Tctn2 (tectonic family member 2) - Rat Genome Database

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Gene: Tctn2 (tectonic family member 2) Rattus norvegicus
Analyze
Symbol: Tctn2 (Ensembl: Dnah10)
Name: tectonic family member 2 (Ensembl:dynein, axonemal, heavy chain 10)
RGD ID: 1591895
Description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in cilium assembly; protein localization to ciliary transition zone; and smoothened signaling pathway. Predicted to be located in ciliary transition zone. Predicted to be part of MKS complex. Human ortholog(s) of this gene implicated in Joubert syndrome 24 and Meckel syndrome 8. Orthologous to human TCTN2 (tectonic family member 2); INTERACTS WITH ammonium chloride; bisphenol A; furan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: LOC689779; similar to tectonic 2; Tect2; tectonic 2; tectonic-2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81237,643,711 - 37,668,035 (-)NCBIGRCr8
mRatBN7.21231,982,440 - 32,007,242 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1231,822,733 - 32,007,069 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1233,161,467 - 33,185,794 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01233,772,784 - 33,797,115 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01232,824,655 - 32,848,982 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01237,400,896 - 37,427,256 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1237,363,906 - 37,425,596 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01239,272,247 - 39,296,609 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41233,095,370 - 33,119,921 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1233,672,972 - 33,696,471 (-)NCBICelera
Cytogenetic Map12q15NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. GOA pipeline RGD automated data pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:15489334   PMID:21565611   PMID:21725307   PMID:22179047   PMID:26982032   PMID:29487109   PMID:34623606  


Genomics

Comparative Map Data
Tctn2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81237,643,711 - 37,668,035 (-)NCBIGRCr8
mRatBN7.21231,982,440 - 32,007,242 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1231,822,733 - 32,007,069 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1233,161,467 - 33,185,794 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01233,772,784 - 33,797,115 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01232,824,655 - 32,848,982 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01237,400,896 - 37,427,256 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1237,363,906 - 37,425,596 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01239,272,247 - 39,296,609 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41233,095,370 - 33,119,921 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1233,672,972 - 33,696,471 (-)NCBICelera
Cytogenetic Map12q15NCBI
TCTN2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812123,671,113 - 123,708,399 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12123,671,110 - 123,708,399 (+)EnsemblGRCh38hg38GRCh38
GRCh3712124,155,660 - 124,192,946 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3612122,721,644 - 122,758,901 (+)NCBINCBI36Build 36hg18NCBI36
Celera12123,752,100 - 123,789,208 (+)NCBICelera
Cytogenetic Map12q24.31NCBI
HuRef12121,116,926 - 121,154,126 (+)NCBIHuRef
CHM1_112123,976,610 - 124,013,901 (+)NCBICHM1_1
T2T-CHM13v2.012123,669,981 - 123,707,267 (+)NCBIT2T-CHM13v2.0
Tctn2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395124,736,812 - 124,765,803 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5124,736,812 - 124,765,803 (+)EnsemblGRCm39 Ensembl
GRCm385124,598,749 - 124,627,738 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5124,598,749 - 124,627,738 (+)EnsemblGRCm38mm10GRCm38
MGSCv375125,048,758 - 125,085,577 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365122,698,324 - 122,727,198 (+)NCBIMGSCv36mm8
MGSCv365124,859,402 - 124,888,267 (+)NCBIMGSCv36mm8
Celera5121,675,604 - 121,704,272 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map563.68NCBI
Tctn2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554825,342,821 - 5,362,426 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554825,344,113 - 5,362,519 (-)NCBIChiLan1.0ChiLan1.0
TCTN2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210131,746,058 - 131,783,519 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112131,742,469 - 131,779,896 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012121,256,675 - 121,293,997 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112125,482,294 - 125,518,903 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12125,482,294 - 125,518,903 (+)Ensemblpanpan1.1panPan2
TCTN2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1265,954,302 - 5,979,853 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl265,954,738 - 5,979,750 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha266,117,168 - 6,142,741 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0266,204,343 - 6,229,951 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl266,162,010 - 6,229,946 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1266,137,867 - 6,163,444 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0266,230,005 - 6,255,237 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0266,183,423 - 6,209,002 (-)NCBIUU_Cfam_GSD_1.0
Tctn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118158,310,657 - 158,336,824 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365581,142,598 - 1,168,881 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365581,142,608 - 1,168,755 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCTN2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1429,297,881 - 29,332,720 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11429,301,848 - 29,333,063 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21430,994,144 - 31,025,325 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TCTN2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111119,000,590 - 119,038,601 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11119,000,632 - 119,038,607 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037126,237,359 - 126,275,320 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tctn2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474723,439,647 - 23,470,470 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Tctn2
111 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
1300175Cm5Cardiac mass QTL 53.78heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)122806443345899022Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1331787Rf41Renal function QTL 412.998kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)122806455740218380Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
1556747Calcic1Intracellular calcium level QTL 13.6platelet calcium amount (VT:0010500)platelet intracellular calcium level (CMO:0000922)122806443340130419Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600386Calcic2Intracellular calcium level QTL 20.001platelet physiology trait (VT:0005464)platelet intracellular calcium level (CMO:0000922)122806443346669029Rat
631829Alc6Alcohol consumption QTL 64.7consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)122860752637691617Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
70169Eae13Experimental allergic encephalomyelitis QTL 130.032nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)122413920236638073Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat

Markers in Region
BF395959  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21231,986,499 - 31,986,623 (+)MAPPERmRatBN7.2
Rnor_6.01237,404,956 - 37,405,079NCBIRnor6.0
Rnor_5.01239,276,021 - 39,276,144UniSTSRnor5.0
RGSC_v3.41233,099,144 - 33,099,267UniSTSRGSC3.4
Celera1233,676,746 - 33,676,869UniSTS
RH 3.4 Map12550.9UniSTS
Cytogenetic Map12q15UniSTS
AU049553  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21231,989,922 - 31,990,125 (+)MAPPERmRatBN7.2
Rnor_6.01237,408,379 - 37,408,581NCBIRnor6.0
Rnor_5.01239,279,444 - 39,279,646UniSTSRnor5.0
RGSC_v3.41233,102,567 - 33,102,769UniSTSRGSC3.4
Celera1233,680,169 - 33,680,367UniSTS
Cytogenetic Map12q15UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 24 19 6 18 6 70 24 40 11
Low 19 38 35 1 35 8 11 4 11 1 8
Below cutoff

Sequence


RefSeq Acc Id: NM_001080782   ⟹   NP_001074251
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81237,643,711 - 37,668,035 (-)NCBI
mRatBN7.21231,982,726 - 32,007,050 (-)NCBI
Rnor_6.01237,401,182 - 37,425,596 (-)NCBI
Rnor_5.01239,272,247 - 39,296,609 (-)NCBI
RGSC_v3.41233,095,370 - 33,119,921 (-)RGD
Celera1233,672,972 - 33,696,471 (-)RGD
Sequence:
RefSeq Acc Id: XM_063271674   ⟹   XP_063127744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81237,643,711 - 37,667,113 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001074251 (Get FASTA)   NCBI Sequence Viewer  
  XP_063127744 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI07659 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000072568
  ENSRNOP00000072568.1
  ENSRNOP00000073487.2
  ENSRNOP00000084529.1
  ENSRNOP00000093343.1
  ENSRNOP00000095339.1
GenBank Protein Q3B7D3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001074251   ⟸   NM_001080782
- Peptide Label: precursor
- UniProtKB: Q3B7D3 (UniProtKB/Swiss-Prot),   A0A8I6GK91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_063127744   ⟸   XM_063271674
- Peptide Label: isoform X1
Protein Domains
AAA+ ATPase   Tectonic

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3B7D3-F1-model_v2 AlphaFold Q3B7D3 1-700 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13698606
Promoter ID:EPDNEW_R9130
Type:single initiation site
Name:Tctn2_2
Description:tectonic family member 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_R9129  
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01237,425,616 - 37,425,676EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1591895 AgrOrtholog
BioCyc Gene G2FUF-19364 BioCyc
Ensembl Genes ENSRNOG00000052704 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000084553 ENTREZGENE
  ENSRNOT00000084553.2 UniProtKB/Swiss-Prot
  ENSRNOT00000087698.2 UniProtKB/TrEMBL
  ENSRNOT00000106066.1 UniProtKB/TrEMBL
  ENSRNOT00000108577.1 UniProtKB/TrEMBL
  ENSRNOT00000110165.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.2620 UniProtKB/TrEMBL
  1.10.8.1220 UniProtKB/TrEMBL
  1.10.8.710 UniProtKB/TrEMBL
  1.20.1270.280 UniProtKB/TrEMBL
  1.20.58.1120 UniProtKB/TrEMBL
  1.20.920.20 UniProtKB/TrEMBL
  1.20.920.30 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  6.10.140.1060 UniProtKB/TrEMBL
  Dynein heavy chain, N-terminal domain 2 UniProtKB/TrEMBL
  Dynein heavy chain, N-terminal domain 2 UniProtKB/TrEMBL
  P-loop containing nucleotide triphosphate hydrolases UniProtKB/TrEMBL
  Region D6 of dynein motor UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7936140 IMAGE-MGC_LOAD
InterPro AAA+_ATPase UniProtKB/TrEMBL
  AAA_6 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  ATPase_V0/A0-cplx_116kDa_su UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  DUF1619 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_D6_P-loop UniProtKB/TrEMBL
  Dynein_heavy_linker UniProtKB/TrEMBL
  Dynein_heavy_tail UniProtKB/TrEMBL
  Dynein_linker_3 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Tectonic UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:689779 UniProtKB/Swiss-Prot
MGC_CLONE MGC:124715 IMAGE-MGC_LOAD
NCBI Gene Tctn2 ENTREZGENE
PANTHER ATPase_V0/A0_116 UniProtKB/TrEMBL
  DYNEIN HEAVY CHAIN UniProtKB/TrEMBL
  DYNEIN HEAVY CHAIN, CYTOPLASMIC UniProtKB/TrEMBL
  PTHR14611 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TECTONIC-2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-TYPE PROTON ATPASE 116 KDA SUBUNIT A2 UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_7 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N1 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  DUF1619 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
  V_ATPase_I UniProtKB/TrEMBL
PhenoGen Tctn2 PhenoGen
RatGTEx ENSRNOG00000052704 RatGTEx
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL
UniProt A0A0G2K5M9_RAT UniProtKB/TrEMBL
  A0A8I6A269_RAT UniProtKB/TrEMBL
  A0A8I6GK91 ENTREZGENE, UniProtKB/TrEMBL
  Q3B7D3 ENTREZGENE
  Q7TP16_RAT UniProtKB/TrEMBL
  TECT2_RAT UniProtKB/Swiss-Prot
UniProt Secondary F1LR83 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-16 Tctn2  tectonic family member 2  Tect2  tectonic 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-07-08 Tect2  tectonic 2  LOC687530  similar to tectonic 2  Data merged from RGD:1584235 1643240 APPROVED
2007-02-05 Tect2  tectonic 2  LOC689779  similar to tectonic 2  Data merged from RGD:1588709 737654 APPROVED
2006-11-20 Tect2  tectonic 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC689779  similar to tectonic 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC687530  similar to tectonic 2      Symbol and Name status set to provisional 70820 PROVISIONAL