Sohlh2 (spermatogenesis and oogenesis specific basic helix-loop-helix 2) - Rat Genome Database

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Gene: Sohlh2 (spermatogenesis and oogenesis specific basic helix-loop-helix 2) Rattus norvegicus
Analyze
Symbol: Sohlh2
Name: spermatogenesis and oogenesis specific basic helix-loop-helix 2
RGD ID: 1589577
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and protein dimerization activity. Predicted to be involved in cell differentiation; positive regulation of transcription by RNA polymerase II; and spermatogenesis. Predicted to act upstream of or within oocyte differentiation; primary ovarian follicle growth; and regulation of gene expression. Predicted to be active in nucleus. Orthologous to several human genes including SOHLH2 (spermatogenesis and oogenesis specific basic helix-loop-helix 2); INTERACTS WITH 4-vinylcyclohexene dioxide; bis(2-ethylhexyl) phthalate; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: hypothetical protein LOC619575; LOC295054; LOC619575; RGD1304752; similar to RIKEN cDNA 4933406N12; spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82141,512,410 - 141,534,864 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2141,512,293 - 141,534,863 (+)EnsemblGRCr8
mRatBN7.22139,362,246 - 139,384,700 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2139,362,246 - 139,384,699 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2145,937,104 - 145,959,408 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02144,048,536 - 144,070,836 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02138,680,966 - 138,703,265 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02144,591,755 - 144,614,065 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2144,591,755 - 144,614,064 (+)Ensemblrn6Rnor6.0
Rnor_5.02164,007,688 - 164,029,998 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42144,406,048 - 144,428,502 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2133,845,930 - 133,868,318 (+)NCBICelera
Cytogenetic Map2q26NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
nucleus  (IBA,IEA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:18753606   PMID:22056784   PMID:22328502   PMID:28504655  


Genomics

Comparative Map Data
Sohlh2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82141,512,410 - 141,534,864 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl2141,512,293 - 141,534,863 (+)EnsemblGRCr8
mRatBN7.22139,362,246 - 139,384,700 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2139,362,246 - 139,384,699 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx2145,937,104 - 145,959,408 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02144,048,536 - 144,070,836 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02138,680,966 - 138,703,265 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.02144,591,755 - 144,614,065 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2144,591,755 - 144,614,064 (+)Ensemblrn6Rnor6.0
Rnor_5.02164,007,688 - 164,029,998 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.42144,406,048 - 144,428,502 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera2133,845,930 - 133,868,318 (+)NCBICelera
Cytogenetic Map2q26NCBI
SOHLH2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381336,168,217 - 36,214,556 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1336,168,217 - 36,214,588 (-)Ensemblhg38GRCh38
GRCh371336,742,354 - 36,788,693 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361335,640,354 - 35,686,676 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1317,809,516 - 17,855,920 (-)NCBICelera
Cytogenetic Map13q13.3NCBI
HuRef1317,554,581 - 17,600,987 (-)NCBIHuRef
CHM1_11336,709,919 - 36,756,323 (-)NCBICHM1_1
T2T-CHM13v2.01335,387,717 - 35,434,075 (-)NCBIT2T-CHM13v2.0
Sohlh2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39355,089,465 - 55,117,378 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl355,089,449 - 55,117,378 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38355,182,044 - 55,209,957 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl355,182,028 - 55,209,957 (+)Ensemblmm10GRCm38
MGSCv37354,985,966 - 55,013,879 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36355,269,973 - 55,297,879 (+)NCBIMGSCv36mm8
Celera354,899,830 - 54,927,744 (+)NCBICelera
Cytogenetic Map3CNCBI
cM Map326.53NCBI
Sohlh2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554319,884,173 - 9,942,826 (+)Ensembl
ChiLan1.0NW_0049554319,874,783 - 9,952,044 (+)NCBIChiLan1.0ChiLan1.0
SOHLH2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21435,692,409 - 35,743,843 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11326,798,408 - 26,849,838 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01317,379,900 - 17,426,758 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11335,811,256 - 35,857,611 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1335,812,074 - 35,857,528 (-)EnsemblpanPan2panpan1.1
Sohlh2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945165,559,534 - 165,610,877 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647230,335,290 - 30,392,621 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SOHLH2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1314,753,901 - 14,800,910 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl314,753,989 - 14,834,381 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605729,493,859 - 29,540,194 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sohlh2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247761,192,573 - 1,269,672 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247761,192,539 - 1,273,346 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Sohlh2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1399,231,801 - 99,253,652 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Sohlh2
166 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:101
Count of miRNA genes:81
Interacting mature miRNAs:90
Transcripts:ENSRNOT00000044424
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)2105628029150628029Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845370229470703Rat
1358360Sradr2Stress Responsive Adrenal Weight QTL 210.24adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)2124103798154505346Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)283465462229820014Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)220695736231474293Rat
1298076Bp166Blood pressure QTL 1660.0009arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2138595962205135428Rat
1581576Pur7Proteinuria QTL 70.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)280396178220931218Rat
152025245Scl81Serum cholesterol level QTL 813.49blood cholesterol amount (VT:0000180)2124537199209621565Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)278269809208420281Rat
1554319Bmd2Bone mineral density QTL 213.40.0001lumbar vertebra area (VT:0010570)lumbar vertebra cross-sectional area (CMO:0001689)2122597372215234002Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)227148328145807373Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)280396178220931218Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)24265106205135428Rat
1581502Esta3Estrogen-induced thymic atrophy QTL 3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)2139067258192287892Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1582257Gluco21Glucose level QTL 213.10.0035blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)2120039407159440891Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328159440891Rat
1359035Bp276Blood pressure QTL 276arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)2100807373145807373Rat
8662836Vetf8Vascular elastic tissue fragility QTL 80.66thoracic aorta molecular composition trait (VT:0010568)aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003)2106869825151869825Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)227148557159440760Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)267845182205135428Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)283400752223709938Rat
5135226Leukc2Leukocyte quantity QTL 2eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)2120039407151869825Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)244537979205135428Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)293602631145807373Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)227148328159440891Rat
1359022Ppulsi1Prepulse inhibition QTL 13.63prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)2139067258184067258Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)280396034220931416Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)278269809205135428Rat
634308Sach6Saccharin preference QTL 64.9taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)2114384617215381366Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)227148328206613235Rat
1300165Rf9Renal function QTL 93.28kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)2113746222205135428Rat
7488933Bp368Blood pressure QTL 3680.004arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2104957381149957381Rat
631507Bp105Blood pressure QTL 1050.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2114384617215381366Rat
738007Anxrr7Anxiety related response QTL 74.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2120339555165339555Rat
1354609Niddm62Non-insulin dependent diabetes mellitus QTL 624.720.000006insulin secretion trait (VT:0003564)plasma insulin level (CMO:0000342)2117415288205135428Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979159440891Rat
1581552Pur12Proteinuria QTL 125.190.0009urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)2114032149150226270Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)283465462225110681Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)2114440891159440891Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)247856345205135428Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)244537979184731399Rat
1354594Despr10Despair related QTL 102e-06locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)2116804572161804572Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)230219200171802126Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)276328396209350714Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)230219200171802126Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)261051541143746880Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
6 2 7 11 4 8 2 24 2 1 52 32 10 10 57 6

Sequence


Ensembl Acc Id: ENSRNOT00000044424   ⟹   ENSRNOP00000049772
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2141,512,408 - 141,534,863 (+)Ensembl
mRatBN7.2 Ensembl2139,362,246 - 139,384,699 (+)Ensembl
Rnor_6.0 Ensembl2144,591,755 - 144,614,064 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000110838   ⟹   ENSRNOP00000084522
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2141,518,675 - 141,534,863 (+)Ensembl
mRatBN7.2 Ensembl2139,368,513 - 139,384,699 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000166599   ⟹   ENSRNOP00000107781
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl2141,512,293 - 141,534,863 (+)Ensembl
RefSeq Acc Id: NM_001034961   ⟹   NP_001030133
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82141,512,410 - 141,534,864 (+)NCBI
mRatBN7.22139,362,246 - 139,384,700 (+)NCBI
Rnor_6.02144,591,755 - 144,614,065 (+)NCBI
Rnor_5.02164,007,688 - 164,029,998 (+)NCBI
RGSC_v3.42144,406,048 - 144,428,502 (+)RGD
Celera2133,845,930 - 133,868,318 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001030133 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI04698 (Get FASTA)   NCBI Sequence Viewer  
  EDM14903 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000049772
  ENSRNOP00000049772.3
GenBank Protein Q3MHT3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001030133   ⟸   NM_001034961
- UniProtKB: Q3MHT3 (UniProtKB/Swiss-Prot),   A6JVE9 (UniProtKB/TrEMBL),   A0A8I6A1I4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000049772   ⟸   ENSRNOT00000044424
Ensembl Acc Id: ENSRNOP00000084522   ⟸   ENSRNOT00000110838
Ensembl Acc Id: ENSRNOP00000107781   ⟸   ENSRNOT00000166599
Protein Domains
bHLH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3MHT3-F1-model_v2 AlphaFold Q3MHT3 1-462 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1589577 AgrOrtholog
BioCyc Gene G2FUF-53065 BioCyc
Ensembl Genes ENSRNOG00000038091 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000044424 ENTREZGENE
  ENSRNOT00000044424.4 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7113652 IMAGE-MGC_LOAD
InterPro bHLH_dom UniProtKB/Swiss-Prot
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot
  TCFL5/SOLH1/2 UniProtKB/Swiss-Prot
KEGG Report rno:619575 UniProtKB/Swiss-Prot
MGC_CLONE MGC:125035 IMAGE-MGC_LOAD
NCBI Gene 619575 ENTREZGENE
PANTHER SPERMATOGENESIS- AND OOGENESIS-SPECIFIC BASIC HELIX-LOOP-HELIX-CONTAINING PROTEIN 1 UniProtKB/Swiss-Prot
  TRANSCRIPTION FACTOR-LIKE 5 PROTEIN UniProtKB/Swiss-Prot
Pfam HLH UniProtKB/Swiss-Prot
PhenoGen Sohlh2 PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000038091 RatGTEx
SMART HLH UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot
UniProt A0A8I6A1I4 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LPG1_RAT UniProtKB/TrEMBL
  A6JVE9 ENTREZGENE, UniProtKB/TrEMBL
  Q3MHT3 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-06-15 Sohlh2  spermatogenesis and oogenesis specific basic helix-loop-helix 2  RGD1304752  similar to RIKEN cDNA 4933406N12   Data merged from RGD:1304752 1643240 APPROVED
2008-04-30 RGD1304752  similar to RIKEN cDNA 4933406N12   RGD1304752_predicted  similar to RIKEN cDNA 4933406N12 (predicted)  'predicted' is removed 2292626 APPROVED
2008-03-05 Sohlh2  spermatogenesis and oogenesis specific basic helix-loop-helix 2  LOC619575  hypothetical protein LOC619575  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-19 LOC619575  hypothetical protein LOC619575      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-01-20 RGD1304752_predicted  similar to RIKEN cDNA 4933406N12 (predicted)  LOC295054_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC295054_predicted  similar to RIKEN cDNA 4933406N12 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL