKEAYNPTSYSGEAQDDLIVFYQYKELGCPRLVYYDK PWKPVVELWKDGTLEEIMNAEYVILELNGIVTYSYSLTAATAHCRSQPQNWSIFKEDAEKPSLW NRETYVSCHEDNQDNPLLWPNVEYQILGGRTDNKIIFGQRNGIYTFYLTVVDPYYSIPWTKSPN QSKQANQP hide sequence

RefSeq Acc Id:

XP_017452128 ⟸ XM_017596639

- Peptide Label:

isoform X10

- Sequence:

show sequence

MLMLMLAAVATVVRAQTVCRFRTVRTGKVFANPVTLEGDLLFYAFSNTVVVKNVCKTDIAVYLG
QRVFITKNRFEASILPLTIPKSMEVKMPSITSAHFVSDAMILFVIDGKVYSYNFIEDIWRTVNG
ITEPVSHISGDPCCFEGYFCLELSNNLFAYFRGGQMPGTNIYFSNNGGFSFELLNSDRMSHLKG
LLGGIFHFHSLSQVGILLVENNLGTFHYLEYPLNHSTGVPFLYESPLEVIIKPQQRGFLILWNQ
KTLLVSSNSGQIVEAMQLMEEGNINDLNVEHAKLTIHSIASNTYELAFLVEQDQLYYGSQSYMG
NYIIKLSNQQFWSEEASVHFWDVGMLEVLTPVSDPYFPAFDFKKCLVNVQLALMDQSLQLEPCN
VEFLESTMEDRMFIIDMNSKLKLSALMVPRKGMNPTPLVMVSNPHALGFKANLTQFGNMYDGNS
KFKLDIELQQQQHWGNSELNFTASIKHEAISSITVDIADKTLSCVDLKPLSTLISVGCDLTKKV
IVQNKISACAMGILDPVLLQKNYSYTIEKEAYNPTSYSGEAQDDLIVFYQYKELGCPRLVYYDK
PWKPVVELWKDGTLEEIMNAEYVILELNGIVTYSYSLTAATAHCRSQPQNWSIFKEDAEKPSLW
NRETYVSCHEDNQDNPLLWPNVEYQILGGRTDNKIIFGQRNGIYTFYLTVVDPYYRGRLWSCLP
VETLPALPTPASCSPDTWHFLPSLKTPSPR

hide sequence

Ensembl Acc Id:

ENSRNOP00000067404 ⟸ ENSRNOT00000071207

RefSeq Acc Id:	XP_038940128 ⟸ XM_039084200
- Peptide Label:	isoform X12
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000086900 ⟸ ENSRNOT00000100019

Ensembl Acc Id:

ENSRNOP00000094218 ⟸ ENSRNOT00000094106

RefSeq Acc Id:	XP_063123787 ⟸ XM_063267717
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063123779 ⟸ XM_063267709
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063123785 ⟸ XM_063267715
- Peptide Label:	isoform X11
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123790 ⟸ XM_063267720
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063123781 ⟸ XM_063267711
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123786 ⟸ XM_063267716
- Peptide Label:	isoform X14
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123784 ⟸ XM_063267714
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123782 ⟸ XM_063267712
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I6AZN7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123778 ⟸ XM_063267708
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063123780 ⟸ XM_063267710
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063123788 ⟸ XM_063267718
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_063123791 ⟸ XM_063267721
- Peptide Label:	isoform X18
- UniProtKB:	A6KQW2 (UniProtKB/TrEMBL)

Protein Domains

CATSPERD beta-propeller CATSPERD Ig-like CATSPERD/E C-terminal

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B5DFM7-F1-model_v2	AlphaFold	B5DFM7	1-803	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1594167	AgrOrtholog
BioCyc Gene	G2FUF-28520	BioCyc
Ensembl Genes	ENSRNOG00000048818	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000071207	ENTREZGENE
	ENSRNOT00000094106	ENTREZGENE
	ENSRNOT00000100019	ENTREZGENE
InterPro	CATSPERD/E	UniProtKB/Swiss-Prot
	CATSPERD/E_C	UniProtKB/Swiss-Prot
	CATSPERD_b-prop	UniProtKB/Swiss-Prot
	Ig-like_CATSPERD	UniProtKB/Swiss-Prot
KEGG Report	rno:680264	UniProtKB/Swiss-Prot
NCBI Gene	680264	ENTREZGENE
PANTHER	CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT DELTA	UniProtKB/Swiss-Prot
	PTHR33722	UniProtKB/Swiss-Prot
Pfam	CATSPERD	UniProtKB/Swiss-Prot
	CATSPERD-E_C	UniProtKB/Swiss-Prot
	Ig-like_CATSPERD	UniProtKB/Swiss-Prot
PhenoGen	Catsperd	PhenoGen
RatGTEx	ENSRNOG00000048818	RatGTEx
UniProt	A0A0H2UI41	ENTREZGENE
	A0A8I6A393	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AZN7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QY57	ENTREZGENE, UniProtKB/TrEMBL
	A6KQW2	ENTREZGENE, UniProtKB/TrEMBL
	B5DFM7	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A0A0H2UI41	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2025-11-13	Catsperd	catsper channel auxiliary subunit delta	Catsperd	cation channel sperm associated auxiliary subunit delta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2016-02-11	Catsperd	cation channel sperm associated auxiliary subunit delta	Catsperd	catsper channel auxiliary subunit delta	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-16	Catsperd	catsper channel auxiliary subunit delta	Tmem146	transmembrane protein 146	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-05	Tmem146	transmembrane protein 146	LOC680264	hypothetical protein LOC680264	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-20	LOC680264	hypothetical protein LOC680264			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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