LOC679368 (similar to carboxylesterase 5) - Rat Genome Database

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Gene: LOC679368 (similar to carboxylesterase 5) Rattus norvegicus
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Symbol: LOC679368
Name: similar to carboxylesterase 5
RGD ID: 1589506
Description: Predicted to enable carboxylesterase activity.
Type: protein-coding
Previously known as: pyrethroid hydrolase Ces2e
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Celera1925,076 - 34,541 (-)NCBICelera
Cytogenetic Map19 NCBI



Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Markers in Region
D19Rat86  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81936,289 - 36,512 (+)Marker Load Pipeline
mRatBN7.21260,432,881 - 260,433,115 (+)MAPPERmRatBN7.2
Rnor_6.01282,722,597 - 282,722,827NCBIRnor6.0
Rnor_5.01290,055,940 - 290,056,170UniSTSRnor5.0
Celera1926,390 - 26,613UniSTS
SHRSP x BN Map191.11RGD
SHRSP x BN Map191.11UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001056053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_001056053   ⟹   XP_001056053
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1925,076 - 34,541 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_001056053 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000065593.2
RefSeq Acc Id: XP_001056053   ⟸   XM_001056053
- Sequence:
Protein Domains
Carboxylesterase type B

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000048823 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000073241.4 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  CarbesteraseB UniProtKB/TrEMBL
  Carboxylesterase_B_AS UniProtKB/TrEMBL
  Carboxylesterase_B_CS UniProtKB/TrEMBL
  Type-B_Carboxylest/Lipase UniProtKB/TrEMBL
NCBI Gene 679368 ENTREZGENE
PANTHER CARBOXYLESTERASE UniProtKB/TrEMBL
Pfam COesterase UniProtKB/TrEMBL
PhenoGen LOC679368 PhenoGen
PROSITE CARBOXYLESTERASE_B_1 UniProtKB/TrEMBL
  CARBOXYLESTERASE_B_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000048823 RatGTEx
Superfamily-SCOP alpha/beta-Hydrolases UniProtKB/TrEMBL
UniProt A0A8L2QWT9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-11-19 LOC679368  similar to carboxylesterase 5      Symbol and Name status set to provisional 70820 PROVISIONAL