Pax1 (paired box 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Pax1 (paired box 1) Rattus norvegicus
Analyze
Symbol: Pax1
Name: paired box 1
RGD ID: 1588548
Description: Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including regulation of transcription by RNA polymerase II; sclerotome development; and skeletal system development. Predicted to act upstream of or within several processes, including alpha-beta T cell differentiation; parathyroid gland development; and thymus development. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in branchiootorenal syndrome. Orthologous to human PAX1 (paired box 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; copper atom.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: paired box gene 1; paired box gene 1 (mapped); Paired box homeotic gene 1; paired box protein Pax-1; Pax-1; Pax1_mapped
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83155,244,961 - 155,254,836 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3155,245,529 - 155,254,836 (+)EnsemblGRCr8
mRatBN7.23134,792,330 - 134,801,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3134,789,182 - 134,801,636 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3138,710,682 - 138,720,045 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03147,294,766 - 147,304,129 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03144,997,920 - 145,007,281 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03141,577,124 - 141,589,849 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3141,577,504 - 141,589,849 (+)Ensemblrn6Rnor6.0
Rnor_5.03147,995,989 - 148,008,334 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43136,006,504 - 136,018,849 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3133,651,867 - 133,663,861 (+)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. The molecular basis of the undulated/Pax-1 mutation. Chalepakis G, etal., Cell 1991 Sep 6;66(5):873-84.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. GOA pipeline RGD automated data pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7607069   PMID:7743923   PMID:10364424   PMID:11476574   PMID:11900462   PMID:12490554   PMID:15024065   PMID:16093716   PMID:34453169  


Genomics

Comparative Map Data
Pax1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83155,244,961 - 155,254,836 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl3155,245,529 - 155,254,836 (+)EnsemblGRCr8
mRatBN7.23134,792,330 - 134,801,637 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3134,789,182 - 134,801,636 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx3138,710,682 - 138,720,045 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03147,294,766 - 147,304,129 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03144,997,920 - 145,007,281 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.03141,577,124 - 141,589,849 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3141,577,504 - 141,589,849 (+)Ensemblrn6Rnor6.0
Rnor_5.03147,995,989 - 148,008,334 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.43136,006,504 - 136,018,849 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera3133,651,867 - 133,663,861 (+)NCBICelera
Cytogenetic Map3q41NCBI
PAX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382021,705,664 - 21,718,481 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2021,705,659 - 21,718,481 (+)Ensemblhg38GRCh38
GRCh372021,686,302 - 21,699,119 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362021,634,297 - 21,644,620 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342021,635,074 - 21,643,441NCBI
Celera2021,760,205 - 21,770,528 (+)NCBICelera
Cytogenetic Map20p11.22NCBI
HuRef2021,649,121 - 21,661,830 (+)NCBIHuRef
CHM1_12021,686,612 - 21,699,440 (+)NCBICHM1_1
T2T-CHM13v2.02021,762,357 - 21,775,174 (+)NCBIT2T-CHM13v2.0
Pax1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392147,203,850 - 147,216,972 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2147,203,845 - 147,235,215 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm382147,361,930 - 147,375,049 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2147,361,925 - 147,393,295 (+)Ensemblmm10GRCm38
MGSCv372147,190,730 - 147,200,785 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv362147,056,501 - 147,066,490 (+)NCBIMGSCv36mm8
Celera2148,637,978 - 148,647,942 (+)NCBICelera
Cytogenetic Map2G2NCBI
cM Map272.63NCBI
Pax1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541529,413,253 - 29,420,682 (+)Ensembl
ChiLan1.0NW_00495541529,413,253 - 29,420,682 (+)NCBIChiLan1.0ChiLan1.0
PAX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22122,594,415 - 22,607,324 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12022,591,251 - 22,604,160 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02021,663,155 - 21,676,880 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12021,623,771 - 21,633,468 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2021,623,771 - 21,632,608 (+)EnsemblpanPan2panpan1.1
PAX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1241,742,570 - 1,752,593 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl241,743,940 - 1,753,185 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha241,769,451 - 1,778,164 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0242,148,503 - 2,157,210 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl242,147,192 - 2,157,210 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1241,746,038 - 1,754,735 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0241,848,749 - 1,857,442 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0242,124,459 - 2,134,423 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pax1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640150,344,618 - 150,353,321 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366203,765,444 - 3,776,467 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366203,765,481 - 3,773,779 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1729,422,129 - 29,431,990 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11729,421,117 - 29,436,481 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21733,372,514 - 33,386,866 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PAX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1250,706,029 - 50,722,634 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660785,504,274 - 5,519,056 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pax1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474122,007,778 - 22,017,325 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462474122,009,733 - 22,017,377 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Pax1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v15126,946,314 - 126,955,181 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pax1
126 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:114
Count of miRNA genes:90
Interacting mature miRNAs:101
Transcripts:ENSRNOT00000067983
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2301411Bp320Blood pressure QTL 3200.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3141555229186555229Rat
12879876Bw182Body weight QTL 1820.003body mass (VT:0001259)body weight (CMO:0000012)3141555229186555229Rat
1582233Insul10Insulin level QTL 105.40.0015blood insulin amount (VT:0001560)serum insulin level times blood glucose level (CMO:0002040)3133259579178259579Rat
12879872Cm97Cardiac mass QTL 970.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3141555229186555229Rat
1578653Vnigr3Vascular neointimal growth QTL 33.1artery morphology trait (VT:0002191)artery neointimal hyperplastic lesion area (CMO:0001414)3151075912189428310Rat
12879873Cm96Cardiac mass QTL 960.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)3141555229186555229Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)3129154923182114333Rat
12879874Cm98Cardiac mass QTL 980.005heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)3141555229186555229Rat
12879875Kidm64Kidney mass QTL 640.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3141555229186555229Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)351581665184004958Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)367641776167835660Rat
1578754Stresp16Stress response QTL 1640.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)3133134628178134628Rat
1300173Rf11Renal function QTL 113.38renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)3141508991166376254Rat
9589106Insul23Insulin level QTL 2313.860.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)3152055202189428310Rat
8694437Bw167Body weight QTL 16722.460.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)3112250810157250810Rat
10755461Coatc16Coat color QTL 16coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)3142898802187898802Rat
8662816Vetf4Vascular elastic tissue fragility QTL 44renal artery integrity trait (VT:0010642)number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)379649560177741895Rat
1559282Emca5Estrogen-induced mammary cancer QTL 53.9mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)3145335553189428310Rat
1354611Despr2Despair related QTL 23.030.0028locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)3117537367162537367Rat
2303620Vencon4Ventilatory control QTL 43.9respiration trait (VT:0001943)tidal volume (CMO:0000222)3125116475170116475Rat
1358204Insglur1Insulin/glucose ratio QTL 13.8blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)3136091420155634702Rat
1576306Schws3Schwannoma susceptibility QTL 30.001nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)3139299381184299381Rat
1300159Kidm4Kidney mass QTL 43.83kidney mass (VT:0002707)right kidney wet weight to body weight ratio (CMO:0001953)3141508991177728348Rat
5686842Rf59Renal function QTL 59urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)3122395989167395989Rat
631673Iddm13Insulin dependent diabetes mellitus QTL 131.30.663blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)3137114333182114333Rat
2301971Cm71Cardiac mass QTL 714.63heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)3131036586176036586Rat
2301970Bw81Body weight QTL 815.19body mass (VT:0001259)body weight (CMO:0000012)3131036586176036586Rat
1581546Pur13Proteinuria QTL 132.930.0335urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)398651826167012663Rat
1578666Vnigr1Vascular neointimal growth QTL 14.6artery morphology trait (VT:0002191)artery lumen area (CMO:0001409)3151075912189428310Rat
1578656Vnigr2Vascular neointimal growth QTL 24.2artery morphology trait (VT:0002191)lesioned artery residual lumen area (CMO:0001417)3151075912189428310Rat
1331758Bp207Blood pressure QTL 2072.848arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)3110634702155634702Rat
12879871Am7Aortic mass QTL 70.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)3141555229186555229Rat
631541Bp81Blood pressure QTL 814arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3144575244189428310Rat
724532Cm17Cardiac mass QTL 172heart mass (VT:0007028)calculated heart weight (CMO:0000073)3116188400161188400Rat

Markers in Region
PMC21138P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23134,793,064 - 134,793,622 (+)MAPPERmRatBN7.2
Rnor_6.03141,581,278 - 141,581,835NCBIRnor6.0
Rnor_5.03147,999,763 - 148,000,320UniSTSRnor5.0
RGSC_v3.43136,010,278 - 136,010,835UniSTSRGSC3.4
Celera3133,655,290 - 133,655,847UniSTS
Cytogenetic Map3q41UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
1 3 13 25 23 25 6 50 6 6 105 78 10 7 18 39 19

Sequence


Ensembl Acc Id: ENSRNOT00000067983   ⟹   ENSRNOP00000062281
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl3155,245,529 - 155,254,836 (+)Ensembl
mRatBN7.2 Ensembl3134,789,291 - 134,801,636 (+)Ensembl
Rnor_6.0 Ensembl3141,577,504 - 141,589,849 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103021   ⟹   ENSRNOP00000096757
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl3134,789,182 - 134,801,636 (+)Ensembl
RefSeq Acc Id: NM_001401899   ⟹   NP_001388828
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83155,245,529 - 155,254,836 (+)NCBI
mRatBN7.23134,792,330 - 134,801,637 (+)NCBI
RefSeq Acc Id: XM_063283810   ⟹   XP_063139880
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr83155,244,961 - 155,254,830 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001388828 (Get FASTA)   NCBI Sequence Viewer  
  XP_063139880 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL95112 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000062281
  ENSRNOP00000062281.3
Ensembl Acc Id: ENSRNOP00000062281   ⟸   ENSRNOT00000067983
Ensembl Acc Id: ENSRNOP00000096757   ⟸   ENSRNOT00000103021
RefSeq Acc Id: NP_001388828   ⟸   NM_001401899
RefSeq Acc Id: XP_063139880   ⟸   XM_063283810
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GM82 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LT82-F1-model_v2 AlphaFold F1LT82 1-191 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1588548 AgrOrtholog
BioCyc Gene G2FUF-47544 BioCyc
Ensembl Genes ENSRNOG00000024882 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000067983 ENTREZGENE
  ENSRNOT00000067983.3 UniProtKB/TrEMBL
NCBI Gene 311505 ENTREZGENE
PhenoGen Pax1 PhenoGen
RatGTEx ENSRNOG00000024882 RatGTEx
UniProt A0A8I6GM82 ENTREZGENE
  A6K7A7_RAT UniProtKB/TrEMBL
  F1LT82_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-10-30 Pax1  paired box 1  Pax1  paired box gene 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2007-04-13   paired box gene 1  Pax1  paired box gene 1 (mapped)  Name updated 737654 APPROVED
2007-04-11 Pax1  paired box gene 1 (mapped)  Pax1_mapped  paired box gene 1 (mapped)  Data merged from RGD:3257 737654 APPROVED
2006-11-19 Pax1  paired box gene 1 (mapped)      Symbol and Name status set to provisional 70820 PROVISIONAL
2005-11-17 Pax1_mapped  paired box gene 1 (mapped)      Symbol and Name updated 1556543 APPROVED
2002-06-10 Pax1  Paired box homeotic gene 1      Symbol and Name status set to approved 70586 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_homology mouse homolog exhibits transcriptional activity; mutation causes undulating malformations in the vertebral column 1302229