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Gene: Lpin3 (lipin 3) Rattus norvegicus

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Symbol:

Lpin3

Name:

lipin 3

RGD ID:

1588534

Description:

Predicted to enable phosphatidate phosphatase activity and transcription coactivator activity. Predicted to be involved in several processes, including cellular response to insulin stimulus; positive regulation of transcription by RNA polymerase II; and triglyceride biosynthetic process. Predicted to be active in nucleus. Orthologous to human LPIN3 (lipin 3); INTERACTS WITH 6-propyl-2-thiouracil; amitrole; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC362261; MGC109016; phosphatidate phosphatase LPIN3; similar to lipin 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LPIN3 (lipin 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Lpin3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Lpin3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LPIN3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LPIN3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lpin3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LPIN3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LPIN3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Lpin3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Lpin3 (lipin 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Lpin3 (lipin 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	LPIN3 (lipin 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zgc:123305	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	zgc:123305	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	PAH1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Lpin	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	lpin-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	lpin-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	lpin3	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	lpin3	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	169,953,479 - 169,978,034 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	169,960,522 - 169,978,031 (+)	Ensembl				GRCr8
mRatBN7.2	3	149,533,719 - 149,558,494 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	149,534,051 - 149,558,327 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	153,358,261 - 153,371,255 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	161,857,652 - 161,870,646 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	159,597,498 - 159,610,482 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	156,874,805 - 156,899,601 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	156,886,454 - 156,899,436 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	163,102,102 - 163,126,692 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	151,689,960 - 151,702,944 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	148,217,925 - 148,230,909 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,3',5-triiodo-L-thyronine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime (ISO)

6-propyl-2-thiouracil (EXP)

amiodarone (ISO)

amitrole (EXP)

amphetamine (EXP)

aristolochic acid A (ISO)

arsenous acid (ISO)

atrazine (EXP)

azoxystrobin (EXP)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

caffeine (ISO)

camptothecin (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

choline (ISO)

cisplatin (ISO)

copper(II) chloride (ISO)

coumarin (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP)

doxorubicin (ISO)

endosulfan (EXP)

farnesol (ISO)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

glyphosate (EXP)

GW 4064 (ISO)

hydralazine (ISO)

imidacloprid (EXP)

indometacin (EXP)

L-methionine (ISO)

leflunomide (ISO)

methimazole (EXP)

niclosamide (ISO)

okadaic acid (ISO)

oleic acid (ISO)

paracetamol (EXP,ISO)

perfluorononanoic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

thiabendazole (EXP)

thioacetamide (EXP)

thiram (ISO)

triptonide (ISO)

trovafloxacin (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to insulin stimulus (IBA)

fatty acid catabolic process (IBA)

positive regulation of transcription by RNA polymerase II (IBA)

triglyceride biosynthetic process (IBA)

Cellular Component

cytosol (IEA,ISO)

nucleus (IBA)

Molecular Function

hydrolase activity (IEA)

phosphatidate phosphatase activity (IBA,IEA,ISO)

transcription coactivator activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:17158099	PMID:18694939	PMID:23505321

Genomics

Comparative Map Data

Lpin3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	169,953,479 - 169,978,034 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	169,960,522 - 169,978,031 (+)	Ensembl				GRCr8
mRatBN7.2	3	149,533,719 - 149,558,494 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	149,534,051 - 149,558,327 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	153,358,261 - 153,371,255 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	161,857,652 - 161,870,646 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	159,597,498 - 159,610,482 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	156,874,805 - 156,899,601 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	156,886,454 - 156,899,436 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	163,102,102 - 163,126,692 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	151,689,960 - 151,702,944 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	148,217,925 - 148,230,909 (+)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

LPIN3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	41,340,821 - 41,360,582 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	41,340,786 - 41,360,583 (+)	Ensembl			hg38	GRCh38
GRCh37	20	39,969,461 - 39,989,222 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	39,402,974 - 39,422,636 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	20	36,680,226 - 36,699,888 (+)	NCBI		Celera
Cytogenetic Map	20	q12	NCBI
HuRef	20	36,707,814 - 36,727,419 (+)	NCBI		HuRef
CHM1_1	20	39,873,839 - 39,893,508 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	20	43,072,623 - 43,092,380 (+)	NCBI		T2T-CHM13v2.0

Lpin3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	160,722,590 - 160,747,920 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	160,722,590 - 160,747,922 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	160,880,670 - 160,906,000 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	160,880,670 - 160,906,002 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	160,706,469 - 160,731,528 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	160,572,174 - 160,597,233 (+)	NCBI		MGSCv36	mm8
Celera	2	166,811,402 - 166,836,437 (+)	NCBI		Celera
Cytogenetic Map	2	H2	NCBI
cM Map	2	80.98	NCBI

Lpin3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	15,596,832 - 15,615,900 (-)	Ensembl
ChiLan1.0	NW_004955445	15,600,510 - 15,616,452 (-)	NCBI	ChiLan1.0	ChiLan1.0

LPIN3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	47,082,827 - 47,102,569 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	47,075,963 - 47,094,729 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	37,682,636 - 37,702,357 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	38,778,785 - 38,798,502 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	38,778,695 - 38,798,502 (+)	Ensembl			panPan2	panpan1.1

LPIN3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	29,343,658 - 29,360,472 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	29,347,627 - 29,399,854 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	28,988,938 - 29,005,758 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	30,048,503 - 30,065,326 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	30,048,549 - 30,065,326 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	29,317,348 - 29,334,163 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	29,420,824 - 29,437,634 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	29,917,336 - 29,934,167 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Lpin3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	178,301,812 - 178,318,993 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936561	431,866 - 443,307 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936561	430,491 - 443,307 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LPIN3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	43,989,333 - 44,006,262 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	17	43,993,710 - 44,006,188 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	49,433,516 - 49,450,557 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LPIN3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	22,412,858 - 22,432,563 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	22,410,294 - 22,424,587 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666050	71,231,337 - 71,250,938 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lpin3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	12,895,047 - 12,906,700 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624790	12,893,588 - 12,910,921 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Lpin3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	140,183,600 - 140,196,568 (+)	NCBI		Rrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	377
Count of miRNA genes:	223
Interacting mature miRNAs:	256
Transcripts:	ENSRNOT00000022403
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
12879876	Bw182	Body weight QTL 182		0.003	body mass (VT:0001259)	body weight (CMO:0000012)	3	141555229	186555229	Rat
2301411	Bp320	Blood pressure QTL 320		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	141555229	186555229	Rat
1582233	Insul10	Insulin level QTL 10	5.4	0.0015	blood insulin amount (VT:0001560)	serum insulin level times blood glucose level (CMO:0002040)	3	133259579	178259579	Rat
1300113	Bp176	Blood pressure QTL 176	3.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	166376089	177728348	Rat
12879872	Cm97	Cardiac mass QTL 97		0.001	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	141555229	186555229	Rat
12879873	Cm96	Cardiac mass QTL 96		0.001	heart mass (VT:0007028)	heart wet weight to body weight ratio (CMO:0002408)	3	141555229	186555229	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	151075912	189428310	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	129154923	182114333	Rat
12879874	Cm98	Cardiac mass QTL 98		0.005	heart right ventricle mass (VT:0007033)	heart right ventricle weight to body weight ratio (CMO:0000914)	3	141555229	186555229	Rat
12879875	Kidm64	Kidney mass QTL 64		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	141555229	186555229	Rat
1298068	Bp167	Blood pressure QTL 167		0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161492708	189428310	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
8552791	Vie2	Viral induced encephalitis QTL 2	4.1		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	3	166376089	189428310	Rat
61335	Bp20	Blood pressure QTL 20	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	161799493	176036425	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	133134628	178134628	Rat
1331726	Bp208	Blood pressure QTL 208	3.129		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	161799270	187311134	Rat
1582213	Insul6	Insulin level QTL 6	3.7	0.0009	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
1598854	Memor10	Memory QTL 10	2		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	3	166376089	189428310	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	152055202	189428310	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	142898802	187898802	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	145335553	189428310	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	125116475	170116475	Rat
1582256	Insul9	Insulin level QTL 9	4.4	0.0016	blood insulin amount (VT:0001560)	absolute change in serum insulin level (CMO:0002038)	3	155759447	189428310	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	139299381	184299381	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	141508991	177728348	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	131036586	176036586	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	137114333	182114333	Rat
1582248	Insul7	Insulin level QTL 7	3.9	0.0041	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	3	155759447	189428310	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	131036586	176036586	Rat
1578666	Vnigr1	Vascular neointimal growth QTL 1	4.6		artery morphology trait (VT:0002191)	artery lumen area (CMO:0001409)	3	151075912	189428310	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	151075912	189428310	Rat
12879871	Am7	Aortic mass QTL 7		0.001	aorta mass (VT:0002845)	aorta weight to aorta length to body weight ratio (CMO:0002722)	3	141555229	186555229	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	144575244	189428310	Rat

Markers in Region

RH134062

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	149,557,944 - 149,558,163 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	156,899,052 - 156,899,270	NCBI	Rnor6.0
Rnor_5.0	3	163,126,143 - 163,126,361	UniSTS	Rnor5.0
RGSC_v3.4	3	151,702,558 - 151,702,776	UniSTS	RGSC3.4
Celera	3	148,230,523 - 148,230,741	UniSTS
RH 3.4 Map	3	1369.1	UniSTS
Cytogenetic Map	3	q42	UniSTS

MARC_23321-23322:1024689677:5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	149,556,395 - 149,556,907 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	156,897,503 - 156,898,014	NCBI	Rnor6.0
Rnor_5.0	3	163,124,594 - 163,125,105	UniSTS	Rnor5.0
RGSC_v3.4	3	151,701,009 - 151,701,520	UniSTS	RGSC3.4
Celera	3	148,228,974 - 148,229,485	UniSTS
Cytogenetic Map	3	q42	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	92	59	6	356	192	11	138	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001014184	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434377	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_197777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591931	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591932	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105519	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284192	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284193	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284195	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284196	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063284198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010064668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC128986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022403 ⟹ ENSRNOP00000022403

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	169,960,522 - 169,978,031 (+)	Ensembl
mRatBN7.2 Ensembl	3	149,534,051 - 149,558,327 (+)	Ensembl
Rnor_6.0 Ensembl	3	156,886,454 - 156,899,436 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000095845 ⟹ ENSRNOP00000096250

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	169,960,522 - 169,978,031 (+)	Ensembl
mRatBN7.2 Ensembl	3	149,534,051 - 149,558,327 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000111332 ⟹ ENSRNOP00000081644

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	169,960,522 - 169,978,031 (+)	Ensembl
mRatBN7.2 Ensembl	3	149,534,051 - 149,558,327 (+)	Ensembl

RefSeq Acc Id:

NM_001014184 ⟹ NP_001014206

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,965,050 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,545,347 - 149,558,331 (+)	NCBI
Rnor_6.0	3	156,886,454 - 156,899,438 (+)	NCBI
Rnor_5.0	3	163,102,102 - 163,126,692 (+)	NCBI
RGSC_v3.4	3	151,689,960 - 151,702,944 (+)	RGD
Celera	3	148,217,925 - 148,230,909 (+)	RGD

Sequence:

show sequence

CCAGGGTTGGCCAGCAGCAGCCATGAACTATGTGGGGCAGCTGGCAGAGACAGTGTTTGGAACA
GTTAAGGAGCTATACAGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGG
TCAAGCAGGTGGATGGCTCCTTCCGATGCTCACCCTTCCATGTGCGGTTCGGCAAGCTGGGTGT
CCTGCGGTCACGGGAGAAGGTGGTGGACATCGAGATCAATGGAGAGCCTGTGGACTTGCACATG
AAGTTGGGGGACAGTGGCGAGGCCTTCTTTGTCCAGGAGCTGGACAGTGATGAGGAAGATGTGC
CTCCTCGACTGTGCACCTCACCCATCCCGTGGGGAGGCCTGTCAGGCTTTCCCTCAGACTCCCA
GCTGGGCACAGCGAGCGAGCCTGAGGGCCTCGTCCTTACGGGGCGGAGAAAGAGGCGGCGCAGG
AGGAAACCCAGGCGCAGGGAGGATGCGGCGGACTCCAGTTCTGAAGAGCTGGAGGCAGGTGCCG
AGAGTGAGCTGACCTTGCTGGAAAAGCCAATGCCAGAGTCCCCAAGTGCTTGGAAGGAAGAGGA
GCCCTCATCGCAGCCTAAAGACATCTACCCCTACTCTGATGGCGAGTGTACGCCCCAGGCCAAC
CTTTCATCTGCTGACCTAATGTCCCCTAAGAGTGACTCAGAACTAGAGCTGCGGCCCTTGGAGC
CCAGTCCTCTGAGGGCTGAGTCTCATATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCGAA
AGCTGAGCATCCTGAGTTCTCGTTGGTCCTTGAAAGTATGGCTGAGGCAATCTGTGCTCTTCCT
GGGGAACCTAGCCCTTCCTCTATGGCTGGCGTGGACACTTTGAGATCCCCAGCGCTGCAACCAG
GAGTCAGGGAAGATATGTTTCATCCTGATGTGGAGGCATATCGTGAGGAAACTCCCATGGATTC
TCCTCTTGCTGCCCCAGAGAGTAAGGAAACCAAGACTCAGAACCCCAGGGGTACAGGACACCCT
CCTGCCACGAAATCATGGAGCTGGACCACTCCAGAGAGCCACACGCCCTCTGGACGTACAGAAG
TCTCCAGAGGAAGAGCTTCCCTGAAGAGAAGCCAGCACCTGGGCCCAAGTGATATCTACCTGGA
TGATCTGCCCTCCCTGGACTCTGAGAATGTGGCCCTCTATTTCCCTAAGAGTGACTGTGGGATG
GGGGCCAGGAGGTGGAGCGAGCCCAGCAACCAGAAGCTGCTGGAGAACCCCAGCCGTGAGCACA
CAGCAGAGTGCACTCTGGACTCCGTGGACAGAATAGAATTGTCCCTCTGTGGTGGACTGGCCGA
CACTCGCGATATCTCCCTGGAGAAGTTCACCCAGCACATGGTCTCCTACGAGGACCTCACTAAG
AACCCCGGGCTCCTGGATGACCCAAACCTCGTGGTGAAAATTAACGAGAAGCATTATAACTGGG
CTGTGGCTGCCCCCATGATTCTTTCTCTGCAAGCCTTCCAGAAGAACTTACCTGAGAGCACTGT
GGACAAGCTTCAAAAGGAGAAGATGCCCCGGAAAGGTGGGCGATGGTGGTTTTCCTGGAGACGC
AGGGACTTCCCAGCTGAGGAGCGCAGTGCCCAGAGGGAGAAAGCAGCAACCAGGAAACAGCAGG
GAGAGAAGACAGAGGTCCTAAGCAGTGATGACGATGTCCCAGATAGCCCTGTGATCCTCGAAGT
GCCCCCACTGCCATCCTCCACTCCGGGCTATGTCCCTACCTACAAGAAGTCTCTTCGTCTCTCT
TCCAATCAGATCCGGTGTCTAAACCTGAATGAAGGAGCTAACGATGTGGTCTTCAGCGTGACTA
CCCAGTACCAAGGCACCTGCCGTTGCAAAGCCACCATCTACCTGTGGAACTGGGATGACAAGGT
GGTCATCTCTGACATAGACGGCACCATCACCAAGTCGGATGCTCTGGGCCACATTCTGCCCCAG
CTGGGGAAAGACTGGACACACCAGGGCATTACTAGTCTCTACCACAAAATCCATCTAAATGGGT
ACAAGTTCCTGTACTGCTCTGCACGGGCTATCGGCATGGCTCACCTCACCAAGGGGTACCTGCA
GTGGGTGAGCGAGCACGGCTGCGGCCTCCCTAAGGGCCCCATCCTGCTGTCTCCCAGCAGCCTC
TTCTCCGCCCTCCACAGGGAAGTAATCGAGAAGAAGCCAGAGGTGTTCAAGGTTGCCTGCCTGA
GTGATATCCAGCAGCTGTTTCTGCCCCAAAGACAGCCTTTCTATGCCGCGTTTGGGAACAGGCC
TAACGATGTTTTTGCCTACAGGCAGGTGGGCCTCCCTGAGTCTCGAATCTTCACAGTCAACCCC
CGGGGAGAGCTCATCCAAGAGCTCATAAAGAACCACAAATCCACGTACCAGCGGCTTGGAGAGG
TGGTGGAGCTTCTCTTCCCGCCCGTGGTGCGCGGCCCCAGCACAGACCTGGCCAACCCTGAATA
CAGCAACCTCTGCTATTGGCGGAAGCCACTGCCGTGTGTGGACTTTGACACCCTGGTTTGAGCT
TGCCCTGACGGTTCTCCTTGGCCTGACCCAGGACTGATGGAGTACTTAGGACAGTAGGGGTCAG
AAGATGCGTGCCGTGGGCCAATCCAACAAAGGGCTGCAAGTTGACTGGCAGCCTCCGCTACCGC
CACCTTGAAACACAAATGGCCGTGTTCGTCAGTTTGACCGCTCGGTACCAGGGCACTGGGTTTG
AAGAACTGGAACAAGATGGCATCTGACAGAGATGGCACCGAATGAGGCCCAGGTGGCTGTGGGA
GCATGGGGAGTACTCAGGGACCCACCTCTCTATCAGGAGTCAGGTAGCTGTCCCAGGCCTCAGT
ACAGCCCTGACCTCCAGCTATTAAACGTGTCACTAGACTCTTGCAGGGTTCTCTGGCTCCTAGG
CCATTGGTTCTCAATCTGTGGGTCGCAACCCCTTCGGAGGTCGAATGACCCTTTCATGGGGGTT
TCATATCAGATATCCTGTTTATCAGATATTTACATTATGATTCAAAACTATAGTTATGAAGTAG
CAGTGAAAATAATTGTATTTACAACCATGAGGAACAGTATTAAAAAGTCACAGCATTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006235487 ⟹ XP_006235549

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,958,330 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,540,638 - 149,558,334 (+)	NCBI
Rnor_6.0	3	156,881,729 - 156,899,601 (+)	NCBI
Rnor_5.0	3	163,102,102 - 163,126,692 (+)	NCBI

Sequence:

show sequence

GGGTGTGGTTGGGAACGGGTCAGAGCCCCTAAGTCTGGTGCTCCCCAGTCTCCATAGGAAAAAA
GGAGCCCTTGAGTGTGAACACGGGACGGGGGCGGGGTCTTTTCGAAGTAAGGGGTGGAGCCTGA
ACTGACGGTGACAGTGAAAGCCGCACCTGGTTGGTGGAAGGAGTGGAGCCCGGATCTCCCGGGT
CCCAGAGGAAGCGGAAGTGCTGGGATCTGGACACTCACCTGTGGAACCTCTGCATACAGGGTTC
CGGACGTGAGTCACACAGACCTGGACTTGAACCTCAGGTTCCTTCTTTCATAGGCGTGAGACCT
TGGGCAAGTCACTCCACCTCCCCAAGCTTCACCTGGTTCGTCTGTAAACAGGAATAATAGCAGC
AGCTCTGGCAGCCTTTCGAGGTTGTCCTGAGGATTGGATGAGCCATGCCCATGGAGGGCTCATG
GGCGTCACAATGTGGAGATTGGCGGTAGGAGAAGTCAGCCGGCTGCCCAAGGGTCCCACTGTAG
GTTTGTGGGCCAGCCACAGCTAGTAGGCCCAGGTCTTCTGGAGATCCTCCCATCCCGCGGCTGC
TGCCTCTCTTTAAGCACGTTCCCTTTCTGAGGGCTGGACAACGTAAGCTTGGACATCCCAGGGT
TGGCCAGCAGCAGCCATGAACTATGTGGGGCAGCTGGCAGAGACAGTGTTTGGAACAGTTAAGG
AGCTATACAGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGGTCAAGCA
GGTGGATGGCTCCTTCCGATGCTCACCCTTCCATGTGCGGTTCGGCAAGCTGGGTGTCCTGCGG
TCACGGGAGAAGGTGGTGGACATCGAGATCAATGGAGAGCCTGTGGACTTGCACATGAAGTTGG
GGGACAGTGGCGAGGCCTTCTTTGTCCAGGAGCTGGACAGTGATGAGGAAGATGTGCCTCCTCG
ACTGTGCACCTCACCCATCCCGTGGGGAGGCCTGTCAGGCTTTCCCTCAGACTCCCAGCTGGGC
ACAGCGAGCGAGCCTGAGGGCCTCGTCCTTACGGGGCGGAGAAAGAGGCGGCGCAGGAGGAAAC
CCAGGCGCAGGGAGGATGCGGCGGACTCCAGTTCTGAAGAGCTGGAGGCAGGTGCCGAGAGTGA
GCTGACCTTGCTGGAAAAGCCAATGCCAGAGTCCCCAAGTGCTTGGAAGGAAGAGGAGCCCTCA
TCGCAGCCTAAAGACATCTACCCCTACTCTGATGGCGAGTGTACGCCCCAGGCCAACCTTTCAT
CTGCTGACCTAATGTCCCCTAAGAGTGACTCAGAACTAGAGCTGCGGCCCTTGGAGCCCAGTCC
TCTGAGGGCTGAGTCTCATATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCGAAAGCTGAG
CATCCTGAGTTCTCGTTGGTCCTTGAAAGTATGGCTGAGGCAATCTGTGCTCTTCCTGGGGAAC
CTAGCCCTTCCTCTATGGCTGGCGTGGACACTTTGAGATCCCCAGCGCTGCAACCAGGAGTCAG
GGAAGATATGTTTCATCCTGATGTGGAGGCATATCGTGAGGAAACTCCCATGGATTCTCCTCTT
GCTGCCCCAGAGAGTAAGGAAACCAAGACTCAGAACCCCAGGGGTACAGGACACCCTCCTGCCA
CGAAATCATGGAGCTGGACCACTCCAGAGAGCCACACGCCCTCTGGACGTACAGAAGTCTCCAG
AGGAAGAGCTTCCCTGAAGAGAAGCCAGCACCTGGGCCCAAGTGATATCTACCTGGATGATCTG
CCCTCCCTGGACTCTGAGAATGTGGCCCTCTATTTCCCTAAGAGTGACTGTGGGATGGGGGCCA
GGAGGTGGAGCGAGCCCAGCAACCAGAAGCTGCTGGAGAACCCCAGCCGTGAGCACACAGCAGA
GTGCACTCTGGACTCCGTGGACAGAATAGAATTGTCCCTCTGTGGTGGACTGGCCGACACTCGC
GATATCTCCCTGGAGAAGTTCACCCAGCACATGGTCTCCTACGAGGACCTCACTAAGAACCCCG
GGCTCCTGGATGACCCAAACCTCGTGGTGAAAATTAACGAGAAGCATTATAACTGGGCTGTGGC
TGCCCCCATGATTCTTTCTCTGCAAGCCTTCCAGAAGAACTTACCTGAGAGCACTGTGGACAAG
CTTCAAAAGGAGAAGATGCCCCGGAAAGGTGGGCGATGGTGGTTTTCCTGGAGACGCAGGGACT
TCCCAGCTGAGGAGCGCAGTGCCCAGAGGGAGAAAGCAGCAACCAGGAAACAGCAGGGAGAGAA
GACAGAGGTCCTAAGCAGTGATGACGATGTCCCAGATAGCCCTGTGATCCTCGAAGTGCCCCCA
CTGCCATCCTCCACTCCGGGCTATGTCCCTACCTACAAGAAGTCTCTTCGTCTCTCTTCCAATC
AGATCCGGTGTCTAAACCTGAATGAAGGAGCTAACGATGTGGTCTTCAGCGTGACTACCCAGTA
CCAAGGCACCTGCCGTTGCAAAGCCACCATCTACCTGTGGAACTGGGATGACAAGGTGGTCATC
TCTGACATAGACGGCACCATCACCAAGTCGGATGCTCTGGGCCACATTCTGCCCCAGCTGGGGA
AAGACTGGACACACCAGGGCATTACTAGTCTCTACCACAAAATCCATCTAAATGGGTACAAGTT
CCTGTACTGCTCTGCACGGGCTATCGGCATGGCTCACCTCACCAAGGGGTACCTGCAGTGGGTG
AGCGAGCACGGCTGCGGCCTCCCTAAGGGCCCCATCCTGCTGTCTCCCAGCAGCCTCTTCTCCG
CCCTCCACAGGGAAGTAATCGAGAAGAAGCCAGAGGTGTTCAAGGTTGCCTGCCTGAGTGATAT
CCAGCAGCTGTTTCTGCCCCAAAGACAGCCTTTCTATGCCGCGTTTGGGAACAGGCCTAACGAT
GTTTTTGCCTACAGGCAGGTGGGCCTCCCTGAGTCTCGAATCTTCACAGTCAACCCCCGGGGAG
AGCTCATCCAAGAGCTCATAAAGAACCACAAATCCACGTACCAGCGGCTTGGAGAGGTGGTGGA
GCTTCTCTTCCCGCCCGTGGTGCGCGGCCCCAGCACAGACCTGGCCAACCCTGAATACAGCAAC
CTCTGCTATTGGCGGAAGCCACTGCCGTGTGTGGACTTTGACACCCTGGTTTGAGCTTGCCCTG
ACGGTTCTCCTTGGCCTGACCCAGGACTGATGGAGTACTTAGGACAGTAGGGGTCAGAAGATGC
GTGCCGTGGGCCAATCCAACAAAGGGCTGCAAGTTGACTGGCAGCCTCCGCTACCGCCACCTTG
AAACACAAATGGCCGTGTTCGTCAGTTTGACCGCTCGGTACCAGGGCACTGGGTTTGAAGAACT
GGAACAAGATGGCATCTGACAGAGATGGCACCGAATGAGGCCCAGGTGGCTGTGGGAGCATGGG
GAGTACTCAGGGACCCACCTCTCTATCAGGAGTCAGGTAGCTGTCCCAGGCCTCAGTACAGCCC
TGACCTCCAGCTATTAAACGTGTCACTAGACTCTTGCAGGGTTCTCTGGCTCCTAGGCCATTGG
TTCTCAATCTGTGGGTCGCAACCCCTTCGGAGGTCGAATGACCCTTTCATGGGGGTTTCATATC
AGATATCCTGTTTATCAGATATTTACATTATGATTCAAAACTATAGTTATGAAGTAGCAGTGAA
AATAATTGTATTTACAACCATGAGGAACAGTATTAAAAAGTCACAGCATTAAGAAGGTTGAGAA
CCACTGTCCTTGGGGTATCATCTGGGAATACTACGATCCCACGGGTTTTGGGAGCCCAGACTAC
CCTCCTTAGCCAAGTGTCTCTGTGATCCCGTCTCTCTGCTCATAGGTCTTGATCTAAATATCTA
AGATCAGTTCATCTACCTTGAAA

hide sequence

RefSeq Acc Id:

XM_006235493 ⟹ XP_006235555

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,555 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,533,726 - 149,558,334 (+)	NCBI
Rnor_6.0	3	156,874,805 - 156,899,601 (+)	NCBI
Rnor_5.0	3	163,102,102 - 163,126,692 (+)	NCBI

Sequence:

show sequence

TCTAAATTATATTTCTGGGGAAGGGTGTGAGTTAGAGATGGGAGTTCTTTGTTCTGTCTTTCCT
GGGCACAAAGGTTCCACCTCCATGAAAGAAAGCGCTGGTTCTTGGTACTTGGACCAGTGTCCTA
AACAGTAAGGAATGCAATGACTCAGCTAGTCACTCAGGGACACTTTGGTGAACAAGGCCACGGG
AAGGAAATCATTACAGACAGCTGGACTGTAAAAAGCAAAAATACTCCACACACCAAACTCTACA
AGCCAGTAGAAGCTGAGCGGCCCATGATTCAACAGGCCTGTTTTTGCCACGTGGCTCCCAGCTC
ATGGTACGTGGCACATAGCCCTGGCTTGCCGCTGGCTGCTCCAAGCACTGCTGGAAAACAGAAC
TGGACCTCGGGAAAGCTATGTGGAGATTGGCGGTAGGAGAAGTCAGCCGGCTGCCCAAGGGTCC
CACTGTAGGTTTGTGGGCCAGCCACAGCTAGTAGGCCCAGGTCTTCTGGAGATCCTCCCATCCC
GCGGCTGCTGCCTCTCTTTAAGCACGTTCCCTTTCTGAGGGCTGGACAACGTAAGCTTGGACAT
CCCAGGGTTGGCCAGCAGCAGCCATGAACTATGTGGGGCAGCTGGCAGAGACAGTGTTTGGAAC
AGTTAAGGAGCTATACAGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTG
GTCAAGCAGGTGGATGGCTCCTTCCGATGCTCACCCTTCCATGTGCGGTTCGGCAAGCTGGGTG
TCCTGCGGTCACGGGAGAAGGTGGTGGACATCGAGATCAATGGAGAGCCTGTGGACTTGCACAT
GAAGTTGGGGGACAGTGGCGAGGCCTTCTTTGTCCAGGAGCTGGACAGTGATGAGGAAGATGTG
CCTCCTCGACTGTGCACCTCACCCATCCCGTGGGGAGGCCTGTCAGGCTTTCCCTCAGACTCCC
AGCTGGGCACAGCGAGCGAGCCTGAGGGCCTCGTCCTTACGGGGCGGAGAAAGAGGCGGCGCAG
GAGGAAACCCAGGCGCAGGGAGGATGCGGCGGACTCCAGTTCTGAAGAGCTGGAGGCAGGTGCC
GAGAGTGAGCTGACCTTGCTGGAAAAGCCAATGCCAGAGTCCCCAAGTGCTTGGAAGGAAGAGG
AGCCCTCATCGCAGCCTAAAGACATCTACCCCTACTCTGATGGCGAGTGTACGCCCCAGGCCAA
CCTTTCATCTGCTGACCTAATGTCCCCTAAGAGTGACTCAGAACTAGAGCTGCGGCCCTTGGAG
CCCAGTCCTCTGAGGGCTGAGTCTCATATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCGA
AAGCTGAGCATCCTGAGTTCTCGTTGGTCCTTGAAAGTATGGCTGAGGCAATCTGTGCTCTTCC
TGGGGAACCTAGCCCTTCCTCTATGGCTGGCGTGGACACTTTGAGATCCCCAGCGCTGCAACCA
GGAGTCAGGGAAGATATGTTTCATCCTGATGTGGAGGCATATCGTGAGGAAACTCCCATGGATT
CTCCTCTTGCTGCCCCAGAGAGTAAGGAAACCAAGACTCAGAACCCCAGGGGTACAGGACACCC
TCCTGCCACGAAATCATGGAGCTGGACCACTCCAGAGAGCCACACGCCCTCTGGACGTACAGAA
GTCTCCAGAGGAAGAGCTTCCCTGAAGAGAAGCCAGCACCTGGGCCCAAGTGATATCTACCTGG
ATGATCTGCCCTCCCTGGACTCTGAGAATGTGGCCCTCTATTTCCCTAAGAGTGACTGTGGGAT
GGGGGCCAGGAGGTGGAGCGAGCCCAGCAACCAGAAGCTGCTGGAGAACCCCAGCCGTGAGCAC
ACAGCAGAGTGCACTCTGGACTCCGTGGACAGAATAGAATTGTCCCTCTGTGGTGGACTGGCCG
ACACTCGCGATATCTCCCTGGAGAAGTTCACCCAGCACATGGTCTCCTACGAGGACCTCACTAA
GAACCCCGGGCTCCTGGATGACCCAAACCTCGTGGTGAAAATTAACGAGAAGCATTATAACTGG
GCTGTGGCTGCCCCCATGATTCTTTCTCTGCAAGCCTTCCAGAAGAACTTACCTGAGAGCACTG
TGGACAAGCTTCAAAAGGAGAAGATGCCCCGGAAAGGTGGGCGATGGTGGTTTTCCTGGAGACG
CAGGGACTTCCCAGCTGAGGAGCGCAGTGCCCAGAGGGAGAAAGCAGCAACCAGGAAACAGCAG
GGAGAGAAGACAGAGGTCCTAAGCAGTGATGACGATGTCCCAGATAGCCCTGTGATCCTCGAAG
TGCCCCCACTGCCATCCTCCACTCCGGGCTATGTCCCTACCTACAAGAAGTCTCTTCGTCTCTC
TTCCAATCAGATCCGGTGTCTAAACCTGAATGAAGGAGCTAACGATGTGGTCTTCAGCGTGACT
ACCCAGTACCAAGGCACCTGCCGTTGCAAAGCCACCATCTACCTGTGGAACTGGGATGACAAGG
TGGTCATCTCTGACATAGACGGCACCATCACCAAGTCGGATGCTCTGGGCCACATTCTGCCCCA
GCTGGGGAAAGACTGGACACACCAGGGCATTACTAGTCTCTACCACAAAATCCATCTAAATGGG
TACAAGTTCCTGTACTGCTCTGCACGGGCTATCGGCATGGCTCACCTCACCAAGGGGTACCTGC
AGTGGGTGAGCGAGCACGGCTGCGGCCTCCCTAAGGGCCCCATCCTGCTGTCTCCCAGCAGCCT
CTTCTCCGCCCTCCACAGGGAAGTAATCGAGAAGAAGCCAGAGGTGTTCAAGGTTGCCTGCCTG
AGTGATATCCAGCAGCTGTTTCTGCCCCAAAGACAGCCTTTCTATGCCGCGTTTGGGAACAGGC
CTAACGATGTTTTTGCCTACAGGCAGGTGGGCCTCCCTGAGTCTCGAATCTTCACAGTCAACCC
CCGGGGAGAGCTCATCCAAGAGCTCATAAAGAACCACAAATCCACGTACCAGCGGCTTGGAGAG
GTGGTGGAGCTTCTCTTCCCGCCCGTGGTGCGCGGCCCCAGCACAGACCTGGCCAACCCTGAAT
ACAGCAACCTCTGCTATTGGCGGAAGCCACTGCCGTGTGTGGACTTTGACACCCTGGTTTGAGC
TTGCCCTGACGGTTCTCCTTGGCCTGACCCAGGACTGATGGAGTACTTAGGACAGTAGGGGTCA
GAAGATGCGTGCCGTGGGCCAATCCAACAAAGGGCTGCAAGTTGACTGGCAGCCTCCGCTACCG
CCACCTTGAAACACAAATGGCCGTGTTCGTCAGTTTGACCGCTCGGTACCAGGGCACTGGGTTT
GAAGAACTGGAACAAGATGGCATCTGACAGAGATGGCACCGAATGAGGCCCAGGTGGCTGTGGG
AGCATGGGGAGTACTCAGGGACCCACCTCTCTATCAGGAGTCAGGTAGCTGTCCCAGGCCTCAG
TACAGCCCTGACCTCCAGCTATTAAACGTGTCACTAGACTCTTGCAGGGTTCTCTGGCTCCTAG
GCCATTGGTTCTCAATCTGTGGGTCGCAACCCCTTCGGAGGTCGAATGACCCTTTCATGGGGGT
TTCATATCAGATATCCTGTTTATCAGATATTTACATTATGATTCAAAACTATAGTTATGAAGTA
GCAGTGAAAATAATTGTATTTACAACCATGAGGAACAGTATTAAAAAGTCACAGCATTAAGAAG
GTTGAGAACCACTGTCCTTGGGGTATCATCTGGGAATACTACGATCCCACGGGTTTTGGGAGCC
CAGACTACCCTCCTTAGCCAAGTGTCTCTGTGATCCCGTCTCTCTGCTCATAGGTCTTGATCTA
AATATCTAAGATCAGTTCATCTACCTTGAAA

hide sequence

RefSeq Acc Id:

XM_039105514 ⟹ XP_038961442

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,958,326 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,540,630 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_039105515 ⟹ XP_038961443

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,548 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,533,719 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_039105516 ⟹ XP_038961444

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,958,326 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,540,630 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_039105517 ⟹ XP_038961445

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,957,153 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,537,457 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_039105519 ⟹ XP_038961447

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,548 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,533,719 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_039105521 ⟹ XP_038961449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,548 - 169,978,034 (+)	NCBI
mRatBN7.2	3	149,533,719 - 149,558,494 (+)	NCBI

RefSeq Acc Id:

XM_063284190 ⟹ XP_063140260

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,548 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284192 ⟹ XP_063140262

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,957,153 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284193 ⟹ XP_063140263

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,555 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284194 ⟹ XP_063140264

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,958,330 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284195 ⟹ XP_063140265

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,957,153 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284196 ⟹ XP_063140266

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,957,153 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284197 ⟹ XP_063140267

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,555 - 169,978,034 (+)	NCBI

RefSeq Acc Id:

XM_063284198 ⟹ XP_063140268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,958,316 - 169,972,903 (+)	NCBI

RefSeq Acc Id:

XR_010064666

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,524 - 169,976,686 (+)	NCBI

RefSeq Acc Id:

XR_010064667

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,517 - 169,976,133 (+)	NCBI

RefSeq Acc Id:

XR_010064668

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	169,953,479 - 169,975,876 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001014206	(Get FASTA)	NCBI Sequence Viewer
	NP_001421305	(Get FASTA)	NCBI Sequence Viewer
	NP_001421306	(Get FASTA)	NCBI Sequence Viewer
	NP_001421307	(Get FASTA)	NCBI Sequence Viewer
	NP_001421308	(Get FASTA)	NCBI Sequence Viewer
	XP_006235549	(Get FASTA)	NCBI Sequence Viewer
	XP_006235555	(Get FASTA)	NCBI Sequence Viewer
	XP_038961442	(Get FASTA)	NCBI Sequence Viewer
	XP_038961443	(Get FASTA)	NCBI Sequence Viewer
	XP_038961444	(Get FASTA)	NCBI Sequence Viewer
	XP_038961445	(Get FASTA)	NCBI Sequence Viewer
	XP_038961447	(Get FASTA)	NCBI Sequence Viewer
	XP_038961449	(Get FASTA)	NCBI Sequence Viewer
	XP_063140260	(Get FASTA)	NCBI Sequence Viewer
	XP_063140262	(Get FASTA)	NCBI Sequence Viewer
	XP_063140263	(Get FASTA)	NCBI Sequence Viewer
	XP_063140264	(Get FASTA)	NCBI Sequence Viewer
	XP_063140265	(Get FASTA)	NCBI Sequence Viewer
	XP_063140266	(Get FASTA)	NCBI Sequence Viewer
	XP_063140267	(Get FASTA)	NCBI Sequence Viewer
	XP_063140268	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH89878	(Get FASTA)	NCBI Sequence Viewer
	EDL96610	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022403.6
	ENSRNOP00000081644.1
	ENSRNOP00000096250
	ENSRNOP00000096250.1

RefSeq Acc Id:

NP_001014206 ⟸ NM_001014184

- UniProtKB:

Q5EBA5 (UniProtKB/TrEMBL), F1LMI0 (UniProtKB/TrEMBL), A0A8J8YGA4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRSREKV
VDIEINGEPVDLHMKLGDSGEAFFVQELDSDEEDVPPRLCTSPIPWGGLSGFPSDSQLGTASEP
EGLVLTGRRKRRRRRKPRRREDAADSSSEELEAGAESELTLLEKPMPESPSAWKEEEPSSQPKD
IYPYSDGECTPQANLSSADLMSPKSDSELELRPLEPSPLRAESHMQWAWGRLPKVAKAEHPEFS
LVLESMAEAICALPGEPSPSSMAGVDTLRSPALQPGVREDMFHPDVEAYREETPMDSPLAAPES
KETKTQNPRGTGHPPATKSWSWTTPESHTPSGRTEVSRGRASLKRSQHLGPSDIYLDDLPSLDS
ENVALYFPKSDCGMGARRWSEPSNQKLLENPSREHTAECTLDSVDRIELSLCGGLADTRDISLE
KFTQHMVSYEDLTKNPGLLDDPNLVVKINEKHYNWAVAAPMILSLQAFQKNLPESTVDKLQKEK
MPRKGGRWWFSWRRRDFPAEERSAQREKAATRKQQGEKTEVLSSDDDVPDSPVILEVPPLPSST
PGYVPTYKKSLRLSSNQIRCLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISDIDG
TITKSDALGHILPQLGKDWTHQGITSLYHKIHLNGYKFLYCSARAIGMAHLTKGYLQWVSEHGC
GLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFYAAFGNRPNDVFAYR
QVGLPESRIFTVNPRGELIQELIKNHKSTYQRLGEVVELLFPPVVRGPSTDLANPEYSNLCYWR
KPLPCVDFDTLV

hide sequence

RefSeq Acc Id:

XP_006235555 ⟸ XM_006235493

- Peptide Label:

isoform X2

- Sequence:

show sequence

MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRSREKV
VDIEINGEPVDLHMKLGDSGEAFFVQELDSDEEDVPPRLCTSPIPWGGLSGFPSDSQLGTASEP
EGLVLTGRRKRRRRRKPRRREDAADSSSEELEAGAESELTLLEKPMPESPSAWKEEEPSSQPKD
IYPYSDGECTPQANLSSADLMSPKSDSELELRPLEPSPLRAESHMQWAWGRLPKVAKAEHPEFS
LVLESMAEAICALPGEPSPSSMAGVDTLRSPALQPGVREDMFHPDVEAYREETPMDSPLAAPES
KETKTQNPRGTGHPPATKSWSWTTPESHTPSGRTEVSRGRASLKRSQHLGPSDIYLDDLPSLDS
ENVALYFPKSDCGMGARRWSEPSNQKLLENPSREHTAECTLDSVDRIELSLCGGLADTRDISLE
KFTQHMVSYEDLTKNPGLLDDPNLVVKINEKHYNWAVAAPMILSLQAFQKNLPESTVDKLQKEK
MPRKGGRWWFSWRRRDFPAEERSAQREKAATRKQQGEKTEVLSSDDDVPDSPVILEVPPLPSST
PGYVPTYKKSLRLSSNQIRCLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISDIDG
TITKSDALGHILPQLGKDWTHQGITSLYHKIHLNGYKFLYCSARAIGMAHLTKGYLQWVSEHGC
GLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFYAAFGNRPNDVFAYR
QVGLPESRIFTVNPRGELIQELIKNHKSTYQRLGEVVELLFPPVVRGPSTDLANPEYSNLCYWR
KPLPCVDFDTLV

hide sequence

RefSeq Acc Id:

XP_006235549 ⟸ XM_006235487

- Peptide Label:

isoform X2

- Sequence:

show sequence

MNYVGQLAETVFGTVKELYRGLNPATLSGGIDVLVVKQVDGSFRCSPFHVRFGKLGVLRSREKV
VDIEINGEPVDLHMKLGDSGEAFFVQELDSDEEDVPPRLCTSPIPWGGLSGFPSDSQLGTASEP
EGLVLTGRRKRRRRRKPRRREDAADSSSEELEAGAESELTLLEKPMPESPSAWKEEEPSSQPKD
IYPYSDGECTPQANLSSADLMSPKSDSELELRPLEPSPLRAESHMQWAWGRLPKVAKAEHPEFS
LVLESMAEAICALPGEPSPSSMAGVDTLRSPALQPGVREDMFHPDVEAYREETPMDSPLAAPES
KETKTQNPRGTGHPPATKSWSWTTPESHTPSGRTEVSRGRASLKRSQHLGPSDIYLDDLPSLDS
ENVALYFPKSDCGMGARRWSEPSNQKLLENPSREHTAECTLDSVDRIELSLCGGLADTRDISLE
KFTQHMVSYEDLTKNPGLLDDPNLVVKINEKHYNWAVAAPMILSLQAFQKNLPESTVDKLQKEK
MPRKGGRWWFSWRRRDFPAEERSAQREKAATRKQQGEKTEVLSSDDDVPDSPVILEVPPLPSST
PGYVPTYKKSLRLSSNQIRCLNLNEGANDVVFSVTTQYQGTCRCKATIYLWNWDDKVVISDIDG
TITKSDALGHILPQLGKDWTHQGITSLYHKIHLNGYKFLYCSARAIGMAHLTKGYLQWVSEHGC
GLPKGPILLSPSSLFSALHREVIEKKPEVFKVACLSDIQQLFLPQRQPFYAAFGNRPNDVFAYR
QVGLPESRIFTVNPRGELIQELIKNHKSTYQRLGEVVELLFPPVVRGPSTDLANPEYSNLCYWR
KPLPCVDFDTLV

hide sequence

Ensembl Acc Id:

ENSRNOP00000022403 ⟸ ENSRNOT00000022403

RefSeq Acc Id:	XP_038961443 ⟸ XM_039105515
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961447 ⟸ XM_039105519
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961449 ⟸ XM_039105521
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961445 ⟸ XM_039105517
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961444 ⟸ XM_039105516
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038961442 ⟸ XM_039105514
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000081644 ⟸ ENSRNOT00000111332

Ensembl Acc Id:

ENSRNOP00000096250 ⟸ ENSRNOT00000095845

RefSeq Acc Id:	XP_063140260 ⟸ XM_063284190
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140263 ⟸ XM_063284193
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063140267 ⟸ XM_063284197
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063140265 ⟸ XM_063284195
- Peptide Label:	isoform X2
- UniProtKB:	F1LMI0 (UniProtKB/TrEMBL), Q5EBA5 (UniProtKB/TrEMBL), A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140262 ⟸ XM_063284192
- Peptide Label:	isoform X1
- UniProtKB:	A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140266 ⟸ XM_063284196
- Peptide Label:	isoform X2
- UniProtKB:	F1LMI0 (UniProtKB/TrEMBL), Q5EBA5 (UniProtKB/TrEMBL), A0A8J8YGA4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063140268 ⟸ XM_063284198
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063140264 ⟸ XM_063284194
- Peptide Label:	isoform X2
- UniProtKB:	F1LMI0 (UniProtKB/TrEMBL), Q5EBA5 (UniProtKB/TrEMBL), A0A8J8YGA4 (UniProtKB/TrEMBL)

Protein Domains

LNS2/PITP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q5EBA5-F1-model_v2	AlphaFold	Q5EBA5	1-844	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1588534	AgrOrtholog
BioCyc Gene	G2FUF-46964	BioCyc
BioCyc Pathway	PWY-7782 [plasmalogen biosynthesis]	BioCyc
	PWY-8052 [2-arachidonoylglycerol biosynthesis]	BioCyc
	PWY-8053 [anandamide biosynthesis II]	BioCyc
	TRIGLSYN-PWY [diacylglycerol and triacylglycerol biosynthesis]	BioCyc
BioCyc Pathway Image	PWY-7782	BioCyc
	PWY-8052	BioCyc
	PWY-8053	BioCyc
	TRIGLSYN-PWY	BioCyc
Ensembl Genes	ENSRNOG00000016636	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022403.7	UniProtKB/TrEMBL
	ENSRNOT00000095845	ENTREZGENE
	ENSRNOT00000095845.2	UniProtKB/TrEMBL
	ENSRNOT00000111332.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1000	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7326188	IMAGE-MGC_LOAD
InterPro	HAD-like_sf	UniProtKB/TrEMBL
	HAD_sf	UniProtKB/TrEMBL
	LIPIN	UniProtKB/TrEMBL
	Lipin_mid	UniProtKB/TrEMBL
	Lipin_N	UniProtKB/TrEMBL
	LNS2	UniProtKB/TrEMBL
	LNS2/PITP	UniProtKB/TrEMBL
KEGG Report	rno:362261	UniProtKB/TrEMBL
MGC_CLONE	MGC:109016	IMAGE-MGC_LOAD
NCBI Gene	362261	ENTREZGENE
PANTHER	PHOSPHATIDATE PHOSPHATASE LPIN3	UniProtKB/TrEMBL
	PTHR12181	UniProtKB/TrEMBL
Pfam	Lipin_mid	UniProtKB/TrEMBL
	Lipin_N	UniProtKB/TrEMBL
	LNS2	UniProtKB/TrEMBL
PhenoGen	Lpin3	PhenoGen
RatGTEx	ENSRNOG00000016636	RatGTEx
SMART	LNS2	UniProtKB/TrEMBL
Superfamily-SCOP	HAD-like_dom	UniProtKB/TrEMBL
UniProt	A0A8I6AUU1_RAT	UniProtKB/TrEMBL
	A0A8I6G885_RAT	UniProtKB/TrEMBL
	A0A8J8YGA4	ENTREZGENE, UniProtKB/TrEMBL
	F1LMI0	ENTREZGENE
	Q5EBA5	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	F1LMI0	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-03-05	Lpin3	lipin 3	LOC362261	similar to lipin 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-11-19	LOC362261	similar to lipin 3			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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