Rpl31l1 (ribosomal protein L31-like 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Rpl31l1 (ribosomal protein L31-like 1) Rattus norvegicus
Analyze
Symbol: Rpl31l1
Name: ribosomal protein L31-like 1
RGD ID: 1588872
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L31-like; large ribosomal subunit protein eL31-like; LOC688416; ribosomal protein L31-like 10; Rpl31-l10; similar to ribosomal protein L31
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X96,550,215 - 96,590,730 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.2X92,301,089 - 92,302,388 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X99,522,731 - 99,528,361 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X99,331,184 - 99,369,940 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4X116,352,106 - 116,365,380 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
CeleraX93,402,627 - 93,443,225 (+)NCBICelera
Cytogenetic MapXq31NCBI
JBrowse:




References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in Rpl31l1
44 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X80434318125434318Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX92979612117740458Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX45182909117740458Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
sensory system
visual system
7 9 25 37 25 17 5 12 2 2

Sequence


RefSeq Acc Id: XM_063280558   ⟹   XP_063136628
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X96,550,215 - 96,590,730 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063136628 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_063136628   ⟸   XM_063280558


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-1724 BioCyc
NCBI Gene 688416 ENTREZGENE
PhenoGen Rpl31l1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-07 Rpl31l1  ribosomal protein L31-like 1  Rpl31-l10  ribosomal protein L31-like 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-10-02 Rpl31-l10  ribosomal protein L31-like 10  LOC688416  similar to ribosomal protein L31  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-01-09 LOC688416  similar to ribosomal protein L31  LOC683629  similar to ribosomal protein L31  Data merged from RGD:1584522 1643240 APPROVED
2006-11-19 LOC688416  similar to ribosomal protein L31      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC683629  similar to ribosomal protein L31      Symbol and Name status set to provisional 70820 PROVISIONAL