Gene: Pcp4l1 (Purkinje cell protein 4-like 1) Rattus norvegicus
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Symbol:
Pcp4l1
Name:
Purkinje cell protein 4-like 1
RGD ID:
1593809
Description:
Orthologous to human PCP4L1 (Purkinje cell protein 4 like 1); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.
Type:
protein-coding
RefSeq Status:
PROVISIONAL
Previously known as:
hypothetical protein LOC685448; LOC685448; Purkinje cell protein 4-like protein 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 86,121,463 - 86,145,097 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 13 86,121,464 - 86,144,899 (-) Ensembl GRCr8 mRatBN7.2 13 83,588,992 - 83,612,631 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 83,588,992 - 83,609,966 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 13 86,094,718 - 86,118,283 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 87,492,955 - 87,516,526 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 84,724,551 - 84,747,967 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 89,542,377 - 89,565,920 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 89,542,378 - 89,565,813 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 13 94,169,877 - 94,192,679 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 13 87,059,476 - 87,083,085 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 13 83,220,194 - 83,243,617 (-) NCBI Celera Cytogenetic Map 13 q24 NCBI
JBrowse:
Only show annotations with direct experimental evidence (0 objects hidden)
Pcp4l1 Rat 17beta-estradiol multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [Estradiol co-treated with TGFB1 protein] results in decreased expression of PCP4L1 mRNA CTD PMID:30165855 Pcp4l1 Rat 17beta-estradiol affects expression ISO Pcp4l1 (Mus musculus) 6480464 Estradiol affects the expression of PCP4L1 mRNA CTD PMID:39298647 Pcp4l1 Rat 17beta-estradiol increases expression EXP 6480464 Estradiol results in increased expression of PCP4L1 mRNA CTD PMID:32145629 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin binds to AHR protein] which results in increased expression of PCP4L1 mRNA; [TIPARP gene more ... CTD PMID:16214954|PMID:21762485|PMID:25975270 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in decreased expression of PCP4L1 mRNA CTD PMID:33956508 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Pcp4l1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of PCP4L1 mRNA CTD PMID:19770486|PMID:21889950|PMID:25270620|PMID:25975270|PMID:26290441|PMID:31511937 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Pcp4l1 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of PCP4L1 mRNA CTD PMID:20702594|PMID:24680724|PMID:26377647|PMID:28922406 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of PCP4L1 mRNA CTD PMID:31511937 Pcp4l1 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of PCP4L1 mRNA CTD PMID:21215274 Pcp4l1 Rat 2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expression ISO Pcp4l1 (Mus musculus) 6480464 2,2',4,4',5-brominated diphenyl ether affects the expression of PCP4L1 mRNA CTD PMID:38648751 Pcp4l1 Rat 2-hydroxypropanoic acid increases expression ISO PCP4L1 (Homo sapiens) 6480464 Lactic Acid results in increased expression of PCP4L1 mRNA CTD PMID:30851411 Pcp4l1 Rat 3,3',4,4',5-pentachlorobiphenyl affects expression ISO Pcp4l1 (Mus musculus) 6480464 3,4,5,3',4'-pentachlorobiphenyl affects the expression of PCP4L1 mRNA CTD PMID:20702594 Pcp4l1 Rat 3,4-methylenedioxymethamphetamine decreases expression ISO Pcp4l1 (Mus musculus) 6480464 N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of PCP4L1 mRNA CTD PMID:26251327 Pcp4l1 Rat 4,4'-sulfonyldiphenol decreases expression ISO Pcp4l1 (Mus musculus) 6480464 bisphenol S results in decreased expression of PCP4L1 mRNA CTD PMID:30951980 Pcp4l1 Rat 4,4'-sulfonyldiphenol affects expression ISO Pcp4l1 (Mus musculus) 6480464 bisphenol S affects the expression of PCP4L1 mRNA CTD PMID:39298647 Pcp4l1 Rat 4-hydroxyphenyl retinamide increases expression ISO Pcp4l1 (Mus musculus) 6480464 Fenretinide results in increased expression of PCP4L1 mRNA CTD PMID:28973697 Pcp4l1 Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of PCP4L1 mRNA CTD PMID:24780913|PMID:30047161 Pcp4l1 Rat acrylamide decreases expression EXP 6480464 Acrylamide results in decreased expression of PCP4L1 mRNA CTD PMID:28959563 Pcp4l1 Rat aflatoxin B1 increases expression EXP 6480464 Aflatoxin B1 results in increased expression of PCP4L1 mRNA CTD PMID:23630614|PMID:25378103 Pcp4l1 Rat aflatoxin M1 increases expression ISO PCP4L1 (Homo sapiens) 6480464 Aflatoxin M1 results in increased expression of PCP4L1 mRNA CTD PMID:30928695 Pcp4l1 Rat benzo[a]pyrene decreases expression EXP 6480464 Benzo(a)pyrene results in decreased expression of PCP4L1 mRNA CTD PMID:21839799 Pcp4l1 Rat benzo[a]pyrene increases expression ISO Pcp4l1 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of PCP4L1 mRNA CTD PMID:32417428 Pcp4l1 Rat benzo[a]pyrene increases methylation ISO PCP4L1 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of PCP4L1 exon CTD PMID:27901495 Pcp4l1 Rat benzo[a]pyrene affects methylation ISO PCP4L1 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of PCP4L1 promoter CTD PMID:27901495 Pcp4l1 Rat benzo[b]fluoranthene decreases expression ISO Pcp4l1 (Mus musculus) 6480464 benzo(b)fluoranthene results in decreased expression of PCP4L1 mRNA CTD PMID:26377693 Pcp4l1 Rat Benzo[k]fluoranthene increases expression ISO Pcp4l1 (Mus musculus) 6480464 benzo(k)fluoranthene results in increased expression of PCP4L1 mRNA CTD PMID:26377693 Pcp4l1 Rat bis(2-ethylhexyl) phthalate decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Diethylhexyl Phthalate results in decreased expression of PCP4L1 mRNA CTD PMID:34319233 Pcp4l1 Rat bisphenol A decreases expression ISO Pcp4l1 (Mus musculus) 6480464 bisphenol A results in decreased expression of PCP4L1 mRNA CTD PMID:21932408 Pcp4l1 Rat bisphenol A increases expression ISO Pcp4l1 (Mus musculus) 6480464 bisphenol A results in increased expression of PCP4L1 mRNA CTD PMID:32156529 Pcp4l1 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of PCP4L1 mRNA CTD PMID:34947998|PMID:38750585 Pcp4l1 Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of PCP4L1 gene CTD PMID:28505145 Pcp4l1 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of PCP4L1 mRNA CTD PMID:25181051|PMID:32145629 Pcp4l1 Rat bisphenol F decreases expression ISO Pcp4l1 (Mus musculus) 6480464 bisphenol F results in decreased expression of PCP4L1 mRNA CTD PMID:30951980 Pcp4l1 Rat butanal increases expression ISO PCP4L1 (Homo sapiens) 6480464 butyraldehyde results in increased expression of PCP4L1 mRNA CTD PMID:26079696 Pcp4l1 Rat Butylbenzyl phthalate decreases expression ISO Pcp4l1 (Mus musculus) 6480464 butylbenzyl phthalate results in decreased expression of PCP4L1 mRNA CTD PMID:28392331 Pcp4l1 Rat cadmium dichloride increases expression EXP 6480464 Cadmium Chloride results in increased expression of PCP4L1 mRNA CTD PMID:33453195 Pcp4l1 Rat cadmium dichloride decreases expression ISO PCP4L1 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of PCP4L1 mRNA CTD PMID:38382870 Pcp4l1 Rat cadmium dichloride decreases expression EXP 6480464 Cadmium Chloride results in decreased expression of PCP4L1 mRNA CTD PMID:25993096 Pcp4l1 Rat cantharidin decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Cantharidin results in decreased expression of PCP4L1 mRNA CTD PMID:36907384 Pcp4l1 Rat carbon nanotube increases expression ISO Pcp4l1 (Mus musculus) 6480464 Nanotubes, Carbon analog results in increased expression of PCP4L1 mRNA CTD PMID:25620056 Pcp4l1 Rat carbon nanotube decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Nanotubes, Carbon results in decreased expression of PCP4L1 mRNA CTD PMID:25554681|PMID:25620056 Pcp4l1 Rat chlordecone increases expression ISO Pcp4l1 (Mus musculus) 6480464 Chlordecone results in increased expression of PCP4L1 mRNA CTD PMID:33711761 Pcp4l1 Rat chloroprene decreases expression EXP 6480464 Chloroprene results in decreased expression of PCP4L1 mRNA CTD PMID:23125180 Pcp4l1 Rat chlorpyrifos decreases expression EXP 6480464 Chlorpyrifos results in decreased expression of PCP4L1 mRNA CTD PMID:18668222 Pcp4l1 Rat choline multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression more ... CTD PMID:20938992 Pcp4l1 Rat dextran sulfate decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Dextran Sulfate results in decreased expression of PCP4L1 mRNA CTD PMID:35093514 Pcp4l1 Rat dibenz[a,h]anthracene increases expression ISO Pcp4l1 (Mus musculus) 6480464 1,2,5,6-dibenzanthracene results in increased expression of PCP4L1 mRNA CTD PMID:26377693 Pcp4l1 Rat dichloroacetic acid decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Dichloroacetic Acid results in decreased expression of PCP4L1 mRNA CTD PMID:28962523 Pcp4l1 Rat dorsomorphin multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression more ... CTD PMID:27188386 Pcp4l1 Rat endosulfan decreases expression EXP 6480464 Endosulfan results in decreased expression of PCP4L1 mRNA CTD PMID:29391264 Pcp4l1 Rat ethanol multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 Ethanol affects the expression of and affects the splicing of PCP4L1 mRNA CTD PMID:30319688 Pcp4l1 Rat folic acid multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression more ... CTD PMID:20938992 Pcp4l1 Rat furan decreases expression ISO Pcp4l1 (Mus musculus) 6480464 furan results in decreased expression of PCP4L1 mRNA CTD PMID:24183702 Pcp4l1 Rat gentamycin increases expression EXP 6480464 Gentamicins results in increased expression of PCP4L1 mRNA CTD PMID:33387578 Pcp4l1 Rat hydrogen peroxide multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [Hydrogen Peroxide co-treated with Theophylline] results in increased expression of PCP4L1 protein CTD PMID:18951874 Pcp4l1 Rat indole-3-methanol multiple interactions EXP 6480464 [indole-3-carbinol co-treated with Diethylnitrosamine] results in increased expression of PCP4L1 mRNA CTD PMID:22129741 Pcp4l1 Rat L-methionine multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression more ... CTD PMID:20938992 Pcp4l1 Rat lead(0) affects expression ISO PCP4L1 (Homo sapiens) 6480464 Lead affects the expression of PCP4L1 mRNA CTD PMID:28903495 Pcp4l1 Rat manganese(II) chloride decreases expression EXP 6480464 manganese chloride results in decreased expression of PCP4L1 mRNA CTD PMID:28801915 Pcp4l1 Rat methimazole decreases expression EXP 6480464 Methimazole results in decreased expression of PCP4L1 mRNA CTD PMID:30047161 Pcp4l1 Rat Monobutylphthalate increases expression EXP 6480464 monobutyl phthalate results in increased expression of PCP4L1 mRNA CTD PMID:29162477 Pcp4l1 Rat N-nitrosodiethylamine multiple interactions EXP 6480464 [indole-3-carbinol co-treated with Diethylnitrosamine] results in increased expression of PCP4L1 mRNA CTD PMID:22129741 Pcp4l1 Rat N-nitrosomorpholine increases expression EXP 6480464 N-nitrosomorpholine results in increased expression of PCP4L1 mRNA CTD PMID:19716841 Pcp4l1 Rat nevirapine decreases expression EXP 6480464 Nevirapine results in decreased expression of PCP4L1 mRNA CTD PMID:23947594 Pcp4l1 Rat nitrates multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of PCP4L1 more ... CTD PMID:35964746 Pcp4l1 Rat okadaic acid increases expression ISO PCP4L1 (Homo sapiens) 6480464 Okadaic Acid results in increased expression of PCP4L1 mRNA CTD PMID:38832940 Pcp4l1 Rat orphenadrine affects expression EXP 6480464 Orphenadrine affects the expression of PCP4L1 mRNA CTD PMID:23665939 Pcp4l1 Rat ozone decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Ozone results in decreased expression of PCP4L1 mRNA CTD PMID:12763052|PMID:33026818 Pcp4l1 Rat ozone multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in decreased more ... CTD PMID:34911549 Pcp4l1 Rat panobinostat multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression more ... CTD PMID:27188386 Pcp4l1 Rat paracetamol affects expression ISO Pcp4l1 (Mus musculus) 6480464 Acetaminophen affects the expression of PCP4L1 mRNA CTD PMID:17562736 Pcp4l1 Rat paraquat decreases expression EXP 6480464 Paraquat results in decreased expression of PCP4L1 mRNA CTD PMID:32680482 Pcp4l1 Rat parathion increases expression ISO Pcp4l1 (Mus musculus) 6480464 Parathion results in increased expression of PCP4L1 mRNA CTD PMID:34813904 Pcp4l1 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Pectins] results in decreased expression of PCP4L1 mRNA CTD PMID:36331819 Pcp4l1 Rat phenobarbital multiple interactions ISO Pcp4l1 (Mus musculus) 6480464 NR1I3 protein affects the reaction [Phenobarbital results in increased expression of PCP4L1 mRNA] CTD PMID:19482888 Pcp4l1 Rat phenobarbital decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Phenobarbital results in decreased expression of PCP4L1 mRNA CTD PMID:23091169 Pcp4l1 Rat phenobarbital increases expression ISO Pcp4l1 (Mus musculus) 6480464 Phenobarbital results in increased expression of PCP4L1 mRNA CTD PMID:19482888 Pcp4l1 Rat pirinixic acid decreases expression ISO Pcp4l1 (Mus musculus) 6480464 pirinixic acid results in decreased expression of PCP4L1 mRNA CTD PMID:23811191 Pcp4l1 Rat pregnenolone 16alpha-carbonitrile decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Pregnenolone Carbonitrile results in decreased expression of PCP4L1 mRNA CTD PMID:28903501 Pcp4l1 Rat rac-lactic acid increases expression ISO PCP4L1 (Homo sapiens) 6480464 Lactic Acid results in increased expression of PCP4L1 mRNA CTD PMID:30851411 Pcp4l1 Rat rotenone affects expression EXP 6480464 Rotenone affects the expression of PCP4L1 mRNA CTD PMID:28374803 Pcp4l1 Rat SB 431542 multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression more ... CTD PMID:27188386 Pcp4l1 Rat sevoflurane increases expression ISO Pcp4l1 (Mus musculus) 6480464 Sevoflurane results in increased expression of PCP4L1 protein CTD PMID:35249202 Pcp4l1 Rat silver atom affects expression ISO Pcp4l1 (Mus musculus) 6480464 Silver affects the expression of PCP4L1 mRNA CTD PMID:27131904 Pcp4l1 Rat silver(0) affects expression ISO Pcp4l1 (Mus musculus) 6480464 Silver affects the expression of PCP4L1 mRNA CTD PMID:27131904 Pcp4l1 Rat sodium arsenate increases expression ISO Pcp4l1 (Mus musculus) 6480464 sodium arsenate results in increased expression of PCP4L1 mRNA CTD PMID:39847705 Pcp4l1 Rat sodium arsenite decreases expression ISO PCP4L1 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of PCP4L1 mRNA CTD PMID:29301061 Pcp4l1 Rat sodium arsenite increases expression ISO PCP4L1 (Homo sapiens) 6480464 sodium arsenite results in increased expression of PCP4L1 mRNA CTD PMID:38568856 Pcp4l1 Rat sulforaphane increases expression ISO Pcp4l1 (Mus musculus) 6480464 sulforaphane results in increased expression of PCP4L1 mRNA CTD PMID:30529165 Pcp4l1 Rat sunitinib decreases expression ISO PCP4L1 (Homo sapiens) 6480464 Sunitinib results in decreased expression of PCP4L1 mRNA CTD PMID:31533062 Pcp4l1 Rat testosterone decreases expression ISO Pcp4l1 (Mus musculus) 6480464 Testosterone results in decreased expression of PCP4L1 mRNA CTD PMID:20844152 Pcp4l1 Rat tetraphene increases expression ISO Pcp4l1 (Mus musculus) 6480464 benz(a)anthracene results in increased expression of PCP4L1 mRNA CTD PMID:26377693 Pcp4l1 Rat Theaflavin 3,3'-digallate affects expression ISO PCP4L1 (Homo sapiens) 6480464 theaflavin-3,3'-digallate affects the expression of PCP4L1 mRNA CTD PMID:34925699 Pcp4l1 Rat theophylline multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [Hydrogen Peroxide co-treated with Theophylline] results in increased expression of PCP4L1 protein CTD PMID:18951874 Pcp4l1 Rat thioacetamide decreases expression EXP 6480464 Thioacetamide results in decreased expression of PCP4L1 mRNA CTD PMID:34492290 Pcp4l1 Rat titanium dioxide decreases expression ISO Pcp4l1 (Mus musculus) 6480464 titanium dioxide results in decreased expression of PCP4L1 mRNA CTD PMID:23557971 Pcp4l1 Rat titanium dioxide decreases methylation ISO Pcp4l1 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of PCP4L1 gene CTD PMID:35295148 Pcp4l1 Rat trichostatin A increases expression ISO PCP4L1 (Homo sapiens) 6480464 trichostatin A results in increased expression of PCP4L1 mRNA CTD PMID:24935251 Pcp4l1 Rat Triptolide affects expression ISO Pcp4l1 (Mus musculus) 6480464 triptolide affects the expression of PCP4L1 mRNA CTD PMID:32835833 Pcp4l1 Rat valproic acid increases expression ISO Pcp4l1 (Mus musculus) 6480464 Valproic Acid results in increased expression of PCP4L1 mRNA CTD PMID:21427059 Pcp4l1 Rat valproic acid multiple interactions ISO PCP4L1 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased more ... CTD PMID:27188386 Pcp4l1 Rat valproic acid increases expression ISO PCP4L1 (Homo sapiens) 6480464 Valproic Acid results in increased expression of PCP4L1 mRNA CTD PMID:23179753|PMID:24383497|PMID:24935251|PMID:25192806|PMID:26272509|PMID:28001369 Pcp4l1 Rat valproic acid decreases methylation ISO PCP4L1 (Homo sapiens) 6480464 Valproic Acid results in decreased methylation of PCP4L1 gene CTD PMID:29154799 Pcp4l1 Rat valproic acid affects expression ISO PCP4L1 (Homo sapiens) 6480464 Valproic Acid affects the expression of PCP4L1 mRNA CTD PMID:25979313 Pcp4l1 Rat vinclozolin increases expression EXP 6480464 vinclozolin results in increased expression of PCP4L1 mRNA CTD PMID:23034163 Pcp4l1 Rat vinclozolin increases methylation EXP 6480464 vinclozolin results in increased methylation of PCP4L1 gene CTD PMID:31079544 Pcp4l1 Rat vinclozolin decreases methylation EXP 6480464 vinclozolin results in decreased methylation of PCP4L1 gene CTD PMID:31682807
17beta-estradiol (EXP,ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO) 2-hydroxypropanoic acid (ISO) 3,3',4,4',5-pentachlorobiphenyl (ISO) 3,4-methylenedioxymethamphetamine (ISO) 4,4'-sulfonyldiphenol (ISO) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (EXP) aflatoxin B1 (EXP) aflatoxin M1 (ISO) benzo[a]pyrene (EXP,ISO) benzo[b]fluoranthene (ISO) Benzo[k]fluoranthene (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) bisphenol F (ISO) butanal (ISO) Butylbenzyl phthalate (ISO) cadmium dichloride (EXP,ISO) cantharidin (ISO) carbon nanotube (ISO) chlordecone (ISO) chloroprene (EXP) chlorpyrifos (EXP) choline (ISO)
References
Additional References at PubMed
Genomics
Comparative Map Data
Pcp4l1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 13 86,121,463 - 86,145,097 (-) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 13 86,121,464 - 86,144,899 (-) Ensembl GRCr8 mRatBN7.2 13 83,588,992 - 83,612,631 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 13 83,588,992 - 83,609,966 (-) Ensembl mRatBN7.2 UTH_Rnor_SHR_Utx 13 86,094,718 - 86,118,283 (-) NCBI UTH_Rnor_SHR_Utx UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 13 87,492,955 - 87,516,526 (-) NCBI UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 13 84,724,551 - 84,747,967 (-) NCBI UTH_Rnor_WKY_Bbb_1.0 UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 13 89,542,377 - 89,565,920 (-) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 13 89,542,378 - 89,565,813 (-) Ensembl rn6 Rnor6.0 Rnor_5.0 13 94,169,877 - 94,192,679 (-) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 13 87,059,476 - 87,083,085 (-) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 13 83,220,194 - 83,243,617 (-) NCBI Celera Cytogenetic Map 13 q24 NCBI
PCP4L1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 161,258,745 - 161,285,450 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 161,258,136 - 161,285,450 (+) Ensembl hg38 GRCh38 GRCh37 1 161,228,535 - 161,255,240 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 159,495,141 - 159,521,864 (+) NCBI Build 36 Build 36 hg18 NCBI36 Celera 1 134,295,731 - 134,322,384 (+) NCBI Celera Cytogenetic Map 1 q23.3 NCBI HuRef 1 132,585,466 - 132,612,114 (+) NCBI HuRef CHM1_1 1 162,624,748 - 162,651,470 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 160,396,195 - 160,422,865 (+) NCBI T2T-CHM13v2.0
Pcp4l1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 171,000,833 - 171,023,837 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 171,000,831 - 171,023,837 (-) Ensembl GRCm39 Ensembl GRCm39 GRCm38 1 171,173,264 - 171,196,268 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 171,173,262 - 171,196,268 (-) Ensembl mm10 GRCm38 MGSCv37 1 173,103,395 - 173,126,399 (-) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 1 173,009,934 - 173,042,355 (-) NCBI MGSCv36 mm8 Celera 1 173,621,388 - 173,644,321 (-) NCBI Celera Cytogenetic Map 1 H3 NCBI cM Map 1 79.11 NCBI
Pcp4l1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955468 13,004,267 - 13,022,686 (+) Ensembl ChiLan1.0 NW_004955468 13,004,267 - 13,022,686 (+) NCBI ChiLan1.0 ChiLan1.0
PCP4L1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 88,568,411 - 88,593,565 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 88,258,694 - 88,283,850 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 136,670,879 - 136,696,039 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 140,582,726 - 140,607,520 (+) NCBI PanPan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 140,582,726 - 140,607,520 (+) Ensembl panPan2 panpan1.1
PCP4L1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 38 21,221,334 - 21,242,578 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 38 21,222,253 - 21,243,195 (-) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha 38 21,296,228 - 21,317,391 (-) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 38 21,339,195 - 21,360,343 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 38 21,340,108 - 21,360,423 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 38 21,236,310 - 21,257,456 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 38 21,642,402 - 21,663,571 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 38 22,050,868 - 22,072,046 (-) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
Pcp4l1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
PCP4L1 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 89,186,447 - 89,213,114 (-) Ensembl susScr11 Sscrofa11.1 Sscrofa11.1 4 89,186,445 - 89,212,852 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 97,044,311 - 97,069,529 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PCP4L1 (Chlorocebus sabaeus - green monkey)
Pcp4l1 (Heterocephalus glaber - naked mole-rat)
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 348 Count of miRNA genes: 200 Interacting mature miRNAs: 240 Transcripts: ENSRNOT00000004347 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction