Gene: Nkpd1 (NTPase, KAP family P-loop domain containing 1) Rattus norvegicus
Analyze
Symbol:
Nkpd1
Name:
NTPase, KAP family P-loop domain containing 1
RGD ID:
1591760
Description:
Predicted to be located in membrane. Orthologous to human NKPD1 (NTPase KAP family P-loop domain containing 1); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC680440; NTPase KAP family P-loop domain-containing protein 1; similar to NTPase, KAP family P-loop domain containing 1
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
NKPD1 (NTPase KAP family P-loop domain containing 1) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):
Nkpd1 (NTPase, KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
NKPD1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
NKPD1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Nkpd1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
NKPD1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
NKPD1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Nkpd1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus rattus (black rat):
Nkpd1 (NTPase KAP family P-loop domain containing 1) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
ATPAF2 (ATP synthase mitochondrial F1 complex assembly factor 2) HGNC
OMA
Alliance orthologs 3
Homo sapiens (human):
NKPD1 (NTPase KAP family P-loop domain containing 1)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Nkpd1 (NTPase, KAP family P-loop domain containing 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
nkpd1 (NTPase, KAP family P-loop domain containing 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Danio rerio (zebrafish):
nkpd1 (NTPase, KAP family P-loop domain containing 1)
Alliance
DIOPT (Ensembl Compara|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
nkpd1
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
nkpd1
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
XB5936512 [provisional]
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 88,293,626 - 88,303,117 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 1 88,295,091 - 88,302,224 (+) Ensembl GRCr8 mRatBN7.2 1 79,165,642 - 79,175,126 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 79,167,130 - 79,174,234 (+) Ensembl mRatBN7.2 Rnor_6.0 1 80,424,507 - 80,434,137 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 80,426,918 - 80,432,875 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 1 81,690,528 - 81,700,156 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 1 78,871,611 - 78,877,568 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 1 73,625,165 - 73,634,793 (+) NCBI Celera Cytogenetic Map 1 q21 NCBI
JBrowse:
Only show annotations with direct experimental evidence (0 objects hidden)
Nkpd1 Rat 1,2-dimethylhydrazine increases expression ISO Nkpd1 (Mus musculus) 6480464 1,2-Dimethylhydrazine results in increased expression of NKPD1 mRNA CTD PMID:22206623 Nkpd1 Rat 1-naphthyl isothiocyanate increases expression EXP 6480464 1-Naphthylisothiocyanate results in increased expression of NKPD1 mRNA CTD PMID:30723492 Nkpd1 Rat 17beta-estradiol multiple interactions ISO NKPD1 (Homo sapiens) 6480464 [Estradiol co-treated with TGFB1 protein] results in decreased expression of NKPD1 mRNA CTD PMID:30165855 Nkpd1 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of NKPD1 mRNA CTD PMID:33387578 Nkpd1 Rat 2-hydroxypropanoic acid decreases expression ISO NKPD1 (Homo sapiens) 6480464 Lactic Acid results in decreased expression of NKPD1 mRNA CTD PMID:30851411 Nkpd1 Rat 4,4'-sulfonyldiphenol multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:36041667 Nkpd1 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of NKPD1 mRNA CTD PMID:24780913|PMID:30047161 Nkpd1 Rat aldehydo-D-glucose multiple interactions ISO Nkpd1 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose more ... CTD PMID:37567420 Nkpd1 Rat aldehydo-D-glucose increases expression ISO Nkpd1 (Mus musculus) 6480464 Glucose results in increased expression of NKPD1 mRNA CTD PMID:39922521 Nkpd1 Rat aristolochic acid A decreases expression ISO NKPD1 (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of NKPD1 mRNA CTD PMID:33212167 Nkpd1 Rat avobenzone decreases expression ISO NKPD1 (Homo sapiens) 6480464 avobenzone results in decreased expression of NKPD1 mRNA CTD PMID:31016361 Nkpd1 Rat benzo[a]pyrene increases expression ISO Nkpd1 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of NKPD1 mRNA CTD PMID:21569818 Nkpd1 Rat benzo[a]pyrene decreases expression ISO NKPD1 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of NKPD1 mRNA CTD PMID:32234424 Nkpd1 Rat benzo[a]pyrene affects methylation ISO NKPD1 (Homo sapiens) 6480464 Benzo(a)pyrene affects the methylation of NKPD1 3' UTR; Benzo(a)pyrene affects the methylation of NKPD1 promoter CTD PMID:27901495 Nkpd1 Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:36041667 Nkpd1 Rat bisphenol F multiple interactions EXP 6480464 [bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in increased expression of more ... CTD PMID:36041667 Nkpd1 Rat cisplatin decreases expression ISO NKPD1 (Homo sapiens) 6480464 Cisplatin results in decreased expression of NKPD1 mRNA CTD PMID:27392435 Nkpd1 Rat Cuprizon decreases expression EXP 6480464 Cuprizone results in decreased expression of NKPD1 mRNA CTD PMID:26577399 Nkpd1 Rat D-glucose multiple interactions ISO Nkpd1 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose more ... CTD PMID:37567420 Nkpd1 Rat D-glucose increases expression ISO Nkpd1 (Mus musculus) 6480464 Glucose results in increased expression of NKPD1 mRNA CTD PMID:39922521 Nkpd1 Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of NKPD1 mRNA CTD PMID:29391264 Nkpd1 Rat fructose multiple interactions ISO Nkpd1 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose more ... CTD PMID:37567420 Nkpd1 Rat genistein decreases expression ISO Nkpd1 (Mus musculus) 6480464 Genistein results in decreased expression of NKPD1 mRNA CTD PMID:32186404 Nkpd1 Rat glucose multiple interactions ISO Nkpd1 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose more ... CTD PMID:37567420 Nkpd1 Rat glucose increases expression ISO Nkpd1 (Mus musculus) 6480464 Glucose results in increased expression of NKPD1 mRNA CTD PMID:39922521 Nkpd1 Rat glyphosate decreases methylation EXP 6480464 Glyphosate results in decreased methylation of NKPD1 gene CTD PMID:31011160 Nkpd1 Rat herbicide multiple interactions ISO Nkpd1 (Mus musculus) 6480464 [lard co-treated with Cholesterol, Dietary co-treated with Dietary Sucrose co-treated with Fructose co-treated with Glucose more ... CTD PMID:37567420 Nkpd1 Rat lipopolysaccharide multiple interactions ISO NKPD1 (Homo sapiens) 6480464 [S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in increased expression of NKPD1 mRNA CTD PMID:35811015 Nkpd1 Rat methimazole increases expression EXP 6480464 Methimazole results in increased expression of NKPD1 mRNA CTD PMID:30047161 Nkpd1 Rat O-methyleugenol decreases expression ISO NKPD1 (Homo sapiens) 6480464 methyleugenol results in decreased expression of NKPD1 mRNA CTD PMID:32234424 Nkpd1 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of NKPD1 mRNA CTD PMID:33387578 Nkpd1 Rat potassium dichromate decreases expression ISO Nkpd1 (Mus musculus) 6480464 Potassium Dichromate results in decreased expression of NKPD1 mRNA CTD PMID:23608068 Nkpd1 Rat rac-lactic acid decreases expression ISO NKPD1 (Homo sapiens) 6480464 Lactic Acid results in decreased expression of NKPD1 mRNA CTD PMID:30851411 Nkpd1 Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO NKPD1 (Homo sapiens) 6480464 [S-(1,2-dichlorovinyl)cysteine co-treated with Lipopolysaccharides] results in increased expression of NKPD1 mRNA CTD PMID:35811015 Nkpd1 Rat sulfadimethoxine increases expression EXP 6480464 Sulfadimethoxine results in increased expression of NKPD1 mRNA CTD PMID:30047161 Nkpd1 Rat titanium dioxide decreases methylation ISO Nkpd1 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of NKPD1 gene CTD PMID:35295148 Nkpd1 Rat trichloroethene increases expression EXP 6480464 Trichloroethylene results in increased expression of NKPD1 mRNA CTD PMID:33387578 Nkpd1 Rat trimellitic anhydride decreases expression ISO Nkpd1 (Mus musculus) 6480464 trimellitic anhydride results in decreased expression of NKPD1 mRNA CTD PMID:19042947 Nkpd1 Rat triptonide increases expression ISO Nkpd1 (Mus musculus) 6480464 triptonide results in increased expression of NKPD1 mRNA CTD PMID:33045310 Nkpd1 Rat valproic acid increases methylation ISO NKPD1 (Homo sapiens) 6480464 Valproic Acid results in increased methylation of NKPD1 gene CTD PMID:29154799
References
Genomics
Comparative Map Data
Nkpd1 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 1 88,293,626 - 88,303,117 (+) NCBI GRCr8 GRCr8 GRCr8 GRCr8 Ensembl 1 88,295,091 - 88,302,224 (+) Ensembl GRCr8 mRatBN7.2 1 79,165,642 - 79,175,126 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 1 79,167,130 - 79,174,234 (+) Ensembl mRatBN7.2 Rnor_6.0 1 80,424,507 - 80,434,137 (+) NCBI Rnor_6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 1 80,426,918 - 80,432,875 (+) Ensembl rn6 Rnor6.0 Rnor_5.0 1 81,690,528 - 81,700,156 (+) NCBI Rnor_5.0 Rnor_5.0 rn5 RGSC_v3.4 1 78,871,611 - 78,877,568 (+) NCBI RGSC_v3.4 RGSC_v3.4 rn4 Celera 1 73,625,165 - 73,634,793 (+) NCBI Celera Cytogenetic Map 1 q21 NCBI
NKPD1 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 19 45,149,744 - 45,162,841 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 19 45,149,744 - 45,160,982 (-) Ensembl hg38 GRCh38 GRCh37 19 45,653,002 - 45,664,240 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 19 50,347,001 - 50,348,950 (-) NCBI Build 36 Build 36 hg18 NCBI36 Build 34 19 50,346,782 - 50,348,869 NCBI Celera 19 42,457,268 - 42,467,668 (-) NCBI Celera Cytogenetic Map 19 q13.32 NCBI HuRef 19 42,083,153 - 42,093,553 (-) NCBI HuRef CHM1_1 19 45,656,299 - 45,666,699 (-) NCBI CHM1_1 T2T-CHM13v2.0 19 47,974,875 - 47,987,974 (-) NCBI T2T-CHM13v2.0
Nkpd1 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 7 19,251,404 - 19,258,982 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 7 19,251,763 - 19,258,981 (+) Ensembl GRCm39 Ensembl GRCm39 GRCm38 7 19,517,491 - 19,525,057 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 7 19,517,838 - 19,525,056 (+) Ensembl mm10 GRCm38 MGSCv37 7 20,104,080 - 20,110,399 (+) NCBI MGSCv37 MGSCv37 mm9 NCBIm37 MGSCv36 7 18,677,253 - 18,683,297 (+) NCBI MGSCv36 mm8 Celera 7 16,924,662 - 16,930,981 (+) NCBI Celera Cytogenetic Map 7 A3 NCBI cM Map 7 9.92 NCBI
NKPD1 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 20 51,308,253 - 51,322,174 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 19 53,179,741 - 53,193,600 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 19 42,096,345 - 42,110,023 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 19 50,702,300 - 50,711,311 (-) NCBI PanPan1.1 PanPan1.1 panPan2
NKPD1 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 110,341,639 - 110,349,415 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 110,341,502 - 110,349,127 (+) Ensembl canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 109,820,189 - 109,831,308 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 110,868,594 - 110,879,720 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 UMICH_Zoey_3.1 1 110,544,170 - 110,555,282 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 110,178,819 - 110,189,933 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 111,048,010 - 111,059,144 (+) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
Nkpd1 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024409349 17,337,557 - 17,345,094 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936706 1,684,824 - 1,688,383 (-) Ensembl SpeTri2.0 Ensembl SpeTri2.0 NW_004936706 1,685,113 - 1,691,897 (-) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
NKPD1
NKPD1
Nkpd1
Nkpd1
miRNA Target Status (No longer updated)
Predicted Target Of
Count of predictions: 163 Count of miRNA genes: 135 Interacting mature miRNAs: 146 Transcripts: ENSRNOT00000067272 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction 
